View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4661_high_23 (Length: 251)
Name: NF4661_high_23
Description: NF4661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4661_high_23 |
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Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 245
Target Start/End: Original strand, 9148789 - 9149041
Alignment:
| Q |
5 |
taacaatgagatgaagttttaggcatttggggaggcaagtgtgtgctttttgtatcattgcattgcatttctaactgaaaaagacaatgttgaaagttat |
104 |
Q |
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| T |
9148789 |
taacaaggaaatgaagttttaggcatttggggaggcaagtgtgtgctttttgtatcattgcattgcatttctaactgaaaaagacaatgttgaaagttat |
9148888 |
T |
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| Q |
105 |
ttatttccttcgaggtatatatgccttgataccagggagatgctgcaacttaagtccaacatcccaagataacgttggcttgcttcttaagtcattaaac |
204 |
Q |
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| T |
9148889 |
ttatttccttcaaggtatatatgccttgataccagggagatgctgcaacttaagtccaacatcccaagataacgttggcttgcttcttaagtcattaaac |
9148988 |
T |
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| Q |
205 |
cta------------ctttccaagcaatatcatgttctttttgggctgcttta |
245 |
Q |
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| T |
9148989 |
ctactttccagcttcctttccaagcaatatcatgttctttttgggctgcttta |
9149041 |
T |
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