View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4659-Insertion-1 (Length: 1024)

Name: NF4659-Insertion-1
Description: NF4659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4659-Insertion-1
NF4659-Insertion-1
[»] chr4 (8 HSPs)
chr4 (350-1022)||(17657923-17658589)
chr4 (8-315)||(17658619-17658928)
chr4 (944-995)||(38382024-38382074)
chr4 (931-993)||(33659802-33659862)
chr4 (944-993)||(25856060-25856108)
chr4 (952-993)||(34321432-34321472)
chr4 (944-993)||(42013188-42013236)
chr4 (948-997)||(46462426-46462474)
[»] chr1 (8 HSPs)
chr1 (931-1002)||(41563027-41563096)
chr1 (939-993)||(38824341-38824394)
chr1 (944-997)||(6394662-6394714)
chr1 (944-997)||(19175630-19175682)
chr1 (944-997)||(29070659-29070711)
chr1 (944-997)||(29070663-29070715)
chr1 (944-993)||(31909791-31909839)
chr1 (944-993)||(45239041-45239089)
[»] chr7 (5 HSPs)
chr7 (948-1002)||(27163211-27163264)
chr7 (939-997)||(8169143-8169199)
chr7 (939-997)||(21387613-21387670)
chr7 (939-997)||(43813162-43813219)
chr7 (944-997)||(6182958-6183010)
[»] chr5 (6 HSPs)
chr5 (939-997)||(2673893-2673950)
chr5 (939-995)||(1100105-1100160)
chr5 (939-997)||(12295722-12295779)
chr5 (939-993)||(37685020-37685073)
chr5 (944-993)||(15965998-15966046)
chr5 (944-997)||(19216332-19216384)
[»] chr3 (1 HSPs)
chr3 (907-995)||(611589-611673)
[»] chr8 (3 HSPs)
chr8 (939-998)||(6189679-6189737)
chr8 (931-993)||(5419545-5419605)
chr8 (939-997)||(36308038-36308094)
[»] scaffold1266 (1 HSPs)
scaffold1266 (939-997)||(176-233)
[»] chr6 (2 HSPs)
chr6 (939-997)||(14173427-14173484)
chr6 (939-997)||(14177963-14178020)
[»] scaffold0635 (1 HSPs)
scaffold0635 (944-993)||(5430-5478)
[»] scaffold0111 (1 HSPs)
scaffold0111 (944-993)||(38057-38105)
[»] chr2 (1 HSPs)
chr2 (944-993)||(10041592-10041640)


