View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4659_low_10 (Length: 271)
Name: NF4659_low_10
Description: NF4659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4659_low_10 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 6804541 - 6804457
Alignment:
| Q |
70 |
caatcttaagagtattttcattgaagtttcattgatatagaattaattataatcaagaattattatactggttttattcatataa |
154 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6804541 |
caatcttaagagcattttcatcgaagtttcattgatatagaattaattataatcaagaattattatactggttttattcatataa |
6804457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University