View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4661_low_18 (Length: 293)

Name: NF4661_low_18
Description: NF4661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4661_low_18
NF4661_low_18
[»] chr7 (25 HSPs)
chr7 (123-277)||(6347117-6347271)
chr7 (123-277)||(6330639-6330793)
chr7 (39-123)||(44804520-44804604)
chr7 (39-123)||(29467751-29467835)
chr7 (36-123)||(7857009-7857095)
chr7 (36-118)||(34872174-34872256)
chr7 (36-107)||(35156995-35157066)
chr7 (36-118)||(29684113-29684195)
chr7 (39-124)||(3791478-3791563)
chr7 (36-124)||(21600970-21601058)
chr7 (36-107)||(11840447-11840518)
chr7 (53-125)||(39276611-39276683)
chr7 (36-123)||(39651148-39651235)
chr7 (53-126)||(9143470-9143546)
chr7 (39-101)||(24684636-24684698)
chr7 (53-124)||(688062-688133)
chr7 (36-121)||(17169026-17169111)
chr7 (36-124)||(48529933-48530021)
chr7 (53-123)||(21670809-21670879)
chr7 (53-125)||(49146139-49146212)
chr7 (36-125)||(27737741-27737830)
chr7 (53-124)||(4848347-4848418)
chr7 (54-101)||(31900003-31900050)
chr7 (238-275)||(6242345-6242384)
chr7 (52-92)||(42684816-42684856)
[»] chr8 (20 HSPs)
chr8 (36-124)||(24053913-24054001)
chr8 (36-125)||(36776402-36776491)
chr8 (36-121)||(40616094-40616179)
chr8 (39-114)||(40587695-40587770)
chr8 (36-117)||(9472158-9472238)
chr8 (36-107)||(25346050-25346121)
chr8 (36-102)||(41972977-41973043)
chr8 (39-101)||(8760723-8760785)
chr8 (39-101)||(25836268-25836330)
chr8 (49-121)||(45434992-45435064)
chr8 (36-107)||(42245732-42245803)
chr8 (39-101)||(1942811-1942873)
chr8 (36-100)||(44389005-44389069)
chr8 (42-101)||(8162781-8162840)
chr8 (36-123)||(18378802-18378889)
chr8 (36-107)||(41534248-41534319)
chr8 (39-101)||(32844171-32844233)
chr8 (77-124)||(41152667-41152714)
chr8 (52-124)||(19243234-19243306)
chr8 (52-124)||(19316418-19316490)
[»] chr4 (32 HSPs)
chr4 (37-124)||(51347487-51347574)
chr4 (36-124)||(50119957-50120045)
chr4 (36-118)||(24547336-24547418)
chr4 (36-121)||(13171627-13171712)
chr4 (36-124)||(3757725-3757813)
chr4 (36-127)||(36743201-36743292)
chr4 (36-124)||(20588561-20588649)
chr4 (39-124)||(24948289-24948374)
chr4 (36-124)||(17730432-17730520)
chr4 (39-107)||(29712386-29712454)
chr4 (36-107)||(30529278-30529349)
chr4 (39-124)||(43021891-43021976)
chr4 (39-124)||(39406234-39406319)
chr4 (39-124)||(53991554-53991639)
chr4 (36-124)||(3821198-3821286)
chr4 (36-124)||(39716717-39716805)
chr4 (39-101)||(8956938-8957000)
chr4 (39-101)||(8986910-8986972)
chr4 (39-101)||(37349808-37349870)
chr4 (36-117)||(16895991-16896072)
chr4 (43-124)||(35716305-35716386)
chr4 (53-101)||(5752473-5752521)
chr4 (42-101)||(9888895-9888954)
chr4 (36-123)||(35498532-35498619)
chr4 (39-107)||(578607-578675)
chr4 (36-124)||(12682755-12682843)
chr4 (36-107)||(52799041-52799112)
chr4 (69-123)||(47560251-47560305)
chr4 (39-101)||(50033703-50033764)
chr4 (52-101)||(35833429-35833478)
chr4 (36-107)||(15704127-15704198)
chr4 (53-101)||(46104201-46104249)
[»] chr6 (12 HSPs)
chr6 (36-125)||(9737752-9737841)
chr6 (39-121)||(4897497-4897579)
chr6 (36-124)||(33328277-33328365)
chr6 (53-124)||(6969312-6969383)
chr6 (53-124)||(15045563-15045634)
chr6 (36-124)||(1218517-1218605)
chr6 (36-124)||(24443926-24444014)
chr6 (36-123)||(25529241-25529328)
chr6 (36-124)||(18323834-18323922)
chr6 (36-124)||(35133173-35133260)
chr6 (53-103)||(9981276-9981326)
chr6 (53-124)||(4107953-4108024)
[»] chr5 (15 HSPs)
chr5 (36-125)||(36886968-36887057)
chr5 (36-124)||(17643385-17643473)
chr5 (36-109)||(30754423-30754496)
chr5 (36-123)||(3088031-3088118)
chr5 (39-126)||(12592471-12592558)
chr5 (36-123)||(25698717-25698804)
chr5 (39-101)||(6305452-6305514)
chr5 (39-101)||(43138549-43138611)
chr5 (36-125)||(41689273-41689362)
chr5 (42-101)||(754450-754509)
chr5 (37-100)||(12422345-12422408)
chr5 (37-87)||(42977833-42977883)
chr5 (36-124)||(30140501-30140589)
chr5 (36-123)||(33709813-33709900)
chr5 (64-123)||(26602196-26602255)
[»] chr1 (24 HSPs)
chr1 (36-121)||(46626324-46626409)
chr1 (36-124)||(19322344-19322432)
chr1 (39-124)||(38894754-38894839)
chr1 (39-123)||(33075659-33075743)
chr1 (39-124)||(22198910-22198995)
chr1 (39-126)||(1826790-1826877)
chr1 (39-124)||(29844884-29844969)
chr1 (36-121)||(19400733-19400818)
chr1 (36-124)||(16300388-16300476)
chr1 (36-127)||(1367287-1367378)
chr1 (39-123)||(42678374-42678458)
chr1 (36-121)||(51971272-51971356)
chr1 (36-124)||(4890097-4890185)
chr1 (39-107)||(10766202-10766270)
chr1 (36-124)||(17364603-17364691)
chr1 (36-124)||(29188300-29188388)
chr1 (36-124)||(33359699-33359787)
chr1 (36-124)||(47134703-47134791)
chr1 (36-100)||(50557850-50557913)
chr1 (36-124)||(52306068-52306156)
chr1 (42-101)||(28570747-28570806)
chr1 (53-124)||(10698135-10698206)
chr1 (52-121)||(43116050-43116119)
chr1 (53-101)||(5426238-5426286)
[»] chr3 (19 HSPs)
chr3 (36-124)||(29530561-29530649)
