View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4659_low_12 (Length: 251)

Name: NF4659_low_12
Description: NF4659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4659_low_12
NF4659_low_12
[»] scaffold0188 (1 HSPs)
scaffold0188 (11-249)||(17468-17705)
[»] chr1 (33 HSPs)
chr1 (11-239)||(19360949-19361177)
chr1 (11-239)||(51765027-51765255)
chr1 (11-193)||(19365805-19365987)
chr1 (15-169)||(20622626-20622780)
chr1 (15-194)||(9986826-9987005)
chr1 (15-194)||(40281999-40282179)
chr1 (15-194)||(21053580-21053760)
chr1 (11-194)||(24202288-24202450)
chr1 (37-169)||(24793709-24793841)
chr1 (57-169)||(24786907-24787019)
chr1 (11-139)||(13604132-13604260)
chr1 (11-160)||(41391001-41391149)
chr1 (37-160)||(41398656-41398778)
chr1 (15-155)||(9036043-9036183)
chr1 (11-129)||(26644410-26644528)
chr1 (11-160)||(39445897-39446046)
chr1 (15-196)||(44203258-44203437)
chr1 (11-160)||(44023413-44023562)
chr1 (180-233)||(24202455-24202508)
chr1 (37-160)||(25439461-25439584)
chr1 (69-160)||(1054608-1054699)
chr1 (39-121)||(31658880-31658962)
chr1 (37-121)||(20762310-20762395)
chr1 (37-160)||(25444654-25444777)
chr1 (181-239)||(19358530-19358588)
chr1 (83-160)||(43988057-43988134)
chr1 (70-122)||(28220670-28220722)
chr1 (70-122)||(28223865-28223917)
chr1 (70-106)||(3156540-3156576)
chr1 (39-122)||(11348143-11348226)
chr1 (63-121)||(49918015-49918073)
chr1 (84-129)||(37070237-37070282)
chr1 (39-123)||(37879551-37879635)
[»] chr7 (59 HSPs)
chr7 (11-194)||(21646423-21646606)
chr7 (11-239)||(48408435-48408663)
chr7 (15-234)||(43504461-43504680)
chr7 (11-194)||(39730970-39731153)
chr7 (14-193)||(25767327-25767506)
chr7 (11-193)||(18409180-18409362)
chr7 (11-193)||(18414056-18414238)
chr7 (15-169)||(24789467-24789621)
chr7 (18-171)||(1532947-1533100)
chr7 (11-249)||(21640152-21640387)
chr7 (11-194)||(2058388-2058568)
chr7 (11-249)||(20357064-20357298)
chr7 (15-234)||(32060631-32060848)
chr7 (11-139)||(2479795-2479923)
chr7 (12-139)||(47264102-47264229)
chr7 (11-169)||(12406664-12406821)
chr7 (11-155)||(4873541-4873685)
chr7 (33-234)||(20343558-20343756)
chr7 (15-196)||(6592702-6592881)
chr7 (15-196)||(6594918-6595097)
chr7 (31-196)||(18392561-18392724)
chr7 (11-160)||(24023855-24024004)
chr7 (73-196)||(18389125-18389246)
chr7 (83-196)||(1562368-1562479)
chr7 (31-160)||(21811795-21811924)
chr7 (180-239)||(21646359-21646418)
chr7 (11-90)||(44847656-44847735)
chr7 (11-129)||(21983712-21983830)
chr7 (83-160)||(24260929-24261006)
chr7 (180-234)||(1562310-1562364)
chr7 (69-155)||(31109165-31109251)
chr7 (32-121)||(2361602-2361691)
chr7 (37-121)||(4178413-4178498)
chr7 (36-129)||(21989377-21989469)
chr7 (83-160)||(24265785-24265862)
chr7 (9-122)||(23554651-23554764)
chr7 (180-239)||(39731177-39731236)
chr7 (95-169)||(12397312-12397385)
chr7 (180-249)||(25767253-25767321)
chr7 (180-239)||(18409115-18409174)
chr7 (180-234)||(6592644-6592698)
chr7 (180-234)||(6594860-6594914)
chr7 (180-234)||(18389067-18389121)
chr7 (180-234)||(18392503-18392557)
chr7 (83-160)||(16880475-16880552)
chr7 (83-160)||(16885330-16885407)
chr7 (70-122)||(4538994-4539046)
chr7 (70-122)||(47674386-47674438)
chr7 (70-122)||(47676579-47676631)
chr7 (67-131)||(49092159-49092223)
chr7 (180-234)||(2058328-2058383)
chr7 (63-122)||(6360573-6360632)
chr7 (180-249)||(24789649-24789717)
chr7 (37-123)||(32358496-32358582)
chr7 (39-122)||(48599939-48600022)
chr7 (70-124)||(4796238-4796292)
chr7 (11-48)||(1532921-1532958)
chr7 (44-97)||(2761749-2761802)
chr7 (70-106)||(27347597-27347633)
[»] scaffold0491 (3 HSPs)
scaffold0491 (11-239)||(9044-9271)
scaffold0491 (11-194)||(11534-11716)
scaffold0491 (180-239)||(11470-11529)
[»] chr8 (48 HSPs)
chr8 (14-194)||(1261454-1261634)
chr8 (11-193)||(26288298-26288480)
chr8 (11-193)||(26301555-26301737)
chr8 (11-193)||(26313549-26313731)
chr8 (11-249)||(33037323-33037558)
chr8 (11-194)||(4759570-4759751)
chr8 (15-153)||(2627359-2627497)
chr8 (11-169)||(18852663-18852821)
chr8 (11-169)||(30656088-30656246)
chr8 (11-194)||(36979797-36979978)
chr8 (11-169)||(18870057-18870215)
chr8 (11-155)||(3439124-3439267)
chr8 (11-160)||(10683775-10683924)
chr8 (11-139)||(7412787-7412915)
chr8 (11-197)||(6311716-6311899)
chr8 (15-234)||(15290183-15290401)
chr8 (15-234)||(15470552-15470770)
chr8 (12-97)||(31042946-31043031)
chr8 (37-197)||(10688661-10688818)
chr8 (11-168)||(7289463-7289620)
chr8 (37-168)||(25689604-25689734)
chr8 (11-169)||(25327700-25327857)
chr8 (15-196)||(42575689-42575869)
chr8 (11-160)||(39784361-39784510)
chr8 (180-239)||(26288233-26288292)
chr8 (180-239)||(26301490-26301549)
chr8 (180-239)||(26313484-26313543)
chr8 (9-121)||(1746663-1746775)
chr8 (180-233)||(25689764-25689817)
chr8 (83-160)||(35745793-35745870)
chr8 (180-239)||(31043131-31043190)
chr8 (37-122)||(43036062-43036148)
chr8 (37-121)||(19945784-19945869)
chr8 (37-121)||(31217895-31217980)
chr8 (39-122)||(42435652-42435736)
chr8 (180-231)||(36979741-36979792)
chr8 (179-234)||(42575631-42575686)
chr8 (70-131)||(5702048-5702109)
chr8 (31-123)||(22975950-22976042)
chr8 (37-121)||(34256949-34257033)
chr8 (180-251)||(2627543-2627612)
chr8 (70-122)||(15212459-15212511)
chr8 (121-193)||(31043034-31043106)
chr8 (197-249)||(1261656-1261707)
chr8 (60-122)||(4733488-4733550)
chr8 (82-120)||(7289629-7289667)
chr8 (74-131)||(19175305-19175362)
chr8 (70-122)||(30143015-30143067)
[»] chr5 (71 HSPs)
chr5 (11-239)||(16407678-16407906)
chr5 (14-194)||(24136266-24136444)
chr5 (11-239)||(16409114-16409342)
chr5 (15-233)||(29720006-29720225)
chr5 (15-193)||(26170398-26170576)
chr5 (15-193)||(26177507-26177685)
chr5 (15-193)||(18442014-18442192)
chr5 (15-155)||(9789628-9789768)
chr5 (55-195)||(38219809-38219949)
chr5 (11-169)||(27445373-27445530)
chr5 (11-169)||(27450216-27450373)
chr5 (11-160)||(30631763-30631912)
chr5 (11-139)||(9352844-9352972)
chr5 (15-153)||(29722193-29722332)
chr5 (11-97)||(15465002-15465088)
chr5 (104-194)||(35388079-35388169)
chr5 (15-234)||(22536596-22536812)
chr5 (11-169)||(1456674-1456831)
chr5 (11-97)||(36931880-36931966)
chr5 (11-160)||(15045095-15045243)
chr5 (11-169)||(43599124-43599282)
chr5 (11-169)||(43604616-43604774)
chr5 (11-169)||(43610108-43610266)
chr5 (31-196)||(16546272-16546435)
chr5 (31-196)||(40379734-40379897)
chr5 (31-196)||(40381945-40382108)
chr5 (58-169)||(43592679-43592789)
chr5 (11-153)||(29402586-29402728)
chr5 (74-196)||(16544093-16544213)
chr5 (15-97)||(29752267-29752349)
chr5 (15-155)||(10592884-10593023)
chr5 (104-195)||(29751526-29751615)
chr5 (37-169)||(31180656-31180787)
chr5 (82-196)||(25077813-25077925)
chr5 (82-196)||(25135782-25135894)
chr5 (15-97)||(29751601-29751683)
chr5 (37-160)||(28807138-28807261)
chr5 (83-160)||(2785777-2785854)
chr5 (83-160)||(33768586-33768663)
chr5 (83-160)||(33791718-33791795)
chr5 (180-251)||(9789515-9789584)
chr5 (180-251)||(18441939-18442008)
chr5 (67-129)||(11916537-11916599)
chr5 (182-239)||(26170584-26170641)
chr5 (82-155)||(37556232-37556305)
chr5 (82-155)||(37561054-37561127)
chr5 (180-251)||(29722332-29722401)
chr5 (70-122)||(42426678-42426730)
chr5 (180-239)||(26177691-26177750)
chr5 (197-244)||(35388010-35388057)
chr5 (180-234)||(25077929-25077983)
chr5 (180-234)||(25135898-25135952)
chr5 (53-86)||(35388166-35388199)
chr5 (44-120)||(28751027-28751103)
chr5 (180-231)||(43599043-43599095)
chr5 (180-231)||(43604535-43604587)
chr5 (180-231)||(43610027-43610079)
chr5 (180-239)||(15464875-15464934)
chr5 (180-238)||(24136202-24136261)
chr5 (180-239)||(36932046-36932105)
chr5 (70-121)||(42428862-42428913)
chr5 (67-121)||(213014-213068)
chr5 (180-234)||(10593066-10593120)
chr5 (39-97)||(19806069-19806127)
chr5 (69-122)||(5057503-5057556)
chr5 (180-232)||(27445291-27445344)
chr5 (180-232)||(27450134-27450187)
chr5 (180-251)||(29751451-29751521)
chr5 (83-160)||(31396598-31396675)
chr5 (83-160)||(31401455-31401532)
chr5 (180-232)||(43592597-43592650)
[»] chr6 (50 HSPs)
chr6 (11-234)||(2171844-2172067)
chr6 (11-194)||(5674266-5674447)
chr6 (11-193)||(22709426-22709608)
chr6 (16-170)||(3073147-3073301)
chr6 (15-191)||(411726-411903)
chr6 (37-230)||(5266418-5266610)
chr6 (11-169)||(11857374-11857531)
chr6 (15-234)||(6097747-6097945)
chr6 (11-142)||(30125054-30125185)
chr6 (15-155)||(16578921-16579061)
chr6 (15-155)||(16616319-16616459)
chr6 (11-169)||(14741962-14742119)
chr6 (11-169)||(22010225-22010382)
chr6 (11-139)||(23896792-23896920)
chr6 (15-234)||(27647508-27647724)
chr6 (15-196)||(34166706-34166886)
chr6 (12-139)||(5756989-5757116)
chr6 (15-196)||(25420837-25421016)
chr6 (15-196)||(13150889-13151069)
chr6 (11-97)||(26253626-26253712)
chr6 (37-169)||(14737128-14737259)
chr6 (31-155)||(16554510-16554634)
chr6 (31-155)||(16631066-16631190)
chr6 (15-196)||(33342468-33342648)
chr6 (15-196)||(6136328-6136507)
chr6 (37-155)||(16652759-16652877)
chr6 (15-196)||(34164484-34164664)
chr6 (37-160)||(28155133-28155256)
chr6 (83-160)||(5343879-5343956)
chr6 (83-171)||(16839135-16839222)
chr6 (180-234)||(5674452-5674507)
chr6 (82-196)||(6026941-6027053)
chr6 (14-160)||(6438898-6439044)
chr6 (82-196)||(25420999-25421110)
chr6 (83-160)||(6005821-6005898)
chr6 (83-160)||(33330041-33330118)
chr6 (83-160)||(33335538-33335615)
chr6 (180-234)||(3073064-3073118)
chr6 (37-122)||(3809367-3809452)
chr6 (67-131)||(31086037-31086101)
chr6 (104-195)||(26253698-26253789)
chr6 (179-234)||(33342410-33342465)
chr6 (180-234)||(411911-411965)
chr6 (180-234)||(6027057-6027111)
chr6 (180-234)||(25421114-25421168)
chr6 (67-128)||(5017060-5017121)
chr6 (180-234)||(6136271-6136324)
chr6 (39-121)||(10076729-10076811)
chr6 (37-121)||(5407353-5407437)
chr6 (37-121)||(5411678-5411762)
[»] chr2 (28 HSPs)
chr2 (11-193)||(25410047-25410229)
chr2 (11-193)||(32289185-32289367)
chr2 (11-193)||(3492158-3492340)
chr2 (11-193)||(30832958-30833140)
chr2 (11-194)||(4484703-4484886)
chr2 (11-195)||(40739236-40739420)
chr2 (11-194)||(9295898-9296079)
chr2 (15-153)||(6266315-6266453)
chr2 (11-194)||(11098423-11098604)
chr2 (11-194)||(14291908-14292089)
chr2 (37-139)||(28258713-28258815)
chr2 (15-196)||(12647748-12647927)
chr2 (11-155)||(39811513-39811657)
chr2 (180-234)||(4484644-4484698)
chr2 (67-131)||(33528189-33528253)
chr2 (180-250)||(6266499-6266567)
chr2 (180-251)||(40739161-40739232)
chr2 (69-131)||(34389318-34389380)
chr2 (83-160)||(19344824-19344901)
chr2 (83-160)||(19349682-19349759)
chr2 (180-234)||(12647690-12647744)
chr2 (70-123)||(2837286-2837339)
chr2 (74-129)||(39483346-39483401)
chr2 (86-131)||(8389732-8389777)
chr2 (74-131)||(10706825-10706882)
chr2 (69-122)||(29867551-29867604)
chr2 (85-122)||(39284585-39284622)
chr2 (11-51)||(44310507-44310547)
[»] chr4 (43 HSPs)
chr4 (11-193)||(28468014-28468196)
chr4 (11-194)||(13992659-13992842)
chr4 (15-172)||(31495704-31495861)
chr4 (37-234)||(29761000-29761196)
chr4 (11-165)||(24742387-24742541)
chr4 (11-169)||(9223935-9224092)
chr4 (11-169)||(9228722-9228879)
chr4 (11-194)||(56141547-56141728)
chr4 (11-155)||(51520870-51521014)
chr4 (14-169)||(18712294-18712448)
chr4 (11-160)||(5733061-5733211)
chr4 (15-196)||(7122307-7122486)
chr4 (11-97)||(31985164-31985250)
chr4 (15-155)||(7124529-7124669)
chr4 (15-196)||(5135689-5135869)
chr4 (15-196)||(5137915-5138095)
chr4 (14-160)||(45347356-45347502)
chr4 (15-155)||(8393022-8393162)
chr4 (15-155)||(8395231-8395371)
chr4 (38-160)||(45356861-45356983)
chr4 (11-160)||(18856124-18856273)
chr4 (11-160)||(3814421-3814569)
chr4 (12-128)||(5148148-5148264)
chr4 (37-129)||(5143730-5143823)
chr4 (39-122)||(46570187-46570270)
chr4 (67-133)||(3778014-3778080)
chr4 (180-234)||(13992600-13992654)
chr4 (70-136)||(16628440-16628506)
chr4 (83-131)||(8689078-8689126)
chr4 (180-251)||(31495608-31495677)
chr4 (39-122)||(2209144-2209227)
chr4 (39-122)||(26176067-26176150)
chr4 (68-131)||(38152003-38152066)
chr4 (67-122)||(54882492-54882547)
chr4 (37-121)||(5370520-5370605)
chr4 (39-122)||(6655379-6655463)
chr4 (74-129)||(5268772-5268827)
chr4 (180-239)||(31985331-31985390)
chr4 (82-120)||(56141713-56141751)
chr4 (70-123)||(5429353-5429406)
chr4 (84-124)||(27417610-27417650)
chr4 (180-239)||(28468220-28468282)
chr4 (69-121)||(52095805-52095857)
[»] scaffold0286 (2 HSPs)
scaffold0286 (11-234)||(21976-22199)
scaffold0286 (39-122)||(10981-11065)
[»] chr3 (82 HSPs)
chr3 (11-239)||(26928117-26928345)
chr3 (11-195)||(23198309-23198493)
chr3 (11-193)||(1306385-1306567)
chr3 (11-195)||(23200508-23200692)
chr3 (31-243)||(2671121-2671332)
chr3 (11-139)||(33386174-33386302)
chr3 (15-153)||(800726-800864)
chr3 (11-194)||(8477785-8477966)
chr3 (37-195)||(32143726-32143884)
chr3 (11-165)||(40372292-40372446)
chr3 (8-139)||(27453416-27453547)
chr3 (11-139)||(37726134-37726262)
chr3 (11-169)||(7167688-7167846)
chr3 (37-139)||(27986001-27986103)
chr3 (11-169)||(28503355-28503512)
chr3 (11-195)||(27352117-27352299)
chr3 (11-160)||(22172698-22172847)
chr3 (15-155)||(6716125-6716265)
chr3 (57-168)||(8738605-8738716)
chr3 (57-168)||(9090843-9090954)
chr3 (11-160)||(18656843-18656993)
chr3 (11-169)||(28501188-28501345)
chr3 (15-155)||(54634750-54634890)
chr3 (37-155)||(6718331-6718449)
chr3 (15-97)||(7782589-7782671)
chr3 (31-234)||(10208834-10209036)
chr3 (15-196)||(10058067-10058247)
chr3 (15-196)||(10060289-10060469)
chr3 (15-196)||(10062511-10062691)
chr3 (15-196)||(10064733-10064913)
chr3 (37-155)||(45282628-45282746)
chr3 (14-139)||(37408076-37408200)
chr3 (15-196)||(4598887-4599067)
chr3 (15-196)||(4601108-4601288)
chr3 (15-196)||(10055845-10056025)
chr3 (15-196)||(10066955-10067135)
chr3 (15-196)||(3617074-3617253)
chr3 (15-196)||(25637053-25637232)
chr3 (37-137)||(27974477-27974577)
chr3 (15-196)||(10211018-10211198)
chr3 (104-194)||(7782513-7782603)
chr3 (83-161)||(32475885-32475963)
chr3 (83-161)||(32480743-32480821)
chr3 (180-239)||(1306301-1306360)
chr3 (83-160)||(2672527-2672604)
chr3 (83-160)||(8512642-8512719)
chr3 (83-160)||(8517522-8517599)
chr3 (67-131)||(21711669-21711733)
chr3 (67-131)||(40735097-40735161)
chr3 (180-231)||(8477729-8477780)
chr3 (180-239)||(23198246-23198305)
chr3 (180-234)||(7782454-7782508)
chr3 (67-129)||(40734166-40734228)
chr3 (83-160)||(2676683-2676760)
chr3 (37-121)||(5258589-5258674)
chr3 (83-160)||(24968519-24968596)
chr3 (67-131)||(8370044-8370108)
chr3 (67-127)||(16264820-16264880)
chr3 (67-131)||(27027174-27027238)
chr3 (67-131)||(30709350-30709414)
chr3 (67-131)||(36029561-36029625)
chr3 (39-122)||(49200112-49200196)
chr3 (180-234)||(4598829-4598883)
chr3 (180-234)||(4601050-4601104)
chr3 (180-234)||(10211202-10211256)
chr3 (67-131)||(47923457-47923521)
chr3 (70-122)||(51398499-51398551)
chr3 (67-122)||(6096261-6096316)
chr3 (180-239)||(23200445-23200504)
chr3 (180-239)||(27453298-27453357)
chr3 (70-121)||(29812736-29812787)
chr3 (180-239)||(32143663-32143722)
chr3 (180-249)||(800910-800977)
chr3 (9-121)||(3393217-3393330)
chr3 (67-129)||(27038511-27038573)
chr3 (67-129)||(35925960-35926022)
chr3 (84-122)||(36018331-36018369)
chr3 (180-234)||(54634933-54634986)
chr3 (82-111)||(28503520-28503549)
chr3 (74-131)||(39032117-39032174)
chr3 (37-121)||(45094803-45094887)
chr3 (67-115)||(46173186-46173234)
[»] scaffold1519 (1 HSPs)
scaffold1519 (9-195)||(517-703)
[»] scaffold0140 (1 HSPs)
scaffold0140 (11-97)||(7948-8034)
[»] scaffold0355 (1 HSPs)
scaffold0355 (12-160)||(3374-3522)
[»] scaffold0006 (1 HSPs)
scaffold0006 (11-139)||(132789-132917)
[»] scaffold0087 (2 HSPs)
scaffold0087 (12-139)||(43472-43599)
scaffold0087 (45-131)||(36376-36462)
[»] scaffold0510 (1 HSPs)
scaffold0510 (11-139)||(1120-1248)
[»] scaffold0565 (2 HSPs)
scaffold0565 (15-196)||(2966-3145)
scaffold0565 (180-234)||(2908-2962)
[»] scaffold0135 (1 HSPs)
scaffold0135 (11-169)||(34590-34747)
[»] scaffold0665 (1 HSPs)
scaffold0665 (37-169)||(8099-8230)
[»] scaffold0674 (2 HSPs)
scaffold0674 (31-196)||(4091-4254)
scaffold0674 (180-234)||(4033-4087)
[»] scaffold0098 (1 HSPs)
scaffold0098 (37-131)||(45666-45760)
[»] scaffold0464 (1 HSPs)
scaffold0464 (11-160)||(760-909)
[»] scaffold0137 (2 HSPs)
scaffold0137 (57-196)||(5940-6079)
scaffold0137 (180-234)||(6083-6137)
[»] scaffold0197 (2 HSPs)
scaffold0197 (83-160)||(13892-13969)
scaffold0197 (83-161)||(18772-18850)
[»] scaffold0009 (1 HSPs)
scaffold0009 (83-160)||(176558-176635)
[»] scaffold0259 (1 HSPs)
scaffold0259 (83-171)||(1847-1934)
[»] scaffold0028 (1 HSPs)
scaffold0028 (83-171)||(148552-148639)
[»] scaffold0066 (1 HSPs)
scaffold0066 (39-122)||(20858-20942)
[»] scaffold0466 (1 HSPs)
scaffold0466 (17-97)||(6750-6830)
[»] scaffold0002 (1 HSPs)
scaffold0002 (84-121)||(434218-434255)


