View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4657_low_35 (Length: 234)
Name: NF4657_low_35
Description: NF4657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4657_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 7 - 222
Target Start/End: Original strand, 37111980 - 37112195
Alignment:
| Q |
7 |
tccacagaattaccacccctggtaggatcttggacaagcataccactgcgacaatgaaaacaaaaggtacattaaaaggacttttagcttattgaaacct |
106 |
Q |
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| T |
37111980 |
tccacagaattaccacccctggtaggatcttggacaagcataccgctgcgacaatgaaaacaaaaggtacattaaaaggacttttagcttattgaaacct |
37112079 |
T |
|
| Q |
107 |
gtcaattacatcaaataaaaataagttccagtatgagcctctaactaattgcaactgtcaatataatacaactatacaatacctcactaaacaataagtc |
206 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
37112080 |
gtcaattacatcaaataaaaataagttccaggatgagcctctaactaattgcaactgtcaatataatacaactatacaatacctcacaaaacaataagtc |
37112179 |
T |
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| Q |
207 |
tttctaagttaagggt |
222 |
Q |
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|||||||||||||||| |
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| T |
37112180 |
tttctaagttaagggt |
37112195 |
T |
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