chr3 (36-124)||(8528103-8528191)
chr3 (39-118)||(35855209-35855288)
chr3 (36-121)||(26102150-26102235)
chr3 (36-107)||(19368941-19369012)
chr3 (36-121)||(28981817-28981902)
chr3 (39-121)||(11955528-11955610)
chr3 (36-121)||(40831926-40832011)
chr3 (43-124)||(22473643-22473724)
chr3 (36-124)||(11602164-11602252)
chr3 (53-101)||(18682511-18682559)
chr3 (53-124)||(8393562-8393633)
chr3 (36-101)||(22519211-22519276)
chr3 (36-107)||(55297343-55297414)
chr3 (36-102)||(19895645-19895711)
chr3 (53-123)||(33872205-33872275)
chr3 (53-125)||(26777867-26777939)
chr3 (53-124)||(4139364-4139435)
chr3 (78-124)||(48523103-48523149)
[»] chr2 (14 HSPs)
chr2 (36-124)||(10876571-10876657)
chr2 (36-112)||(19486200-19486276)
chr2 (39-121)||(17836969-17837051)
chr2 (36-114)||(42781020-42781098)
chr2 (39-124)||(32677186-32677271)
chr2 (39-121)||(9920912-9920994)
chr2 (36-123)||(4292782-4292869)
chr2 (36-127)||(10050189-10050280)
chr2 (36-122)||(9545775-9545861)
chr2 (36-102)||(19486111-19486177)
chr2 (36-121)||(2952759-2952844)
chr2 (53-124)||(28607220-28607291)
chr2 (39-107)||(18096507-18096575)
chr2 (36-124)||(24520865-24520953)
[»] scaffold0009 (2 HSPs)
scaffold0009 (37-121)||(108549-108633)
scaffold0009 (53-124)||(225434-225505)
[»] scaffold0385 (1 HSPs)
scaffold0385 (39-107)||(8303-8371)
[»] scaffold0057 (1 HSPs)
scaffold0057 (36-124)||(20579-20667)
[»] scaffold0759 (1 HSPs)
scaffold0759 (53-124)||(5908-5979)
[»] scaffold0381 (1 HSPs)
scaffold0381 (42-101)||(9591-9650)
[»] scaffold1112 (1 HSPs)
scaffold1112 (238-275)||(124-161)
[»] scaffold0069 (1 HSPs)
scaffold0069 (53-124)||(11772-11843)
[»] scaffold0051 (1 HSPs)
scaffold0051 (53-124)||(62061-62132)
[»] scaffold2079 (1 HSPs)
scaffold2079 (238-275)||(529-567)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 6347271 - 6347117
Alignment:
Q  123 atgttccaagtctcatctcatagcttcaatgttcgaagtttctaagcatttaaatataaaagtcctaaaccttccctttctctgtgtacatataaagtat 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6347271 atgttccaagtctcatctcatagcttcaatgttcgaagtttctaagcatttaaatataaaagtcctaaaccttccctttctctgtgtacatataaagtat 6347172  T
Q  223 agccagccttagacatataaaacgaattcgtattaaacgttttatgggtcactat 277  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6347171 agccagccttagacgtataaaacgaattcgtattaaacgttttatgggtcactat 6347117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 123 - 277
Target Start/End: Complemental strand, 6330793 - 6330639
Alignment:
Q  123 atgttccaagtctcatctcatagcttcaatgttcgaagtttctaagcatttaaatataaaagtcctaaaccttccctttctctgtgtacatataaagtat 222  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6330793 atgttccaagtctcatctcatagcttcagtgttcgaagtttctaagcatttaaatataaaagtcctaaaccttccctttctctgtgtacaaataaagtat 6330694  T
Q  223 agccagccttagacatataaaacgaattcgtattaaacgttttatgggtcactat 277  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6330693 agccagccttagacgtataaaacgaattcgtattaaacgttttatgggtcactat 6330639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 44804604 - 44804520
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  44804604 aaccaataaatagattaccaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatataga 44804520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 29467835 - 29467751
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  29467835 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatataga 29467751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 7857009 - 7857095
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||||||||||||||| |||||| ||| |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  7857009 ctcaaccaataaatagattatcaaattaccc-ttatagaaacaaaacggtaaattcaagggacatttcttttcttattagtatataga 7857095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 34872256 - 34872174
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtat 118  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||||| ||||||    
T  34872256 ctcaaccaataagtagattaccaaattgccccttatagggacaaaatggtaagttcaaaggacatttcttttcttactagtat 34872174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 35156995 - 35157066
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  35156995 ctcaaccgataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagtgacatttctttt 35157066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 29684113 - 29684195
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtat 118  Q
    |||||||||| | |||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||  |||||||||    
T  29684113 ctcaaccaattagtagattaccaaattgccccttataggggtaaaatggtaaattcaaggcacatttctttttatattagtat 29684195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 3791563 - 3791478
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||||  ||| |||||||||||    
T  3791563 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccataggacatttcttttaatataagtatatagat 3791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 21600970 - 21601058