Alignment Details
Target: scaffold0188 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 17468 - 17705
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17468 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 17567  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||  ||||||||||||||||||||||||||||||||||||| | ||| ||||||| |||||| |||| ||||||||||||||| |||||| |||||||    
T  17568 gacatgattttcaaacttgctcgttaagtatccttgataaggattggtcgtaccttgtgacgtacgttccaatcgtgacacgattttatcagtggaaggc 17667  T
Q  211 tagtatttatgtgttcttgtgcagttttttgaaggagag 249  Q
    ||||||||| ||||||||||||||  |||||||||||||    
T  17668 tagtatttaagtgttcttgtgcag-attttgaaggagag 17705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 19360949 - 19361177
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19360949 cagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 19361048  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| ||||||||||||||||||||||| |||  |||||||||  ||| ||||||| |||||| || | ||||||||||||||| |||||| ||||| |    
T  19361049 gacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaagac 19361148  T
Q  211 tagtatttatgtgttcttgtgcagttttt 239  Q
    ||||||||| |||||||||||||| ||||    
T  19361149 tagtatttaagtgttcttgtgcagatttt 19361177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 51765027 - 51765255
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  51765027 cagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgt 51765126  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| |||| |||||||||||||||||| ||| ||||||||||| ||||||||||| |||||| || | ||||||||||||||| |||||| |||||||    
T  51765127 gacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaaggc 51765226  T
Q  211 tagtatttatgtgttcttgtgcagttttt 239  Q
    ||||||||| |||||||||||||| ||||    
T  51765227 tagtatttaagtgttcttgtgcagatttt 51765255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 19365805 - 19365987
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19365805 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 19365904  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||||||||||||||||||||| | |||  |||||||||  ||| ||| ||| |||||| || | |||||||||||||    
T  19365905 gacacgattttcaaacttgctcgttaattttccaggataaggacaggtcgtacattgtgacgtacgtaccaatcgtgacacga 19365987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 20622780 - 20622626
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||  |||||||||||||||    
T  20622780 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 20622681  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    | ||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  20622680 cgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttggg 20622626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 9986826 - 9987005
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || |||||| |||||| ||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  9986826 gaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagctggtctgcagtgtgccaaatcgtgacacgattttgggaaatcgtgaca 9986925  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    | |||| |||||||||||||||||| ||| | ||||||||| |||||||||||||||| |||  | ||||||||||||||    
T  9986926 cgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacggatgcaccaatcgtgacacgat 9987005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 40281999 - 40282179
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||  ||| |||||||||||    
T  40281999 gaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtggtaaatcgtgaca 40282098  T
Q  115 caatt-ttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    | ||| | |||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||  | ||||||||||||||    
T  40282099 cgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgcaccaatcgtgacacgat 40282179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 21053580 - 21053760
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| ||| ||| ||||||| |  |||| |||||||||||||||||||||  |||||||||||||||    
T  21053580 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagctagaatgcaaggtgccaaatcgtgacacgattgtgggaaatcgtgaca 21053679  T
Q  115 caatt-ttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    | ||| | |||||||||||||||||| ||| ||||||||||| ||||||||||| |||| |||  | ||||||||||||||    
T  21053680 cgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgagacggatgcaccaatcgtgacacgat 21053760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 24202288 - 24202450
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||                   
T  24202288 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacg--------------- 24202372  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
          ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  24202373 ------attttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgttcaaatcgtgacacgat 24202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 24793709 - 24793841
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||| |||   ||||||||||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 24793808  T
Q  137 agtatccttgataaggactagtcataccttggg 169  Q
    ||||||||||||||||||| |||| ||||||||    
T  24793809 agtatccttgataaggactggtcaaaccttggg 24793841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 24786907 - 24787019
Alignment:
Q  57 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggacta 156  Q
    ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||     
T  24786907 tgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 24787006  T
Q  157 gtcataccttggg 169  Q
    |||| ||||||||    
T  24787007 gtcaaaccttggg 24787019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 13604132 - 13604260
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | | ||| |||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||| | ||||||    
T  13604132 cagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgt 13604231  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
    ||||  ||||||||||||||| |||||||    
T  13604232 gacatgattttcaaacttgctggttaagt 13604260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 41391149 - 41391001
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||| ||||||||||||||| | ||||||||||||  |||||||||  ||||||||||| |||||||||||||||||||    
T  41391149 cagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 41391051  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||  |||   |||||||||| |||||||||  ||||||||||| ||||    
T  41391050 gacatgattcagaaacttgctcattaagtatcactgataaggactggtca 41391001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 41398778 - 41398656
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||| | ||||||||||||  |||||||||  ||||||||||| |||||||||||||||||||||||| |||   |||||||||| |||    
T  41398778 atcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 41398680  T
Q  137 agtatccttgataaggactagtca 160  Q
    |||||| |||||||||||| ||||    
T  41398679 agtatcattgataaggactggtca 41398656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 9036043 - 9036183
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || | ||||| ||||||||||||||| | | ||||||||||| | ||||||||||| || ||||| ||| || |||  |||||||||||    
T  9036043 gaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgtcactattttgttaaatcgtgaca 9036142  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    | ||  | |||||||||||||||||||||||||||||||||    
T  9036143 cgatcgtgaaacttgctcgttaagtatccttgataaggact 9036183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 26644410 - 26644528
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    ||||| ||||||||||| | |||| |||||| |||||||||||| ||| | |||||||||||||| |||| ||||||||| |||||| ||| |||| |||    
T  26644410 cagaggaatcgtgatacgattttgtcatcgtaacacgattttgtaatgtcatgagctggtttgcacggtgtcaaatcgtggcacgattttgtgaaaacgt 26644509  T
Q  111 gacacaattttcaaacttg 129  Q
    ||||| |||||||||||||    
T  26644510 gacacgattttcaaacttg 26644528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 39446046 - 39445897
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | ||||| ||||||||||||||| | ||||||||||||   |||||||||  ||||||||||| |||||||||||||||||     
T  39446046 cagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccaagtttgcaggacgccaaatcgtggcacgatcttgggaaatca 39445948  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||| ||    ||||||||||||||||||||  ||||||||||| ||||    
T  39445947 tgacacgatccagaaacttgctcgttaagtatcactgataaggactggtca 39445897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 44203258 - 44203437
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||  | | ||||||||||| || ||||||||   ||||||||| |||||| | || ||||||||||    
T  44203258 gaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgac 44203356  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  44203357 acgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 44203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 44023413 - 44023562
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || ||| |||||||| ||||||||||||||||||    
T  44023413 cagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcg 44023511  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  44023512 tgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 44023562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 24202455 - 24202508
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgca 233  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24202455 aaatcgtgacacgattgtatcagaggaaggctagtatttaagtgttcttgtgca 24202508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 25439461 - 25439584
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtt 135  Q
    ||||||||||||||| | ||||||||||||   ||||||||| ||| |||||||| |||||||||||||||||||||||| ||    ||||||||| |||    
T  25439461 atcgtgacacgattt-gagatgccgtgagccaagtttgcaggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggtt 25439559  T
Q  136 aagtatccttgataaggactagtca 160  Q
    |||||||  ||||||||||| ||||    
T  25439560 aagtatctctgataaggactggtca 25439584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 160
Target Start/End: Original strand, 1054608 - 1054699
Alignment:
Q  69 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  1054608 gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtca 1054699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 31658880 - 31658962
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    |||| ||||||||||  ||| || |||||| ||||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  31658880 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacaatttt 31658962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 20762310 - 20762395
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||||||| ||||| | | |||||||||||||| ||||||||||||||||| |||||    
T  20762310 atcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttt 20762395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 25444654 - 25444777
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtt 135  Q
    ||||||||||||||| | ||||||||||||   ||||| ||| ||| |||||||| |||||||||||||||||||||||| ||    ||||||| | |||    
T  25444654 atcgtgacacgattt-gagatgccgtgagccaagtttgtaggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggtt 25444752  T
Q  136 aagtatccttgataaggactagtca 160  Q
    |||||||  ||||||||||| ||||    
T  25444753 aagtatctctgataaggactggtca 25444777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 19358530 - 19358588
Alignment:
Q  181 aatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    ||||||||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||    
T  19358530 aatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagatttt 19358588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 43988057 - 43988134
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| ||||||||||| |||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  43988057 aaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 43988134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 28220722 - 28220670
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||| ||||||    
T  28220722 tttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttc 28220670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 28223917 - 28223865
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||| ||||||    
T  28223917 tttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattttc 28223865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 3156540 - 3156576
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaa 106  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3156540 tttgcagggtgccaaatcgtgacacgattttgggaaa 3156576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 11348143 - 11348226
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||| || |||||| ||||||||||| | |||||||||||||| ||||  || |||||||| ||||||    
T  11348143 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgtctaatcgtgacacgattttggagaaacgtgacacgattttc 11348226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 49918015 - 49918073
Alignment:
Q  63 gagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    |||||| ||||||||||||| |||||||||||||| || | ||| |||||||| |||||    
T  49918015 gagctgttttgcagggtgcccaatcgtgacacgattttcgaaaaacgtgacacgatttt 49918073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 37070282 - 37070237
Alignment:
Q  84 aatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||||| |||||| |||||||| |||||||| |||||||||||||    
T  37070282 aatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 37070237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 37879635 - 37879551
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttca 123  Q
    |||| ||||||||||  ||| || ||| || ||||||||||||  |||||||||||||| |||| |||  ||||||| |||||||    
T  37879635 cgtgtcacgattttgcaatgtcgagagttgttttgcagggtgctcaatcgtgacacgattttggaaaaatgtgacacgattttca 37879551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 21646606 - 21646423
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21646606 cagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgt 21646507  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| ||||||    
T  21646506 gacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacgtacgttcaaatcgtgccacgat 21646423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 48408435 - 48408663
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48408435 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgagaaatcgt 48408534  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| |||| |||||||||||||||||| ||   |||||||||| ||| |||||||  ||||| || | ||||||||||||||| |||||| ||||| |    
T  48408535 gacacgatttgcaaacttgctcgttaagtttctaggataaggactggtcgtaccttgtaacgtacgtaccaatcgtgacacgattttatcagtggaagac 48408634  T
Q  211 tagtatttatgtgttcttgtgcagttttt 239  Q
    ||||||||| |||||||||||||| ||||    
T  48408635 tagtatttaagtgttcttgtgcagatttt 48408663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 234
Target Start/End: Complemental strand, 43504680 - 43504461
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43504680 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgaca 43504581  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagt 214  Q
    | |||| |||||||||||||||||| ||| ||||||||||| ||| |||||||||||  |||  | ||||||||||||||| |||||| ||| |||||||    
T  43504580 cgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacagatgcaccaatcgtgacacgattttatcagtggagggctagt 43504481  T
Q  215 atttatgtgttcttgtgcag 234  Q
    ||||| |||||| |||||||    
T  43504480 atttaagtgttcctgtgcag 43504461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 39730970 - 39731153
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  39730970 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgt 39731069  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| |||| |||||||||||||||||| ||| ||||||||||| ||| |||||||||||||| || | ||||||||||||||    
T  39731070 gacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgtaccaatcgtgacacgat 39731153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 25767506 - 25767327
Alignment:
Q  14 agaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25767506 agaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgac 25767407  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    || ||||||||||||||||||||||| ||   |||||||||  ||| | ||||| |||||| || | |||||||||||||    
T  25767406 acgattttcaaacttgctcgttaagtttctaggataaggacaggtcgtgccttgtgacgtacgtaccaatcgtgacacga 25767327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 18409362 - 18409180
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||| | || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  18409362 cagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtttgcagggtgccaaatcatgacacgatcttgagaaatcgt 18409263  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||| ||||||||||| ||||||| ||| ||||||||||| ||| ||||||| |||||| || | |||||||||||||    
T  18409262 gacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacgtacgtaccaatcgtgacacga 18409180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 18414238 - 18414056
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || |||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18414238 cagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggtttgcagggcgccaaatcgtgacacgatcttgggaaatcgt 18414139  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
     |||| ||| ||||||||||| ||||||| ||| ||||||||||| ||| ||||||| |||||| || | |||||||||||||    
T  18414138 aacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacgtacgtaccaatcgtgacacga 18414056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 169
Target Start/End: Original strand, 24789467 - 24789621
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  24789467 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtttgcagggtgccaaatcgtggcacgatcttgggaaatcgtgaca 24789566  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    | ||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24789567 cgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttggg 24789621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 1532947 - 1533100
Alignment:
Q  18 atcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaa 117  Q
    ||||||| || ||||||||||||||||| ||||||| | |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacga 1533046  T
Q  118 ttttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggac 171  Q
    || | |||||| |||||||||||||||||||||||||| || ||||||||||||    
T  1533047 ttgtgaaacttactcgttaagtatccttgataaggactggttataccttgggac 1533100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 21640387 - 21640152
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  21640387 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgt 21640288  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| |||   |||||||||| |||||||||  ||||||||||| ||||| |||||| ||| | |  ||||||||||||||||||  ||||| | || |    
T  21640287 gacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacggacg--caaatcgtgacacgattgcttcagaaggagac 21640190  T
Q  211 tagtattta-tgtgttcttgtgcagttttttgaaggagag 249  Q
    |||||| || |||||||||||||  | |||||||||||||    
T  21640189 tagtatatattgtgttcttgtgc--tattttgaaggagag 21640152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 2058568 - 2058388
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  2058568 cagagaaatcgtgacacgattttggcatcgtgacacgattt-gaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 2058470  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| |||   ||||||||||||||||||||||||||||||||| |||||||||||||  ||| |  ||||||||||||||||    
T  2058469 gacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacacgat 2058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 20357064 - 20357298
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  20357064 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 20357163  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||  |||   ||||||||||||||||||||||||||||||||  |||| |||||||| |  | |  ||||||||| ||||||||  |||||||||| |    
T  20357164 gacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaaaccttgggtcagacg--caaatcgtggcacgattgcttcagaggaagac 20357261  T
Q  211 tagtattta-tgtgttcttgtgcagttttttgaaggagag 249  Q
    |||||| || |||||||||||||   ||||||||||||||    
T  20357262 tagtatatattgtgttcttgtgc---tttttgaaggagag 20357298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 15 - 234
Target Start/End: Complemental strand, 32060848 - 32060631
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | || ||||||||||    
T  32060848 gaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgac 32060750  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctag 213  Q
    || ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  |||||||||||||||||| | ||||||||| ||||    
T  32060749 acgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattggaacagaggaagactag 32060652  T
Q  214 tatttatgtgttcttgtgcag 234  Q
    || ||| ||||||||||||||    
T  32060651 tacttaagtgttcttgtgcag 32060631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 2479923 - 2479795
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    ||||||||| |||| || | |||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||| ||| ||||||||    
T  2479923 cagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtttgcagggtgtcaaatcgtgtcacgattttgtgaaatcgt 2479824  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
     |||| ||||||||||||| | |||||||    
T  2479823 tacacgattttcaaacttgttggttaagt 2479795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 47264229 - 47264102
Alignment:
Q  12 agagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtg 111  Q
    ||||||||||||| || | |||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||||| ||| ||  || |||||||||    
T  47264229 agagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttgtagggtgtcaaatcgtggcacaattgtgtgaaatcgtg 47264130  T
Q  112 acacaattttcaaacttgctcgttaagt 139  Q
    |||| ||||||||||||||| |||||||    
T  47264129 acacgattttcaaacttgctggttaagt 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 12406821 - 12406664
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| ||||||| |  ||||||||||| |||||||||||||||||||    
T  12406821 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaagacgccaaatcgtggcacgatcttgggaaatcgt 12406722  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| ||| |||||||||    
T  12406721 gacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttggg 12406664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 4873685 - 4873541
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  ||||| || | |||||||||  ||||||||||| |||||||||||||||||||    
T  4873685 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagatagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 4873586  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    |||||||||   ||||||||||||||||||||  |||||||||||    
T  4873585 gacacaattcagaaacttgctcgttaagtatcactgataaggact 4873541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 234
Target Start/End: Original strand, 20343558 - 20343756
Alignment:
Q  33 tggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctc 132  Q
    ||||||||||||||||||| | | ||||||||||| | |||| || ||| |||||||| ||||||  |||||||||||||||| ||  | ||||||||||    
T  20343558 tggcatcgtgacacgatttcggggtgccgtgagctaggttgccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctc 20343657  T
Q  133 gttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgc 232  Q
    ||||||||||||||||||||||| ||| |  ||||||  ||| |  || ||||||||||||||  | ||||||||| |||||| | | ||||||||||||    
T  20343658 gttaagtatccttgataaggactggtcgtttcttgggtggtacg--cagatcgtgacacgatttcaacagaggaagactagta-taaagtgttcttgtgc 20343754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 6592881 - 6592702
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | || ||||||||||    
T  6592881 gaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgac 6592783  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  6592782 acgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 6592702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 6595097 - 6594918
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | || ||||||||||    
T  6595097 gaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgac 6594999  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  6594998 acgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 6594918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 18392724 - 18392561
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||| ||||||||||||||  | | ||||||||||| || ||||||||||| || |||||||||||| | || |||||||||||| ||  | |||||||    
T  18392724 tttggaatcgtgacacgattg-gaggtgccgtgagctagggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 18392626  T
Q  130 ctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    |||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  18392625 ctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 18392561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 24023855 - 24024004
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | | |||||||||| ||||||||   |  || | ||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  24023855 cagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 24023954  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| ||||    
T  24023955 gacacgattcagaaacttgctcgttaagtatcactgataaggactggtca 24024004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 18389246 - 18389125
Alignment:
Q  73 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacg 172  Q
    ||||||||| || |||||||||||| | || |||||||||||| ||  | ||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  18389246 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18389147  T
Q  173 tatgttcaaatcgtgacacgattg 196  Q
     | |  ||||||||||||||||||    
T  18389146 gacg--caaatcgtgacacgattg 18389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 1562479 - 1562368
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaa 182  Q
    |||||||| |||||| |||| |||||||||||| ||  | ||||||||||||||||||||||||||||||||| ||| | ||||| |||| | |  ||||    
T  1562479 aaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgtgacggacg--caaa 1562382  T
Q  183 tcgtgacacgattg 196  Q
    ||||||||||||||    
T  1562381 tcgtgacacgattg 1562368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 21811795 - 21811924
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    |||| |||||||||||||| | | ||||||||||||   ||||||||||||| |||||||| |||||||||||||||||||||||| ||    |||||||    
T  21811795 tttgccatcgtgacacgatct-gagatgccgtgagcaatgtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttg 21811893  T
Q  130 ctcgttaagtatccttgataaggactagtca 160  Q
    || ||||||||||  ||||||||||| ||||    
T  21811894 ctagttaagtatctctgataaggactggtca 21811924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 21646418 - 21646359
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  21646418 aaatcgtgacacgattttatcagaggaaggctagtatttaagtgttcttgtgcagatttt 21646359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 44847656 - 44847735
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtg 90  Q
    |||||||||||||| || | |||||||||||||||||||||||| ||| |||||||||||||||||| || || ||||||    
T  44847656 cagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttgcaggatgtcagatcgtg 44847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 21983830 - 21983712
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||   ||||||||||||||||||  ||| ||||||||||||||||||||| | ||||| | || ||| ||| |||| |||    
T  21983830 cagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttgcagggtgaccaatcgcggcatgattttgtgaaaacgt 21983731  T
Q  111 gacacaattttcaaacttg 129  Q
    ||||| |||||||||||||    
T  21983730 gacacgattttcaaacttg 21983712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 24260929 - 24261006
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||||||||||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  24260929 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 24261006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 1562364 - 1562310
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  1562364 aaatcgtgacacgattggaacagaggaagactagtatttatgtgttcttgtgcag 1562310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 31109165 - 31109251
Alignment:
Q  69 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||| |||   ||||||||| |||||||||   |||||||||||    
T  31109165 gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggact 31109251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 2361691 - 2361602
Alignment:
Q  32 ttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    |||| ||||||||||||||||   ||| || |||||| |||| ||| ||||||||||||||||||| ||||| || ||||||||||||||    
T  2361691 ttggaatcgtgacacgattttacaatgtcgagagctgttttgtaggatgccaaatcgtgacacgattttggggaaacgtgacacaatttt 2361602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 4178413 - 4178498
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||||||| ||||| | | |||||||||||||| ||||||||||||||||| |||||    
T  4178413 atcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttt 4178498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 21989469 - 21989377
Alignment:
Q  36 catcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| | | ||||||| |||||| ||| |||| |||||||| |||||| ||||||    
T  21989469 catcgtgacacgattttgcaatgtcgtgagctggtttgcagggcgaccaatcgtggcacgattttgtgaaa-cgtgacacgattttccaacttg 21989377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 24265785 - 24265862
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  24265785 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 24265862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 23554651 - 23554764
Alignment:
Q  9 agcagagaaatcgtgatacaaatttggcat-cgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaa 106  Q
    ||||||||||||||||||||| |||||||  |||| |||||||||| | ||| || |||||| ||| ||||||| | |||||||||||||| ||||||||    
T  23554651 agcagagaaatcgtgatacaa-tttggcaagcgtgtcacgattttggtaatgtcgagagctgtttt-cagggtgtccaatcgtgacacgattttgggaaa 23554748  T
Q  107 tcgtgacacaattttc 122  Q
     |||||||| ||||||    
T  23554749 acgtgacacgattttc 23554764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 39731177 - 39731236
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||  |||||||||||||||| |||||||||||||| ||||    
T  39731177 aaatcgtgacacgattttatcaatggaaggctagtatttaagtgttcttgtgcagatttt 39731236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 12397385 - 12397312
Alignment:
Q  95 gatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||||||||||||||||||| |||   ||||||||||||||||||||  ||||||||||| ||| |||||||||    
T  12397385 gatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttggg 12397312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 25767321 - 25767253
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagag 249  Q
    |||||||||||||||| |||||  ||||| |||||||||| ||||||||||||||  |||||||||||||    
T  25767321 aaatcgtgacacgattttatcaatggaagactagtatttaagtgttcttgtgcag-attttgaaggagag 25767253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 18409174 - 18409115
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| ||||| |||||||||| ||||||| |||||| ||||    
T  18409174 aaatcgtgacacgattttatcagtggaagactagtatttaagtgttctcgtgcagatttt 18409115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 6592698 - 6592644
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  6592698 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 6592644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 6594914 - 6594860
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  6594914 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 6594860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 18389121 - 18389067
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  18389121 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 18389067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 18392557 - 18392503
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  18392557 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 18392503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 16880552 - 16880475
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||| ||||||| |||   ||||||||| ||||||| ||  ||||||||||| ||||    
T  16880552 aaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca 16880475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 16885407 - 16885330
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||| ||||||| |||   ||||||||| ||||||| ||  ||||||||||| ||||    
T  16885407 aaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca 16885330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 4539046 - 4538994
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| |||||||| |||||||||||||| |||||||| |||||||| ||||||    