Alignment Details
Target: chr4 (Bit Score: 494; Significance: 0; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 350 - 1022
Target Start/End: Complemental strand, 17658589 - 17657923
Alignment:
Q  350 gcgtctatcacgttcatacaagtttgtctgacaaacctgtttaccccaaccagtgccgtattcatatccataagaagcaacatgaatagcttcctcaaca 449  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17658589 gcgtctatcacgtttgtacaagtttgtatgacaaacctgtttaccccaacccgtgccgtattcatatccataagaagcaacatgaatagcttcctcaaca 17658490  T
Q  450 gctttgttaacactaatatcgctagctgaataggtcctatcttccaaagcatgaccaactgatttcataagttcctttgaagttccaaatttttgtttta 549  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17658489 gctttgttaacactaatatcgctagctgaataggtcctatcttccaaagcatgaccaactgatttcataagttcctttgaagttccaaatttttgtttta 17658390  T
Q  550 actccacttcagataagttgtttcctgcaacattggtttgagagtgtagggtaaccaaaaaacagtcaaaacatgatagaaaaaccctaattaaattcgt 649  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17658389 actccacttcagataagttgtttcctgcaacattggtttgagagtgtagggtaaccaaaaaacagtcaaaacatgatagaaaaaccctaattaaattcgt 17658290  T
Q  650 aacatat--atatgtacccttttctacatcgtccggagagaggccatgaataacttttcttctatgaaagcagttcgttcctccatagaaaattccttgc 747  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17658289 aacatatatatatgtacccttttctacatcgtccggagagaggccataaataacttttcttctatgaaagcagttcgttcctccatagaaaattccttgc 17658190  T
Q  748 agtcctgctaatcctgctccaagggtactgtaatttacattagttaaaaattgaattgataaaattaaatgagtaatgaaatgaactaacttattcataa 847  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  17658189 agtcctgctaatcctgctccaa-ggtactgtaatttacattagttaaaaattgaattgataaaatt-aatgagtaat-aaatgaaataacttattcataa 17658093  T
Q  848 aacatcccaacttaattaagatagtaaattaacaaagcttaatttactacaccattcgatcactgttataggtaaaactttggttttttaggattaattc 947  Q
    ||||| |||||    |||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||||  ||||||| |||| ||||    
T  17658092 aacat-ccaac----ttaagatagt-aattaacaaaggttaa-ttactacaccattcgatcattgttataagtaaaacttt-atttttta-gattcattc 17658002  T
Q  948 aataaatgatgtatggtagtctat------attatcaaccacatacatcatttattcagtggaaccaaatatgtgagtttt 1022  Q
    |||||||||| ||| |||||||||      ||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  17658001 aataaatgatatat-gtagtctatattatcattatcaactacatacatcatttattcaat-gaaccaaatatgtgagtttt 17657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 8 - 315
Target Start/End: Complemental strand, 17658928 - 17658619
Alignment:
Q  8 caaaaataggacaatgtttgctaaagaagatctcgagcattccggtggcccatctcttatgttgagccatacaggtggggccatcaattggagcacaacc 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17658928 caaaaacaggacaatgtttgctaaagaagatctcgagcattccggtggcccatctcttatgttgagccatacaggtggggccatcaattggagcacaacc 17658829  T
Q  108 tgtgaaggctattggatccggtgtacataattccgatctccaaccttttttgtgtatcgtcaacccagttagtatatcttctgtcattgttccatacatc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  17658828 tgtgaaggctattggatccggtgtacataattccgatctccaaccttttttgtgtatcgtcagcccagttagtatatcttcagtcattgttccatacatc 17658729  T
Q  208 caacccacctaaaattccaataagatcaattcaatttcctgttatag--cnnnnnnnnaaacaaccaaaatttattaaccgctacatctgcacaagacgc 305  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||    
T  17658728 caacccacctaaaattccaacaagatcaatccaatttcctgttatagttttttttttgaaacaaccaaaatttattaaccgctacatctgcacaagacgc 17658629  T
Q  306 atagagcaag 315  Q
    | ||||||||    
T  17658628 acagagcaag 17658619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 944 - 995
Target Start/End: Complemental strand, 38382074 - 38382024
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcattta 995  Q
    ||||| ||||||||||||| |||||| |||||| ||||||||||||||||||    
T  38382074 attcattaaatgatgtatg-tagtctgtattataaaccacatacatcattta 38382024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 931 - 993
Target Start/End: Original strand, 33659802 - 33659862
Alignment:
Q  931 ttttttaggattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||||| || ||||||| ||||||||||| |||| |||||||| ||||||||||||||||    
T  33659802 ttttttagg-ttcattcaattaatgatgtatg-tagtatatattatgaaccacatacatcatt 33659862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 993
Target Start/End: Complemental strand, 25856108 - 25856060
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  25856108 attcaattaatgatgtatg-tggtctatattatgaaccacatacatcatt 25856060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 952 - 993
Target Start/End: Complemental strand, 34321472 - 34321432
Alignment:
Q  952 aatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  34321472 aatgatgtatg-tagtctatattatgaaccacatacatcatt 34321432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 993
Target Start/End: Original strand, 42013188 - 42013236
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  42013188 attcaattaatgatgtatg-tggtctatattataaaccacatacatcatt 42013236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 948 - 997
Target Start/End: Complemental strand, 46462474 - 46462426
Alignment:
Q  948 aataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    ||||||||||||||| |||||| |||||| ||||| ||||||||||||||    
T  46462474 aataaatgatgtatg-tagtctttattataaaccatatacatcatttatt 46462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 931 - 1002
Target Start/End: Original strand, 41563027 - 41563096
Alignment:
Q  931 ttttttaggattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttattcagtg 1002  Q
    ||||||||| || ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||    
T  41563027 ttttttagg-ttcattcaataaatgatgtatg-tagtccatattataaaccacatacatcatttattgagtg 41563096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 993
Target Start/End: Complemental strand, 38824394 - 38824341