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||| |||||||||||||  ||  |||||||||||    
T  21600970 ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttcttttaatagaagtatatagat 21601058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 11840447 - 11840518
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  11840447 ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttctttt 11840518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 39276683 - 39276611
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 125  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  39276683 ttaccaaattaccctttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatatagatg 39276611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 39651148 - 39651235
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||||| | ||  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| ||||||||||    
T  39651148 ctcaaccaattagtaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 39651235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 9143546 - 9143470
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaaggga---catttcttttcttattagtatatagatgt 126  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    |||||||||  |||||||||||||||||    
T  9143546 ttaccaaattgccccttataggggcaaaatggtaaattcaagggatattatttctttttatattagtatatagatgt 9143470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 24684636 - 24684698
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  24684636 aaccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattcatgggacatt 24684698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 688133 - 688062
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||   |||  |||||||||||||||    
T  688133 ttaccaaattgccccttataggggcaaaatggtaaattcaaaggacattaacttttatattagtatatagat 688062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 17169111 - 17169026
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||| ||||||| ||  |||||||||||||| | ||||| |||||||||||||||||| |||||||||||||  ||| ||||||||    
T  17169111 ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatata 17169026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 48529933 - 48530021
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  |||||||||||||||  ||||| |||||||||||| ||||| |||||||||||||  ||| |||||||||||    
T  48529933 ctcagccaataattaatttaccaaattgcccccaataggggcaaaatggtaatttcaaaggacatttcttttaatataagtatatagat 48530021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 21670809 - 21670879
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    ||||||||||  || ||||||| ||||||| ||||||||||||||||||||||||  ||| ||||||||||    
T  21670809 ttaccaaattatcctttataggggcaaaatagtaaattcaagggacatttcttttaatataagtatataga 21670879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 49146139 - 49146212
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatt-tcttttcttattagtatatagatg 125  Q
    |||||||||||||||| ||||| ||||||||||||| |||| |||||||  |||||  ||||||||||||||||    
T  49146139 ttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacattaactttttatattagtatatagatg 49146212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 27737741 - 27737830
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 125  Q
    |||||||||| | ||  ||||||||||  || ||||||| | ||||||||||||||||||||| ||||||||  ||  ||||||||||||    
T  27737741 ctcaaccaattagtaatttaccaaattatcctttataggggtaaaatggtaaattcaagggacttttctttttatagaagtatatagatg 27737830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 4848418 - 4848347
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| ||||| ||||| ||||||||||||| |||| |||||||   |||  |||||||||||||||    
T  4848418 ttaccaaattacccctcataggggcaaaatggtaaaatcaatggacattaacttttatattagtatatagat 4848347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 31900003 - 31900050
Alignment:
Q  54 taccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||||||||| ||||| ||||||| |||||||||| |||||||    
T  31900003 taccaaattgcccctaataggggcaaaattgtaaattcaaaggacatt 31900050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 6242345 - 6242384
Alignment:
Q  238 tataaaacgaattcgtattaaacgtttt--atgggtcact 275  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  6242345 tataaaacgaattcgtattaaacgtttttaatgggtcact 6242384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 42684856 - 42684816
Alignment:
Q  52 attaccaaattgccccttataggagcaaaatggtaaattca 92  Q
    ||||| ||| ||||||||||||| |||||||||||||||||    
T  42684856 attactaaaatgccccttataggggcaaaatggtaaattca 42684816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 24054001 - 24053913
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24054001 ctcaaccaataagtagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 24053913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 36776491 - 36776402