T  4539046 tttgaagggtgcctaatcgtgacacgattttgggaaaacgtgacacgattttc 4538994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 47674438 - 47674386
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||| | |||||||||||||| |||||||| |||||||| ||||||    
T  47674438 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttc 47674386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 47676631 - 47676579
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||| | |||||||||||||| |||||||| |||||||| ||||||    
T  47676631 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttc 47676579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 49092223 - 49092159
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||||||||  ||||||| |||||| ||||||||  ||||||| |||||| ||||||||    
T  49092223 tggtttgcagggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcgaacttgct 49092159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 2058383 - 2058328
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttgtgcag 234  Q
    |||||||| ||||||||  |||||||||||||||||| || |||||||||||||||    
T  2058383 aaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcag 2058328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 6360632 - 6360573
Alignment:
Q  63 gagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||||| ||||||||||||| ||| |||||||||| ||||| || |||||||| ||||||    
T  6360632 gagctgttttgcagggtgcccaattgtgacacgattttggggaaacgtgacacgattttc 6360573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 24789649 - 24789717
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtat-ttatgtgttcttgtgcagttttttgaaggagag 249  Q
    |||||||||||||||||  |||||||||||||||||| | | |||||||||||||  | ||||||||||||    
T  24789649 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca--tctttgaaggagag 24789717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 32358582 - 32358496
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttca 123  Q
    |||||||||||||||| | | || |||||| |||||| ||||||  | |||||||| ||||| |||||||| ||||||||||||||||    
T  32358582 atcgtgacacgattttct-aggcagtgagcatggttttcagggtatccaatcgtgatacgattttgggaaaacgtgacacaattttca 32358496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 48600022 - 48599939
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||| || |||||| ||||||||||||  ||||||||||||||  |||| || |||||||| ||||||    
T  48600022 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcacaatcgtgacacgattatggggaaacgtgacacgattttc 48599939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 4796238 - 4796292
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaa 124  Q
    ||||||||||||  |||||||||||||| |||| ||| |||||||| ||||||||    
T  4796238 tttgcagggtgctcaatcgtgacacgattttggaaaaacgtgacacgattttcaa 4796292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 1532921 - 1532958
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacga 48  Q
    |||||||||||||| || ||||||||||||||||||||    
T  1532921 cagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 2761802 - 2761749
Alignment:
Q  44 cacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    ||||||||||  ||| || |||||| ||||||||||||| ||||||||||||||    
T  2761802 cacgattttgcaatgtcgagagctgttttgcagggtgcccaatcgtgacacgat 2761749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 27347597 - 27347633
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaa 106  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  27347597 tttgcagggtgcccaatcgtgacacgattttgggaaa 27347633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 149; Significance: 8e-79; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 9271 - 9044
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  9271 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacatgat-ttgggaaatcgt 9173  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| |||| |||||||||||||||||| ||| ||||||||||| ||| |||||||||||||| |  | ||||||||||||||| |||||| |||||||    
T  9172 gacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcgtgacacgattttatcagtggaaggc 9073  T
Q  211 tagtatttatgtgttcttgtgcagttttt 239  Q
    ||||||||| |||||||||||||| ||||    
T  9072 tagtatttaagtgttcttgtgcagatttt 9044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 11716 - 11534
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11716 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat-ttgggaaatcgt 11618  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| |||| |||||||||||||||||| ||| ||||||||||| ||| |||||||||||||| |  | ||||||||||||||    
T  11617 gacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcgtgacacgat 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 11529 - 11470
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||    
T  11529 aaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagatttt 11470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 1261454 - 1261634
Alignment:
Q  14 agaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||| || || ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1261454 agaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 1261553  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  1261554 acgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacatacgttcaaatcgtgacacgat 1261634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 26288480 - 26288298
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26288480 cagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgt 26288381  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||| |||||| |||| ||| ||| |||||    
T  26288380 gacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgtacgttccaatagtgtcacga 26288298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 26301737 - 26301555
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26301737 cagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgt 26301638  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||| |||||| |||| ||| ||| |||||    
T  26301637 gacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgtacgttccaatagtgtcacga 26301555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 26313731 - 26313549
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26313731 cagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgt 26313632  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||| |||||| |||| ||| ||| |||||    
T  26313631 gacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgtacgttccaatagtgtcacga 26313549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 33037323 - 33037558
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  33037323 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgt 33037422  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| |||   |||||||||| |||||||||  ||||||||||| ||||| |||||| ||| | |  ||||||||||||||||||  ||||| | || |    
T  33037423 gacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacggacg--caaatcgtgacacgattgcttcagaaggagac 33037520  T
Q  211 tagtattta-tgtgttcttgtgcagttttttgaaggagag 249  Q
    |||||| || |||||||||||||  |||||||||||||||    
T  33037521 tagtatatattgtgttcttgtgc--ttttttgaaggagag 33037558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 4759570 - 4759751
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||| |||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  4759570 cagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 4759669  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||||| ||| | |  ||||||||||||||||    
T  4759670 gacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacg--caaatcgtgacacgat 4759751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 2627359 - 2627497
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  2627359 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggtttgcatggtgccaaatcgtgacacgattttgggaaatcgtgaca 2627458  T
Q  115 caattttcaaacttgctcgttaagtatccttgataagga 153  Q
    | |||| |||||||||||||||||| ||| |||||||||    
T  2627459 cgatttgcaaacttgctcgttaagtttccatgataagga 2627497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 18852663 - 18852821
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    ||||||||||||||||| | |||||||||||||||||||||   | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  18852663 cagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 18852762  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  18852763 gacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttggg 18852821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 30656246 - 30656088
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  30656246 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 30656147  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  30656146 gacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttggg 30656088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 36979978 - 36979797
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| ||||||||||| |||||||    
T  36979978 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgt 36979879  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| |||||||||||||  ||| |  ||||||||||||||||    
T  36979878 gacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgtacg--caaatcgtgacacgat 36979797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 18870057 - 18870215
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |||| |||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  18870057 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 18870156  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  | ||||||||| |||||||||||||    
T  18870157 gacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttggg 18870215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 3439124 - 3439267
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | | ||||||||||||||||||| | | ||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||    
T  3439124 cagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgacacgat-ttgggaaatcgt 3439222  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    ||||| ||  | |||||||||||||||||||||||||||||||||    
T  3439223 gacacgatcgtgaaacttgctcgttaagtatccttgataaggact 3439267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 10683775 - 10683924
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  10683775 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 10683874  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| ||||    
T  10683875 gacacgattcagaaacttgctcgttaagtatctctgataaggactggtca 10683924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 7412915 - 7412787
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||  || || ||| ||||||||    
T  7412915 cagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttgcagggtgtcaaatcgtggtacaattttgtgaaatcgt 7412816  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
    ||||| ||||||||||||||| |||||||    
T  7412815 gacacgattttcaaacttgctggttaagt 7412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 6311899 - 6311716
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||| ||| || | |||||||||||||||||||||   | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  6311899 cagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 6311800  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgt 197  Q
    ||||| |||   ||||||||||||||||||||  | ||||||||| |||| |||||||| |  |||  |||||||||||||||||||    
T  6311799 gacacgattcagaaacttgctcgttaagtatcactaataaggacttgtca-accttgggtcagatg--caaatcgtgacacgattgt 6311716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 15290183 - 15290401
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| || | |||||||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  15290183 gaaatcgtgacacgattttgggattgcgacacgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 15290281  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggcta 212  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||  | |||||||||| | |  |||||||||||||||||| | ||||||||| |||    
T  15290282 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggacggacg--caaatcgtgacacgattggaacagaggaagacta 15290379  T
Q  213 gtatttatgtgttcttgtgcag 234  Q
    ||| ||| ||||||||||||||    
T  15290380 gtacttaagtgttcttgtgcag 15290401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 15470552 - 15470770
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| || | |||||||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  15470552 gaaatcgtgacacgattttgggattgcgacacgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 15470650  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggcta 212  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||  | |||||||||| | |  |||||||||||||||||| | ||||||||| |||    
T  15470651 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggacggacg--caaatcgtgacacgattggaacagaggaagacta 15470748  T
Q  213 gtatttatgtgttcttgtgcag 234  Q
    ||| ||| ||||||||||||||    
T  15470749 gtacttaagtgttcttgtgcag 15470770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 31042946 - 31043031
Alignment:
Q  12 agagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    ||||||||||||| || ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  31042946 agagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggtttgcagggtgccaaatcgtgacacgat 31043031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 37 - 197
Target Start/End: Original strand, 10688661 - 10688818
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    |||||||||||||||   | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||| |||   ||||||||||||||    
T  10688661 atcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 10688760  T
Q  137 agtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgt 197  Q
    ||||||  | ||||||||| |||| |||||||| |  |||  |||||||||||||||||||    
T  10688761 agtatcactaataaggacttgtca-accttgggtcagatg--caaatcgtgacacgattgt 10688818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 168
Target Start/End: Original strand, 7289463 - 7289620
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgatttt--gtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatc 108  Q
    ||||||||| |||| || | |||||||||||||||||||||   | || ||| |||||| |||||||||  ||||||||||||||||||||||| |||||    
T  7289463 cagagaaatagtgacacgattttggcatcgtgacacgatttcaaggga-gccatgagctagtttgcaggacgccaaatcgtgacacgatcttggaaaatc 7289561  T
Q  109 gtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgg 168  Q
    ||||||| |||   ||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  7289562 gtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-taccttgg 7289620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 25689604 - 25689734
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| ||||||  ||||||||||| |||| ||  | ||||||||||||||    
T  25689604 atcgtgacacgatttcggg-tgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgtta 25689702  T
Q  137 agtatccttgataaggactagtcataccttgg 168  Q
    ||||||||||||||||||| ||| | ||||||    
T  25689703 agtatccttgataaggactggtcgttccttgg 25689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 25327700 - 25327857
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||| ||||| ||||||||   |  || ||||||| |||||||||  |||||||| || |||||||||||||||||||    
T  25327700 cagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagtttgcaggacgccaaatcatggcacgatcttgggaaatcgt 25327799  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| |||| ||||||||    
T  25327800 gacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttggg 25327857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 42575869 - 42575689
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||| |||||||||| | ||||||||||| | || ||||||||   ||||||||| |||||| |||||||| ||||||    
T  42575869 gaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgtcacgattttgggaaaatcgtga 42575771  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  42575770 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggacggacg--caaatcgtgacacgattg 42575689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 39784361 - 39784510
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || ||| |||||||| ||||||||||||||||||    
T  39784361 cagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcg 39784459  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||| |||   ||||||| | ||||||||||  ||||||||||| ||||    
T  39784460 tgacacgattcagaaacttgttggttaagtatcactgataaggactggtca 39784510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 26288292 - 26288233
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||    
T  26288292 aaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagatttt 26288233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 26301549 - 26301490
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||    
T  26301549 aaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagatttt 26301490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 26313543 - 26313484
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||||||| ||||    
T  26313543 aaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcagatttt 26313484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 1746775 - 1746663
Alignment:
Q  9 agcagagaaatcgtgatacaaatttggca-tcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaa 106  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||| | ||| || |||||| ||| ||||| | | |||||||||||||| ||||||||    
T  1746775 agcagagaaatcgtgacacaa-tttggcaatcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacgattttgggaaa 1746678  T
Q  107 tcgtgacacaatttt 121  Q
    ||||||||| |||||    
T  1746677 tcgtgacacgatttt 1746663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 25689764 - 25689817
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgca 233  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||||    
T  25689764 aaatcgtgacacgattgcaacagaggaaggctagtatttaagtgttcttgtgca 25689817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 35745870 - 35745793
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  35745870 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtca 35745793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 31043131 - 31043190
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||    
T  31043131 aaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagatttt 31043190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 43036062 - 43036148
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||||||| |  ||||||||||| || ||||||||||| | |||||||||||||| |||| ||| |||||||| ||||||    
T  43036062 atcgtgacacgatttcgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattttc 43036148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 19945869 - 19945784
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||||||| ||||| | | |||||||||||||| || |||||||||||||| |||||    
T  19945869 atcgtgacacgattttgataatgtcgagagctggttttcagggcgtccaatcgtgacacgattttaggaaatcgtgacacgatttt 19945784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 31217895 - 31217980
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||||||| ||||| | | ||| |||||||||| ||||||||||||||||| |||||    
T  31217895 atcgtgacacgattttggtaatgtcgagagctggttttcagggcgtccaattgtgacacgattttgggaaatcgtgacacgatttt 31217980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 42435736 - 42435652
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||||||||||| || ||||||||||| | |||||||||||||| ||||| || |||||||| ||||||    
T  42435736 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaacgtgacacgattttc 42435652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 36979792 - 36979741
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtg 231  Q
    |||||||| ||||||||  ||||||||||||||||||||| |||||||||||    
T  36979792 aaatcgtggcacgattgcttcagaggaaggctagtatttaagtgttcttgtg 36979741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 42575686 - 42575631
Alignment:
Q  179 caaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    |||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  42575686 caaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 42575631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 5702048 - 5702109
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    ||||||||||||  ||||||| |||||| |||| ||| |||||||| |||||||||||||||    
T  5702048 tttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgct 5702109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 22975950 - 22976042
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttca 123  Q
    |||| ||||||||||||||||| | | || ||| || |||||| ||||||| | |||||||||||||| |||||||| |||||||| |||||||    
T  22975950 tttgacatcgtgacacgatttttt-aggcagtgggcatggttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttca 22976042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 34257033 - 34256949
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||| ||| ||||| | | |||||||||||||| ||||||||||||||||| |||||    
T  34257033 atcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttt 34256949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 2627543 - 2627612
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagagtt 251  Q
    |||||||||||||||| ||||   ||| |||||||||||| ||||||||||||||   ||||||||||||||    
T  2627543 aaatcgtgacacgattttatcgttggagggctagtatttaagtgttcttgtgcag--atttgaaggagagtt 2627612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 15212459 - 15212511
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||| | |||||||||||||| |||||||| |||||||| ||||||    
T  15212459 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttc 15212511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 31043034 - 31043106
Alignment:
Q  121 tcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||||||||||||||||| |||  |||||||||  ||| ||||||| |||||| || | |||||||||||||    
T  31043034 tcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacga 31043106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 1261656 - 1261707
Alignment:
Q  197 tatcagaggaaggctagtattt-atgtgttcttgtgcagttttttgaaggagag 249  Q
    |||||||||||||||||||||| | ||||||||||||  |||||||||||||||    
T  1261656 tatcagaggaaggctagtatttaaagtgttcttgtgc--ttttttgaaggagag 1261707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 4733488 - 4733550
Alignment:
Q  60 cgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||| ||| |||||||   |||||||||||||| |||||||| |||||||| ||||||    
T  4733488 cgtgagctgttttccagggtgttcaatcgtgacacgattttgggaaaacgtgacacgattttc 4733550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 7289629 - 7289667
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtgacacaattt 120  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  7289629 caaatcgtgacacgatcttgggaaatcgtggcacgattt 7289667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 19175305 - 19175362
Alignment:
Q  74 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    ||||||||  ||||||| |||||| |||||||| |||||||  |||||||||||||||    
T  19175305 cagggtgctcaatcgtgtcacgattttgggaaaacgtgacatgattttcaaacttgct 19175362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 30143015 - 30143067
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||| | |||||||||||||| ||||||||  ||||||| ||||||    
T  30143015 tttgcagggtgtccaatcgtgacacgattttgggaaaatgtgacacgattttc 30143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 16407678 - 16407906
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  16407678 cagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgt 16407777  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| |||| |||||||||||||||||| ||| ||||||||||  ||| |||||||||||||| | || ||||||||||||||| |||||| ||| |||    
T  16407778 gacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtcgtaccttgggacgtacgctccaatcgtgacacgattttatcagtggagggc 16407877  T
Q  211 tagtatttatgtgttcttgtgcagttttt 239  Q
    ||||||||| || ||||||||||| ||||    
T  16407878 tagtatttaagtattcttgtgcagatttt 16407906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 24136444 - 24136266
Alignment:
Q  14 agaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    ||||||||||| || |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24136444 agaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 24136345  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  ||||||||||||||||    
T  24136344 acgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacg--caaatcgtgacacgat 24136266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 16409114 - 16409342
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||| | ||||||    
T  16409114 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtttgcaaggtgccaaattgtgacacgatcttgaggaatcgt 16409213  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| |||| |||||||||||||||||| ||| ||||||||||| ||| ||| |||||||||| | || ||||||||||||||| ||| || |||  ||    
T  16409214 gacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacattgggacgtacgctccaatcgtgacacgattttattagtggagagc 16409313  T
Q  211 tagtatttatgtgttcttgtgcagttttt 239  Q
    ||||||||| |||||||||||||| ||||    
T  16409314 tagtatttaagtgttcttgtgcagatttt 16409342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 15 - 233
Target Start/End: Original strand, 29720006 - 29720225
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||  |||||||||||||||    
T  29720006 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 29720105  T
Q  115 caatt-ttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctag 213  Q
    | ||| | |||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||  | ||||||||||||||| |||||| |||||||  |    
T  29720106 cgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgcaccaatcgtgacacgattttatcagtggaaggcatg 29720205  T
Q  214 tatttatgtgttcttgtgca 233  Q
    |||||| |||||||||||||    
T  29720206 tatttaagtgttcttgtgca 29720225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 26170398 - 26170576
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26170398 gaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgaca 26170497  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
     ||||| |||||||||||||||||| ||| ||||||||||| ||| |||||||||||| | |  | |||||||||||||    
T  26170498 taatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgcaccaatcgtgacacga 26170576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 26177507 - 26177685
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26177507 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcatgggaaatcgtgaca 26177606  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    | |||| |||||||||||||||||| ||| ||||||||||| ||| |||||||||||| | |  | |||||||||||||    
T  26177607 cgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgcaccaatcgtgacacga 26177685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 18442192 - 18442014
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18442192 gaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 18442093  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    | |||| |||||||||||||||||| ||| ||||||||||| ||| |  ||||||||| | |  | |||||||||||||    
T  18442092 cgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacgaacgcaccaatcgtgacacga 18442014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 9789768 - 9789628
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  9789768 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 9789669  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    | ||||  ||||||||||||||||| ||| |||||||||||    
T  9789668 cgatttgaaaacttgctcgttaagtttccatgataaggact 9789628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 38219949 - 38219809
Alignment:
Q  55 gatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggac 154  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||| ||||||||||    
T  38219949 gatgccgtgagctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggac 38219850  T
Q  155 tagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    | ||| ||||||| |||||| |||| |||||||||||||||    
T  38219849 tggtcgtaccttgtgacgtacgttccaatcgtgacacgatt 38219809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 27445530 - 27445373
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  27445530 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 27445431  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  27445430 gacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttggg 27445373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 27450373 - 27450216
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  27450373 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 27450274  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  27450273 gacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttggg 27450216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 30631912 - 30631763
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||  |||||||||  |||||||||||||||||| ||||||||||||    
T  30631912 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcaggacgccaaatcgtgacacgattttgggaaatcgt 30631813  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| ||||    
T  30631812 gacacgattcagaaacttgctcgttaagtatctctgataaggactggtca 30631763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 9352844 - 9352972
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    ||||||||||||||  | | | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||  || ||||||||    
T  9352844 cagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacgattctgtgaaatcgt 9352943  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
    ||||| ||||||||||||||| |||||||    
T  9352944 gacacgattttcaaacttgctggttaagt 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 29722193 - 29722332
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| ||| ||| ||||||| || |||| |||||||||||||||||||||  |||||||||||||||    
T  29722193 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagctagtctgcatggtgccaaatcgtgacacgattgtgggaaatcgtgaca 29722292  T
Q  115 caatt-ttcaaacttgctcgttaagtatccttgataagga 153  Q
    | ||| | |||||||||||||||||| ||| |||||||||    
T  29722293 cgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 15465088 - 15465002
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15465088 cagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 15465002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 35388169 - 35388079
Alignment:
Q  104 aaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgacacgat 35388079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 234
Target Start/End: Complemental strand, 22536812 - 22536596
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || | | ||||||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| ||| ||  |||||||||||||||    
T  22536812 gaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacaattgtgggaaatcgtgaca 22536713  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagt 214  Q
    | ||  | ||||||||||||||||||||||||||||||||| ||| |  ||||||  |||    || ||||||||||||||  | |||||||||||||||    
T  22536712 cgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta--cacagatcgtgacacgatttcaacagaggaaggctagt 22536615  T
Q  215 atttatgtgttcttgtgcag 234  Q
    | | | ||||||||||||||    
T  22536614 a-taaagtgttcttgtgcag 22536596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 1456674 - 1456831
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||| ||||  ||||||||||| |||||||||||||||||||    
T  1456674 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttacaggacgccaaatcgtggcacgatcttgggaaatcgt 1456773  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||| ||||||||||| ||||||||||| ||| |||||||||    
T  1456774 gacacgattcagaaacttgcttgttaagtatccctgataaggacttgtc-taccttggg 1456831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 36931880 - 36931966
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36931880 cagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagctggtttgcagggtgccaaatcgtgacacgat 36931966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 15045243 - 15045095
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||| ||||||||||||||| | ||||||||||||  |||||||||  ||||||||||| |||||||||||||||||||    
T  15045243 cagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 15045145  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||| |||   |||||||||| |||||||||  ||||||||||| ||||    
T  15045144 gacacgattcagaaacttgctcattaagtatcactgataaggactggtca 15045095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 43599282 - 43599124
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatg-ccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | |||||| ||||||||||||||   |  | ||||||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  43599282 cagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcg 43599183  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    |||||| |||   ||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  43599182 tgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttggg 43599124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 43604774 - 43604616
