View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4658-Insertion-16 (Length: 413)
Name: NF4658-Insertion-16
Description: NF4658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4658-Insertion-16 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 8 - 413
Target Start/End: Original strand, 32373153 - 32373556
Alignment:
| Q |
8 |
catacttctcatttccctctcagcattatctcttcttgaatattccaacatcttctcatgtaactcatcaaccatagcaaatatcacaaggttgaaatag |
107 |
Q |
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| T |
32373153 |
catacttctcatttccctctcagcattatctcttcttgaatattccaacatcttctcatgtaactcatcaaccatagcaaatatcacaaggttgaaatag |
32373252 |
T |
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| Q |
108 |
cttatacaatttgatgatgtatatagcatttcttcagctaagttgaaacttttgtgaagtgaatatactgcatggtttcttatctcttcttgtcttgata |
207 |
Q |
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| T |
32373253 |
cttatacaatttgatgatgtatatagcatttcttcagctaagttgaaacttttgtgaagtgaatatactgcatggtttcttatctcttcttgtcttgata |
32373352 |
T |
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| Q |
208 |
aacttgttcttctaaatatttcaccaagtttcacaaacaaattcatgttatagtttgcactagaaggacctcgaaaattgtcttcagctgatgaactact |
307 |
Q |
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| T |
32373353 |
aacttgttcttctaaata-ttcaccaag-ttcacaaacaaattcatgttatagtttgcactagaaggacctcgaaaattgtcttcagctgatgaactact |
32373450 |
T |
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| Q |
308 |
tgtgttgcttactacactgacattactacctggatctgtatattgtgttctctgccattgaactaacaagtttgtcgaatcggctaaaagatctaatatc |
407 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32373451 |
tgtgttgcttactacactgacattactacctggatctgtatattgtgttctctgccattgaaccaacaagtttgtcgaatcggctaaaagatctaatatc |
32373550 |
T |
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| Q |
408 |
ttcttt |
413 |
Q |
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| T |
32373551 |
ttcttt |
32373556 |
T |
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