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 125  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36776491 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 36776402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 40616094 - 40616179
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  40616094 ctcaaccaattagtagattaccaaattgcctcttataggagcaaaatggtaaattcaagggacatggattttcttattagtatata 40616179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 40587695 - 40587770
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttatta 114  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  40587695 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatggacatttattttcttatta 40587770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 9472238 - 9472158
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagta 117  Q
    |||||||||||| |||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  9472238 ctcaaccaataagtagattaccaaattgccc-ttatagaggcaaaatggtaatttcaagggacatttcttttcttattagta 9472158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 25346121 - 25346050
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  25346121 ctcaaccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattcaatggacatttctttt 25346050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 41973043 - 41972977
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacattt 102  Q
    |||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41973043 ctcaaccaattagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacattt 41972977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 8760785 - 8760723
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  8760785 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatt 8760723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 25836268 - 25836330
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  25836268 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatt 25836330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 45435064 - 45434992
Alignment:
Q  49 tagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||   ||||||||||||||||||    
T  45435064 tagattaccaaattgccccttataagggcaaaatggtaaattcaagtgacatggattttcttattagtatata 45434992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 42245732 - 42245803
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||||| ||||||| |||||| ||||||||||| |||||||||| |||||||| ||||||||||||    
T  42245732 ctcaaccaataagtagattatcaaattaccccttataggggcaaaatggtgaattcaagtgacatttctttt 42245803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 1942873 - 1942811
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  1942873 aaccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattcatgggacatt 1942811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 44389005 - 44389069
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacat 100  Q
    |||||||||| |||||||||||||||| ||||||||| | | |||||||||||||||||||||||    
T  44389005 ctcaaccaattaatagattaccaaattaccccttataagggaaaaatggtaaattcaagggacat 44389069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 8162781 - 8162840
Alignment:
Q  42 caataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  8162781 caataagtagattaccaaattgacccttataggggcaaaatggtaaattcatgggacatt 8162840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 18378802 - 18378889
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||||||| ||  |||||||||||||||| ||||  |||||||| ||||||||| |||||||||||||  ||| ||||||||||    
T  18378802 ctcaaccaataattaatttaccaaattgcccctaatagaggcaaaatgataaattcaaaggacatttcttttaatataagtatataga 18378889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 41534248 - 41534319
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||| ||||  ||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  41534248 ctcaaccaattaataatttatcaaattgtcccttataggagcaaaatggtaaattcatgggacatttatttt 41534319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 32844233 - 32844171
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| ||||||||||||||||||||||| || ||||||||||||||| | ||||||||    
T  32844233 aaccaataagtagattaccaaattgccccttatcggggcaaaatggtaaatttatgggacatt 32844171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 41152714 - 41152667
Alignment:
Q  77 caaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||    
T  41152714 caaaatggtaaattcaagggacatttctttttatataagtatatagat 41152667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 19243306 - 19243234
Alignment:
Q  52 attaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||||||||||| | ||| |||||| |||||| ||||  |||||  |||||  |||||||||||||||    
T  19243306 attaccaaattgcccctaagaggggcaaaaaggtaaaatcaacagacatcactttttatattagtatatagat 19243234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 19316490 - 19316418
Alignment:
Q  52 attaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||||||||||| | ||| |||||| |||||| ||||  |||||  |||||  |||||||||||||||    
T  19316490 attaccaaattgcccctaagaggggcaaaaaggtaaaatcaacagacatcactttttatattagtatatagat 19316418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 6e-40; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 51347574 - 51347487
Alignment:
Q  37 tcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51347574 tcaaccaataaatagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 51347487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 50119957 - 50120045
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50119957 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacattccttttcttattagtatatagat 50120045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 24547418 - 24547336
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtat 118  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  24547418 ctcaaccaataaatagattaccaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtat 24547336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 13171712 - 13171627
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  13171712 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttcttattagtatata 13171627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 3757813 - 3757725
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  3757813 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatgaacatttcttttcttattagtatatagat 3757725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 36743201 - 36743292
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatgtt 127  Q
    |||||||||||| |||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36743201 ctcaaccaataagtagattaccaaattgccccttatagagacaaaatggtaaatttaagggacatttcttttcttattagtatatagatgtt 36743292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 20588649 - 20588561
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||| | |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20588649 ctcaaccaataagtggattaccaaattgccccttatagaggcaaaatggtgaattcaagggacatttcttttcttattagtatatagat 20588561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 24948289 - 24948374
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  24948289 aaccaataagtagatttccaaattgccccttataggagcaaaatggtaaattcaaaggacatttctttttatataagtatatagat 24948374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 17730520 - 17730432
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| | ||||| ||||||||    
T  17730520 ctcaaccaattagtagattaccaaattgccccttataggagcaaaatggtaaattcaaagcacatttcttttttgattagcatatagat 17730432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 29712454 - 29712386
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  29712454 aaccaataaatagattaccaaattgccccttataggggcaaaatggtaaatttaagggacatttctttt 29712386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 30529278 - 30529349
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  30529278 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggatatttctttt 30529349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 43021976 - 43021891
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||||||||||||| ||| ||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  43021976 aaccaataagtagattaccaaattgcacctaatagaggcaagatggtaaattcaaggaacatttcttttcttattagtatatagat 43021891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 39406234 - 39406319
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||  ||| |||||||||||    
T  39406234 aaccaataagtagattaccaaattaccccttataggggctaaatggtaaattcaaggaacatttctttttatataagtatatagat 39406319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 53991554 - 53991639
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||| || || |||||||||||  ||| |||||||||||    
T  53991554 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatatagat 53991639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 3821198 - 3821286
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | ||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||| |||||||||||    
T  3821198 ctcaaccaattagtaatttaccaaattgccccttataggggcaaaatggtaaattcaagggacattacttttaatataagtatatagat 3821286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 39716717 - 39716805
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  39716717 ctcaaccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 39716805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 8957000 - 8956938
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  8957000 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatt 8956938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 8986972 - 8986910
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  8986972 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatt 8986910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 37349870 - 37349808