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatg-ccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | |||||| ||||||||||||||   |  | ||||||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  43604774 cagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcg 43604675  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    |||||| |||   ||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  43604674 tgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttggg 43604616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 43610266 - 43610108
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatg-ccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | |||||| ||||||||||||||   |  | ||||||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  43610266 cagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcg 43610167  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    |||||| |||   ||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  43610166 tgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttggg 43610108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 16546272 - 16546435
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||| ||||||||||||||  | | ||||||||||| || ||||||||||| || |||||||||||| | || |||||||||||| ||  | |||||||    
T  16546272 tttggaatcgtgacacgattg-gaggtgccgtgagctagggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 16546370  T
Q  130 ctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    |||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  16546371 ctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 16546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 40379734 - 40379897
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||| ||||||||||||||  | | ||||||||||| || ||||||||||| || |||||||||||| | || |||||||||||| ||  | |||||||    
T  40379734 tttggaatcgtgacacgattg-gaggtgccgtgagctagggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 40379832  T
Q  130 ctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    |||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  40379833 ctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 40379897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 40381945 - 40382108
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||| ||||||||||||||  | | ||||||||||| || ||||||||||| || |||||||||||| | || |||||||||||| ||  | |||||||    
T  40381945 tttggaatcgtgacacgattg-gaggtgccgtgagctagggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 40382043  T
Q  130 ctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    |||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  40382044 ctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 40382108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 43592789 - 43592679
Alignment:
Q  58 gccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactag 157  Q
    |||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||| |||   ||||||||||||||||||||| ||||||||||| |    
T  43592789 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactgg 43592690  T
Q  158 tcataccttggg 169  Q
    || |||||||||    
T  43592689 tc-taccttggg 43592679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 29402586 - 29402728
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||| ||||||||   |  ||| |||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  29402586 cagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 29402685  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataagga 153  Q
    ||||| |||   ||||||||||||||||||||  |||||||||    
T  29402686 gacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 16544093 - 16544213
Alignment:
Q  74 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgt 173  Q
    |||||||| || |||||||||||| | || |||||||||||| ||  | ||||||||||||||||||||||||||||||||| ||| | ||||||||||     
T  16544093 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 16544192  T
Q  174 atgttcaaatcgtgacacgattg 196  Q
    | |  ||||||||||||||||||    
T  16544193 acg--caaatcgtgacacgattg 16544213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 29752349 - 29752267
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||||| || ||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||| ||||||    
T  29752349 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggttgcagggtgccaaatcgtggcacgat 29752267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 10592884 - 10593023
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || | ||||| ||||||||||||||  | | ||||||||| | | ||||||||||| |||||||| |||||| | || |||||||||||    
T  10592884 gaaatcgtgacacgattttggtatcgtgacacgattccggg-tgccgtgagataggttgcagggtgcaaaatcgtggcacgatttgggaaaatcgtgaca 10592982  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    | ||  | ||||||||||||||||||||| |||||||||||    
T  10592983 cgatcgtgaaacttgctcgttaagtatccgtgataaggact 10593023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 29751615 - 29751526
Alignment:
Q  104 aaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||||  ||| |  |||||||||||||||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacacgatt 29751526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 31180787 - 31180656
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    |||||||||||||||   | || |||||||| |||||||||  ||||||||||| |||||||||||||||||||||||| |||   | |||| |||||||    
T  31180787 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgtta 31180688  T
Q  137 agtatccttgataaggactagtcataccttggg 169  Q
    ||||||  ||||||||||| |||| ||||||||    
T  31180687 agtatcactgataaggactggtca-accttggg 31180656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 25077813 - 25077925
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaa 181  Q
    ||||||||| ||||||  |||||||||||||||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  |||    
T  25077813 caaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caa 25077910  T
Q  182 atcgtgacacgattg 196  Q
    |||||||||||||||    
T  25077911 atcgtgacacgattg 25077925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 25135782 - 25135894
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaa 181  Q
    ||||||||| ||||||  |||||||||||||||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  |||    
T  25135782 caaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caa 25135879  T
Q  182 atcgtgacacgattg 196  Q
    |||||||||||||||    
T  25135880 atcgtgacacgattg 25135894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 29751683 - 29751601
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||||| |  |||||||||||  |||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||    
T  29751683 gaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgat 29751601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 28807138 - 28807261
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtt 135  Q
    ||||||||||||| | | ||||||||||||   ||||||||||||| |||||||| |||||||||||||||||||||||| ||    ||||||| | |||    
T  28807138 atcgtgacacgatct-gagatgccgtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggtt 28807236  T
Q  136 aagtatccttgataaggactagtca 160  Q
    |||||||  ||||||||||| ||||    
T  28807237 aagtatctctgataaggactggtca 28807261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 2785854 - 2785777
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  2785854 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 2785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 33768663 - 33768586
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  33768663 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33768586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 33791795 - 33791718
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  33791795 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33791718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 9789584 - 9789515
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagagtt 251  Q
    |||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||   ||||||||||||||    
T  9789584 aaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag--atttgaaggagagtt 9789515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 18442008 - 18441939
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagagtt 251  Q
    |||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||   ||||||||||||||    
T  18442008 aaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag--atttgaaggagagtt 18441939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 11916537 - 11916599
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    |||||||||||||||  ||||||| |||||| |||||||| |||||||| |||||||||||||    
T  11916537 tggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 11916599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 26170584 - 26170641
Alignment:
Q  182 atcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||||||||||| ||||    
T  26170584 atcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcagatttt 26170641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 37556232 - 37556305
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    ||||||||| |||||||||||||||| ||||||| || |  ||||||||| ||||||||||  |||||||||||    
T  37556232 caaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggact 37556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 37561054 - 37561127
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    ||||||||| |||||||||||||||||||||||| ||    ||||||||| ||||||||||  |||||||||||    
T  37561054 caaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggact 37561127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 29722332 - 29722401
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagagtt 251  Q
    |||||||||||||||| |||||| |||||||  ||||||| ||||||||||||||   ||||||||||||||    
T  29722332 aaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcag--atttgaaggagagtt 29722401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 42426730 - 42426678
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||| | |||||||||||||| |||||||| |||||||||||||||    
T  42426730 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacaattttc 42426678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 26177691 - 26177750
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| ||| |||||||||||| ||||||||| |||| ||||    
T  26177691 aaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgcgcagatttt 26177750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 35388057 - 35388010
Alignment:
Q  197 tatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaag 244  Q
    ||||||||||||||||||||||| |||||||||||||| |||| ||||    
T  35388057 tatcagaggaaggctagtatttaagtgttcttgtgcagattttggaag 35388010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 25077929 - 25077983
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  25077929 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 25077983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 25135898 - 25135952
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  25135898 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 25135952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 35388199 - 35388166
Alignment:
Q  53 gtgatgccgtgagctggtttgcagggtgccaaat 86  Q
    ||||||||||||||||||||||||||||||||||    
T  35388199 gtgatgccgtgagctggtttgcagggtgccaaat 35388166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 28751103 - 28751027
Alignment:
Q  44 cacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattt 120  Q
    |||||||| || ||| || ||| || |||||||||||   |||||||||||||| |||||||| |||||||||||||    
T  28751103 cacgatttcgtaatgtcgagagttgttttgcagggtgttcaatcgtgacacgattttgggaaaacgtgacacaattt 28751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 43599095 - 43599043
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttgtg 231  Q
    |||||||||||||||||  |||||||||||||||||| || ||||||||||||    
T  43599095 aaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 43604587 - 43604535
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttgtg 231  Q
    |||||||||||||||||  |||||||||||||||||| || ||||||||||||    
T  43604587 aaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 43610079 - 43610027
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttgtg 231  Q
    |||||||||||||||||  |||||||||||||||||| || ||||||||||||    
T  43610079 aaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 15464934 - 15464875
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||| ||||||| ||||||  |||| |||||||||| |||||||||||||| ||||    
T  15464934 aaatcgtggcacgattttatcagtagaagactagtatttaagtgttcttgtgcagatttt 15464875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 24136261 - 24136202
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtat-ttatgtgttcttgtgcagtttt 238  Q
    |||||||| ||||||||||||||||||| |||||||| | | ||||||||||||| ||||    
T  24136261 aaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgcattttt 24136202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 36932046 - 36932105
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||| ||||||| ||||||  |||| || ||||||| |||||||||||||||||||    
T  36932046 aaatcgtggcacgattttatcagctgaagactggtatttaagtgttcttgtgcagttttt 36932105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 42428913 - 42428862
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||| | |||||||||||||| |||||||| |||||||| |||||    
T  42428913 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttt 42428862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 213014 - 213068
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    |||||||||||| | | |||||||||||||| |||||||| |||||||| |||||    
T  213014 tggtttgcagggcgtccaatcgtgacacgattttgggaaaacgtgacacgatttt 213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 10593066 - 10593120
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||  | ||||||||| ||||||| || ||||||||||||||    
T  10593066 aaatcgtgacacgatttcaacagaggaagactagtatgtaagtgttcttgtgcag 10593120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 19806069 - 19806127
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||| ||||||||||  ||| || |||||| ||||||||||||| ||||||||||||||    
T  19806069 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaatcgtgacacgat 19806127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 5057503 - 5057556
Alignment:
Q  69 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||| | |||||||||||||| |||| ||| |||||||||||||||    
T  5057503 gttttcagggtgtccaatcgtgacacgattttggtaaaacgtgacacaattttc 5057556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 27445344 - 27445291
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttgtgc 232  Q
    |||||||| ||||||||  |||||||||||||||||| || |||||||||||||    
T  27445344 aaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 27445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 27450187 - 27450134
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttgtgc 232  Q
    |||||||| ||||||||  |||||||||||||||||| || |||||||||||||    
T  27450187 aaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 27450134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 29751521 - 29751451
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtat-ttatgtgttcttgtgcagttttttgaaggagagtt 251  Q
    |||||||||||||||||  | |||||||||||||||| | | |||||||||||||  | ||||||||||||||    
T  29751521 aaatcgtgacacgattgctttagaggaaggctagtatataaagtgttcttgtgca--tctttgaaggagagtt 29751451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 31396598 - 31396675
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   | ||||| | ||||||| ||  ||||||||||| ||||    
T  31396598 aaatcgtgccacgatcttgggaaatcgtgacacgattcagacacttgttggttaagtttctctgataaggactggtca 31396675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 31401455 - 31401532
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||  |||   |||||||||  |||||| ||  ||||||||||| ||||    
T  31401455 aaatcgtgccacgatcttgggaaatcgtgacatgattcagaaacttgctgcttaagtttctctgataaggactggtca 31401532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 43592650 - 43592597
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttgtgc 232  Q
    |||||||||||||||||  || ||||||||||||||| || |||||||||||||    
T  43592650 aaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgc 43592597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 234
Target Start/End: Complemental strand, 2172067 - 2171844
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    ||||||||||| || |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2172067 cagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 2171968  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| ||| | ||||||||||||||||| |||  |||||||||  ||| ||||||| |||||| || | ||||||||||||||| |||||| |||||||    
T  2171967 gacacgattgtaaaacttgctcgttaagtttccaagataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaaggc 2171868  T
Q  211 tagtatttatgtgttcttgtgcag 234  Q
    ||||||||| ||||||||||||||    
T  2171867 tagtatttaagtgttcttgtgcag 2171844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 5674266 - 5674447
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5674266 cagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgt 5674365  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| |  ||||||||||||||||    
T  5674366 gacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacg--caaatcgtgacacgat 5674447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 22709608 - 22709426
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||| ||| || ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22709608 cagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 22709509  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||||||||||||||||||||||| ||| ||||||||||| ||| ||||||| ||||||  | |||||||||||||||    
T  22709508 gacacgattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgtacatacaaatcgtgacacga 22709426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 3073301 - 3073147
Alignment:
Q  16 aaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 115  Q
    ||||||||| || ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||  | ||||||||||||||    
T  3073301 aaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtctacagggtgccaaatcgtgacacgattgttggaaatcgtgacac 3073202  T
Q  116 aattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggga 170  Q
     |||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  3073201 gatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 3073147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 411726 - 411903
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || |||||||||| ||||||| |||| ||| ||||||||||| || ||||||||||||||||||||||||||  |||||||||||||||    
T  411726 gaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtctgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 411825  T
Q  115 caatt-ttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacac 191  Q
    | ||| | |||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||  | |||||||||||    
T  411826 cgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgcaccaatcgtgacac 411903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 37 - 230
Target Start/End: Complemental strand, 5266610 - 5266418
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||| |||   |||||||||| |||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 5266511  T
Q  137 agtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagtat-ttatgtgttcttgt 230  Q
    ||||||||||||||||||| |||||||||||  ||| | |  ||||||||||||||||||  |||||||||| ||||||| || |||||||||||    
T  5266510 agtatccttgataaggactggtcataccttgaaacggacg--caaatcgtgacacgattgcttcagaggaagactagtatattttgtgttcttgt 5266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 11857531 - 11857374
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  11857531 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 11857432  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| ||||  |||||||||||||||||| |  ||||||||||| |||| ||||||||    
T  11857431 gacacgatttagaaacttgctcgttaagtaacactgataaggacttgtca-accttggg 11857374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 234
Target Start/End: Complemental strand, 6097945 - 6097747
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||                     ||||||||    
T  6097945 gaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgctaaa---------------------tcgtgaca 6097867  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagt 214  Q
    | |||| |||||||||||||||||| ||| ||||||||||| ||| ||||| |||||||| |  | ||||||||||||||| |||||| ||||| |||||    
T  6097866 cgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgattttatcaggggaagactagt 6097767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 30125054 - 30125185
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| |||||| ||||||||||||    
T  30125054 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgattttgggaaatcgt 30125153  T
Q  111 gacacaattttcaaacttgctcgttaagtatc 142  Q
    ||||| |||   ||||||||||||||||||||    
T  30125154 gacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 16579061 - 16578921
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || | ||||| ||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| |||||| | || |||||||||||    
T  16579061 gaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgatttgggaaaatcgtgaca 16578962  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    | ||  | |||||||||||||||||||||||||||||||||    
T  16578961 cgatcgtgaaacttgctcgttaagtatccttgataaggact 16578921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 16616319 - 16616459
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || | ||||| ||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| |||||| | || |||||||||||    
T  16616319 gaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgatttgggaaaatcgtgaca 16616418  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    | ||  | |||||||||||||||||||||||||||||||||    
T  16616419 cgatcgtgaaacttgctcgttaagtatccttgataaggact 16616459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 14741962 - 14742119
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  | |||||||| |||||||||  ||||||||||| ||||||||||| |||||||    
T  14741962 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgt 14742061  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| |||| ||||||||    
T  14742062 gacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttggg 14742119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 22010225 - 22010382
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  ||||| || | |||||||||  ||||||||||| |||||||||||||||||||    
T  22010225 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagttagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 22010324  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| ||| |||||||||    
T  22010325 gacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttggg 22010382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 23896920 - 23896792
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||| ||||||||| || | |||||||||||||||||||||||| ||  |||||| |||||||||||||| |||||||||  ||||| ||| ||||||||    
T  23896920 cagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgt 23896821  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
    ||||| ||||| ||||||||| |||||||    
T  23896820 gacacgatttttaaacttgctggttaagt 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 27647508 - 27647724
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || | | ||||||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| ||||||  || ||||||||||||    
T  27647508 gaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgagaaatcgtgaca 27647607  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagt 214  Q
    | ||  | |||||||||||||||||||||||||||  |||| ||| |  ||||||  ||| |  || ||||||||||||||| |  |||||||| |||||    
T  27647608 cgatcgtgaaacttgctcgttaagtatccttgatattgactggtcgtttcttgggtggtacg--cagatcgtgacacgattgcaatagaggaagactagt 27647705  T
Q  215 atttatgtgttcttgtgcag 234  Q
    | | | ||||||||||||||    
T  27647706 a-taaagtgttcttgtgcag 27647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 34166706 - 34166886
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  34166706 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 34166804  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||||| |  ||||||||||||||||||    
T  34166805 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacg--caaatcgtgacacgattg 34166886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 5756989 - 5757116
Alignment:
Q  12 agagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtg 111  Q
    |||||||| |||| || | | |||||||||||||| ||||||| ||| |||||| |||||||||||||| |||||||||  ||||| ||| |||||||||    
T  5756989 agagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtg 5757088  T
Q  112 acacaattttcaaacttgctcgttaagt 139  Q
    |||| ||||||||||||||| |||||||    
T  5757089 acacgattttcaaacttgctggttaagt 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 25420837 - 25421016
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| |||| ||||| | ||||||||||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | || ||||||||||    
T  25420837 gaaatcgtgacacaattttgggaccgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgac 25420935  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||  | ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  |||||||||||| |||||    
T  25420936 acgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacatgattg 25421016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 13150889 - 13151069
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  13150889 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 13150987  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  13150988 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 13151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 26253626 - 26253712
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||| ||||||| | ||| |||||||||||||||||||||||||    
T  26253626 cagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagatagttagcagggtgccaaatcgtgacacgat 26253712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 14737128 - 14737259
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    |||||||||||||||   |  |||||||||| |||||||||  ||||||||||| ||||||||||| |||||||||||| |||   ||||||||||||||    
T  14737128 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 14737227  T
Q  137 agtatccttgataaggactagtcataccttggg 169  Q
    ||||||  ||||||||||| |||| ||||||||    
T  14737228 agtatcactgataaggacttgtca-accttggg 14737259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 16554510 - 16554634
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgc 130  Q
    ||||| ||||||||||||||| | | ||||||||||| | || |||||||| |||| ||| |||||| | || |||||||||||| ||  | ||||||||    
T  16554510 tttggtatcgtgacacgatttcggggtgccgtgagctaggttacagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgc 16554609  T
Q  131 tcgttaagtatccttgataaggact 155  Q
    |||||||||||||||||||||||||    
T  16554610 tcgttaagtatccttgataaggact 16554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 16631066 - 16631190
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgc 130  Q
    ||||| ||||||||||||||| | | ||||||||||| | || |||||||| |||| ||| |||||| | || |||||||||||| ||  | ||||||||    
T  16631066 tttggtatcgtgacacgatttcggggtgccgtgagctaggttacagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgc 16631165  T
Q  131 tcgttaagtatccttgataaggact 155  Q
    |||||||||||||||||||||||||    
T  16631166 tcgttaagtatccttgataaggact 16631190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 33342648 - 33342468
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatct-tgggaaatcgtga 112  Q
    |||||||||| || | ||||| |||| ||| |||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | |||||||||||||    
T  33342648 gaaatcgtgacacgattttgggatcgcgacgcgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttctgggaaatcgtga 33342550  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  33342549 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 33342468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 6136507 - 6136328
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| |||| |||||||||| | ||||||||||||| || ||||||||    |||||||| ||||||  ||||||||||||||    
T  6136507 gaaatcgtgacacgattttggaatcgagacacgatttcg-gatgccgtgagctagggttgcaggggtgaaaatcgtggcacgattgtgggaaatcgtgac 6136409  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||| ||||    
T  6136408 acgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggaag--caaatcgtgacacaattg 6136328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 16652759 - 16652877
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||| | | ||||||||||| | ||| ||||||| || |||||  ||||| | || |||||||||||||||  | ||||||||||||||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctaggttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgtta 16652858  T
Q  137 agtatccttgataaggact 155  Q
    |||||||||||||||||||    
T  16652859 agtatccttgataaggact 16652877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 34164484 - 34164664
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | | ||| |||||||| |||||| | ||||||||||| | || ||||||||   ||||||||| |||||| |||||||| ||||||    
T  34164484 gaaatcgtgacacgattctgggatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgtcacgattttgggaaaatcgtga 34164582  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  34164583 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 34164664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 28155133 - 28155256
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtt 135  Q
    ||||||||||||| | | ||||||||||||   ||||||||||||| |||||||| |||||||||||||||||||||||| ||    ||||||||| |||    
T  28155133 atcgtgacacgatct-gagatgccgtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggtt 28155231  T
Q  136 aagtatccttgataaggactagtca 160  Q
    |||||||  ||||||||||| ||||    
T  28155232 aagtatctctgataaggactggtca 28155256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 5343956 - 5343879
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||||||||||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  5343956 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 5343879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 16839222 - 16839135
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggac 171  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| |||| ||||||||||    
T  16839222 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttgggac 16839135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 5674452 - 5674507
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtattt-atgtgttcttgtgcag 234  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  5674452 aaatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgcag 5674507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 6026941 - 6027053
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaa 181  Q
    ||||||||| |||||| | || |||||||||||| ||    ||||||||||||||||||||||||||||||||  ||| | |||||||||| | |  |||    
T  6026941 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacg--caa 6027038  T
Q  182 atcgtgacacgattg 196  Q
    |||||||||||||||    
T  6027039 atcgtgacacgattg 6027053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 6439044 - 6438898
Alignment:
Q  14 agaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtga 112  Q
    ||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || |||  ||||||| |||||||||||||||||||||    
T  6439044 agaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgcataatcgtggcacgatcttgggaaatcgtga 6438946  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  6438945 cacgattcagaaacttgctagttaagtatcactgataaggactggtca 6438898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 25420999 - 25421110
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaa 181  Q
    |||||||||||| ||| | || |||||||||||| ||  | ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  |||    
T  25420999 caaatcgtgacatgat-tgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caa 25421095  T
Q  182 atcgtgacacgattg 196  Q
    ||||||||| |||||    
T  25421096 atcgtgacatgattg 25421110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 6005898 - 6005821
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  6005898 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 6005821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 33330041 - 33330118
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  33330041 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33330118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 33335538 - 33335615
