View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4659_high_8 (Length: 266)

Name: NF4659_high_8
Description: NF4659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4659_high_8
NF4659_high_8
[»] chr5 (45 HSPs)
chr5 (1-264)||(1457070-1457334)
chr5 (1-264)||(43592191-43592456)
chr5 (1-264)||(27449726-27449991)
chr5 (1-264)||(27444882-27445147)
chr5 (1-264)||(43598636-43598901)
chr5 (1-264)||(43604128-43604393)
chr5 (1-264)||(43609620-43609885)
chr5 (1-264)||(30631319-30631584)
chr5 (1-264)||(15044599-15044862)
chr5 (4-253)||(31180138-31180388)
chr5 (3-264)||(28807485-28807748)
chr5 (3-256)||(37556533-37556788)
chr5 (3-256)||(37561355-37561610)
chr5 (1-215)||(38192135-38192350)
chr5 (1-215)||(38219360-38219575)
chr5 (1-215)||(24135809-24136025)
chr5 (3-250)||(2785302-2785550)
chr5 (3-250)||(33791243-33791491)
chr5 (1-215)||(35387624-35387839)
chr5 (3-243)||(31396901-31397144)
chr5 (44-187)||(33768169-33768314)
chr5 (3-243)||(31401758-31402001)
chr5 (82-177)||(9353332-9353429)
chr5 (82-177)||(36932350-36932447)
chr5 (1-177)||(15464532-15464709)
chr5 (82-177)||(10281751-10281849)
chr5 (82-176)||(11916971-11917068)
chr5 (82-177)||(14520230-14520327)
chr5 (92-177)||(17003970-17004057)
chr5 (82-177)||(3880299-3880397)
chr5 (82-174)||(12084175-12084269)
chr5 (82-177)||(19588746-19588844)
chr5 (82-177)||(28832259-28832356)
chr5 (82-177)||(42127410-42127507)
chr5 (114-173)||(4410241-4410301)
chr5 (98-177)||(31300612-31300693)
chr5 (114-173)||(15552464-15552524)
chr5 (114-173)||(31179371-31179431)
chr5 (114-173)||(31542953-31543013)
chr5 (114-173)||(31545299-31545359)
chr5 (120-173)||(27910675-27910729)
chr5 (82-177)||(24553507-24553603)
chr5 (114-173)||(3373137-3373197)
chr5 (114-173)||(10749919-10749979)
chr5 (114-173)||(15354575-15354635)
[»] chr8 (34 HSPs)
chr8 (1-264)||(6311210-6311474)
chr8 (1-264)||(7289834-7290099)
chr8 (1-264)||(36979291-36979555)
chr8 (1-194)||(25328187-25328379)
chr8 (1-264)||(30655555-30655824)
chr8 (1-264)||(33037726-33037989)
chr8 (1-264)||(4759994-4760259)
chr8 (1-262)||(18853086-18853349)
chr8 (1-262)||(18870480-18870743)
chr8 (1-253)||(10689061-10689315)
chr8 (3-194)||(39784734-39784924)
chr8 (3-250)||(35745318-35745566)
chr8 (1-215)||(1261874-1262089)
chr8 (1-212)||(31071149-31071362)
chr8 (3-237)||(10684174-10684410)
chr8 (95-212)||(26287866-26287985)
chr8 (95-212)||(26301123-26301242)
chr8 (95-212)||(26313117-26313236)
chr8 (92-177)||(26403240-26403327)
chr8 (82-177)||(4456028-4456125)
chr8 (82-211)||(7412305-7412438)
chr8 (82-177)||(19175754-19175851)
chr8 (82-177)||(23799576-23799674)
chr8 (95-177)||(4696609-4696693)
chr8 (82-174)||(6127224-6127319)
chr8 (82-177)||(5702482-5702580)
chr8 (114-175)||(9765852-9765914)
chr8 (82-177)||(19752394-19752491)
chr8 (114-173)||(43079877-43079937)
chr8 (114-173)||(43082248-43082308)
chr8 (111-177)||(6813683-6813750)
chr8 (114-147)||(18810982-18811015)
chr8 (82-156)||(9054836-9054912)
chr8 (114-173)||(44721118-44721178)
[»] scaffold0355 (3 HSPs)
scaffold0355 (1-264)||(9552-9812)
scaffold0355 (1-91)||(3757-3845)
scaffold0355 (203-264)||(1-59)
[»] chr4 (39 HSPs)
chr4 (1-264)||(51520369-51520634)
chr4 (1-264)||(9224315-9224579)
chr4 (1-260)||(3813940-3814199)
chr4 (1-264)||(9229102-9229366)
chr4 (1-264)||(24741854-24742118)
chr4 (1-194)||(45347725-45347918)
chr4 (46-264)||(56146664-56146884)
chr4 (1-194)||(45357205-45357397)
chr4 (3-264)||(18855638-18855900)
chr4 (1-261)||(29760558-29760820)
chr4 (2-177)||(5732666-5732839)
chr4 (95-212)||(28468542-28468660)
chr4 (1-211)||(31985555-31985764)
chr4 (82-177)||(10047379-10047477)
chr4 (82-177)||(39245994-39246092)
chr4 (82-177)||(36315229-36315326)
chr4 (82-177)||(36329438-36329535)
chr4 (82-177)||(16623292-16623390)
chr4 (82-177)||(5396671-5396768)
chr4 (92-177)||(38152449-38152536)
chr4 (82-177)||(3796518-3796616)
chr4 (93-176)||(5143260-5143345)
chr4 (95-177)||(5269204-5269288)
chr4 (93-176)||(5147678-5147763)
chr4 (82-176)||(3777550-3777646)
chr4 (92-177)||(24333809-24333896)
chr4 (92-172)||(6743425-6743507)
chr4 (82-173)||(16630679-16630773)
chr4 (114-173)||(16931789-16931849)
chr4 (114-173)||(16934143-16934203)
chr4 (114-173)||(22780373-22780433)
chr4 (1-49)||(28468458-28468506)
chr4 (82-156)||(39774304-39774380)
chr4 (114-173)||(44599838-44599898)
chr4 (93-177)||(54867184-54867269)
chr4 (114-173)||(6765117-6765177)
chr4 (114-173)||(7941596-7941656)
chr4 (114-173)||(18709164-18709224)
chr4 (114-173)||(22782738-22782798)
[»] chr6 (36 HSPs)
chr6 (1-262)||(22010605-22010867)
chr6 (1-264)||(11856884-11857151)
chr6 (1-264)||(28184417-28184681)
chr6 (1-264)||(14742345-14742608)
chr6 (1-264)||(14737485-14737749)
chr6 (1-256)||(28155479-28155735)
chr6 (3-264)||(6438412-6438674)
chr6 (1-215)||(5674688-5674905)
chr6 (3-250)||(6005344-6005592)
chr6 (1-250)||(16838671-16838921)
chr6 (1-242)||(33330353-33330596)
chr6 (1-242)||(33335850-33336093)
chr6 (82-177)||(5757478-5757575)
chr6 (95-211)||(22708984-22709102)
chr6 (82-177)||(21356036-21356133)
chr6 (82-177)||(5572240-5572338)
chr6 (93-177)||(10077176-10077262)
chr6 (82-177)||(31086472-31086570)
chr6 (93-177)||(4629954-4630040)
chr6 (82-177)||(31979513-31979611)
chr6 (132-242)||(5343416-5343527)
chr6 (82-165)||(21801343-21801429)
chr6 (82-177)||(22963700-22963797)
chr6 (82-177)||(23824596-23824693)
chr6 (82-156)||(18232867-18232943)
chr6 (95-177)||(5017482-5017566)
chr6 (114-177)||(31936587-31936651)
chr6 (1-71)||(22709116-22709185)
chr6 (114-173)||(12195515-12195575)
chr6 (114-186)||(5273203-5273276)
chr6 (114-173)||(4816231-4816291)
chr6 (114-173)||(19704567-19704627)
chr6 (114-173)||(20915356-20915416)
chr6 (114-173)||(26932562-26932622)
chr6 (114-173)||(29754709-29754769)
chr6 (114-173)||(33309110-33309170)
[»] chr7 (48 HSPs)
chr7 (1-264)||(12406244-12406508)
chr7 (1-256)||(24024235-24024492)
chr7 (1-264)||(12396824-12397088)
chr7 (1-221)||(31109492-31109713)
chr7 (3-264)||(19992224-19992487)
chr7 (1-264)||(20357466-20357730)
chr7 (3-264)||(21812149-21812412)
chr7 (1-215)||(2057927-2058144)
chr7 (1-215)||(21639770-21639985)
chr7 (1-215)||(1533362-1533579)
chr7 (1-215)||(18408726-18408940)
chr7 (1-215)||(21645968-21646183)
chr7 (88-199)||(4866709-4866820)
chr7 (1-212)||(18413606-18413816)
chr7 (3-237)||(24266112-24266348)
chr7 (3-237)||(24261233-24261469)
chr7 (82-237)||(16880012-16880169)
chr7 (82-237)||(16884868-16885025)
chr7 (82-177)||(29159803-29159901)
chr7 (93-176)||(21983285-21983370)
chr7 (82-177)||(46516309-46516407)
chr7 (82-177)||(49091661-49091759)
chr7 (82-177)||(44848684-44848781)
chr7 (82-177)||(2647695-2647793)
chr7 (82-177)||(33332449-33332547)
chr7 (82-177)||(9190008-9190105)
chr7 (82-177)||(20284089-20284186)
chr7 (82-177)||(55948-56045)
chr7 (82-177)||(2580390-2580487)
chr7 (94-177)||(35960816-35960901)
chr7 (95-177)||(9185178-9185262)
chr7 (114-211)||(28617258-28617356)
chr7 (82-177)||(4796666-4796764)
chr7 (98-177)||(47263678-47263757)
chr7 (94-177)||(2479337-2479421)
chr7 (93-176)||(21988909-21988992)
chr7 (114-173)||(31155911-31155971)
chr7 (114-173)||(1049296-1049356)
chr7 (114-173)||(2935497-2935557)
chr7 (114-173)||(3035953-3036013)
chr7 (114-177)||(5817303-5817366)
chr7 (114-173)||(7351652-7351712)
chr7 (130-177)||(8153466-8153514)
chr7 (114-173)||(9027194-9027254)
chr7 (114-173)||(22108295-22108355)
chr7 (114-173)||(22137306-22137366)
chr7 (114-173)||(40550055-40550115)
chr7 (114-173)||(40552333-40552393)
[»] chr3 (55 HSPs)
chr3 (1-264)||(22173103-22173367)
chr3 (1-264)||(7167157-7167422)
chr3 (1-264)||(28503783-28504039)
chr3 (1-262)||(8738982-8739245)
chr3 (1-262)||(9091220-9091483)
chr3 (1-264)||(2671505-2671769)
chr3 (2-177)||(18656436-18656609)
chr3 (1-215)||(40372715-40372929)
chr3 (1-215)||(8477324-8477542)
chr3 (1-134)||(28501616-28501750)
chr3 (1-250)||(2676995-2677246)
chr3 (4-250)||(2672842-2673090)
chr3 (1-211)||(26928510-26928721)
chr3 (1-211)||(32143287-32143498)
chr3 (3-192)||(8512202-8512392)
chr3 (3-192)||(8517082-8517272)
chr3 (1-250)||(24968034-24968284)
chr3 (1-212)||(1305914-1306125)
chr3 (82-237)||(32475424-32475580)
chr3 (1-211)||(27452924-27453135)
chr3 (82-237)||(32480282-32480438)
chr3 (95-211)||(27986449-27986567)
chr3 (82-177)||(8370476-8370573)
chr3 (82-177)||(27974942-27975039)
chr3 (82-177)||(18552872-18552970)
chr3 (82-177)||(16264350-16264447)
chr3 (82-177)||(21711223-21711320)
chr3 (82-176)||(36029094-36029191)
chr3 (82-174)||(1736294-1736389)
chr3 (82-177)||(30709779-30709877)
chr3 (95-177)||(33386669-33386753)
chr3 (82-177)||(3715991-3716089)
chr3 (1-177)||(6794624-6794800)
chr3 (129-250)||(10207860-10207983)
chr3 (82-177)||(40592771-40592869)
chr3 (82-177)||(48438214-48438312)
chr3 (82-177)||(25795781-25795879)
chr3 (82-177)||(26298988-26299086)
chr3 (95-177)||(1417493-1417577)
chr3 (82-177)||(47923895-47923993)
chr3 (82-177)||(37466291-37466388)
chr3 (153-212)||(1309819-1309878)
chr3 (95-177)||(39039995-39040079)
chr3 (82-177)||(40844652-40844749)
chr3 (82-177)||(3328346-3328443)
chr3 (111-177)||(4386947-4387014)
chr3 (82-177)||(24695153-24695251)
chr3 (114-173)||(38210569-38210629)
chr3 (114-173)||(50494198-50494258)
chr3 (110-173)||(53894055-53894119)
chr3 (82-156)||(3323680-3323755)
chr3 (114-173)||(458483-458543)
chr3 (114-173)||(6063444-6063504)
chr3 (114-173)||(10621528-10621588)
chr3 (130-177)||(39153357-39153405)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-264)||(34970-35234)
[»] chr1 (36 HSPs)
chr1 (1-264)||(41398153-41398412)
chr1 (1-264)||(41390498-41390757)
chr1 (1-264)||(25444998-25445263)
chr1 (1-264)||(24787283-24787547)
chr1 (3-264)||(44023785-44024046)
chr1 (3-264)||(39445411-39445673)
chr1 (3-264)||(1054923-1055185)
chr1 (1-215)||(24202689-24202904)
chr1 (1-212)||(19358763-19358975)
chr1 (1-212)||(19361352-19361564)
chr1 (1-212)||(19379992-19380204)
chr1 (3-194)||(43988372-43988566)
chr1 (82-177)||(26644897-26644994)
chr1 (92-177)||(47703946-47704033)
chr1 (82-177)||(19072928-19073026)
chr1 (82-177)||(19120818-19120916)
chr1 (82-177)||(16124515-16124613)
chr1 (82-177)||(27104371-27104469)
chr1 (82-177)||(3281708-3281805)
chr1 (92-177)||(9476261-9476348)
chr1 (92-177)||(13598398-13598485)
chr1 (1-72)||(25439805-25439875)
chr1 (92-177)||(29651811-29651898)
chr1 (85-177)||(37069770-37069864)
chr1 (92-177)||(775672-775759)
chr1 (82-177)||(13604623-13604720)
chr1 (82-177)||(21536569-21536666)
chr1 (82-177)||(47098824-47098921)
chr1 (82-177)||(32889439-32889536)
chr1 (1-65)||(19366228-19366292)
chr1 (82-174)||(47102841-47102935)
chr1 (114-173)||(9459419-9459479)
chr1 (114-173)||(9463246-9463306)
chr1 (114-173)||(16226386-16226446)
chr1 (114-173)||(23786058-23786118)
chr1 (114-173)||(51752582-51752642)
[»] chr2 (45 HSPs)
chr2 (32-262)||(44312563-44312794)
chr2 (1-199)||(39811897-39812094)
chr2 (1-264)||(11098846-11099110)
chr2 (1-260)||(32246701-32246964)
chr2 (1-264)||(14291402-14291666)
chr2 (1-264)||(9296320-9296584)
chr2 (1-212)||(3491716-3491927)
chr2 (3-250)||(19344347-19344596)
chr2 (3-250)||(19349205-19349454)
chr2 (1-215)||(25398457-25398672)
chr2 (1-215)||(25403595-25403810)
chr2 (95-211)||(40738810-40738926)
chr2 (92-177)||(8040060-8040147)
chr2 (1-147)||(25407653-25407799)
chr2 (82-174)||(13569331-13569426)
chr2 (82-177)||(21629944-21630041)
chr2 (82-177)||(28259177-28259274)
chr2 (82-177)||(10445443-10445541)
chr2 (82-177)||(17865203-17865301)
chr2 (82-177)||(20522220-20522318)
chr2 (82-177)||(34682333-34682431)
chr2 (82-176)||(34388859-34388956)
chr2 (82-177)||(14699007-14699104)
chr2 (82-176)||(10707251-10707348)
chr2 (82-174)||(8390149-8390244)
chr2 (92-177)||(31056044-31056131)
chr2 (82-177)||(33528620-33528718)
chr2 (82-177)||(39482931-39483029)
chr2 (82-177)||(23078470-23078567)
chr2 (82-177)||(42039669-42039766)
chr2 (92-177)||(16940219-16940306)
chr2 (92-177)||(17010884-17010971)
chr2 (93-177)||(33118136-33118222)
chr2 (94-177)||(36757774-36757859)
chr2 (114-187)||(2838063-2838136)
chr2 (114-174)||(1345574-1345635)
chr2 (114-173)||(35215586-35215646)
chr2 (114-173)||(35217963-35218023)
chr2 (82-174)||(2869692-2869787)
chr2 (94-156)||(27149306-27149369)
chr2 (1-71)||(40738940-40739009)
chr2 (117-173)||(45332181-45332238)
chr2 (114-173)||(23452237-23452297)
chr2 (114-173)||(36558864-36558924)
chr2 (114-173)||(36561141-36561201)
[»] scaffold0464 (1 HSPs)
scaffold0464 (3-264)||(274-536)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-215)||(17872-18087)
scaffold0188 (1-215)||(23965-24180)
[»] scaffold0259 (1 HSPs)
scaffold0259 (3-250)||(2161-2409)
[»] scaffold0028 (1 HSPs)
scaffold0028 (3-250)||(148866-149114)
[»] scaffold0197 (2 HSPs)
scaffold0197 (3-237)||(14219-14455)
scaffold0197 (3-250)||(19075-19323)
[»] scaffold0009 (1 HSPs)
scaffold0009 (109-237)||(181980-182110)
[»] scaffold0140 (3 HSPs)
scaffold0140 (82-177)||(8419-8516)
scaffold0140 (114-173)||(22343-22403)
scaffold0140 (114-173)||(24618-24678)
[»] scaffold0978 (1 HSPs)
scaffold0978 (145-264)||(300-419)
[»] scaffold0036 (1 HSPs)
scaffold0036 (82-176)||(85684-85780)
[»] scaffold0087 (2 HSPs)
scaffold0087 (82-177)||(43961-44058)
scaffold0087 (82-177)||(36832-36929)
[»] scaffold0006 (3 HSPs)
scaffold0006 (92-177)||(5683-5770)
scaffold0006 (92-177)||(2492-2579)
scaffold0006 (82-177)||(133280-133377)
[»] scaffold0148 (1 HSPs)
scaffold0148 (82-177)||(10729-10827)
[»] scaffold0098 (1 HSPs)
scaffold0098 (95-177)||(45253-45337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (82-174)||(17266-17361)
[»] scaffold0267 (1 HSPs)
scaffold0267 (114-173)||(269-329)
[»] scaffold0154 (1 HSPs)
scaffold0154 (114-147)||(11500-11533)
[»] scaffold0025 (1 HSPs)
scaffold0025 (114-173)||(69292-69352)


Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 1457070 - 1457334
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1457070 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 1457169  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457170 cactttctcatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 1457269  T
Q  201 ttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    || |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  1457270 tttcttatcttgtttatgctttgttatctctttgtgtggttttgctatacactagtctagggctg 1457334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 43592456 - 43592191
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  43592456 tagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 43592357  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43592356 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttt 43592257  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
     |  |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  43592256 atcacttatcttgtttatgctttgttatctctttgtgtggttttgctatacactagtctagggctg 43592191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 27449991 - 27449726
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  27449991 tagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 27449892  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27449891 cactttctcatattggattggagagctgctctctcccccagattaggctatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttt 27449792  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
     |  |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  27449791 atcacttatcttgtttatgctttgttatctctttgtgtggttttgctatacactagtctagggctg 27449726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 27445147 - 27444882
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  27445147 tagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 27445048  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  27445047 cactttctcatattggattggagagctgctctctcccccagattaggctatattgcctgaactgggtcaacaatcttctcggtgttttgttcttcctttt 27444948  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
     |  |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  27444947 atcacttatcttgtttatgctttgttatctctttgtgtggttttgctatacactagtctagggctg 27444882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 43598901 - 43598636
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  43598901 tagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 43598802  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||    
T  43598801 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatcttctcggtgttttgttcttcctttt 43598702  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
     |  |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  43598701 atcacttatcttgtttatgctttgttatctctttgtgtggttttgctatacactagtctagggctg 43598636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 43604393 - 43604128
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  43604393 tagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 43604294  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||    
T  43604293 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatcttctcggtgttttgttcttcctttt 43604194  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
     |  |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  43604193 atcacttatcttgtttatgctttgttatctctttgtgtggttttgctatacactagtctagggctg 43604128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 43609885 - 43609620
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  43609885 tagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 43609786  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||    
T  43609785 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatcttctcggtgttttgttcttcctttt 43609686  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
     |  |||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  43609685 atcacttatcttgtttatgctttgttatctctttgtgtggttttgctatacactagtctagggctg 43609620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 30631584 - 30631319
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| || ||||||| ||||||||| ||||||    
T  30631584 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctatggtttgttcatgtgtaaagcttgaaggctagagtttcttgtaaccctttgta 30631485  T
Q  100 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  30631484 acactttctcatattggattggagagctgctctctcccccagattaggccacattggctgaactgagtcaacaatcttcttggtgttttgttcttccttt 30631385  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||| |||||||||||||||| |||||| || | | |||| ||||| ||||||||||||||||||||    
T  30631384 cttacttatcttgtttatgctttgttatctatatatgtgattttgctatacactagtctagggctg 30631319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 15044862 - 15044599
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||    
T  15044862 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaa 15044764  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  15044763 cactttctcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctttt 15044664  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |||||||||||||||||||| |||  | ||| ||||||| ||||| ||||||||||||||||||||    
T  15044663 cttgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagtctagggctg 15044599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 253
Target Start/End: Complemental strand, 31180388 - 31180138
Alignment:
Q  4 ggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgtaaca 102  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| || ||||||| ||||||||| |||||||||    
T  31180388 ggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaaggctagagtttcttgtaaccctttgtaaca 31180290  T
Q  103 ctttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttctt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  31180289 ctttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttctttctttctt 31180190  T
Q  203 gcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacacta 253  Q
     |||||||||||||||| |||||| ||||||||||| ||||| |||||||||    
T  31180189 tcttatcttgtttatgctttgttatctctttgtgtggttttgctatacacta 31180138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 264
Target Start/End: Original strand, 28807485 - 28807748
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaaca 102  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  | |||| |||||||||||||||||||||    
T  28807485 gggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctaga-ttcttgtaaccttttgtaaca 28807582  T
Q  103 ctttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--ccttt 199  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  | |||    
T  28807583 ctt-cacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcctttt 28807681  T
Q  200 cttgcttatcttgtttatgcttgttagctctttgtgtg--cttttgttatacactagtctagggctg 264  Q
       | ||||||||||||||||||||||||||||| |||   ||||| ||||||||||  ||||||||    
T  28807682 accgtttatcttgtttatgcttgttagctctttgagtggttttttgctatacactagcttagggctg 28807748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 37556533 - 37556788
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||| | ||||||||||||||||||    
T  37556533 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgataagctaga-tacttgtaaccttttgtaac 37556630  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctt 198  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  37556631 actttcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccatt 37556730  T
Q  199 tcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtc 256  Q
    |   | ||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||    
T  37556731 taccgtttatcttgtttatgcttgttagctcttagtgtggttttgctatacacaagtc 37556788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 37561355 - 37561610
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||| | ||||||||||||||||||    
T  37561355 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgataagctaga-tacttgtaaccttttgtaac 37561452  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctt 198  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  37561453 actttcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccatt 37561552  T
Q  199 tcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtc 256  Q
    |   | ||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||    
T  37561553 taccgtttatcttgtttatgcttgttagctcttagtgtggttttgctatacacaagtc 37561610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 38192350 - 38192135
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  38192350 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 38192252  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  38192251 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttcctt 38192152  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  38192151 tcttgcttatcttgttt 38192135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 38219575 - 38219360
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  38219575 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 38219477  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  38219476 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttcctt 38219377  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  38219376 tcttgcttatcttgttt 38219360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 24136025 - 24135809
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  24136025 tagggttcacattgtgagagtggggaaacaccaaagggtagaatctaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 24135927  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcc-t 197  Q
    ||||||| || || || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |    
T  24135926 cactttcatcttagtgcattggatagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgtgtttgttcttcctt 24135827  T
Q  198 ttcttgcttatcttgttt 215  Q
    |||| |||||||||||||    
T  24135826 ttctagcttatcttgttt 24135809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 2785550 - 2785302
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| |||||| ||||||||| ||||||||||||  ||||||||||||||||| |||||||||||   | |||| |||||||||| |||||||||    
T  2785550 gggttcatagtgtgagggtgggaaaataccaaagggtagg-tctagggtttgttcatgagtaaagcttgaaaagctaga-ttcttgtaactcttttgtaa 2785453  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---cc 196  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||   |     
T  2785452 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcct 2785354  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  2785353 tttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 2785302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 33791491 - 33791243
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||| |||||||||| |||||||||    
T  33791491 gggttcatagtgtgagggtgggaaaataccaaagggtagg-tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaa 33791394  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---cc 196  Q
    ||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||   |     
T  33791393 cacattcacatattggattggagagctgctctttcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcct 33791295  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  |||||||||||||||| | |||| ||||| ||||||    
T  33791294 tttatcgtttatcttg--tatgcttgttagctctatatgtggttttgctataca 33791243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 35387839 - 35387624
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||||  || ||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  35387839 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttattcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 35387741  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||    
T  35387740 cactttcatcatagtagattggagagctgctctctcccccagattaggccatattggctgaattgggtcaacaatctttttggtgtgtttgttcttcctt 35387641  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||| ||||    
T  35387640 tcttgcttatctcgttt 35387624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 243
Target Start/End: Original strand, 31396901 - 31397144
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgtt--catgtgtaaagcttgagg-gttagagttcttgtaac-cttttgt 98  Q
    ||||||||| ||||||  ||||||||  |||||||||||| |||||||||| ||  | ||||||||||||||   | |||| |||||||||| |||||||    
T  31396901 gggttcatagtgtgaggatgggaaaatgccaaagggtaga-tctagggttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgt 31396998  T
Q  99 aacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgt---tttgttctt 194  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||   |||||| ||    
T  31396999 aacacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgtttgtt-tt 31397097  T
Q  195 cctttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttg 243  Q
    | ||| | | ||||||||  ||||||||||||||||| ||||| |||||    
T  31397098 cttttatcgtttatcttg--tatgcttgttagctcttagtgtggttttg 31397144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 33768314 - 33768169
Alignment:
Q  44 tctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 141  Q
    |||||||||||||||||||||||||||||   | |||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  33768314 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctcccccccag 33768216  T
Q  142 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttt 187  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  33768215 attaggccacattggctgaactgggtcaacaatcttgctcggtgttt 33768169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 243
Target Start/End: Original strand, 31401758 - 31402001
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgtt--catgtgtaaagcttgagg-gttagagttcttgtaac-cttttgt 98  Q
    ||||||||| ||||||  ||||||||  |||||||||||| ||||| |||| ||  | ||||||||||||||   | |||| |||||||||| |||||||    
T  31401758 gggttcatagtgtgaggatgggaaaatgccaaagggtaga-tctagagttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgt 31401855  T
Q  99 aacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---tt 194  Q
    ||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| |||||||   ||    
T  31401856 aacacattcacatattggattggagagctgctctctcccccatattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgtttt 31401954  T
Q  195 cctttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttg 243  Q
    | ||| | | ||||||||  ||||||||||||||||| ||||| |||||    
T  31401955 cttttatcgtttatcttg--tatgcttgttagctcttagtgtggttttg 31402001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 9353332 - 9353429
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  9353332 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 9353429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 36932350 - 36932447
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  36932350 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 36932447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 15464709 - 15464532
Alignment:
Q  1 tagggttcat-attgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgta 99  Q
    |||||||||| ||||||||||||||||| ||| || ||||||||  ||||  |||||| ||||||| |||||   | ||   ||||||||||  ||||||    
T  15464709 tagggttcattattgtgagagtgggaaa-cacaaatgggtagaaattaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaactctttgta 15464612  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||| | |||||||||||||||||||    
T  15464611 acactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggtcaacaatctt 15464532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 10281849 - 10281751
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||    
T  10281849 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaactgggtcaacaatctt 10281751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 11916971 - 11917068
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||    
T  11916971 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaatct 11917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 14520327 - 14520230
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| ||||||| |||||||||||| |||| |||||||| |||||||| | |||||||||||||||||||    
T  14520327 ttcttgtaactctttgtaacactttcatcatagtggattgaagagctgctctcccccctagattaggtcatattggaccgaactgggtcaacaatctt 14520230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 17003970 - 17004057
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||| || |||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  17003970 cttttgaaatactttcatcatagtggattgaagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 17004057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 3880397 - 3880299
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||| |||||||| | ||||||  |||||||||||    
T  3880397 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattggacagaactgaatcaacaatctt 3880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 12084175 - 12084269
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||| |||| ||| | ||||||||||||||||    
T  12084175 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcatagtggaccgaactgggtcaacaat 12084269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 19588844 - 19588746
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||  |||||||  |||||||| | |||||||||||||||||||    
T  19588844 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattggaccgaactgggtcaacaatctt 19588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 28832356 - 28832259
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||||||||||||||||||||||| |||||||| | |||| ||||||||||||||    
T  28832356 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaatctt 28832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 42127410 - 42127507
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || |||||||| | ||||||||||||||||||||||| |||||| | | |||||||||||||||||||    
T  42127410 ttcttgtaactcattgtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatctt 42127507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 4410241 - 4410301
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 4410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 31300612 - 31300693
Alignment:
Q  98 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| || || |||||||||||| | ||||||||| |||| |||| |||||||| | |||||||||||||||||||    
T  31300612 taacactttcatcttagtggattggagagtttctctctccctcagactaggtcatattggaccgaactgggtcaacaatctt 31300693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 15552464 - 15552524
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  15552464 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 31179431 - 31179371
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31179431 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31179371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 31542953 - 31543013
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31542953 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31543013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 31545299 - 31545359
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31545299 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31545359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 27910675 - 27910729
Alignment:
Q  120 ggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||||||||||||||||||||| ||  |||| | |||||||||||||||    
T  27910675 ggagagctgctctctcccccagattaggtcaatttggaccgaactgggtcaacaa 27910729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 24553507 - 24553603
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || |||| ||||| |||||||||||||  |||||||| |||||||| | ||||||| |||||||||||    
T  24553507 ttcttgtaactcattgtaacactttcatcttagtggagtggag-gctgctctctcccatagattaggtcatattggaccgaactggatcaacaatctt 24553603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 3373197 - 3373137
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| | |||||||||||||||| |||| || ||||| | |||||||||||||||    
T  3373197 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 3373137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 10749919 - 10749979
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  10749919 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 10749979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 15354635 - 15354575
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  15354635 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15354575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 6311474 - 6311210
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| || ||||||| ||||||||||||||||    
T  6311474 tagggttcatcttgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaaggctagagtttcttgtaaccttttgta 6311376  T
Q  100 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311375 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttt 6311276  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |||||||||||||||||||| |||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  6311275 cttgcttatcttgtttatgctttgttatctcttagtgtggttttgctatacactagtctagggctg 6311210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 7289834 - 7290099
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  7289834 tagggttcatattgtgagagtggggaaacaccaaagggtagaatatagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 7289933  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7289934 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttt 7290033  T
Q  200 cttgcttatcttgtttat-gcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
     |  |||||||||||||| | |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  7290034 atcacttatcttgtttatggtttgttatctctttgtgtggttttgctatacactagtctagggctg 7290099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 36979555 - 36979291
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  36979555 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 36979457  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36979456 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 36979357  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||| ||| ||| || ||||||||||| ||||| | ||||||||||||||||||    
T  36979356 tcttgcttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctg 36979291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 25328187 - 25328379
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  25328187 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt-cttgtaaccttttgtaa 25328285  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25328286 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctt 25328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 30655824 - 30655555
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  30655824 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 30655726  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtg----ttttgttctt 194  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    ||||||||||    
T  30655725 acactttcatcatattagattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttttttgttctt 30655626  T
Q  195 cctttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||||||||||| |||||| |||| |||||| ||||| | ||||||||||||||||||    
T  30655625 cctttcttgcttatcttgtttatgctttgttatctctatgtgtggttttgctctacactagtctagggctg 30655555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 33037726 - 33037989
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||||||  | |||||||||||||||||||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  33037726 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 33037824  T
Q  100 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  33037825 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttctttt 33037924  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |||||||||||||||| ||| ||| || ||||||||||| ||||| | ||||||||||||||||||    
T  33037925 cttgcttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctg 33037989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 4759994 - 4760259
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||| |||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  4759994 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 4760092  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  4760093 acactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatcttcttgatgttttgttcttcctt 4760192  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||| | ||||||||||||||||||    
T  4760193 tcttgcttatcttgtttatgctttgttatctctttgtgtggttttgctctacactagtctagggctg 4760259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 18853086 - 18853349
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaacc-ttttgt 98  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||||| ||||||  | ||  ||| ||||||||| ||||||    
T  18853086 tagggttcatattgtgagagtggggaaataccaaagggtaaaatctagggtttgttcttgtgtaa-gcttgaatgctattgtttcttgtaacccttttgt 18853184  T
Q  99 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcct 197  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18853185 aacactttcattatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcct 18853284  T
Q  198 ttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggc 262  Q
    |||||||||||||||||| ||| ||| || ||||||||||| ||||| | || || ||||||||||    
T  18853285 ttcttgcttatcttgttt-tgctttggtatctctttgtgtggttttgctctaaacaagtctagggc 18853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 18870480 - 18870743
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaacc-ttttgt 98  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||  | ||  ||| ||||||||| ||||||    
T  18870480 tagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaatgctattgtttcttgtaacccttttgt 18870578  T
Q  99 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcct 197  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  18870579 aacactttcattatattggattggagagctgctctctcccccagattaggccatattggatgaactgggtcaacaatcttcttggtgttttgttcttcct 18870678  T
Q  198 ttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggc 262  Q
    |||||||||||||||||| ||| ||| || ||||||||||| ||||| | || || ||||||||||    
T  18870679 ttcttgcttatcttgttt-tgctttggtatctctttgtgtggttttgctctaaacaagtctagggc 18870743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 10689061 - 10689315
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaa-gggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgt 98  Q
    |||||||||||||||||||||||| ||||| || | ||||||||||||||| |||||| ||||||| |||||| || ||  ||| ||||||||| | |||    
T  10689061 tagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctctgt 10689159  T
Q  99 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcct 197  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10689160 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcct 10689259  T
Q  198 ttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacacta 253  Q
    ||||| |||||||||||| ||| ||| || ||||||||||| ||||| | |||||||    
T  10689260 ttcttacttatcttgttt-tgctttggtatctctttgtgtggttttgctctacacta 10689315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 3 - 194
Target Start/End: Original strand, 39784734 - 39784924
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||    
T  39784734 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaac 39784831  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt 194  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39784832 actt-cacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctt 39784924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 35745566 - 35745318
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||| |||||||||| |||||||||    
T  35745566 gggttcatagtgtgagggtgggaaaataccaaagggtagg-tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaa 35745469  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---cc 196  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||   |     
T  35745468 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcct 35745370  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  35745369 tttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 35745318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1261874 - 1262089
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||  |||| | ||||||| |||||   | ||   ||||||||||| |||||||    
T  1261874 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgtacttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 1261972  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||||| |||||||||||||    
T  1261973 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggttgaactgggtcaacaatctttttggtgtgtttgttcttcctt 1262072  T
Q  199 tcttgcttatcttgttt 215  Q
    |||  ||||||||||||    
T  1262073 tctatcttatcttgttt 1262089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 31071149 - 31071362
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  31071149 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 31071247  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttctcggtgt-tttgttcttcct 197  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||| | ||||| ||||||||||||    
T  31071248 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactcggtcaacaatctttttggtgtgtttgttcttcct 31071347  T
Q  198 ttcttgcttatcttg 212  Q
    |||||||||||||||    
T  31071348 ttcttgcttatcttg 31071362  T

