View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4660_low_12 (Length: 420)
Name: NF4660_low_12
Description: NF4660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4660_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 5 - 405
Target Start/End: Original strand, 46062272 - 46062672
Alignment:
| Q |
5 |
gtatattattctagtctcttatgatgctaaacatatattttaaactaactttagaagtaagttgaccctgttcatcacggttagtgccacatctcgcatt |
104 |
Q |
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| T |
46062272 |
gtatattattctagtctcttatgatgctaaacatatattttaaactaactttagaagtaagttgaccctgttcatcacggttagtgccacatctcgcatt |
46062371 |
T |
|
| Q |
105 |
aatgaaaaatacaaaatcgtccatatcacgaccaccaacataatcttcaccggttttattgttctttgggaaaaacttgaatgtgggataggaatgaaca |
204 |
Q |
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| T |
46062372 |
aatgaaaaatacaaaatcgtccatatcacgaccaccaacataatcttcaccggttttattgttctttgggaaaaacttgaatgtgggataggaatgaaca |
46062471 |
T |
|
| Q |
205 |
tcatatctgtattagcaaataaaccaaattaggcacatgcatttgttaaatatgattttaacctagtttaataagacaaatgaaaacatgtcactgcact |
304 |
Q |
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| T |
46062472 |
tcatatctgtattagcaaataaaccaaattaggcacatgcatttgttaaatatgattttaacctagtttaataagacaaatgaaaacatgtcactgcact |
46062571 |
T |
|
| Q |
305 |
cacttctcagccaaatccttgtactcgtcagcatcaagattcgctataactacatcttcctctagcctaaatgatgcagcaaccttctcataagtctaaa |
404 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
46062572 |
cacttctcagccaaatccttgtactcgtcagcatcaagattcgctataactacatcttcctctagcctaaatgctgcagcaaccttctcataagtctaaa |
46062671 |
T |
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| Q |
405 |
g |
405 |
Q |
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| T |
46062672 |
g |
46062672 |
T |
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