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  33335538 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33335615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 3073118 - 3073064
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    |||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  3073118 aaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 3073064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 3809452 - 3809367
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||||||||||||||||  ||| || |||||| || | |||||||| |||||||||||||| ||||| || |||||||| ||||||    
T  3809452 atcgtgacacgattttgcaatgtcgagagctgtttcgaagggtgcccaatcgtgacacgattttggggaaacgtgacacgattttc 3809367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 31086037 - 31086101
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||||||||  ||||||| |||||| |||| ||| |||||||| |||||||||||||||    
T  31086037 tggtttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgct 31086101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 26253698 - 26253789
Alignment:
Q  104 aaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    |||||||||||| ||||||||||||||| ||||||| | |  |||||||||| ||| ||| ||| |||||| ||   |||||||||||||||    
T  26253698 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtactttgtgacgtacgtatcaatcgtgacacgatt 26253789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 33342465 - 33342410
Alignment:
Q  179 caaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    |||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  33342465 caaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 33342410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 411911 - 411965
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    |||||||||||||||| |||||| |||||||  ||||||| ||||||||||||||    
T  411911 aaatcgtgacacgattttatcagtggaaggcatgtatttaagtgttcttgtgcag 411965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 6027057 - 6027111
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  6027057 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 6027111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 25421114 - 25421168
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  25421114 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 25421168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 5017060 - 5017121
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaactt 128  Q
    |||||||||||||||  ||||||| |||||| ||| |||| |||||||| ||||||||||||    
T  5017060 tggtttgcagggtgctcaatcgtgtcacgattttgagaaaacgtgacacgattttcaaactt 5017121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 6136324 - 6136271
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||||||| || |||||||||||    
T  6136324 aaatcgtgacacgattggaacagaggaagactagtatttaagt-ttcttgtgcag 6136271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 10076729 - 10076811
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    |||| ||||||||||  ||| || |||||| ||||||||||||| |||| ||| ||||| |||||||| ||||| || |||||    
T  10076729 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaatcatgatacgattttgggaaaacgtgatacgatttt 10076811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 5407437 - 5407353
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||| ||| ||| ||| | |||||||||||||| |||| ||||||||||||| ||||    
T  5407437 atcgtgacacgattttggtaatgtcgagagctgtttt-cagagtgtccaatcgtgacacgattttggaaaatcgtgacacattttt 5407353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 5411762 - 5411678
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||| ||| ||| ||| | |||||||||||||| |||| ||||||||||||| ||||    
T  5411762 atcgtgacacgattttggtaatgtcgagagctgtttt-cagagtgtccaatcgtgacacgattttggaaaatcgtgacacattttt 5411678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 8e-73; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 25410229 - 25410047
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25410229 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 25410130  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||| |||||| || | |||||||||||||    
T  25410129 gacacgattttcaaacttgctcgttaagtatccttgataaggaatggtcgtaccttgtgacgtacgtaccaatcgtgacacga 25410047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 32289185 - 32289367
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  32289185 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcttgacacgatcttgaggaatcgt 32289284  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||||  ||||||||||||||||| ||| ||||||||||| ||| |||||||||||||| | || |||||||||||||    
T  32289285 gacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgctccaatcgtgacacga 32289367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 3492340 - 3492158
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3492340 cagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 3492241  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||| | ||||||||||||||||| |||  |||||||||  ||| ||||||| |||||| || | |||||||||||||    
T  3492240 gacacgattctgaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacga 3492158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 30832958 - 30833140
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| |  |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30832958 cagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 30833057  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||||||||||||||||||||||| |||  |||||||||  ||| ||||||| |||||| || | |||||||||||||    
T  30833058 gacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacga 30833140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 4484886 - 4484703
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||  | ||||||    
T  4484886 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttaaggaatcgt 4484787  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| |||| |||||||||||||||||| ||  ||||||||||| ||| |||||||||||||| || | ||||||||||||||    
T  4484786 gacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgggacgtacgtaccaatcgtgacacgat 4484703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 40739420 - 40739236
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||| ||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||    
T  40739420 cagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgtggaattgt 40739321  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    ||||||||||||||||||||||||||||| | |  |||||||||  ||| ||||||| |||||| ||   |||||||||||||||    
T  40739320 gacacaattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatt 40739236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 9295898 - 9296079
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   | ||||||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  9295898 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgt 9295997  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| |||   |||||||||| |||||||||||||||||||||| ||||||||||||| || | |  ||||||||||||||||    
T  9295998 gacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcggacg--caaatcgtgacacgat 9296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 6266315 - 6266453
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  6266315 gaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 6266414  T
Q  115 caattttcaaacttgctcgttaagtatccttgataagga 153  Q
    | |||| ||||||| |||||||||| ||| |||||||||    
T  6266415 cgatttgcaaacttactcgttaagtttccatgataagga 6266453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 11098423 - 11098604
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||| ||||||||||||   | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  11098423 cagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 11098522  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| ||||  ||||||||||||||||||||  ||||||||||| |||| ||||||||  ||| |  ||||||||||||||||    
T  11098523 gacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgtacg--caaatcgtgacacgat 11098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 14292089 - 14291908
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||| | | | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  14292089 cagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 14291990  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| |||   |||||||||||||||||| |  ||||||||||| |||||||||||||  ||| |  ||||||||||||||||    
T  14291989 gacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgtacg--caaatcgtgacacgat 14291908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 28258713 - 28258815
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| || ||| ||||||||||||| ||||||||||||||| ||||    
T  28258713 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggtta 28258812  T
Q  137 agt 139  Q
    |||    
T  28258813 agt 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 12647927 - 12647748
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| ||||||  ||||||||||||||    
T  12647927 gaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgac 12647829  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  12647828 acgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 12647748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 39811513 - 39811657
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |   |||| |||  |||||||||  ||||||||||| |||||||||||||||||||    
T  39811513 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 39811612  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    ||||| |||   ||||||||| ||||||||||  |||||||||||    
T  39811613 gacacgattcagaaacttgctggttaagtatcactgataaggact 39811657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 4484698 - 4484644
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||    
T  4484698 aaatcgtgacacgattttatcagtggaaggctagtatttaagtgttcttgtgcag 4484644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 33528189 - 33528253
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||||||||  ||||||| |||||| |||||||| |||||||| |||||||||||||||    
T  33528189 tggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 33528253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 6266499 - 6266567
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagagt 250  Q
    |||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||   |||||||||||||    
T  6266499 aaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag--atttgaaggagagt 6266567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 40739232 - 40739161
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagagtt 251  Q
    |||||||||||||||| ||||||  |||| || ||||||| ||||||||||||||||||||| || ||||||    
T  40739232 aaatcgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagttttttggagtagagtt 40739161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 34389380 - 34389318
Alignment:
Q  69 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||| ||||||| | |||||||||||||| |||||||| |||||||| |||||||||||||||    
T  34389380 gttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgct 34389318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 19344901 - 19344824
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||| || |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  19344901 aaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 19344824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 19349759 - 19349682
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||| | ||||||||||  ||||||||||| ||||    
T  19349759 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtca 19349682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 12647744 - 12647690
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  12647744 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 12647690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 2837339 - 2837286
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttca 123  Q
    ||||||||||| | |||||||||||||| |||||||| |||||||| |||||||    
T  2837339 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttca 2837286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 39483401 - 39483346
Alignment:
Q  74 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||||||  ||||||| |||||| |||||||| |||||||| |||||||||||||    
T  39483401 cagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 39483346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 8389732 - 8389777
Alignment:
Q  86 tcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    ||||| |||||| |||||||| |||||||| |||||||||||||||    
T  8389732 tcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 8389777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 10706825 - 10706882
Alignment:
Q  74 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    ||||||||  ||| ||| |||||| |||||||| |||||||| |||||||||||||||    
T  10706825 cagggtgctcaattgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 10706882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 29867551 - 29867604
Alignment:
Q  69 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||| | |||||||||||||| |||||||| |||||||| ||||||    
T  29867551 gttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttc 29867604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 39284585 - 39284622
Alignment:
Q  85 atcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  39284585 atcgtgacacgattttgggaaaacgtgacacaattttc 39284622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 44310507 - 44310547
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattt 51  Q
    |||||||||||||| || | |||||||||||||||||||||    
T  44310507 cagagaaatcgtgacacgattttggcatcgtgacacgattt 44310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 28468014 - 28468196
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28468014 cagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgt 28468113  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||||||||||||||||||||||| ||  ||||||||||| ||| ||||||| |||||| || |||||||||||||||    
T  28468114 gacacgattttcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgtgacgtacgtacaaatcgtgacacga 28468196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 13992842 - 13992659
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13992842 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggtttgcagggtgccaaatcgtgacacgattttgggaaatcgt 13992743  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| ||||||||||||||||||||||| | | ||||||||||| ||||||||||| |||||| ||   ||||||||||||||    
T  13992742 gacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgacgtacgtatcaatcgtgacacgat 13992659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 31495861 - 31495704
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31495861 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 31495762  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacg 172  Q
    | |||| |||||||||||||||||| ||| ||||||||||| ||| |  |||||||||    
T  31495761 cgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacg 31495704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 37 - 234
Target Start/End: Complemental strand, 29761196 - 29761000
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||| |||   ||||||||||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 29761097  T
Q  137 agtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttgtgcag 234  Q
    ||||||||||||||||||| |||||||||||| ||| | |  ||||||||| |||||||   |||||||||| ||||||| || |||||||||||||||    
T  29761096 agtatccttgataaggactggtcataccttggtacggacg--caaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcag 29761000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 24742541 - 24742387
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  24742541 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 24742442  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcatacct 165  Q
    ||||| |||   ||||||||||||||||||||||||||||||||| |||||||||    
T  24742441 gacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacct 24742387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 9223935 - 9224092
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  9223935 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 9224034  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| ||| |||||||||    
T  9224035 gacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttggg 9224092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 9228722 - 9228879
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  9228722 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctcgtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 9228821  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| ||| |||||||||    
T  9228822 gacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttggg 9228879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 56141547 - 56141728
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaa-tcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | ||||||||||||||||||||| | |  | |||||||| |||||||||  |||||| ||||| ||||||||||||||||||    
T  56141547 cagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagtttgcaggacgccaaaatcgtggcacgatcttgggaaatcg 56141646  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    |||||| |||   ||||||||||||||||||||| ||||||||||| ||| ||||||||| |  |||  ||||||||||||||||    
T  56141647 tgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagatg--caaatcgtgacacgat 56141728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 51521014 - 51520870
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  ||||||||||| ||||||||||||||||| |    
T  51521014 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcat 51520915  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    ||||| |||   ||||||||||||||||||||| |||||||||||    
T  51520914 gacacgattcagaaacttgctcgttaagtatccctgataaggact 51520870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 18712294 - 18712448
Alignment:
Q  14 agaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    ||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||    
T  18712294 agaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgac 18712393  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    || |||   ||||||||||||||||||||  ||||||||||| |||| ||||||||    
T  18712394 acgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttggg 18712448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 5733211 - 5733061
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtga-gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||| ||| || | ||||||||||||||||||||| ||| |||||||| ||  |||||||||  ||||||||||||||||||||||||||||||    
T  5733211 cagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgccaaatcgtgacacgatcttgggaaatcg 5733112  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  5733111 tgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 5733061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 7122307 - 7122486
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| ||||||  ||||||||||||||    
T  7122307 gaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgac 7122405  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  7122406 acgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 7122486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 31985164 - 31985250
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  31985164 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagttagcagggtgccaaatcgtgacacgat 31985250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 7124529 - 7124669
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| ||||||  ||||||||||||||    
T  7124529 gaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgac 7124627  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    || ||    |||||||||||||||||||||||||||||||||    
T  7124628 acgatccagaaacttgctcgttaagtatccttgataaggact 7124669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 5135689 - 5135869
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   ||||||||| |||||| |||||||| ||||||    
T  5135689 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgtcacgattttgggaaaatcgtga 5135787  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||  ||| | |||||||||| | |  ||||||||||||||||||    
T  5135788 cacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacg--caaatcgtgacacgattg 5135869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 5137915 - 5138095
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   ||||||||| |||||| |||||||| ||||||    
T  5137915 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgtcacgattttgggaaaatcgtga 5138013  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||  ||| | |||||||||| | |  ||||||||||||||||||    
T  5138014 cacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacg--caaatcgtgacacgattg 5138095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 45347356 - 45347502
Alignment:
Q  14 agaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtga 112  Q
    ||||||||||| || | ||||| ||||||||||||||  | ||||||||||||   |||||| || ||| |||||||| |||||||||||||||||||||    
T  45347356 agaaatcgtgacacgattttggaatcgtgacacgatta-gagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtga 45347454  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  45347455 cacgattcagaaacttgctggttaagtatcactgataaggactggtca 45347502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 8393022 - 8393162
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | || ||||||||||    
T  8393022 gaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgac 8393120  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    || ||    ||||||||||||||||||||| |||||||||||    
T  8393121 acgatccagaaacttgctcgttaagtatccgtgataaggact 8393162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 8395231 - 8395371
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||  |||||| | || ||||||||||    
T  8395231 gaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtagcacgatttgggaaaatcgtgac 8395329  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    |||||    ||||||||||||||||||||| |||||||||||    
T  8395330 acaatccagaaacttgctcgttaagtatccgtgataaggact 8395371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 45356861 - 45356983
Alignment:
Q  38 tcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    |||||||||||||| | ||||||||||||   |||||| || ||| |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||    
T  45356861 tcgtgacacgattt-gagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggtta 45356959  T
Q  137 agtatccttgataaggactagtca 160  Q
    ||||||  ||||||||||| ||||    
T  45356960 agtatcactgataaggactggtca 45356983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 18856273 - 18856124
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || ||| |||||||| || |||||||||||||||    
T  18856273 cagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgcaaaatcgtggcaagatcttgggaaatcg 18856175  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  18856174 tgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 18856124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 3814569 - 3814421
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |   |||| |||  ||||||| |  ||||||||||| |||||| ||||||||||||    
T  3814569 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgcaagacgccaaatcgtgtcacgat-ttgggaaatcgt 3814471  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  3814470 gacacgattcagaaacttgctggttaagtatcactgataaggactggtca 3814421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 5148264 - 5148148
Alignment:
Q  12 agagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtg 111  Q
    ||||||||||||| || | |||  || |||||||||||||||  ||| |||||||| |||||||||||| | ||||||| |||||| ||| |||| | ||    
T  5148264 agagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagtttgcagggtgaccaatcgtggcacgattttgtgaaaacttg 5148165  T
Q  112 acacaattttcaaactt 128  Q
    |||| ||||||||||||    
T  5148164 acacgattttcaaactt 5148148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 5143823 - 5143730
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgca-gggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    |||||||||||||||||  ||| |||||||||||||||| ||||| | ||||||| |||||| ||| ||||  ||||||| |||||||||||||    
T  5143823 atcgtgacacgattttgcaatgtcgtgagctggtttgcaggggtgaccaatcgtggcacgattttgtgaaaatgtgacacgattttcaaacttg 5143730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 46570270 - 46570187
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||| || |||||| | ||||||||||| |||||||||| ||| |||||||| |||||||||||||||    
T  46570270 cgtgtcacgattttgaaatgtcgagagctgttctgcagggtgcccaatcgtgacaagattttgggaaaacgtgacacaattttc 46570187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 3778080 - 3778014
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcg 133  Q
    |||||||||||||||  ||||||| |||||| |||||||| |||||||| ||||||||| |||||||    
T  3778080 tggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaatttgctcg 3778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 13992654 - 13992600
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    |||||||||||||||| |||||| ||||| |||||||||| ||||||||||||||    
T  13992654 aaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcag 13992600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 16628440 - 16628506
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||  ||||||| |||||| |||||||| |||||||| ||||||||||||||| ||||    
T  16628440 tttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgcttgtta 16628506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 8689078 - 8689126
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  8689078 aaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgct 8689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 31495677 - 31495608
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagagtt 251  Q
    |||||||||||||||| |||||| ||| ||||| |||||| ||||||||||||||   ||||||||||||||    
T  31495677 aaatcgtgacacgattttatcagtggagggctaatatttaagtgttcttgtgcag--atttgaaggagagtt 31495608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 2209144 - 2209227
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||| || |||||| ||||||| ||||| |||||||||||||| ||||| || |||||||| ||||||    
T  2209144 cgtgtcacgattttgcaatgtcgagagctgttttgcagagtgcccaatcgtgacacgattttggggaaacgtgacacgattttc 2209227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 26176150 - 26176067
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||| || |||||| ||||||||||||| || |||||||| || |||||||| |||||||| ||||||    
T  26176150 cgtgtcacgattttgcaatgtcgagagctgttttgcagggtgcccaaccgtgacacaattttgggaaaacgtgacacgattttc 26176067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 38152003 - 38152066
Alignment:
Q  68 ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    ||||||||||||||  ||||||| ||| |  |||||||| ||||||||||||||||||||||||    
T  38152003 ggtttgcagggtgctcaatcgtgtcacaaatttgggaaaacgtgacacaattttcaaacttgct 38152066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 54882492 - 54882547
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||||||||||||| | |||||||||||||| |||||||| |||||||| ||||||    
T  54882492 tggtttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttc 54882547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 5370605 - 5370520
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || ||| || ||| ||||| | | |||||||||||||| ||||||||||||||||| |||||    
T  5370605 atcgtgacacgattttggtaatgtcgagagatgtttttcagggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttt 5370520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 6655379 - 6655463
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||||||||||| || ||||||||||| | |||||||||||||| ||||| ||  ||||||| ||||||    
T  6655379 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacacgattttc 6655463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 5268772 - 5268827
Alignment:
Q  74 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||||||  ||||||| |||||| |||||||| |||||||| |||||||||||||    
T  5268772 cagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 5268827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 31985331 - 31985390
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||| ||||||| ||||||  |||| |||||||||| |||||||||||||| ||||    
T  31985331 aaatcgtggcacgattttatcagttgaagactagtatttaagtgttcttgtgcagatttt 31985390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 56141713 - 56141751
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtgacacaattt 120  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  56141713 caaatcgtgacacgatcttgggaaatcgtggcacgattt 56141751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 5429353 - 5429406
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttca 123  Q
    ||||||||||| | |||||||||||||| |||||||| ||||| || |||||||    
T  5429353 tttgcagggtgtctaatcgtgacacgattttgggaaaacgtgatacgattttca 5429406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 27417650 - 27417610
Alignment:
Q  84 aatcgtgacacgatcttgggaaatcgtgacacaattttcaa 124  Q
    |||||||||||||| |||||||| |||||||| ||||||||    
T  27417650 aatcgtgacacgattttgggaaaacgtgacacgattttcaa 27417610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 28468220 - 28468282
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggc---tagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| ||||| |   ||||||||| |||||||||||||| ||||    
T  28468220 aaatcgtgacacgattttatcagtggaagactagtagtatttaagtgttcttgtgcagatttt 28468282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 52095857 - 52095805
Alignment:
Q  69 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    |||| ||||||| | |||||||||||||| |||||||| |||||||| |||||    
T  52095857 gttttcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttt 52095805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 21976 - 22199
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    ||||||||||| || |  ||||||||||||||||||||||| | | ||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  21976 cagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgt 22075  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| ||| | ||||||||||||||||||||  ||||||||||  ||| ||||||| |||||| || | ||||||||||||||| |||||| |||||||    
T  22076 gacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaaggc 22175  T
Q  211 tagtatttatgtgttcttgtgcag 234  Q
    ||||||||| ||||||||||||||    
T  22176 tagtatttaagtgttcttgtgcag 22199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 10981 - 11065
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||||||||||| || ||||||||||| | |||||||||||||| ||||| ||  ||||||| ||||||    
T  10981 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggggaaatgtgacacgattttc 11065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 26928117 - 26928345
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  26928117 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgtggaatcgt 26928216  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggc 210  Q
    ||||| ||||||||||||||||||||||| | |  |||||||||  ||| ||||||| ||| || ||   ||||||||||||||| ||||||  |||| |    
T  26928217 gacacgattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgacttacgtatcaatcgtgacacgattttatcagttgaagac 26928316  T
Q  211 tagtatttatgtgttcttgtgcagttttt 239  Q
    | ||||||| |||||||||||||| ||||    
T  26928317 ttgtatttaagtgttcttgtgcagatttt 26928345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 23198493 - 23198309
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | | ||||||    
T  23198493 cagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatttggaggaatcgt 23198394  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    ||||| |||| |||||||||||||||||| |||  |||||||||| ||| ||||||| |||||| || | |||||||||||||||    
T  23198393 gacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgacgtacgtaccaatcgtgacacgatt 23198309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 1306567 - 1306385
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| |  ||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1306567 cagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 1306468  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacga 193  Q
    ||||| ||| ||||||||||||||||||| |||  |||||||||  ||| ||||||| |||||| || | |||||||||||||    
T  1306467 gacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacga 1306385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 23200692 - 23200508
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | | | ||||||    
T  23200692 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtttgcagggtgccaaatcgtgacacgatttggaggaatcgt 23200593  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    ||||| |||| |||||||||||||||||| |||  |||||||||| ||| ||||||| ||| || || | |||||||||||||||    