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Target: chr8; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 10684174 - 10684410
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||  ||||||||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  10684174 gggttcatagtgtgaggttgggaaattaccaaagggtagg-tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 10684271  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcc 196  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||   |||     
T  10684272 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttct 10684371  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||| | | ||||||||  ||||||||||||||||| |||||    
T  10684372 tttatcgtttatcttg--tatgcttgttagctcttagtgtg 10684410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 26287985 - 26287866
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttc 192  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttc 26287886  T
Q  193 ttcctttcttgcttatcttg 212  Q
    ||||||||||||||||||||    
T  26287885 ttcctttcttgcttatcttg 26287866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 26301242 - 26301123
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttc 192  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttc 26301143  T
Q  193 ttcctttcttgcttatcttg 212  Q
    ||||||||||||||||||||    
T  26301142 ttcctttcttgcttatcttg 26301123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 26313236 - 26313117
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttc 192  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttc 26313137  T
Q  193 ttcctttcttgcttatcttg 212  Q
    ||||||||||||||||||||    
T  26313136 ttcctttcttgcttatcttg 26313117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 26403240 - 26403327
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  26403240 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 26403327  T

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Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 4456125 - 4456028
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||    
T  4456125 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggaccgaaccgggtcagcaatctt 4456028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 7412438 - 7412305
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttct 179  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||| |||     
T  7412438 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaattttca 7412339  T
Q  180 cggtgt-tttgttcttcctttc-ttgcttatctt 211  Q
     ||||| ||||||| | ||||| |||||||||||    
T  7412338 tggtgtgtttgttccttctttcattgcttatctt 7412305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 19175754 - 19175851
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  19175754 ttcttgtaactctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 19175851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 23799576 - 23799674
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| ||| |||||| |||||||| | |||||||||||||||||||    
T  23799576 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattggaccgaactgggtcaacaatctt 23799674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 4696609 - 4696693
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatctt 177  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  4696609 ttgtaactctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatctt 4696693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 6127319 - 6127224
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||| |||||||| | |||||| |||||||||    
T  6127319 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattggaccgaactgagtcaacaat 6127224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 5702482 - 5702580
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| |||||  ||||||||| | |||||||||||||| |||||| |||||||| | |||||||||||||||||||    
T  5702482 ttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggtcaacaatctt 5702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 9765852 - 9765914
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatc 175  Q
    |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatc 9765914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 19752394 - 19752491
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| |||||||| | ||||| |||||||||||||    
T  19752394 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattggaccgaactaggtcaacaatctt 19752491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 43079877 - 43079937
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  43079877 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 43082248 - 43082308
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  43082248 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43082308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 6813750 - 6813683
Alignment:
Q  111 tattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||||||||||||||| ||  ||||  ||||||| | ||||||||| |||||||||    
T  6813750 tattggattggagagctgctctctcccctagtgtaggttatattggaccgaactgggttaacaatctt 6813683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 147
Target Start/End: Original strand, 18810982 - 18811015
Alignment:
Q  114 tggattggagagctgctctctcccccagattagg 147  Q
    |||||||||| |||||||||||||||||||||||    
T  18810982 tggattggagggctgctctctcccccagattagg 18811015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 9054836 - 9054912
Alignment:
Q  82 ttcttgtaacct-tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 156  Q
    |||||||||||  |||||| ||||||| || || |||||| |||||||||||||||| ||||| |||| ||||||||    
T  9054836 ttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatattgg 9054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 44721118 - 44721178
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||||||||||||||||| |||| |||| ||  |||| | |||||||||||||||    
T  44721118 tggattggagagctgctctctcccgcagactaggtcaatttggaccgaactgggtcaacaa 44721178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 204; Significance: 1e-111; HSPs: 3)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 9552 - 9812
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  9552 tagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaggctagagt-cttgtaaccttttgtaa 9649  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9650 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 9749  T
Q  201 ttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||  ||||||||    
T  9750 ttgcttatcttgtttatgcttgttagctc-ttgtgtggttttgctatatactagcttagggctg 9812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3757 - 3845
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaac 91  Q
    ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || ||||| |||||||||    
T  3757 tagggttcatagtgtgagagtgggaaaataccaaagggtag-atctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaac 3845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 1 - 59
Alignment:
Q  203 gcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |||||||||||||||||||||||||||   ||||| ||||| ||||||||||  ||||||||    
T  1 gcttatcttgtttatgcttgttagctc---gtgtggttttgctatacactagcttagggctg 59  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 51520634 - 51520369
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  51520634 tagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 51520535  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  51520534 cactttctcatattggattggagagctgctctctcccccagattaggccatattggcagaactgggtcaacaatcttctcggtgttttgttcttcctttt 51520435  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
     |  |||||||||||||||| |||||| |||||||| || ||||| ||||||||||||||||||||    
T  51520434 atcacttatcttgtttatgctttgttatctctttgtatggttttgctatacactagtctagggctg 51520369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 9224315 - 9224579
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  9224315 tagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaa 9224414  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9224415 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttt 9224514  T
Q  201 tt-gcttatcttgtttatgctt-gttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
       ||||||||||||| ||||| | || ||||||||||| ||||| ||||||||||||||||||||    
T  9224515 accgcttatcttgttt-tgctttggtatctctttgtgtggttttgctatacactagtctagggctg 9224579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 3814199 - 3813940
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  | |||||| |||||||||||||||||    
T  3814199 tagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaa 3814102  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccttt 199  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  3814101 cactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgcatggtgttttgttcttccttt 3814002  T
Q  200 cttgcttatcttgtttatgcttgttagctctttgtgt-gcttttgttatacactagtctagg 260  Q
    ||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||    
T  3814001 cttgcttatcttgtttatgcttgttagctctttgtgtggtttttgcgatacactagtctagg 3813940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 9229102 - 9229366
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  9229102 tagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaa 9229201  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  9229202 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggttaacaatcttctcggtgttttgttcttcctttt 9229301  T
Q  201 tt-gcttatcttgtttatgctt-gttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
       ||||||||||||| ||||| | || ||||||||||| ||||| ||||||||||||||||||||    
T  9229302 accgcttatcttgttt-tgctttggtatctctttgtgtggttttgctatacactagtctagggctg 9229366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 24742118 - 24741854
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  24742118 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 24742020  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24742019 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 24741920  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||| ||| ||| || ||||||||||| ||||| | ||||||||||||||||||    
T  24741919 tcttgcttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctg 24741854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 45347725 - 45347918
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  45347725 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagaggtcttgtaaccttttgtaa 45347824  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45347825 cactttctcatattggattggagagctgctctctcccccagattaagccatattggctgaactgggtcaacaatcttctcggtgttttgttctt 45347918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 46 - 264
Target Start/End: Original strand, 56146664 - 56146884
Alignment:
Q  46 tagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 145  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56146664 tagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 56146763  T
Q  146 ggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-tttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttg 243  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |  |||||||||||||||| |||||| ||||||||||| |||||    
T  56146764 ggccatattggctgaactggaccaacaatcttctcggtgttttgttcttccttttatcacttatcttgtttatgctttgttatctctttgtgtggttttg 56146863  T
Q  244 ttatacactagtctagggctg 264  Q
     ||||||||||||||||||||    
T  56146864 ctatacactagtctagggctg 56146884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 45357205 - 45357397
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||    
T  45357205 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaa 45357303  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357304 cactttctcatattggattggagagctgctctctcccccagattatgccatattggctgaactgggtcaacaatcttctcggtgttttgttctt 45357397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 18855900 - 18855638
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||    
T  18855900 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaac 18855803  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctt 198  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  18855802 actt-cacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttt 18855704  T
Q  199 tcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |   | ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  18855703 taccgtttatcttgtttatgcttgttagctctttgtgtggttttgctatacactagcttagggctg 18855638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 29760820 - 29760558
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgtt-catgtgtaaagcttgagggttagagtt-cttgtaaccttttgt 98  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||| | ||||||| |||||  || ||  ||| ||||||||| |||||    
T  29760820 tagggttcatagtgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaggctattgtttcttgtaaccctttgt 29760722  T
Q  99 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcct 197  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29760721 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcct 29760622  T
Q  198 ttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctaggg 261  Q
    |||||||||||||||||| ||| |||||  ||||||||||| ||||| | |||||||||||||||    
T  29760621 ttcttgcttatcttgttt-tgctttgttctctctttgtgtggttttgctctacactagtctaggg 29760558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 5732839 - 5732666
Alignment:
Q  2 agggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaac 101  Q
    |||||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||    
T  5732839 agggtttatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaac 5732742  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5732741 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 5732666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 28468542 - 28468660
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttc 192  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggctgaactgggtcaacaatctt-ttggtgtgtttgttc 28468640  T
Q  193 ttcctttcttgcttatcttg 212  Q
    ||||||||||||||||||||    
T  28468641 ttcctttcttgcttatcttg 28468660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 31985555 - 31985764
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||| ||||||||||||||||| ||| || ||||||||  ||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  31985555 tagggttcacattgtgagagtgggaaa-cacaaatgggtagaaattaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 31985652  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttctcggtgt-tttgttcttcct 197  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||| | ||||| ||||||||||||    
T  31985653 cactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggaccgaactgggtcaacaatctt-ttggtgtgtttgttcttcct 31985750  T
Q  198 ttcttgcttatctt 211  Q
    ||||||||||||||    
T  31985751 ttcttgcttatctt 31985764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 10047477 - 10047379
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  10047477 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 10047379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 39246092 - 39245994
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  39246092 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 39245994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 36315229 - 36315326
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||    
T  36315229 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattctt 36315326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 36329438 - 36329535
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||    
T  36329438 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattctt 36329535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 16623292 - 16623390
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||  | |||||||||||||||||||    
T  16623292 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccgaactgggtcaacaatctt 16623390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 5396671 - 5396768
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||| ||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||||    
T  5396671 ttcttgtaactctttgcaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 5396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 38152449 - 38152536
Alignment:
Q  92 cttttgtaacactttctc-atattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| | ||| |||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||    
T  38152449 cttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatctt 38152536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 3796518 - 3796616
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||| ||||| |||||||||||||| |||||| |||||||| | |||||||||||||||||||    
T  3796518 ttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattggacggaactgggtcaacaatctt 3796616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 5143345 - 5143260
Alignment:
Q  93 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||    
T  5143345 ttttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatct 5143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 5269204 - 5269288
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 5269288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 5147763 - 5147678
Alignment:
Q  93 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    ||||||||||||||| ||||| |||| ||||||||||||| |||||||| |||||| |||||||| | ||||||||||||||||||    
T  5147763 ttttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattggaccgaactgggtcaacaatct 5147678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 3777646 - 3777550
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||| |||||||| | ||||||||  ||||||| | ||||||||||||||||||    
T  3777646 ttcttgtaactctttgtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggtcaacaatct 3777550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 24333896 - 24333809
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||| || |||||||||    
T  24333896 cttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgagttaacaatctt 24333809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 6743425 - 6743507
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaaca 172  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||  |||||||| |||||||| | ||||||||||||||    
T  6743425 cttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattggaccgaactgggtcaaca 6743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 16630679 - 16630773
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||| | |||||||| | ||||| |||||||||    
T  16630679 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattggaccgaactaggtcaacaa 16630773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 16931849 - 16931789
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16931849 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 16934203 - 16934143
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16934203 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16934143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 22780433 - 22780373
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22780433 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28468458 - 28468506
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagg 49  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||    
T  28468458 tagggttcatattgagagagtggggaaacacaaatgggtagaatctagg 28468506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 39774304 - 39774380
Alignment:
Q  82 ttcttgtaacct-tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 156  Q
    |||||||||||| |||||| ||||||| |  || ||||||||||||||||||| ||||||||| |||| ||||||||    
T  39774304 ttcttgtaacctatttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattgg 39774380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 44599898 - 44599838
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  44599898 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 44599838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 54867269 - 54867184
Alignment:
Q  93 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||| ||||| | ||||| || |||||||||||||| ||| |||| |||||||| | |||||||||||||||||||    
T  54867269 ttttgtaacattttcatcatagttgattgaagggctgctctctcccc-agactaggtcatattggaccgaactgggtcaacaatctt 54867184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 6765117 - 6765177
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  6765117 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 6765177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 7941596 - 7941656
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  7941596 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 7941656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 18709224 - 18709164
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||||||||  ||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  18709224 tggattggaggactgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 18709164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 22782798 - 22782738
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | ||||||| |||||||    
T  22782798 tggattggagggctgctctctcccccagactaggtcagattggaccgaactggatcaacaa 22782738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 22010605 - 22010867
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22010605 tagggttcatattgtgagagtggggaaatatcaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 22010704  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22010705 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttt 22010804  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggc 262  Q
     | ||||||||||||| ||| ||| || ||||||||||| ||||| |||||||| |||||||||    
T  22010805 atcgcttatcttgttt-tgctttggtatctctttgtgtggttttgctatacacttgtctagggc 22010867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 11857151 - 11856884
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  11857151 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 11857052  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtg---ttttgttcttcc- 196  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||     
T  11857051 cactttctcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatcttcttggtgtttttttgttcttcct 11856952  T