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  37349870 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatt 37349808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 16896072 - 16895991
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagta 117  Q
    |||||||||| ||||||||||||||| |||||||||| | ||||||| |||||||||||||||||   ||||||||||||||    
T  16896072 ctcaaccaattaatagattaccaaatagccccttataagggcaaaattgtaaattcaagggacatggattttcttattagta 16895991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 35716305 - 35716386
Alignment:
Q  43 aataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| || || |||||||||||  ||| |||||||||||    
T  35716305 aataagtagattaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatatagat 35716386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 5752521 - 5752473
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5752521 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatt 5752473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 9888895 - 9888954
Alignment:
Q  42 caataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  9888895 caataagtagattaccaaattgacccttataggggcaaaatggtaaattcatgggacatt 9888954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 35498532 - 35498619
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||||| | ||  ||||||||||| || ||||||| |||||||| |||||||||||| ||||||||||  ||||||||||||||    
T  35498532 ctcaaccaattagtaatttaccaaattgtcctttataggggcaaaatgataaattcaagggccatttctttttatattagtatataga 35498619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 578607 - 578675
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||  | | ||||||||||||    
T  578607 aaccaataagtagattaccaaattgtcccttataggggcaaaatggtaaatcaatgagacatttctttt 578675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 12682755 - 12682843
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||||  |||  |||||||||||||||| ||||| ||||||||||||| |||| |||||||   |||  |||||||||||||||    
T  12682755 ctcaaccaatttataatttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacattaacttttatattagtatatagat 12682843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 52799112 - 52799041
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||| ||||||| ||  |||||||||||||||| ||||| | ||||||||||||| || |||||||||||||    
T  52799112 ctcagccaataattaatttaccaaattgcccctaataggggtaaaatggtaaatttaaaggacatttctttt 52799041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 47560251 - 47560305
Alignment:
Q  69 tataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||| |||||||||||||||||||||||||| |||||  ||| ||||||||||    
T  47560251 tataggggcaaaatggtaaattcaagggacattacttttaatataagtatataga 47560305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 50033764 - 50033703
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| ||||||||||||||| |||||||| | |||||||||||||||||  |||||||    
T  50033764 aaccaataagtagattaccaaattg-cccttataagggcaaaatggtaaattcataggacatt 50033703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 35833429 - 35833478
Alignment:
Q  52 attaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||||||||||| ||||| ||||||||||||| |||| |||||||    
T  35833429 attaccaaattgcccctcataggggcaaaatggtaaaatcaatggacatt 35833478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 15704198 - 15704127
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||| | ||  |||||||||| ||||||||||| ||||||||||||||| || | ||||| |||||    
T  15704198 ctcaaccaattagtaatttaccaaatttccccttataggggcaaaatggtaaatttaaagaacattactttt 15704127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 46104249 - 46104201
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||||||||||||| || || ||||||||||||| |||| |||||||    
T  46104249 ttaccaaattgcccctcattggggcaaaatggtaaaatcaatggacatt 46104201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 9737752 - 9737841
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 125  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9737752 ctcaaccaataaatagattatcaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 9737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 4897497 - 4897579
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||    
T  4897497 aaccaataaatagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatata 4897579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 33328277 - 33328365
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | |||| |||||||||||||||| |||||||||||||||||||| || ||||||   |||||||||| ||||||||||    
T  33328277 ctcaaccaattagtagactaccaaattgccccttgtaggagcaaaatggtaaatttaaaggacatggattttcttatttgtatatagat 33328365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 6969312 - 6969383
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||   |||  |||||||||||||||    