T  23200592 gacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgacttacgtaccaatcgtgacacgatt 23200508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 31 - 243
Target Start/End: Original strand, 2671121 - 2671332
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgc 130  Q
    ||||||||||||||| |||||   | ||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| ||||  ||||||||    
T  2671121 tttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgc 2671220  T
Q  131 tcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagtattta-tgtgttcttg 229  Q
    ||||||||||||||||||||||||| |||||||||||||  ||| |  |||||||||||||||||   |||||||||| ||||||| || ||||||||||    
T  2671221 tcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttg 2671318  T
Q  230 tgcagttttttgaa 243  Q
    ||||| ||| ||||    
T  2671319 tgcagatttgtgaa 2671332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 33386174 - 33386302
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  33386174 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattttgtggaatcgt 33386273  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
    ||||| ||||||||||||||| |||||||    
T  33386274 gacacgattttcaaacttgctggttaagt 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 800726 - 800864
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  800726 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcggggtgccaaatcgtgacacgattgtgggaaatcgtgaca 800825  T
Q  115 caattttcaaacttgctcgttaagtatccttgataagga 153  Q
    | |||| |||||||||||||||||| ||| |||||||||    
T  800826 cgatttgcaaacttgctcgttaagtttccatgataagga 800864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 8477966 - 8477785
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    ||||||||| |||| || | ||||||||||||||||||||| | | ||||||||||| |||||| || |||||||||||| |||||||||||||||||||    
T  8477966 cagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgctggatgccaaatcgtggcacgatcttgggaaatcgt 8477867  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    ||||| |||   ||||||||||||||||||||||||||||||||| |||||||||||||  ||| |  ||||||||||||||||    
T  8477866 gacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacacgat 8477785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 195
Target Start/End: Complemental strand, 32143884 - 32143726
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgtta 32143785  T
Q  137 agtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    ||| | |  |||||||||  ||| ||||||| |||||| ||   |||||||||||||||    
T  32143784 agttttcaagataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatt 32143726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 40372292 - 40372446
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  40372292 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 40372391  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcatacct 165  Q
    ||||| |||   ||||||||||||||||||||||||||||||||| |||||||||    
T  40372392 gacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacct 40372446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 27453547 - 27453416
Alignment:
Q  8 gagcagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaat 107  Q
    |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  || | |||    
T  27453547 gagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgtagggtgccaaatcgtgacatgattgtgtggaat 27453448  T
Q  108 cgtgacacaattttcaaacttgctcgttaagt 139  Q
    |||||||| ||||||||||||||| |||||||    
T  27453447 cgtgacacgattttcaaacttgctggttaagt 27453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 37726262 - 37726134
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||    
T  37726262 cagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgtcaaatcgtgacacgattttgtggaatcgt 37726163  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
    ||||| ||||||||||||| | |||||||    
T  37726162 gacacgattttcaaacttgttggttaagt 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 7167846 - 7167688
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||| ||||   | ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  7167846 cagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 7167747  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  7167746 gacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttggg 7167688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 27986001 - 27986103
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||| ||||||||||||||| ||||    
T  27986001 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggtta 27986100  T
Q  137 agt 139  Q
    |||    
T  27986101 agt 27986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 28503355 - 28503512
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||| ||  ||||||||||| |||||||||||||||||||    
T  28503355 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgctggacgccaaatcgtggcacgatcttgggaaatcgt 28503454  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    |||||||||   ||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  28503455 gacacaattcagaaacttgctcgttaagtatccctgataaggacttgtca-accttggg 28503512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 27352117 - 27352299
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||| ||||||||| || | |||||||||||||||||||||   | ||||||||||| ||||||||    |||||||||| |||||||||||||||||||    
T  27352117 cagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttgcagaacaccaaatcgtggcacgatcttgggaaatcgt 27352216  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    ||||| |||   ||||||||||||||| ||||  ||||||||||| |||||||||||||||| | |  |||||||||||||||||    
T  27352217 gacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacg--caaatcgtgacacgatt 27352299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 22172698 - 22172847
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | ||||||||||||||||||||| | | ||||||||||  |||||||||  ||||||||||| |||||||||||||||||||    
T  22172698 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgt 22172797  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    ||||| |||   |||||||||||||||| |||  ||||||||||| ||||    
T  22172798 gacacgattcagaaacttgctcgttaaggatctctgataaggactggtca 22172847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 6716125 - 6716265
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || | ||||| ||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| ||||||  |||||||||||||||    
T  6716125 gaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgaca 6716224  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    | ||  | |||||||||||||||||||||||||||||||||    
T  6716225 cgatcgtgaaacttgctcgttaagtatccttgataaggact 6716265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 8738605 - 8738716
Alignment:
Q  57 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggacta 156  Q
    ||||||||||| |||||||||  || |||||||| |||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||     
T  8738605 tgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 8738704  T
Q  157 gtcataccttgg 168  Q
    ||||||||||||    
T  8738705 gtcataccttgg 8738716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 9090843 - 9090954
Alignment:
Q  57 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggacta 156  Q
    ||||||||||| |||||||||  || |||||||| |||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||     
T  9090843 tgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 9090942  T
Q  157 gtcataccttgg 168  Q
    ||||||||||||    
T  9090943 gtcataccttgg 9090954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 18656993 - 18656843
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtga-gctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||| ||| || | ||||||||||||||||||||| ||| |||||||| ||  |||||||||  ||||||||||||||||||||||||||||||    
T  18656993 cagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgccaaatcgtgacacgatcttgggaaatcg 18656894  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  18656893 tgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 18656843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 28501188 - 28501345
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||||||||   |  |||||||||| |||||||||   |||||||||| ||||||||||| |||||||    
T  28501188 cagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacaccaaatcgtggcacgatcttggaaaatcgt 28501287  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  28501288 gacacgattcagaaacttgctcgttaagtatccctgataaggacttgtca-accttggg 28501345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 54634750 - 54634890
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 114  Q
    |||||||||| || | |||||||| |||||||||||| | | |||||||||||   ||||||||||| |||||||| ||||||  |||||||||||||||    
T  54634750 gaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaagttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgaca 54634849  T
Q  115 caattttcaaacttgctcgttaagtatccttgataaggact 155  Q
    | ||  | |||||||||||||||||||||||||||||||||    
T  54634850 cgatcgtgaaacttgctcgttaagtatccttgataaggact 54634890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 6718331 - 6718449
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| ||||||  |||||||||||||||| ||  | ||||||||||||||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgtta 6718430  T
Q  137 agtatccttgataaggact 155  Q
    |||||||||||||||||||    
T  6718431 agtatccttgataaggact 6718449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 7782671 - 7782589
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  7782671 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggtttgcagggtgccaaatcgtgacacgat 7782589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 10208834 - 10209036
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtgacacaattttcaaactt 128  Q
    ||||| |||||||| |||||| | ||||||||||| | || ||||||||   ||||||||| |||||| |||||||| ||||||||| ||    ||||||    
T  10208834 tttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaactt 10208932  T
Q  129 gctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttctt 228  Q
    ||||||||| ||||||||||||||||| ||| | |||||||||| | |  |||||||||||||||||| | ||||||||| |||||| ||| ||||||||    
T  10208933 gctcgttaaatatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattggaacagaggaagactagtacttaagtgttctt 10209030  T
Q  229 gtgcag 234  Q
    ||||||    
T  10209031 gtgcag 10209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 10058067 - 10058247
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  10058067 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 10058165  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||||| |  ||||||||||||||||||    
T  10058166 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacg--caaatcgtgacacgattg 10058247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 10060289 - 10060469
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  10060289 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 10060387  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||||| |  ||||||||||||||||||    
T  10060388 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacg--caaatcgtgacacgattg 10060469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 10062511 - 10062691
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  10062511 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 10062609  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||||| |  ||||||||||||||||||    
T  10062610 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacg--caaatcgtgacacgattg 10062691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 10064733 - 10064913
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  10064733 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 10064831  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||||| |  ||||||||||||||||||    
T  10064832 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacg--caaatcgtgacacgattg 10064913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 45282628 - 45282746
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| || |||||||||||| | || |||||||||||| ||  | ||||||||||||||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 45282727  T
Q  137 agtatccttgataaggact 155  Q
    |||||||||||||||||||    
T  45282728 agtatccttgataaggact 45282746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 37408076 - 37408200
Alignment:
Q  14 agaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    ||||||||||| || | | ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||| |||||| |  | ||||||||||    
T  37408076 agaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtttgcagggtgtcaaatcgtggcacgat-tgtgtaaatcgtgac 37408174  T
Q  114 acaattttcaaacttgctcgttaagt 139  Q
    || ||||||||||||| | |||||||    
T  37408175 acgattttcaaacttgttggttaagt 37408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 4599067 - 4598887
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatct-tgggaaatcgtga 112  Q
    |||||||||| || | ||||| |||| |||||||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | |||||||||||||    
T  4599067 gaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttctgggaaatcgtga 4598969  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  4598968 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 4598887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 4601288 - 4601108
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatct-tgggaaatcgtga 112  Q
    |||||||||| || | ||||| |||| |||||||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | |||||||||||||    
T  4601288 gaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttctgggaaatcgtga 4601190  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  4601189 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 4601108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 10055845 - 10056025
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  10055845 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 10055943  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  10055944 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 10056025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 10066955 - 10067135
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   |||||||||||||||| |||||||| ||||||    
T  10066955 gaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggtgcaaatcgtgacacgattttgggaaaatcgtga 10067053  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  10067054 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 10067135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 3617074 - 3617253
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| |||||| | || ||||||||||    
T  3617074 gaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtgtcacgatttgggaaaatcgtgac 3617172  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||  | |||||||||||||||||||||||||||| | || ||| | |||||||||| | |  ||||||||||||||||||    
T  3617173 acgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacggacg--caaatcgtgacacgattg 3617253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 25637053 - 25637232
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | | ||||||||||||||||||| | | ||| | ||||| || ||||||||   ||||||||| ||||||  ||||||||||||||    
T  25637053 gaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtgc-gagagctagggttgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgac 25637151  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||  | ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  25637152 acgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 25637232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 27974477 - 27974577
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||  ||  ||||| |||||  ||||||||||||||| ||||    
T  27974477 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacgattgtgttaaatcttgacatgattttcaaacttgctggtta 27974576  T
Q  137 a 137  Q
    |    
T  27974577 a 27974577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 10211018 - 10211198
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtga 112  Q
    |||||||||| || | ||||| |||||||| |||||| | ||||||||||| | || ||||||||   ||||||||| |||||| |||||||| || |||    
T  10211018 gaaatcgtgacacgattttggtatcgtgacgcgatttag-gatgccgtgagttagggttgcaggggtgcaaatcgtggcacgattttgggaaaatcatga 10211116  T
Q  113 cacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    ||| ||    ||||||||||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  10211117 cacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 10211198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 7782603 - 7782513
Alignment:
Q  104 aaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgat 194  Q
    |||||||||||| |||| |||||||||||||||||| ||| ||||||||||| ||| | |||||||||| | || | ||||||||||||||    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttgggacgaacgtaccaatcgtgacacgat 7782513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 32475963 - 32475885
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcat 161  Q
    ||||||||||||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| |||||    
T  32475963 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat 32475885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 32480821 - 32480743
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcat 161  Q
    ||||||||||||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| |||||    
T  32480821 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat 32480743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 1306360 - 1306301
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  1306360 aaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagttttt 1306301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 2672527 - 2672604
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  2672527 aaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 2672604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 8512719 - 8512642
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  8512719 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 8512642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 8517599 - 8517522
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  8517599 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 8517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 21711733 - 21711669
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||| ||||||||  ||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  21711733 tggttttcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacaattttcaaacttgct 21711669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 40735097 - 40735161
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||||||||  ||||||| |||||| |||||||| |||||||| |||||||||||||||    
T  40735097 tggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 40735161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 8477780 - 8477729
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtg 231  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  8477780 aaatcgtgacacgattgcttcagaggaaggctagtatttaagtgttcttgtg 8477729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 23198305 - 23198246
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||    
T  23198305 aaatcgtgacacgattttatcagtggaagactagtatttaagtgttcttgtgcagatttt 23198246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 7782508 - 7782454
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    |||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||    
T  7782508 aaatcgtgacacgattttatcagtggagggctagtatttaagtgttcttgtgcag 7782454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 40734166 - 40734228
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    |||||||||||||||  ||||||| |||||| |||||||| |||||||| |||||||||||||    
T  40734166 tggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 40734228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 2676683 - 2676760
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| |||||| |||  ||||||||||| ||||    
T  2676683 aaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtca 2676760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 5258674 - 5258589
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||||||| || || | | |||||||||||||| ||||||||||||||||| |||||    
T  5258674 atcgtgacacgattttggtaatgtcgagagctggttttcaaggcgtccaatcgtgacacgattttgggaaatcgtgacacgatttt 5258589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 24968596 - 24968519
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||| ||  ||||||||||| ||||    
T  24968596 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca 24968519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 8370044 - 8370108
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||||||||  ||||||| |||||| |||||||| |||||||| ||||||||| |||||    
T  8370044 tggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaaattgct 8370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 16264880 - 16264820
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaact 127  Q
    |||||||||||||||  ||||||| |||||| |||||||| |||||||| |||||||||||    
T  16264880 tggtttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaact 16264820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 27027238 - 27027174
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||| ||||  ||||||| |||||| |||||||| |||||||| |||||||||||||||    
T  27027238 tggtttgcagagtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 27027174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 30709350 - 30709414
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    ||||||||||||||   ||||||| |||||| ||| |||| ||||||||||||||||||||||||    
T  30709350 tggtttgcagggtgttcaatcgtgtcacgattttgagaaaacgtgacacaattttcaaacttgct 30709414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 36029625 - 36029561
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||||||||  ||||||| |||||| |||| ||| |||||||| |||||||||||||||    
T  36029625 tggtttgcagggtgcttaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgct 36029561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 49200196 - 49200112
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||||||||||| || ||||||||||| | |||||||||||||| ||||| || |||||||| ||||||    
T  49200196 cgtgtcacgattttgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgatgttggggaaacgtgacacgattttc 49200112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 4598883 - 4598829
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  4598883 aaatcgtgacacgattgaaacagaggaagactagtacttaagtgttcttgtgcag 4598829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 4601104 - 4601050
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  4601104 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 4601050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 10211202 - 10211256
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  10211202 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 10211256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 47923457 - 47923521
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||||||||  ||||||| |||  | |||||||| |||||||| |||||||||||||||    
T  47923457 tggtttgcagggtgctcaatcgtgtcacatttttgggaaaacgtgacacgattttcaaacttgct 47923521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 51398499 - 51398551
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    ||||||||||| | ||| |||||||||| |||||||| |||||||||||||||    
T  51398499 tttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacaattttc 51398551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 6096316 - 6096261
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||||||||||||| | ||| |||||||||| |||||||| |||||||| ||||||    
T  6096316 tggtttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacgattttc 6096261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 23200504 - 23200445
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| |||||| ||||| || ||||||| ||||| |||||||| ||||    
T  23200504 aaatcgtgacacgattttatcagtggaagactggtatttaagtgtttttgtgcagatttt 23200445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 27453357 - 27453298
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||| ||||||| ||||||  |||| ||||| |||| |||||||||||||||||||    
T  27453357 aaatcgtggcacgattttatcagttgaagactagtttttaagtgttcttgtgcagttttt 27453298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 29812736 - 29812787
Alignment:
Q  70 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||| | |||||||||||||| |||||||| |||||||| |||||    
T  29812736 tttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgatttt 29812787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 32143722 - 32143663
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttt 239  Q
    |||||||||||||||| ||||||  |||| || ||||||| |||||||||||||| ||||    
T  32143722 aaatcgtgacacgattttatcagttgaagacttgtatttaagtgttcttgtgcagatttt 32143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 800910 - 800977
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcagttttttgaaggagag 249  Q
    |||||||||||||||| ||||||  || ||||| |||||| |||||||||||||  | ||||||||||||    
T  800910 aaatcgtgacacgattttatcagtagagggctaatatttaagtgttcttgtgca--tatttgaaggagag 800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 3393217 - 3393330
Alignment:
Q  9 agcagagaaatcgtgatacaaatttggca-tcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaa 106  Q
    |||||||||||||| | || | ||||||| ||| |||||||||||| | ||| || ||||||||||  || | | | |||||||||||||| ||||||||    
T  3393217 agcagagaaatcgtaacacga-tttggcaatcgcgacacgattttggtaatgtcgagagctggtttttagtgcgtccaatcgtgacacgattttgggaaa 3393315  T
Q  107 tcgtgacacaatttt 121  Q
    ||||||||| |||||    
T  3393316 tcgtgacacgatttt 3393330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 27038573 - 27038511
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    |||||||||||||||  |||| || |||||| ||||||||  ||||||| |||||||||||||    
T  27038573 tggtttgcagggtgctcaatcatgtcacgattttgggaaaatgtgacacgattttcaaacttg 27038511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 35926022 - 35925960
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    |||||||||||||||  ||||||| |||||  ||| |||| |||||||| |||||||||||||    
T  35926022 tggtttgcagggtgctcaatcgtgtcacgagtttgagaaaacgtgacacgattttcaaacttg 35925960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 36018331 - 36018369
Alignment:
Q  84 aatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  36018331 aatcgtgacacgattttgggaaaacgtgacacaattttc 36018369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 54634933 - 54634986
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | |||||||||||||||| | | ||||||||||||||    
T  54634933 aaatcgtgacacgattgcaacagaggaaggctagta-taaagtgttcttgtgcag 54634986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 28503520 - 28503549
Alignment:
Q  82 caaatcgtgacacgatcttgggaaatcgtg 111  Q
    ||||||||||||||||||||||||||||||    
T  28503520 caaatcgtgacacgatcttgggaaatcgtg 28503549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 39032117 - 39032174
Alignment:
Q  74 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    ||||||||  ||||||| |||||| ||||||||  ||||||| |||||||||||||||    
T  39032117 cagggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcaaacttgct 39032174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 45094803 - 45094887
Alignment:
Q  37 atcgtgacacgattttg-tgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    ||||||||||||||||| | ||| || |||||| ||| ||||| | | ||||||||||| || ||||||||||||||||| |||||    
T  45094803 atcgtgacacgattttggtaatgtcgagagctgtttt-cagggcgtccaatcgtgacacaattttgggaaatcgtgacacgatttt 45094887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 46173186 - 46173234
Alignment:
Q  67 tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacac 115  Q
    |||||||||||||| | |||||||||||||| |||||||| | ||||||    
T  46173186 tggtttgcagggtgtccaatcgtgacacgattttgggaaaacatgacac 46173234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 517 - 703
Alignment:
Q  9 agcagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatc 108  Q
    |||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||    
T  517 agcagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatc 616  T
Q  109 gtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgatt 195  Q
    ||||||| ||||||||| ||||||||||||| |||  |||| ||||| ||| ||||||| |||||| || | ||| |||||||||||    
T  617 gtgacacgattttcaaatttgctcgttaagtttccaggatagggactggtcgtaccttgtgacgtacgtaccaattgtgacacgatt 703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 7948 - 8034
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7948 cagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggtttgcagggtgccaaatcgtgacacgat 8034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 3374 - 3522
Alignment:
Q  12 agagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtg 111  Q
    ||||||||||||| || | |||| ||||||||||||||||   |  |||||||||| ||||| |||  ||||||||||| ||||||||||||||||||||    
T  3374 agagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagtttgaaggacgccaaatcgtggcacgatcttgggaaatcgtg 3473  T
Q  112 acacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||| |||   ||||||||||||||||||||  ||||||||||||||||    
T  3474 acacgattcagaaacttgctcgttaagtatcaatgataaggactagtca 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 132789 - 132917
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | | ||| |||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||| | ||||||    
T  132789 cagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgt 132888  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
    ||||  ||||||||||||||| |||||||    
T  132889 gacatgattttcaaacttgctggttaagt 132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 43472 - 43599
Alignment:
Q  12 agagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtg 111  Q
    ||||||||||||| || | | |||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||  ||||| ||| |||||||||    
T  43472 agagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagctggtttacagggtgtcaaatcgtggtacgattttgtgaaatcgtg 43571  T
Q  112 acacaattttcaaacttgctcgttaagt 139  Q
    |||  ||||||||||||||| |||||||    
T  43572 acatgattttcaaacttgctggttaagt 43599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 36376 - 36462
Alignment:
Q  45 acgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||| |||||| ||| |||| ||||||||||||||||||||||||    
T  36376 acgattttgtaatgtcgtgagctggtttgcagggtgtcaaatcgtggcacgattttgtgaaaacgtgacacaattttcaaacttgct 36462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 1120 - 1248
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||| ||||||||| || | |||||||||||||||||||||||| ||  |||||| |||||||||||||| |||||||||  ||||| ||| ||||||||    
T  1120 cagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgt 1219  T
Q  111 gacacaattttcaaacttgctcgttaagt 139  Q
    ||||| ||||| ||||||||| |||||||    
T  1220 gacacgatttttaaacttgctggttaagt 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 3145 - 2966
Alignment:
Q  15 gaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgac 113  Q
    |||||||||| || | ||||| ||||||||||||||| | ||||||||||||| || ||||||||   ||||||||| ||||||  ||||||||||||||    
T  3145 gaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgac 3047  T
Q  114 acaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    || ||    ||||||||||||||||||| ||||||||||||| ||| | |||||||||| | |  ||||||||||||||||||    
T  3046 acgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattg 2966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 2962 - 2908
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  2962 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 2908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 34590 - 34747
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgt 110  Q
    |||||||||||||| || | |||||||||||||||| ||||   |  ||||| || | ||||||| |  ||||||||||| |||||||||||||||||||    
T  34590 cagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagtttgtttgcatgacgccaaatcgtggcacgatcttgggaaatcgt 34689  T
Q  111 gacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttggg 169  Q
    ||||| |||   ||||||||||||||||||||  ||||||||||| ||| |||||||||    
T  34690 gacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttggg 34747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 8230 - 8099
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgtta 136  Q
    |||||||||||||||   |  |||||||||| |||||||||  ||||||||||| ||||||||||| |||||||||||| |||   ||||||||||||||    
T  8230 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 8131  T
Q  137 agtatccttgataaggactagtcataccttggg 169  Q
    ||||||  ||||||||||| |||| ||||||||    
T  8130 agtatcactgataaggacttgtca-accttggg 8099  T