Q  197 tttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||| | |||| |||||||| ||| ||| || ||||||||||| ||||| ||||||||||||||||||||    
T  11856951 tttatcgcttgtcttgttt-tgctttggtatctctttgtgtggttttgctatacactagtctagggctg 11856884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 28184681 - 28184417
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||  ||||||||||||||||    
T  28184681 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtg-ttgtaaccttttgtaa 28184583  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  28184582 cactttctcatattagattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctttctttt 28184483  T
Q  201 t--tgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |   ||||||||||||||||| |||  | ||| ||||||| ||||| ||||||||||||||||||||    
T  28184482 taccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagtctagggctg 28184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 14742345 - 14742608
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||||    
T  14742345 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagagt-cttgtaaccttttgtaa 14742443  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  14742444 cactttctcatattggattggagagctgctctctcccccaaattaggtcatattggctgaactgggtcaacaatcttctcggtgttttgttctttctttt 14742543  T
Q  201 tt-gcttatcttgtttatgctt-gttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
       ||||||||||||| ||||| | || ||||||||||| ||||| ||||||||||||||||||||    
T  14742544 accgcttatcttgttt-tgctttgatatctctttgtgtggttttgctatacactagtctagggctg 14742608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 14737485 - 14737749
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||||    
T  14737485 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagagt-cttgtaaccttttgtaa 14737583  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttc-ttccttt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||    
T  14737584 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactggatcaacaatcttctcggtgttttgttctttctttt 14737683  T
Q  200 cttgcttatcttgtttatgc-ttgttagctc-tttgtgtgcttttgttatacactagtctagggctg 264  Q
       ||||||||||||| ||| ||| || ||| |||||||| ||||| ||||||||||||||||||||    
T  14737684 accgcttatcttgttt-tgctttggtatctcttttgtgtggttttgctatacactagtctagggctg 14737749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 28155479 - 28155735
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  | || | |||||||||||||||||||    
T  28155479 tagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctaaa-ttcttgtaaccttttgtaa 28155576  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cct 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||  | |    
T  28155577 cactttctcatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgttcggtgttttgttctttccat 28155676  T
Q  198 ttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtc 256  Q
    ||   | ||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||    
T  28155677 ttaccgtttatcttgtttatgcttgttagctcttagtgtggttttgctatacacaagtc 28155735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 6438674 - 6438412
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||    
T  6438674 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaac 6438577  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctt 198  Q
    |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||  | ||    
T  6438576 actt-cacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttgctcggtgttttgttctttccttt 6438478  T
Q  199 tcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |   | ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  6438477 taccgtttatcttgtttatgcttgttagctctttgtgtggttttgctatacactagcttagggctg 6438412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 5674688 - 5674905
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgtt-catgtgtaaagcttgagggttagagtt-cttgtaaccttttgt 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| | ||||||| |||||   | ||  ||| ||||||||| |||||    
T  5674688 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaagctattgtttcttgtaaccctttgt 5674786  T
Q  99 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcc 196  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||| |    
T  5674787 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctctttggtgtgtttgttctttc 5674886  T
Q  197 tttcttgcttatcttgttt 215  Q
    |||||||||||| ||||||    
T  5674887 tttcttgcttatattgttt 5674905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 6005592 - 6005344
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||| |||||||||| |||||||||    
T  6005592 gggttcatagtgtgagggtgggaaaataccaaagggtagg-tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaa 6005495  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---cc 196  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||   |     
T  6005494 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcct 6005396  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  6005395 tttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 6005344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 16838921 - 16838671
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgt 98  Q
    ||||||||||| ||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||||||   | |||| |||||||||| |||||||    
T  16838921 tagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgt 16838824  T
Q  99 aacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---tt 194  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||   ||    
T  16838823 aacacattcacatattggattggagagctgctctctcccccagattaagccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgtttt 16838725  T
Q  195 cctttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    | ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  16838724 cttttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 16838671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 33330353 - 33330596
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgt 98  Q
    ||||||||||| ||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||   | |||| |||||||||| |||||||    
T  33330353 tagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgt 33330450  T
Q  99 aacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc--ttc 195  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||  |||    
T  33330451 aacacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttc 33330549  T
Q  196 ctttc-ttgcttatcttgtttatgcttgttagctctttgtgtgctttt 242  Q
     |||| | | |||||||| |||||||||||||||||| ||||| ||||    
T  33330550 ttttcatggtttatcttg-ttatgcttgttagctcttagtgtggtttt 33330596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 33335850 - 33336093
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgt 98  Q
    ||||||||||| ||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||   | |||| |||||||||| |||||||    
T  33335850 tagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgt 33335947  T
Q  99 aacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc--ttc 195  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || |||| |||||||  |||    
T  33335948 aacacattcacatattggattggagagctgctctctcccccagattaggtcacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttc 33336046  T
Q  196 ctttc-ttgcttatcttgtttatgcttgttagctctttgtgtgctttt 242  Q
     |||| | | |||||||| |||||||||||||||||| ||||| ||||    
T  33336047 ttttcatggtttatcttg-ttatgcttgttagctcttagtgtggtttt 33336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 5757478 - 5757575
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  5757478 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 5757575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 22709102 - 22708984
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatcttctcggtgt-tttgtt 191  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||  | ||||| |||||||||| || | ||||| ||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgaaccgaactaggtcaacaat-tttttggtgtgtttgtt 22709004  T
Q  192 cttcctttcttgcttatctt 211  Q
    ||||||||||||||||||||    
T  22709003 cttcctttcttgcttatctt 22708984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 21356133 - 21356036
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  || ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||||    
T  21356133 ttcttgtaactcttagtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 21356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 5572240 - 5572338
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| |||||||| | ||| |||||||||||||||    
T  5572240 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggtcaacaatctt 5572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 10077176 - 10077262
Alignment:
Q  93 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | ||| |||||||||||||||    
T  10077176 ttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaattgggtcaacaatctt 10077262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 31086472 - 31086570
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| | |||||||||||||| ||||| |||||||||||| |||||||||||| |||||||  |||||||| |||||||||||||||||||||    
T  31086472 ttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactgggtcaacaatctt 31086570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 4630040 - 4629954
Alignment:
Q  93 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||| |||||||| |||||||| |||||||| ||||||||||||    
T  4630040 ttttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggactgaactgagtcaacaatctt 4629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 31979611 - 31979513
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||| ||||||||| || || |||||||||| ||||||||||||||||||||| | |||||||| | |||||||||||||||||||    
T  31979611 ttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatctt 31979513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 5343527 - 5343416
Alignment:
Q  132 tctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcctttcttgcttatcttgtttatgcttgttagc 227  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |||||||   ||||||| | | ||||||||  |||||||||||||    
T  5343527 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcctttatcgtttatcttg--tatgcttgttagc 5343431  T
Q  228 tctttgtgtgctttt 242  Q
    |||| ||||| ||||    
T  5343430 tcttagtgtggtttt 5343416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 21801343 - 21801429
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgg 165  Q
    |||||||||| |||||||||||||||  || || |||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  21801343 ttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactgaactgg 21801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 22963797 - 22963700
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||||||||| || |||||||  | |||||||||||||||||||    
T  22963797 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatctt 22963700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 23824596 - 23824693
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||||||||| || |||||||  | |||||||||||||||||||    
T  23824596 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatctt 23824693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 18232943 - 18232867
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 156  Q
    |||||||||| |||||||||||||||| ||||| || ||||||| | ||||||||||||||||||||| ||||||||    
T  18232943 ttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattgg 18232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 5017482 - 5017566
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccata-ttggctgaactgggtcaacaatctt 177  Q
    ||||||||||||| ||||| | |||||||| | |||||||||||| |||||||| |||| ||| | |||||||||||||||||||    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaatctt 5017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 31936651 - 31936587
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||||||||| |||||| |||| |||||||| | ||||| |||||||||||||    
T  31936651 tggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatctt 31936587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22709185 - 22709116
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttg 71  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| ||||| |||||||    
T  22709185 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgt-aagcttg 22709116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 12195575 - 12195515
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  12195575 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 12195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 5273276 - 5273203
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttctcggtgtt 186  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||  ||||| |||||    
T  5273276 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaaatttctcagtgtt 5273203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 4816291 - 4816231
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  4816291 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 4816231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 19704627 - 19704567
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  19704627 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 19704567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 20915416 - 20915356
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  20915416 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 20915356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 26932622 - 26932562
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| | |||||||||||||||| |||| || ||||| | |||||||||||||||    
T  26932622 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 26932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 29754769 - 29754709
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  29754769 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 29754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 33309110 - 33309170
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  33309110 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 33309170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 12406508 - 12406244
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  12406508 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 12406409  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  12406408 cactttctcatattggattggagagctattctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctttctttt 12406309  T
Q  201 tt-gcttatcttgtttatgctt-gttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
       ||||||||||||| ||||| | || ||||||||||| ||||| ||||||||||||||||||||    
T  12406308 accgcttatcttgttt-tgctttggtatctctttgtgtggttttgctatacactagtctagggctg 12406244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 24024235 - 24024492
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||||||    
T  24024235 tagggttcatcgtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt-cttgtaacattttgtaa 24024333  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtg-ttttgttcttcc-t 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||| |    
T  24024334 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgttcggtgtttttgttcttcctt 24024433  T
Q  198 ttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtc 256  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||    
T  24024434 ttcttgcttatcttgtttatgcttgttagctctttgtgtggttttgctatatactagtc 24024492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 12397088 - 12396824
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||||||||    
T  12397088 tagggttcatattgtgatagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagattaaaggctagagttcttgtaaccttttgtaa 12396989  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctt-ccttt 199  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12396988 cactttctcatattggattggagagctgttctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcccttt 12396889  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
       ||||||||||||| ||| ||| || ||||||||||| ||||| ||||||||||||||||||||    
T  12396888 accgcttatcttgttt-tgctttggtatctctttgtgtggttttgctatacactagtctagggctg 12396824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31109492 - 31109713
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||| || |||||| |||||||||||||||||    
T  31109492 tagggttcatagtgtgagagtgggaaaatatcaaagggtagaatctagggtttgttcatgtgcaaagcttgaaggctagagt-cttgtaaccttttgtaa 31109590  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttcc-tt 198  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  31109591 cactttctcatattggattggagagctgctctctcccctagattaggccatattggctgaactgggtcaacaatcttgttcggtgttttgttcttccttt 31109690  T
Q  199 tcttgcttatcttgtttatgctt 221  Q
    ||||| |||||||||||||||||    
T  31109691 tcttgtttatcttgtttatgctt 31109713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 19992487 - 19992224
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||    
T  19992487 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaac 19992390  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctt 198  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  19992389 actttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttt 19992290  T
Q  199 tcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |   | ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  19992289 taccgtttatcttgtttatgcttgttagctctttgtgtggttttgctatacactagcttagggctg 19992224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 20357466 - 20357730
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||||||  | |||||||||||||||  ||||| |||||||||||||| || ||  ||| ||||||||| ||||||    
T  20357466 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcatgttcttgtgtaaagcttgaaggctattgtttcttgtaaccctttgta 20357565  T
Q  100 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-tt 198  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||    
T  20357566 acactttctcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatcttcttggtattttgttcttccttt 20357665  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||  ||| |||||| ||||||||||| ||||| | ||||||||||||||||||    
T  20357666 tcttgcttatcttgtt--tgctttgttatctctttgtgtggttttgctctacactagtctagggctg 20357730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 264
Target Start/End: Original strand, 21812149 - 21812412
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagctt-gagg-gttagagttcttgtaaccttttgtaa 100  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||   | |||||| |||| ||||||||||||    
T  21812149 gggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagctttgacaagctagagt-cttggaaccttttgtaa 21812246  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc--ttcct 197  Q
     |||| | |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  ||| |    
T  21812247 gactt-cacatattggattggaaagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttctt 21812345  T
Q  198 ttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||   | ||||||||||||||||||||| ||||||||||| ||||| ||||||||||  ||||||||    
T  21812346 ttaccgtttatcttgtttatgcttgttaactctttgtgtggttttgctatacactagcttagggctg 21812412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 2058144 - 2057927
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaa-gggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgt 98  Q
    |||||||||||||||||||||||| ||||| || | ||||||||||||||| |||||| ||||||| ||||||  | ||  ||| ||||||||| |||||    
T  2058144 tagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaatgctattgtttcttgtaaccctttgt 2058046  T
Q  99 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc- 196  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  2058045 aacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcct 2057946  T
Q  197 tttcttgcttatcttgttt 215  Q
    ||| |||||||||||||||    
T  2057945 tttattgcttatcttgttt 2057927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21639985 - 21639770
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  21639985 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 21639887  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  21639886 cactttcattatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttcctt 21639787  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  21639786 tcttgcttatcttgttt 21639770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1533362 - 1533579
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgtt-catgtgtaaagcttgagggttagagtt-cttgtaaccttttgt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | ||||||| |||||   | ||  ||| ||||||||| |||||    
T  1533362 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaagctattgtttcttgtaaccctttgt 1533460  T
Q  99 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcc 196  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |    
T  1533461 aacactttcatcatattggattggagagatgctctctcccccagattaggccatattggctgaactgggtcaacaatcttattggtgtgtttgttctttc 1533560  T
Q  197 tttcttgcttatcttgttt 215  Q
    |||||||||||| ||||||    
T  1533561 tttcttgcttatattgttt 1533579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18408940 - 18408726
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| ||||||| |||||   ||||   ||||||||||| |||||||    
T  18408940 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagttatttttcttgtaaccctttgtaa 18408842  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||    
T  18408841 cactttcatcatactggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ttggtgtgtttgttctttctt 18408743  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  18408742 tcttgcttatcttgttt 18408726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21646183 - 21645968
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||   | ||   ||||||||||| ||| |||    
T  21646183 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttttaa 21646085  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  21646084 cactttcatcatagtggattggagagctgctctcttccctagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttcctt 21645985  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  21645984 tcttgcttatcttgttt 21645968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 4866820 - 4866709
Alignment:
Q  88 taaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttt 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4866820 taaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttt 4866721  T
Q  188 tgttcttccttt 199  Q
    ||||||||||||    
T  4866720 tgttcttccttt 4866709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 18413816 - 18413606
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||| |||||  |||||| ||||||| |||||     ||   ||||||||||| |||||||    
T  18413816 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaatctatttttcttgtaaccctttgtaa 18413718  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||    
T  18413717 cactttcatcatagtggattggagagctgctctctcccc-agattaggccatattggctgaactgggtcaacaatctt-ttggtgtgtttgttctttctt 18413620  T
Q  199 tcttgcttatcttg 212  Q
    ||||||||||||||    
T  18413619 tcttgcttatcttg 18413606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 24266112 - 24266348
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||  ||||||||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  24266112 gggttcatagtgtgaggttgggaaattaccaaagggtagg-tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 24266209  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcc 196  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||   ||||    
T  24266210 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcc 24266309  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||| | | ||||||||  ||||||||||||||||| |||||    
T  24266310 tttatcgtttatcttg--tatgcttgttagctcttagtgtg 24266348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 24261233 - 24261469
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||  ||||||||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  24261233 gggttcatagtgtgaggttgggaaattaccaaagggtagg-tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 24261330  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcc 196  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||   |||     
T  24261331 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttct 24261430  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||| | | ||||||||  ||||||||||||||||| |||||    
T  24261431 tttatcgtttatcttg--tatgcttgttagctcttagtgtg 24261469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 16880169 - 16880012
Alignment:
Q  82 ttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctc 180  Q
    ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  16880169 ttcttgtaactctttgtaaaacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctt 16880070  T
Q  181 ggtgttttgttc---ttcctttcttgcttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||||||||||||   ||| ||| | | ||||||||  ||||||||||||||||| |||||    
T  16880069 ggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagctcttagtgtg 16880012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 16885025 - 16884868
Alignment:
Q  82 ttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctc 180  Q
    ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  16885025 ttcttgtaactctttgtaaaacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctt 16884926  T
Q  181 ggtgttttgttc---ttcctttcttgcttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||||||||||||   ||| ||| | | ||||||||  ||||||||||||||||| |||||    
T  16884925 ggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagctcttagtgtg 16884868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 29159901 - 29159803
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||    
T  29159901 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatctt 29159803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 21983370 - 21983285
Alignment:
Q  93 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  21983370 ttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 21983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 46516309 - 46516407
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| |||||||| | |||||||||||||||||||    
T  46516309 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatctt 46516407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 49091759 - 49091661
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||| |||||||| || ||||||||||||||||||    
T  49091759 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattggactaaactgggtcaacaatctt 49091661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 44848684 - 44848781
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||  | |||||||||||||||||||    
T  44848684 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattgaaccgaactgggtcaacaatctt 44848781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 2647695 - 2647793
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatatt-ggctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||| |||| |||||| ||| ||| |||||||||||||||    
T  2647695 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgggccgaattgggtcaacaatctt 2647793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 33332449 - 33332547
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| || || |||||||||| ||||||||||||||||||||||| |||||| | | |||||||||||||||||||    
T  33332449 ttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatctt 33332547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 9190008 - 9190105
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||    
T  9190008 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaactgggtcaacaatctt 9190105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 20284186 - 20284089
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  20284186 ttcttgtaacgcattgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 20284089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 56045 - 55948
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||| |||||||| | |||||||||||| ||||||    
T  56045 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagattaggtcatattggaccgaactgggtcaataatctt 55948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 2580487 - 2580390
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||||||| |||| |||||||| | ||| |||||||||||||||    
T  2580487 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaattgggtcaacaatctt 2580390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 35960901 - 35960816
Alignment:
Q  94 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    |||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||| |||||||  | ||||| |||||||||||||    
T  35960901 tttgtaacactttcatcatagtggtttggagggctgctctctcccccagattaggtcatattgaaccgaactcggtcaacaatctt 35960816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 9185178 - 9185262
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||||| || || |||||||||||||| |||||||||||||| ||||  ||||||| | |||||||||||||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatctt 9185262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 28617258 - 28617356
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttctcggtgt-tttg--ttcttcctttcttgcttatc 209  Q
    ||||||||||||||||||||||||||||| |||| |||||||| | ||||||||| |||||| ||   ||||| ||||  ||||||||||||||||||||    
T  28617258 tggattggagagctgctctctcccccagagtaggtcatattggaccgaactgggtaaacaatatt---ggtgtgtttgttttcttcctttcttgcttatc 28617354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 4796666 - 4796764
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| ||||||||||| |||| ||||| |||||| ||| |||||| |||||||||||||||| ||| |||| | ||||||||| |||||||||    
T  4796666 ttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttggaccgaactgggttaacaatctt 4796764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 47263757 - 47263678
Alignment:
Q  98 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| ||||| ||||||||||||||||  ||||||||| |||||| |||||||| | |||||||||||||||||||    
T  47263757 taacactttcatcatagtggattggagagctgc--tctcccccatattaggtcatattggaccgaactgggtcaacaatctt 47263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 2479421 - 2479337
Alignment:
Q  94 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||| ||||| |||||| ||||||||||||| |||| |||||||| |||||||  | |||||||||||||||||||    
T  2479421 tttgtaacactttcatcatagtggatttgagagctgctctc-cccctagattaggtcatattgaaccgaactgggtcaacaatctt 2479337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 21988992 - 21988909
Alignment:
Q  93 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    ||||||||||||||| ||| | |||||||||||| |||||||  | |||||||||| |||||||| | ||||||||||||||||||    
T  21988992 ttttgtaacactttcatcaaagtggattggagagttgctctc--ctccagattaggtcatattggaccgaactgggtcaacaatct 21988909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 31155971 - 31155911
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31155971 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31155911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 1049356 - 1049296
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  1049356 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 1049296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 2935497 - 2935557
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  2935497 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 2935557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 3035953 - 3036013
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  3035953 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 3036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 5817303 - 5817366
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||||||||||||| ||||||| |||| |||||||| | |||||| || |||||||||    
T  5817303 tggattggagagctgctctct-ccccagagtaggtcatattggaccgaactgagttaacaatctt 5817366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 7351712 - 7351652
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  7351712 tggattggagggctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 7351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 8153466 - 8153514
Alignment:
Q  130 tctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  8153466 tctctcccccagattaggtcaagttggactgaactgggtcaacaatctt 8153514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 9027254 - 9027194
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9027254 tggataggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9027194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 22108295 - 22108355
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22108295 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22108355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 22137306 - 22137366
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22137306 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22137366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 40550055 - 40550115
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  40550055 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 40550115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 40552333 - 40552393
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  40552333 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 40552393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 22173103 - 22173367
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22173103 tagggttcatattaggagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaa 22173202  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-ttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22173203 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttt 22173302  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
       ||||||||| ||| ||| ||| || ||||||||||| ||||| ||||||||||||||||||||    
T  22173303 accgcttatcttattt-tgctttggtatctctttgtgtggttttgctatacactagtctagggctg 22173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 7167422 - 7167157
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  7167422 tagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 7167324  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7167323 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 7167224  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||| | ||||||||||||||||||    
T  7167223 tcttgcttatcttgtttatgctttgttatctctttgtgtggttttgctctacactagtctagggctg 7167157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 28503783 - 28504039
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||| ||||||||||||||||    
T  28503783 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaaccttttgta 28503882  T
Q  100 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttt 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28503883 acactttctcatattggattggagagctgctctcttccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt- 28503981  T
Q  200 cttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
            |||||||||||| |||||| ||||||||||| ||||| |||||||||||| |||||||    
T  28503982 --------tcttgtttatgctttgttatctctttgtgtggttttgctatacactagtcaagggctg 28504039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 8738982 - 8739245
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  8738982 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 8739080  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8739081 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 8739180  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgt-gcttttgttatacactagtctagggc 262  Q
    ||||||||||||||||| ||| ||| || |||||||||| | ||||||| || || ||||||||||    
T  8739181 tcttgcttatcttgttt-tgctttggtatctctttgtgtggtttttgttctaaacaagtctagggc 8739245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 9091220 - 9091483
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  9091220 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 9091318  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9091319 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 9091418  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgt-gcttttgttatacactagtctagggc 262  Q
    ||||||||||||||||| ||| ||| || |||||||||| | ||||||| || || ||||||||||    
T  9091419 tcttgcttatcttgttt-tgctttggtatctctttgtgtggtttttgttctaaacaagtctagggc 9091483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 2671505 - 2671769
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||| ||| || ||||||| |||||     ||  ||| ||||||||| ||||||    
T  2671505 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttggtcttgtgtaa-gcttgcaatctattgtttcttgtaaccctttgta 2671603  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2671604 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 2671703  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||| ||| |||||| ||||||||||| ||||  | |||||||| |||||||||    
T  2671704 tcttgcttatcttgttt-tgctttgttatctctttgtgtggtttttctctacactagactagggctg 2671769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 18656609 - 18656436
Alignment:
Q  2 agggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaac 101  Q
    |||||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||    
T  18656609 agggtttatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatgctagagt-cttgtaaccttttgtaac 18656512  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18656511 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 18656436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 40372715 - 40372929
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||||| |||||||||| ||||||  | ||||||||||||||| |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  40372715 tagggttcatattatgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 40372813  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttt 199  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  40372814 cactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctat 40372913  T
Q  200 cttgcttatcttgttt 215  Q
    ||||||||||||||||    
T  40372914 cttgcttatcttgttt 40372929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 8477542 - 8477324
Alignment:
Q  1 tagggttcatattgtgagagtggga-aaacaccaaagggtagaatctagggtttgttcat-gtgtaaagcttgagggttagagtt-cttgtaaccttttg 97  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||  ||||| || |||||| |||||   | ||  ||| ||||||||| ||||    
T  8477542 tagggttcatattgtgagagtgggggaaacaccaaagggtagaatctaggtcttgtttattgtgtaa-gcttgcaagctattgtttcttgtaaccctttg 8477444  T
Q  98 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttc 195  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||     
T  8477443 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgtgtttgttcttt 8477344  T
Q  196 ctttcttgcttatcttgttt 215  Q
    ||||||||||||||||||||    
T  8477343 ctttcttgcttatcttgttt 8477324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 28501616 - 28501750
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagag-ttcttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||| || ||||| ||||||||||||||||||    
T  28501616 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaaccttttgta 28501715  T
Q  100 acactttctcatattggattggagagctgctctct 134  Q
    |||||||||||||||||||||||||||||||||||    
T  28501716 acactttctcatattggattggagagctgctctct 28501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 2676995 - 2677246
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgt 98  Q
    ||||||||||| ||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||   | |||| |||||||||| |||||||    
T  2676995 tagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgt 2677092  T
Q  99 aacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc--ttc 195  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||  |||    
T  2677093 aacacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttc 2677191  T
Q  196 ctttc-ttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
     |||| | | |||||||| |||||||||||||||||| ||||| ||||| ||||||    
T  2677192 ttttcatggtttatcttg-ttatgcttgttagctcttagtgtggttttgctataca 2677246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 250
Target Start/End: Original strand, 2672842 - 2673090
Alignment:
Q  4 ggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaac 101  Q
    |||||||| ||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||   | |||| |||||||||| ||||||||||    
T  2672842 ggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaac 2672939  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc--ttcctt 198  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||  ||| ||    
T  2672940 acattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttcttt 2673038  T
Q  199 tc-ttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    || | | |||||||| |||||||||||||||||| ||||| ||||| ||||||    
T  2673039 tcatggtttatcttg-ttatgcttgttagctcttagtgtggttttgctataca 2673090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 26928510 - 26928721
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||   | ||   || ||||||||| ||||||    
T  26928510 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctattttttcttgtaaccctttgta 26928608  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcct 197  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||| ||    
T  26928609 acactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggctgaactgggtcaacaatctt-ttggtgtgtttgttctttct 26928707  T
Q  198 ttcttgcttatctt 211  Q
    |||| |||||||||    
T  26928708 ttctagcttatctt 26928721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 32143498 - 32143287
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  32143498 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 32143400  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttctcggtgt-tttgttcttcct 197  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||| | ||||| ||||||||||||    
T  32143399 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt-ttggtgtgtttgttcttcct 32143301  T
Q  198 ttcttgcttatctt 211  Q
    ||||||||||||||    
T  32143300 ttcttgcttatctt 32143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 8512392 - 8512202
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||  ||||||||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  8512392 gggttcatagtgtgaggttgggaaattaccaaagggtagg-tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 8512295  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc 192  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  8512294 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc 8512202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 8517272 - 8517082
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||  ||||||||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  8517272 gggttcatagtgtgaggttgggaaattaccaaagggtagg-tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 8517175  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc 192  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  8517174 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc 8517082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 24968284 - 24968034
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgt 98  Q
    ||||||||||| ||||||  |||||||  ||||||||||||| ||| |||||||||||||||||||||||||   | |||| |||||||||| |||||||    
T  24968284 tagggttcatagtgtgaggatgggaaagtaccaaagggtaga-tctcgggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgt 24968187  T
Q  99 aacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---tt 194  Q
    ||||| ||| ||||||||||||||||||| |||||||||| | |||| |||| |||||||||||||||||||||||||| ||||||| |||||||   ||    
T  24968186 aacacattcacatattggattggagagctactctctccccaaaattaagccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgtttt 24968088  T
Q  195 cctttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    | ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  24968087 cttttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 24968034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 1306125 - 1305914
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||| ||||||||| |||||| || |||||||| ||| |  |||||| ||||||| |||||     ||   ||||||||||| |||||||    
T  1306125 tagggttcatattgagagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttgtaa 1306027  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| || || ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  1306026 cactttcatcgtagtggattggagagctgctatctcccctagattaggccatattggctgaactgggtcaacaatctt-ttggtgtgtttgttcttcctt 1305928  T
Q  199 tcttgcttatcttg 212  Q
    ||||||||||||||    
T  1305927 tcttgcttatcttg 1305914  T