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    |||| ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  38824394 gattcattcaattaatgatgtatg-tggtctatattatgaaccacatacatcatt 38824341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 997
Target Start/End: Complemental strand, 6394714 - 6394662
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    ||||||||||||||||||| || |||| ||||| ||| ||||||||||||||||    
T  6394714 attcaataaatgatgtatg-taatctacattataaactacatacatcatttatt 6394662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 997
Target Start/End: Original strand, 19175630 - 19175682
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    ||||||||||||||||||| | |||||| | || ||||||||||||||||||||    
T  19175630 attcaataaatgatgtatg-tggtctatttaatgaaccacatacatcatttatt 19175682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 997
Target Start/End: Original strand, 29070659 - 29070711
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    ||||||||||||||||||| | ||||||| |||  |||||||||||||||||||    
T  29070659 attcaataaatgatgtatg-tggtctataatatggaccacatacatcatttatt 29070711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 997
Target Start/End: Complemental strand, 29070715 - 29070663
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    ||||||||||||||||||| | ||| |||||||  |||||||||||||||||||    
T  29070715 attcaataaatgatgtatg-tggtccatattatagaccacatacatcatttatt 29070663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 993
Target Start/End: Original strand, 31909791 - 31909839
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  31909791 attcaattaatgatgtatg-tggtctatattataaaccacatacatcatt 31909839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 993
Target Start/End: Complemental strand, 45239089 - 45239041
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  45239089 attcaattaatgatgtatg-tggtctatattatgaaccacatacatcatt 45239041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000004; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 948 - 1002
Target Start/End: Original strand, 27163211 - 27163264
Alignment:
Q  948 aataaatgatgtatggtagtctatattatcaaccacatacatcatttattcagtg 1002  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||    
T  27163211 aataaatgatgtatg-tggtctatattataaaccacatacatcatttatttagtg 27163264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 997
Target Start/End: Complemental strand, 8169199 - 8169143
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| |||||||||||||||||| |||||||||| |||  |||||||||||||||||||    
T  8169199 gattcattcaataaatgatgtat-gtagtctata-tatagaccacatacatcatttatt 8169143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 997
Target Start/End: Original strand, 21387613 - 21387670
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| ||||||| ||||||||||| |||||| ||||||  |||||||||||||||||||    
T  21387613 gattcattcaattaatgatgtatg-tagtctttattatataccacatacatcatttatt 21387670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 997
Target Start/End: Original strand, 43813162 - 43813219
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| ||||||||||||| ||||| ||||||||| |||  |||||||||||||||||||    
T  43813162 gattcattcaataaatgaagtatg-tagtctataatattgaccacatacatcatttatt 43813219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 997
Target Start/End: Original strand, 6182958 - 6183010
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    ||||||||||||||||| | | ||||||||||| |||| |||||||||||||||    
T  6182958 attcaataaatgatgtacgtt-gtctatattataaaccgcatacatcatttatt 6183010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000004; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 939 - 997
Target Start/End: Complemental strand, 2673950 - 2673893
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| ||||||||||||||| ||| |||||||||||||  |||||||||||||||||||    
T  2673950 gatttattcaataaatgatgcatg-tagtctatattatagaccacatacatcatttatt 2673893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 939 - 995
Target Start/End: Complemental strand, 1100160 - 1100105
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcattta 995  Q
    |||||||||| ||||||||||||| |||||| ||||||  |||||||||||||||||    
T  1100160 gattaattcattaaatgatgtatg-tagtctttattatagaccacatacatcattta 1100105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 997
Target Start/End: Complemental strand, 12295779 - 12295722
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| ||||||||||| ||||||| ||||||||||||| ||| |||||||| |||||||    
T  12295779 gattcattcaataaataatgtatg-tagtctatattataaacgacatacataatttatt 12295722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 993
Target Start/End: Complemental strand, 37685073 - 37685020
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    |||| ||||||| ||| ||||||| ||||||||||||| ||||||||||||||||    
T  37685073 gattcattcaattaataatgtatg-tagtctatattatgaaccacatacatcatt 37685020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 993
Target Start/End: Original strand, 15965998 - 15966046
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  15965998 attcaattaatgatgtatg-tggtctatattataaaccacatacatcatt 15966046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 997
Target Start/End: Complemental strand, 19216384 - 19216332
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    ||||||||||||||| ||| |||||||||||||  ||||||| |||||||||||    
T  19216384 attcaataaatgatgcatg-tagtctatattatggaccacatgcatcatttatt 19216332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 907 - 995
Target Start/End: Original strand, 611589 - 611673
Alignment:
Q  907 tcactgttataggtaaaactttggttttttaggattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcattta 995  Q
    ||||| ||||| |||||| |||| |||||||| |||||||||||||||||||||| |||||||||| |||  ||||||||||| |||||    
T  611589 tcactattataagtaaaagtttg-ttttttag-attaattcaataaatgatgtat-gtagtctata-tatagaccacatacattattta 611673  T