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Target: scaffold0674 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 4254 - 4091
Alignment:
Q  31 tttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttg 129  Q
    ||||| ||||||||||||||||  | ||||||||||| || ||||||||   ||||||||| ||||||  |||||||||||||||| ||    |||||||    
T  4254 tttggaatcgtgacacgattttagg-tgccgtgagctagggttgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttg 4156  T
Q  130 ctcgttaagtatccttgataaggactagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    |||||||||||||||||||||||||| ||| | |||||||||| | |  ||||||||||||| ||||    
T  4155 ctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacaattg 4091  T

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Target: scaffold0674; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 4087 - 4033
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| |||||| |||||||    
T  4087 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcctgtgcag 4033  T

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Target: scaffold0098 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 45760 - 45666
Alignment:
Q  37 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgct 131  Q
    |||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||| ||||||  || ||||||||||||| |||||||||||||||    
T  45760 atcgtgacacaattttgtaatgtcgtgagctgatttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgct 45666  T

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Target: scaffold0464 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 909 - 760
Alignment:
Q  11 cagagaaatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagctg-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcg 109  Q
    |||||||||||||| || | ||||| ||||||||||||||  | | ||||||||||   |||||| || ||| |||||||| ||||||||||||||||||    
T  909 cagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcg 811  T
Q  110 tgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  810 tgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 760  T