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Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 32475580 - 32475424
Alignment:
Q  82 ttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctc 180  Q
    ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  32475580 ttcttgtaactctttgtaa-acattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctt 32475482  T
Q  181 ggtgttttgttc---ttcctttcttgcttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||||||||||||   ||| ||| | | ||||||||  ||||||||||||||||| |||||    
T  32475481 ggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagctcttagtgtg 32475424  T

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Target: chr3; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 27453135 - 27452924
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||| ||||||||| |||||| || ||||||||  ||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  27453135 tagggttcatattgagagagtggggaaacacaaatgggtagaaaataggaattgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 27453037  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttctcggtgt-tttgttcttcct 197  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| | ||||||| ||||||||||| | ||||| ||||||| | ||    
T  27453036 cactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaatctt-ttggtgtgtttgttccttct 27452938  T
Q  198 ttcttgcttatctt 211  Q
    ||||||||||||||    
T  27452937 ttcttgcttatctt 27452924  T

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Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 32480438 - 32480282
Alignment:
Q  82 ttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctc 180  Q
    ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |     
T  32480438 ttcttgtaactctttgtaa-acattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttggtt 32480340  T
Q  181 ggtgttttgttc---ttcctttcttgcttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||||||||||||   ||| ||| | | ||||||||  ||||||||||||||||| |||||    
T  32480339 ggtgttttgttcgttttcttttatcgtttatcttg--tatgcttgttagctcttagtgtg 32480282  T

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Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 27986449 - 27986567
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttctcggtgt-tttgtt 191  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| | ||||| ||||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt-ttggtgtgtttgtt 27986547  T
Q  192 cttcctttcttgcttatctt 211  Q
    | | ||||||||||||||||    
T  27986548 cattctttcttgcttatctt 27986567  T

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Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 8370476 - 8370573
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  8370476 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8370573  T

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Target: chr3; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 27974942 - 27975039
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  27974942 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27975039  T

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Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 18552872 - 18552970
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  18552872 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 18552970  T

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Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 16264447 - 16264350
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  16264447 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 16264350  T

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Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 21711320 - 21711223
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  21711320 ttcttgtaactctttgtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 21711223  T

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Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 36029191 - 36029094
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||    
T  36029191 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggtcaacaatct 36029094  T

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Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 1736294 - 1736389
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  1736294 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 1736389  T

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Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 30709779 - 30709877
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| ||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  30709779 ttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 30709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 33386669 - 33386753
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||| |||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatctt 33386753  T

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Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 3715991 - 3716089
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| | |||||||||||||||||||| || |||||||| |||||||| | |||||||||||||||||||    
T  3715991 ttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggtcaacaatctt 3716089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 6794624 - 6794800
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||||||||||||||||  | ||| || ||||||||  ||||  |||||| ||||||| |||||   | ||   ||||||||||  |||||||    
T  6794624 tagggttcatattgtgagagtgggtga-cacaaatgggtagaaattaggacttgttcttgtgtaa-gcttgcaagctaattttcttgtaactctttgtaa 6794721  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||| |  ||| ||||||||||||||    
T  6794722 cactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggacctaaccgggtcaacaatctt 6794800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 10207983 - 10207860
Alignment:
Q  129 ctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc--ttcctttc-ttgcttatcttgtttatgcttgtt 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||  ||| |||| | | |||||||| |||||||||||    
T  10207983 ctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtg-tttgttcttttcttttcatggtttatcttg-ttatgcttgtt 10207886  T
Q  225 agctctttgtgtgcttttgttataca 250  Q
    ||||||| ||||| ||||| ||||||    
T  10207885 agctcttagtgtggttttgctataca 10207860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 40592771 - 40592869
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| | |||||||||||| ||||||||| ||||||||| |||||||| | |||||||||||||||||||    
T  40592771 ttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggtcaacaatctt 40592869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 48438312 - 48438214
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||| |||||| ||||||    
T  48438312 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaataatctt 48438214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 25795879 - 25795781
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||| ||||||||||| || || | |||||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  25795879 ttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 25795781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 26299086 - 26298988
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| | |||||||  | |||||||||||||||||||    
T  26299086 ttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaaccgaactgggtcaacaatctt 26298988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 1417493 - 1417577
Alignment:
Q  95 ttgtaacactttct-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||| | || |||||||||| | ||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  1417493 ttgtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 1417577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 47923895 - 47923993
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatctt 177  Q
    |||||||||| |||||||| ||||||| ||||| | ||||| || |||||||||||||| |||||||| |||||||| | |||||||||||||||||||    
T  47923895 ttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcccctagattaggtcatattggatcgaactgggtcaacaatctt 47923993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 37466388 - 37466291
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||| ||||||||||||||||||| |||||||| | |||||| ||||||||||||    
T  37466388 ttcttgtaactcattgtaacactttcatcttagtggattggagggctactctctcccccagattaggtcatattggaccgaactgtgtcaacaatctt 37466291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 1309878 - 1309819
Alignment:
Q  153 ttggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctttcttgcttatcttg 212  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  1309878 ttggctgaactgggtcaacaatctttt-ggtgtgtttgttcttcctttcttgcttatcttg 1309819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 39039995 - 39040079
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||||| ||||| |||||||||||| || ||||| |||||||||||| |||||||| | ||||| |||||||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatctt 39040079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 40844749 - 40844652
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||| ||| |||||||||| |||||||||||| |||||||| | ||||||  |||||||||||    
T  40844749 ttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctct-ccccagattaggtcatattggaccgaactgaatcaacaatctt 40844652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 3328346 - 3328443
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || ||||||| || |||||||||||| | |||||||| ||||||||  ||||||||||||||||||||    
T  3328346 ttcttgtaactcattgtaacactttcatcttagtggattgaagggctgctctctcctctagattaggtcatattggaatgaactgggtcaacaatctt 3328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 4386947 - 4387014
Alignment:
Q  111 tattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||  || |||||||| |||||||||    
T  4386947 tattggattggagagctgctctctcccccagagtaggtcatactgaactaaactgggtaaacaatctt 4387014  T

