View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4657_low_20 (Length: 285)
Name: NF4657_low_20
Description: NF4657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4657_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 15 - 268
Target Start/End: Complemental strand, 41424808 - 41424555
Alignment:
| Q |
15 |
aacacagacaaagacaaatgctgcactaccactccatccaaacacacagcaagggcgtcacgttgtggtggtcctcttcacctcattgttttaaatttca |
114 |
Q |
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| T |
41424808 |
aacacagacaaagacaaatgctgcactaccactccgtccaaacacacagcaagggcgtcacgttgtggtggtcctcttcacctcattgttttaaatttca |
41424709 |
T |
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| Q |
115 |
tgtgctgcggggaggcggaattttttattatttagtccttatcatgctattctttttcaattaattatgttaatttgaaatattcttttaaaaagcaaaa |
214 |
Q |
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| T |
41424708 |
tgtgctgcggggaggcggaattttttattatttagtccttatcatgctattctttttcaattaattatgttaatttgaaatattcttttaaaaagcaaaa |
41424609 |
T |
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| Q |
215 |
ctagttcattgaaattgaaaccgagaagaattaaacatgagacattgaacagaa |
268 |
Q |
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| T |
41424608 |
ctagttcattgaaattgaaaccgagaagaattaaacacgagacattgaacagaa |
41424555 |
T |
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