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Target: chr8 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 939 - 998
Target Start/End: Complemental strand, 6189737 - 6189679
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttattc 998  Q
    |||| ||||||||||||||||||  |||||||||||||  |||| |||||||||||||||    
T  6189737 gattcattcaataaatgatgtatt-tagtctatattattgaccaaatacatcatttattc 6189679  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 931 - 993
Target Start/End: Original strand, 5419545 - 5419605
Alignment:
Q  931 ttttttaggattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||||| || ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||    
T  5419545 ttttttagg-ttcattcaatcaatgatgtatg-tagtccatattatgaaccacatacatcatt 5419605  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 997
Target Start/End: Complemental strand, 36308094 - 36308038
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| |||||||||||||||||||  ||||||||| || ||||||||||||||||||||    
T  36308094 gattcattcaataaatgatgtatgc-agtctatat-atgaaccacatacatcatttatt 36308038  T

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Target: scaffold1266 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 997
Target Start/End: Complemental strand, 233 - 176
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| ||||||||||||||||||| | ||||||| ||| |||||||||||| |||||||    
T  233 gattcattcaataaatgatgtatg-tggtctataatatgaaccacatacataatttatt 176  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000009; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 997
Target Start/End: Original strand, 14173427 - 14173484
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| ||||||||||||| ||||| ||||||||| |||  |||||||||||||||||||    
T  14173427 gattcattcaataaatgaagtatg-tagtctataatattgaccacatacatcatttatt 14173484  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 939 - 997
Target Start/End: Original strand, 14177963 - 14178020
Alignment:
Q  939 gattaattcaataaatgatgtatggtagtctatattatcaaccacatacatcatttatt 997  Q
    |||| ||||||||||||| ||||| ||||||||| |||  |||||||||||||||||||    
T  14177963 gattcattcaataaatgaagtatg-tagtctataatattgaccacatacatcatttatt 14178020  T

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Target: scaffold0635 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 993
Target Start/End: Original strand, 5430 - 5478
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  5430 attcaattaatgatgtatg-tggtctatattataaaccacatacatcatt 5478  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 993
Target Start/End: Complemental strand, 38105 - 38057
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  38105 attcaattaatgatgtatg-tggtctatattatgaaccacatacatcatt 38057  T

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Target: chr2 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 944 - 993
Target Start/End: Complemental strand, 10041640 - 10041592
Alignment:
Q  944 attcaataaatgatgtatggtagtctatattatcaaccacatacatcatt 993  Q
    ||||||| ||||||||||| | ||||||||||| ||||||||||||||||    
T  10041640 attcaattaatgatgtatg-tggtctatattataaaccacatacatcatt 10041592  T

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