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Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 24695153 - 24695251
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| |||||  ||||| ||| | |||||||||||  |||||||| |||||||| | ||||| |||||||||||||    
T  24695153 ttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattggaccgaactaggtcaacaatctt 24695251  T

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Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 38210569 - 38210629
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||||||||||||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  38210569 tggattggagagctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 38210629  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 50494198 - 50494258
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  50494198 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 50494258  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 53894119 - 53894055
Alignment:
Q  110 atattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  53894119 atattggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 53894055  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 3323680 - 3323755
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 156  Q
    ||||||||||   ||||||||||||| || || |||||||||| |||| |||||| ||||||||||| ||||||||    
T  3323680 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgttctctctcccagattaggtcatattgg 3323755  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 458483 - 458543
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  458483 tggattggagggctgctctctcccccagactaggtcaggttggaccgaactgggtcaacaa 458543  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 6063504 - 6063444
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||| ||||    
T  6063504 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtccacaa 6063444  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 10621588 - 10621528
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||  || ||||| | |||||||||||||||    
T  10621588 tggattggagggctgctctctcccccagactagctcagattggaccgaactgggtcaacaa 10621528  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 39153405 - 39153357
Alignment:
Q  130 tctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  39153405 tctctcccccagattaggtcaagttggactgaactgggtcaacaatctt 39153357  T

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Target: scaffold0135 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 34970 - 35234
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  34970 tagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaa 35069  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  35070 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggttaacaatcttctcggtgttttgttcttcctttt 35169  T
Q  201 tt-gcttatcttgtttatgctt-gttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
       ||||||||||||| ||||| | || ||||||||||| ||||| ||||||||||||||||||||    
T  35170 accgcttatcttgttt-tgctttggtatctctttgtgtggttttgctatacactagtctagggctg 35234  T

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Target: chr1 (Bit Score: 176; Significance: 7e-95; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 41398412 - 41398153
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  41398412 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt-cttgtaaccttttgtaa 41398314  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||      
T  41398313 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgacctgggtcaacaatcttctcggtgttttgttcttcctt-- 41398216  T
Q  201 ttgcttatcttgtttatgc-ttgttagctctttgtgtg--cttttgttatacactagtctagggctg 264  Q
       |||||||||||||||| ||| || |||||||||||   ||||| ||||||||||| ||||||||    
T  41398215 ---cttatcttgtttatgctttggtatctctttgtgtggttttttgctatacactagt-tagggctg 41398153  T

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Target: chr1; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 41390757 - 41390498
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  41390757 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt-cttgtaaccttttgtaa 41390659  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||      
T  41390658 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgatctgggtcaacaatcttctcgatgttttgttcttcctt-- 41390561  T
Q  201 ttgcttatcttgtttatgc-ttgttagctctttgtgtg--cttttgttatacactagtctagggctg 264  Q
       |||||||||||||||| ||| || |||||||||||   ||||| ||||||||||| ||||||||    
T  41390560 ---cttatcttgtttatgctttgatatctctttgtgtggttttttgctatacactagt-tagggctg 41390498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 25444998 - 25445263
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgta 99  Q
    ||||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||    
T  25444998 tagggttcatagtgtgagagtgggaaaataccaaagggtagc-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgta 25445095  T
Q  100 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |     
T  25445096 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcct 25445195  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |||   | |||||||||||| |||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  25445196 tttaccgtttatcttgtttacgcttgttagctctttgtgtggttttgctatacactagcttagggctg 25445263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 24787283 - 24787547
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  24787283 tagggttcatattgtgagagttgggaaacaccaaagggtagaatctaggatttgttcttgtgtaatgcttgaaggctattgtttcttgtaaccctttgta 24787382  T
Q  100 acactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-tt 198  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  24787383 acactttctcatattggattggagagctgctctcccccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttccttt 24787482  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||  ||| |||||| ||||||||||| ||||| | ||||  ||||||||||||    
T  24787483 tcttgcttatcttgtt--tgctttgttatctctttgtgtggttttgctctacataagtctagggctg 24787547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 3 - 264
Target Start/End: Original strand, 44023785 - 44024046
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||    
T  44023785 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaac 44023882  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt-ccttt 199  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  44023883 actt-cacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttt 44023981  T
Q  200 cttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
         ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  44023982 accatttatcttgtttatgcttgttagctctttgtgtggttttgctatacactagcttagggctg 44024046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 39445673 - 39445411
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||    
T  39445673 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaac 39445576  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctt 198  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  39445575 actt-cacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttt 39445477  T
Q  199 tcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |   | ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  39445476 taccgtttatcttgtttatgcttgttagctctttgtgtggttttgctatacactagcttagggctg 39445411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 264
Target Start/End: Original strand, 1054923 - 1055185
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||    
T  1054923 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaac 1055020  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctt 198  Q
    |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  1055021 actt-cacatattggattggagagttgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttt 1055119  T
Q  199 tcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |   | ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  1055120 taccgtttatcttgtttatgcttgttagctctttgtgtggttttgctatacactagcttagggctg 1055185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 24202689 - 24202904
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  24202689 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 24202787  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  24202788 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttcctt 24202887  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  24202888 tcttgcttatcttgttt 24202904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 19358763 - 19358975
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  19358763 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 19358861  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcc-t 197  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| | | ||| ||||||||||| |    
T  19358862 cactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt-ttgatgtgtttgttcttcctt 19358960  T
Q  198 ttcttgcttatcttg 212  Q
    |||||||||||||||    
T  19358961 ttcttgcttatcttg 19358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 19361352 - 19361564
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||     ||   ||||||||||| |||||||    
T  19361352 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttgtaa 19361450  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcc-t 197  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| | ||||| ||||||||||| |    
T  19361451 cactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt-ttggtgtgtttgttcttcctt 19361549  T
Q  198 ttcttgcttatcttg 212  Q
    |||||||||||||||    
T  19361550 ttcttgcttatcttg 19361564  T

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Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 19379992 - 19380204
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||     ||   ||||||||||| |||||||    
T  19379992 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttgtaa 19380090  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcc-t 197  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| | ||||| ||||||||||| |    
T  19380091 cactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt-ttggtgtgtttgttcttcctt 19380189  T
Q  198 ttcttgcttatcttg 212  Q
    |||||||||||||||    
T  19380190 ttcttgcttatcttg 19380204  T

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Target: chr1; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 194
Target Start/End: Original strand, 43988372 - 43988566
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgtt--catgtgtaaagcttgagg-gttagagttcttgtaac-cttttgt 98  Q
    ||||||||| ||||||  ||||||||  |||||||||||| |||||||||| ||  | ||||||||||||||   | |||| |||||||||| |||||||    
T  43988372 gggttcatagtgtgaggatgggaaaatgccaaagggtaga-tctagggttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgt 43988469  T
Q  99 aacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt 194  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||    
T  43988470 aacacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtaaacaatcttgcttggtgttttgttctt 43988566  T

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Target: chr1; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 26644897 - 26644994
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  26644897 ttcttgtaactctttgtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 26644994  T

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Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 47703946 - 47704033
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  47703946 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 47704033  T

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Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 19073026 - 19072928
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| || || |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  19073026 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19072928  T

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Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 19120916 - 19120818
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| || || |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  19120916 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19120818  T

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Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 16124515 - 16124613
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||| ||||||||||||    
T  16124515 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgagtcaacaatctt 16124613  T

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Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 27104371 - 27104469
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||||||| | |||||| ||||||||||||    
T  27104371 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtcaacaatctt 27104469  T

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Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 3281805 - 3281708
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||  |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||    
T  3281805 ttcttgtaactctttgtaacactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaataatctt 3281708  T

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Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 9476348 - 9476261
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||    
T  9476348 cttttgtaatactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatctt 9476261  T

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Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 13598485 - 13598398
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  13598485 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 13598398  T

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Target: chr1; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25439805 - 25439875
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttga 72  Q
    ||||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  25439805 tagggttcatagtgtgagagtgggaaaataccaaagggtag-ctctagggtttgttcatgtgtaaagcttga 25439875  T

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Target: chr1; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 29651898 - 29651811
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||| ||||||    
T  29651898 cttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattggaccgaactgggtcaaaaatctt 29651811  T

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Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 37069864 - 37069770
Alignment:
Q  85 ttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||  |||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  37069864 ttgtaactctttgtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 37069770  T

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Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 775759 - 775672
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| || || |||||||||||||| ||||||||||||||||||| |||||||| | ||| |||||||||||||||    
T  775759 cttttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatctt 775672  T

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Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 13604623 - 13604720
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    ||||||||||  ||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||| |||||||  |  ||||||||||||||||||    
T  13604623 ttcttgtaactctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 13604720  T

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Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 21536569 - 21536666
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggcca-tattggctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| | ||| |||||||||||||||||||||||||||||||||| || | ||  | |||||||||||||||||||    
T  21536569 ttcttgtaactctttgtaacactttcattatagtggattggagagctgctctctcccccagattaggtcattttttaccgaactgggtcaacaatctt 21536666  T

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Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 47098824 - 47098921
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || |||||||||| |||||||||||||||||||| || |||||||| | |||||||||||||||||||    
T  47098824 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattggaccgaactgggtcaacaatctt 47098921  T

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Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 32889536 - 32889439
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||| ||||||||| |||| |||||||| | ||||| | |||||||||||    
T  32889536 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattggaccgaactagatcaacaatctt 32889439  T

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Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19366228 - 19366292
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaa 65  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||  |||||| |||||||    
T  19366228 tagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 19366292  T

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Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 47102841 - 47102935
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    ||||||||||   |||||||| |||| || || |||||||||  |||||||||||||| |||||||| |||||||| | ||||||||||||||||    
T  47102841 ttcttgtaactcattgtaacattttcatcttagtggattggatggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaat 47102935  T

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Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 9459479 - 9459419
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9459479 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9459419  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 9463306 - 9463246
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9463306 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9463246  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 16226386 - 16226446
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16226386 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16226446  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 23786058 - 23786118
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  23786058 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 23786118  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 51752582 - 51752642
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  51752582 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 51752642  T

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Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 32 - 262
Target Start/End: Original strand, 44312563 - 44312794
Alignment:
Q  32 caaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctc 131  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44312563 caaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctc 44312662  T
Q  132 tctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc-tttcttgcttatcttgtttatgc-ttgttagctc 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||| ||| || |||    
T  44312663 tctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttttatcgcttatcttgttt-tgctttggtatctc 44312761  T
Q  230 tttgtgtgcttttgttatacactagtctagggc 262  Q
    |||||||| ||||| |||||||| |||||||||    
T  44312762 tttgtgtggttttgctatacacttgtctagggc 44312794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 39811897 - 39812094
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  39811897 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagt-cttgtaaccttttgtaa 39811995  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  39811996 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactggttcaacaatcttctcggtgttttgttctttcttt 39812094  T