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Target: scaffold0137 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 196
Target Start/End: Original strand, 5940 - 6079
Alignment:
Q  57 tgccgtgagct-ggtttgcagggtgccaaatcgtgacacgatcttgggaaa-tcgtgacacaattttcaaacttgctcgttaagtatccttgataaggac 154  Q
    ||||||||||| || ||||||||||| || ||||| ||||||  ||| ||| ||||||||| ||  | ||||||||||||||||||||||||||||||||    
T  5940 tgccgtgagctagggttgcagggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 6039  T
Q  155 tagtcataccttgggacgtatgttcaaatcgtgacacgattg 196  Q
    | ||| | |||||||||| | |  ||||||||||||||||||    
T  6040 tggtcgttccttgggacggacg--caaatcgtgacacgattg 6079  T

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Target: scaffold0137; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 6083 - 6137
Alignment:
Q  180 aaatcgtgacacgattgtatcagaggaaggctagtatttatgtgttcttgtgcag 234  Q
    ||||||||||||||||| | ||||||||| |||||| ||| ||||||||||||||    
T  6083 aaatcgtgacacgattggaacagaggaagactagtacttaagtgttcttgtgcag 6137  T

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Target: scaffold0197 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 13892 - 13969
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  13892 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 13969  T

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Target: scaffold0197; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 18772 - 18850
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcat 161  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  |||||| |||| |||||    
T  18772 aaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcat 18850  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 176558 - 176635
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtca 160  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||||||  ||||||||||| ||||    
T  176558 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 176635  T

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Target: scaffold0259 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 1847 - 1934
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggac 171  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||| ||  ||||||||||| |||| ||||||||||    
T  1847 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-accttgggac 1934  T

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Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 148552 - 148639
Alignment:
Q  83 aaatcgtgacacgatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtatccttgataaggactagtcataccttgggac 171  Q
    |||||||| |||||||||||||||||||||||| |||   ||||||||| ||||||| ||  ||||||||||| |||| ||||||||||    
T  148552 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-accttgggac 148639  T

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Target: scaffold0066 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 20942 - 20858
Alignment:
Q  39 cgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacaattttc 122  Q
    |||| ||||||||||  ||| ||||||| || ||||||||||| | |||| ||||||||| |||||||| |||||||| ||||||    
T  20942 cgtgtcacgattttgcaatgtcgtgagcatgttttgcagggtgtccaatcatgacacgattttgggaaaacgtgacacgattttc 20858  T

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Target: scaffold0466 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 6750 - 6830
Alignment:
Q  17 aatcgtgatacaaatttggcatcgtgacacgattttgtgatgccgtgagc-tggtttgcagggtgccaaatcgtgacacgat 97  Q
    |||||||| || | |||||||||||| ||||||||| | | || |||||| |||||||||||||| | ||||||||||||||    
T  6750 aatcgtgacacgattttggcatcgtggcacgattttct-aggcagtgagcatggtttgcagggtgtccaatcgtgacacgat 6830  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 434218 - 434255
Alignment:
Q  84 aatcgtgacacgatcttgggaaatcgtgacacaatttt 121  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  434218 aatcgtgacacgattttgggaaatcgtgacacgatttt 434255  T

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