View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4660_high_19 (Length: 293)
Name: NF4660_high_19
Description: NF4660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4660_high_19 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 11612660 - 11612946
Alignment:
| Q |
1 |
aggataagattacaagggttatcttagaaattgcttaatgttaaagattttgttatggttggttggtatgactgtgagagtggacctgttacagttcagc |
100 |
Q |
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| T |
11612660 |
aggataagcttaaaagggttacattagaaattgcttaatgttaaagattttgttatggttggttggtgtgactgtgagagtggacctgttacagttcagc |
11612759 |
T |
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| Q |
101 |
tggtctttatcttcaacatgaagccttttttaattttcatgtttctatatagtttggtatgatgtaatctagcttctgcttttgtcctcactctaattga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11612760 |
tggtctttatcttcaacatgaagccttttttaattttcatgtttctatatagtttggtatgatgtaatctagcttctgcttttgtcctcactctaattga |
11612859 |
T |
|
| Q |
201 |
ttttgtaaattatttccattgatctagtttcttctgcatgtttggtttgccttttagtcttaaggtccttttctttttcctttgctt |
287 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11612860 |
ttttgtaaagtatttccattgatctagtttcttctgcatgtttggtttgccttttagtcttaaggtccttttctttttcctttgctt |
11612946 |
T |
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