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Target: chr2; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 11098846 - 11099110
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||   | ||  ||| ||||||||| ||||||    
T  11098846 tagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgcaagctattgtttcttgtaaccctttgta 11098944  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11098945 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 11099044  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |||| |||||||||||| ||| ||| || ||||||||||| ||||| | ||||||||||||||||||    
T  11099045 tcttccttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctg 11099110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 32246964 - 32246701
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||    
T  32246964 tagggttcatagtgtgagagtgggaaaataccaaagggtataatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaa 32246866  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttcc--- 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||       
T  32246865 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaacaaggtcaacaatcttgttcggtgttttgttcttccttt 32246766  T
Q  197 -tttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagg 260  Q
     ||||||||||||||||||||||| |||  | ||| ||||||| ||||| ||||||||||||||||    
T  32246765 ttttcttgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagtctagg 32246701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 14291666 - 14291402
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||| |||||| ||||||| |||||| || ||  ||| ||||||||| ||||||    
T  14291666 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 14291568  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14291567 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 14291468  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    ||||||||||||||||| ||| |||||| ||||||||||| ||||| | |||| |||||||||||||    
T  14291467 tcttgcttatcttgttt-tgctttgttatctctttgtgtggttttgctctacattagtctagggctg 14291402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 9296320 - 9296584
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagtt-cttgtaaccttttgta 99  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||| |||||| ||| ||| |||||| || ||  ||| ||||||||| ||||||    
T  9296320 tagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtataa-gcttgaaggctattgtttcttgtaaccctttgta 9296418  T
Q  100 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctt 198  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9296419 acactttcatcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcctt 9296518  T
Q  199 tcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |||||||| |||||||| ||| |||||| ||||||||||| ||||| | |||||||| |||||||||    
T  9296519 tcttgcttttcttgttt-tgctttgttatctctttgtgtggttttgctctacactagactagggctg 9296584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 3491927 - 3491716
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  3491927 tagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 3491829  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  3491828 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ttggtgtgtttgttcttcctt 3491730  T
Q  199 tcttgcttatcttg 212  Q
    ||||||||||||||    
T  3491729 tcttgcttatcttg 3491716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 19344596 - 19344347
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||| |||||||||| |||||||||    
T  19344596 gggttcatagtgtgagggtgggaaaataccaaagggtagg-tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaa 19344499  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---cc 196  Q
    ||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||   |     
T  19344498 cacattcacatattggattggagagctgctctctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttcct 19344399  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  19344398 tttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 19344347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 19349454 - 19349205
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| |||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||| |||||||||| |||||||||    
T  19349454 gggttcatagtgtgagggtgggaaaataccaaagggtagg-tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaa 19349357  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---cc 196  Q
    ||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||   |     
T  19349356 cacattcacatattggattggagagctgctctctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttcct 19349257  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  19349256 tttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 19349205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 25398672 - 25398457
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||  |||||| || |||||||| |||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  25398672 tagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 25398574  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  25398573 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgggtcaacaatctttttggtgtgtttgttcttcctt 25398474  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  25398473 tcttgcttatcttgttt 25398457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 25403810 - 25403595
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||  |||||| || |||||||| |||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  25403810 tagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 25403712  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||| |||||||||||||    
T  25403711 cactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgagtcaacaatctttttggtgtgtttgttcttcctt 25403612  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  25403611 tcttgcttatcttgttt 25403595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 40738926 - 40738810
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttc 192  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctc-cccccagattaggtcatattggctgaactgggtcaacaatctt-ttggtgtgtttgttc 40738829  T
Q  193 ttcctttcttgcttatctt 211  Q
    ||||||||| |||||||||    
T  40738828 ttcctttctagcttatctt 40738810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 8040147 - 8040060
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  8040147 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactgggtcaacaatctt 8040060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 25407799 - 25407653
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||  |||||| || |||||||| |||||  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  25407799 tagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 25407701  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattagg 147  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  25407700 cactttcatcatagtggattggagagctgctctctcccccagattagg 25407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 13569426 - 13569331
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  13569426 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 13569331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 21630041 - 21629944
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  21630041 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactgggtcaacaatctt 21629944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 28259177 - 28259274
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||||||    
T  28259177 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaacaatctt 28259274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 10445443 - 10445541
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||| |||||||||||    
T  10445443 ttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatctt 10445541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 17865301 - 17865203
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatatt-ggctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||| |||||| | |||||||||||||||||||||    
T  17865301 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattcgactgaactgggtcaacaatctt 17865203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 20522318 - 20522220
Alignment:
Q  82 ttcttgtaacc-ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  20522318 ttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 20522220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 34682333 - 34682431
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||    
T  34682333 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatctt 34682431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 34388956 - 34388859
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||| ||||||||||||||    
T  34388956 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatct 34388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 14699007 - 14699104
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  14699007 ttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 14699104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 10707251 - 10707348
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||| || ||||||||||| |||||| |||||||| | ||||||||||||||||||    
T  10707251 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggaccgaactgggtcaacaatct 10707348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 8390149 - 8390244
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    |||||||||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| |||| | ||||||||||||||||    
T  8390149 ttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttggaccgaactgggtcaacaat 8390244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 31056131 - 31056044
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| || || ||||||||||||||||||||||||| |||||||| |||||||  | ||||| |||||||||||||    
T  31056131 cttttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattgaaccgaactaggtcaacaatctt 31056044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 33528620 - 33528718
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||  |||| |||||| |||||||| | |||||||||||||||||||    
T  33528620 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattggaccgaactgggtcaacaatctt 33528718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 39483029 - 39482931
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||  ||||||||||||||| |||||| |||||||| | ||||| |||||||||||||    
T  39483029 ttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattggaccgaactaggtcaacaatctt 39482931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 23078470 - 23078567
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatctt 177  Q
    ||||||||||  ||| |||||||||| ||||| |||||||||||| || ||||||||||| |||||| |||||||| | |||||||||||||| ||||    
T  23078470 ttcttgtaactctttctaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggatcgaactgggtcaacattctt 23078567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 42039669 - 42039766
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  || ||||||||||| ||||| |||||| ||||||||||||||||| ||||||||| |||||||| | ||||| | |||||||||||    
T  42039669 ttcttgtaactcttcgtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattggaccgaactagatcaacaatctt 42039766  T

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Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 16940219 - 16940306
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| |||||||||| |||| ||| |||||||||||| | |||||||| | ||| |||||||||||||||    
T  16940219 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatctt 16940306  T

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Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 17010884 - 17010971
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| |||||||||| |||| ||| |||||||||||| | |||||||| | ||| |||||||||||||||    
T  17010884 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatctt 17010971  T

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Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 33118222 - 33118136
Alignment:
Q  93 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||| ||||| ||||| |||||||||| |||||||||||||||| |||||| |||||||| | |||||| | ||||||||||    
T  33118222 ttttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattggaccgaactgagccaacaatctt 33118136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 36757774 - 36757859
Alignment:
Q  94 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||| ||||||||| ||||| ||||||||||||||| | || ||||||||||||| |||||||| | ||| |||||||||||||||    
T  36757774 tttgaaacactttcatcatactggattggagagctgttatcccccccagattaggtcatattggaccgaattgggtcaacaatctt 36757859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 2838063 - 2838136
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttctcggtgttt 187  Q
    |||||||||||  |||||||||||||||| |||| |||||||| | |||||||||||||||| |||| |||||||    
T  2838063 tggattggagatgtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat-ttcttggtgttt 2838136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 1345574 - 1345635
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    ||||| |||||| |||||||||||||||| |||| |||||||| | ||||||||||||||||    
T  1345574 tggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat 1345635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 35215646 - 35215586
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  35215646 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35215586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 35218023 - 35217963
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  35218023 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35217963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 2869692 - 2869787
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    |||||||||| | |||||| ||||||| || || |||||||||||||| |||||||||| ||| |||| |||||||| | ||||||||| ||||||    
T  2869692 ttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattggaccgaactgggtaaacaat 2869787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 27149306 - 27149369
Alignment:
Q  94 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 156  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  27149306 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 27149369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40739009 - 40738940
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttg 71  Q
    |||||||||||||||||||||||| |||||| || |||||||| ||| |  |||||| ||||| |||||||    
T  40739009 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactaagacttgttcttgtgt-aagcttg 40738940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 45332238 - 45332181
Alignment:
Q  117 attggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  45332238 attggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 45332181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 23452297 - 23452237
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  23452297 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 23452237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 36558924 - 36558864
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  36558924 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 36558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 36561201 - 36561141
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  36561201 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 36561141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 536 - 274
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaaccttttgtaac 101  Q
    ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||   | |||||| ||||||||||||||||||    
T  536 gggttcatagtgtgagagtgggaaaataccaaagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaac 439  T
Q  102 actttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt--cctt 198  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | ||    
T  438 actt-cacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttt 340  T
Q  199 tcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttatacactagtctagggctg 264  Q
    |   | ||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  339 taccgtttatcttgtttatgcttgttagctctttgtgtggttttgctatacactagcttagggctg 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 17872 - 18087
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||| ||| |  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  17872 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 17970  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  17971 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttcctt 18070  T
Q  199 tcttgcttatcttgttt 215  Q
    |||||||||||||||||    
T  18071 tcttgcttatcttgttt 18087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 23965 - 24180
Alignment:
Q  1 tagggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagggttagagttcttgtaaccttttgtaa 100  Q
    |||||||||||||||||||||||| |||||| || |||||||| ||| |  |||||| ||||||| |||||   | ||   ||||||||||| |||||||    
T  23965 tagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttgtaa 24063  T
Q  101 cactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgt-tttgttcttcctt 198  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  24064 cactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttcctt 24163  T
Q  199 tcttgcttatcttgttt 215  Q
    |||| ||||||||||||    
T  24164 tctttcttatcttgttt 24180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 2161 - 2409
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||| |||| |||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  2161 gggttcatagtgtgaggttgggaaattaccaaagggtaga-tctatggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 2258  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcc 196  Q
    ||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||   ||||    
T  2259 cacattcacatattggattggagagctactctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcc 2357  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  2358 tttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 2409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 148866 - 149114
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||| |||| |||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  148866 gggttcatagtgtgaggttgggaaattaccaaagggtaga-tctatggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 148963  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcc 196  Q
    ||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||   ||||    
T  148964 cacattcacatattggattggagagctactctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcc 149062  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  149063 tttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 149114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 14219 - 14455
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||  ||||||||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  14219 gggttcatagtgtgaggttgggaaattaccaaagggtagg-tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 14316  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcc 196  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||   |||     
T  14317 cacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttct 14416  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||| | | ||||||||  ||||||||||||||||| |||||    
T  14417 tttatcgtttatcttg--tatgcttgttagctcttagtgtg 14455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 250
Target Start/End: Original strand, 19075 - 19323
Alignment:
Q  3 gggttcatattgtgagagtgggaaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgagg-gttagagttcttgtaac-cttttgtaa 100  Q
    ||||||||| ||||||  |||||||  ||||||||||||| ||||||||||  || ||||||||||||||   | |||| |||||||||| |||||||||    
T  19075 gggttcatagtgtgaggttgggaaattaccaaagggtaga-tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaa 19172  T
Q  101 cactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcc 196  Q
    |||  || ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| |||||||   |||     
T  19173 cacactcacatattgtattggagagctgctctctcccccagattaggccacaatggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttct 19271  T
Q  197 tttcttgcttatcttgtttatgcttgttagctctttgtgtgcttttgttataca 250  Q
    ||| | | ||||||||  ||||||||||||||||| ||||| ||||| ||||||    
T  19272 tttatcgtttatcttg--tatgcttgttagctcttagtgtggttttgctataca 19323  T

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Target: scaffold0009 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 181980 - 182110
Alignment:
Q  109 catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc---ttcctttcttgc 204  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||   ||| ||| | |     
T  181980 catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgt 182079  T
Q  205 ttatcttgtttatgcttgttagctctttgtgtg 237  Q
    ||||||||  ||||||||||||||||| |||||    
T  182080 ttatcttg--tatgcttgttagctcttagtgtg 182110  T

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Target: scaffold0140 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 8419 - 8516
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  8419 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8516  T

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Target: scaffold0140; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 22343 - 22403
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22343 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22403  T

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Target: scaffold0140; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 24618 - 24678
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  24618 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 24678  T

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Target: scaffold0978 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 300 - 419
Alignment:
Q  145 aggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcctttcttgcttatcttgtttatgc-ttgttagctctttgtgtgcttttg 243  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||||||||||||| ||| || ||| ||||||||||| |||||    
T  300 aggccatattggctgaactaggtcaacaatcttcttggtgttttgttctttctttctagcttatcttgttt-tgctttattatctctttgtgtggttttg 398  T
Q  244 ttatacactagtctagggctg 264  Q
     |   ||||||| ||||||||    
T  399 ctcctcactagtttagggctg 419  T

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Target: scaffold0036 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 85780 - 85684
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 176  Q
    ||||||||||  |||||||||||||| ||||  ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  85780 ttcttgtaactctttgtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactgggtcaacaatct 85684  T

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Target: scaffold0087 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 43961 - 44058
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||  |||||||| | |||||||||||||||||||    
T  43961 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattggaccgaactgggtcaacaatctt 44058  T

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Target: scaffold0087; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 36832 - 36929
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    ||||||||||  |||||||||||||| ||||| ||| |||| |||||||||||| ||| |||||||| |||||||| | |||||||||||||||||||    
T  36832 ttcttgtaactctttgtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcatattggaccgaactgggtcaacaatctt 36929  T

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Target: scaffold0006 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 5770 - 5683
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  5770 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 5683  T

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Target: scaffold0006; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 2579 - 2492
Alignment:
Q  92 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||| ||||||||   |||||||||||||||||||    
T  2579 cttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattggagcgaactgggtcaacaatctt 2492  T

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Target: scaffold0006; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 133280 - 133377
Alignment:
Q  82 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    ||||||||||  ||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||| |||||||  |  ||||||||||||||||||    
T  133280 ttcttgtaactctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 133377  T

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Target: scaffold0148 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 10827 - 10729
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 177  Q
    |||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||| ||||||    
T  10827 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaataatctt 10729  T

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Target: scaffold0098 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 45337 - 45253
Alignment:
Q  95 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 177  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||  | |||||| ||||||||||||    
T  45337 ttgtaacgctttcatcatagtggattggagagctgctctctcccccagattaggtcatattgaaccgaactgagtcaacaatctt 45253  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 17361 - 17266
Alignment:
Q  82 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 174  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||  |||| |||||| |||||||  | ||||||||||||||||    
T  17361 ttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattgaaccgaactgggtcaacaat 17266  T

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Target: scaffold0267 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 269 - 329
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  269 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 329  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 147
Target Start/End: Complemental strand, 11533 - 11500
Alignment:
Q  114 tggattggagagctgctctctcccccagattagg 147  Q
    ||||||||||||||||||||||||||||| ||||    
T  11533 tggattggagagctgctctctcccccagactagg 11500  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 69352 - 69292
Alignment:
Q  114 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 173  Q
    ||||| ||||||||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  69352 tggatcggagagctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 69292  T

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