T  6969312 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacattaacttttatattagtatatagat 6969383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 15045563 - 15045634
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  15045563 ttaccaaattaccctttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatatagat 15045634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 1218605 - 1218517
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  |||||||||||||| | ||||| |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  1218605 ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 1218517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 24444014 - 24443926
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||  ||| |||||||||||    
T  24444014 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggatatttcttttaatataagtatatagat 24443926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 25529328 - 25529241
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| |||||  ||| ||||||   ||||  ||||||||||||||    
T  25529328 ctcaaccaattagtagattaccaaattgccccttataggagcaaaatcgtaaaagcaacggacatggatttttatattagtatataga 25529241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 18323922 - 18323834
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  ||||||||||||   | ||||| |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  18323922 ctcagccaataattaatttaccaaattgcttttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 18323834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 35133260 - 35133173
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | ||||||| |||||||||| ||||||  ||||||||||||||| || ||||||   |||||||||| ||||||||||    
T  35133260 ctcaaccaattagtagattatcaaattgccc-ttatagaggcaaaatggtaaatttaaaggacatggattttcttatttgtatatagat 35133173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 9981276 - 9981326
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttc 103  Q
    |||||||||||||||||||||| | |||||||||||||||| | |||||||    
T  9981276 ttaccaaattgccccttataggggtaaaatggtaaattcaatgaacatttc 9981326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 4108024 - 4107953
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||| ||||| | ||||||||||| |||| |||||||   |||  |||||||||||||||    
T  4108024 ttaccaaattgcccctcataggggaaaaatggtaaaatcaatggacattaacttttatattagtatatagat 4107953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 36886968 - 36887057
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 125  Q
    ||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36886968 ctcaatcaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 36887057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 17643385 - 17643473
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||||||||||||||||    
T  17643385 ctcaaccaataaatagattaccaaattgccccttataagggcaaaatgataaattcaagggacatttattttcttattagtatatagat 17643473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 30754496 - 30754423
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttct 109  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  30754496 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaaaggacatttcttttct 30754423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 3088031 - 3088118
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||| ||||||||||    
T  3088031 ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaagggacattacttttaatataagtatataga 3088118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 12592471 - 12592558
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatgt 126  Q
    ||||||||| |||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||||  ||| |||||||||||||    
T  12592471 aaccaataagtagattaccaaattgccccttataggggtaaactggtaaattcatgggacatttctttttatataagtatatagatgt 12592558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 25698717 - 25698804
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| ||||||||||    
T  25698717 ctcaaccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 25698804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 6305452 - 6305514
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  6305452 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatt 6305514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 43138549 - 43138611
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  43138549 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatt 43138611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 41689362 - 41689273
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 125  Q
    |||| ||||||| ||  |||||||||||||| | ||||| |||||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  41689362 ctcagccaataattaatttaccaaattgcccataataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagatg 41689273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 754450 - 754509
Alignment:
Q  42 caataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  754450 caataagtagattaccaaattgacccttataggggcaaaatggtaaattcatgggacatt 754509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 12422345 - 12422408
Alignment:
Q  37 tcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacat 100  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  12422345 tcaaccaattagtagattaccaaattgccccttataggggcaaaatggtaaaatcaaaggacat 12422408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 42977833 - 42977883
Alignment:
Q  37 tcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaa 87  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  42977833 tcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaa 42977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 30140589 - 30140501
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | ||  |||||||||| ||| | ||||| |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  30140589 ctcaaccaattagtaatttaccaaattacccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 30140501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 33709813 - 33709900
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||||| | ||  |||||||||||||| ||||||| | ||||||||||||||||||||||||  ||||  ||| ||||||||||    
T  33709813 ctcaaccaattactaatttaccaaattgccctttataggggtaaaatggtaaattcaagggacattaattttaatataagtatataga 33709900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 26602196 - 26602255
Alignment:
Q  64 ccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    ||||||||| | | ||||||||||||||||||||||||||||||  ||| ||||||||||    
T  26602196 ccccttataagggtaaaatggtaaattcaagggacatttctttttatataagtatataga 26602255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 46626324 - 46626409
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46626324 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatata 46626409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 19322344 - 19322432
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19322344 ctcaaccaataagtagaataccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttcttattagtatatagat 19322432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 38894839 - 38894754
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  38894839 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatggacatttactttcttattagtatatagat 38894754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 33075659 - 33075743
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  33075659 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatataga 33075743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 22198910 - 22198995
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||| |||||||||||    
T  22198910 aaccaataagtagattaccaaattgccccttataggggcaaaatgataaattcaagggacatttcttttaatataagtatatagat 22198995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 1826877 - 1826790
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatgt 126  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||  ||| |||||||||||||    
T  1826877 aaccaataaatagattaccaaattgccccttatagagccaaaatggtaaattcaagggacattacttttaatataagtatatagatgt 1826790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 29844884 - 29844969
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||  ||| |||||||||||    
T  29844884 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatatagat 29844969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 19400818 - 19400733
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||| ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||   ||||||||||||||||||    
T  19400818 ctcaaccaattaatagattaccgaattaccccttatatgggcaaaatggtaaattcaagggacatggattttcttattagtatata 19400733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 16300476 - 16300388
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||| |||||||||||    
T  16300476 ctcaaccaattagtaatttaccaaattgccccttataggagcaaaatggtaaattcaagggacattaattttaatataagtatatagat 16300388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 1367378 - 1367287
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatgtt 127  Q
    |||| ||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| ||||||||||||||    
T  1367378 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagatgtt 1367287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 42678458 - 42678374
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    ||||||||| ||||||| ||||||||||||||||||   ||||||||||||||| ||||||||||||||  ||| ||||||||||    
T  42678458 aaccaataagtagattatcaaattgccccttatagggataaaatggtaaattcatgggacatttctttttatataagtatataga 42678374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 51971272 - 51971356
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||| |||||||||||||||| ||| |||||||  ||||||||||| ||||||||||||   ||||||||||||||||||    
T  51971272 ctcaaccaattaatagattaccaaattaccc-ttatagggacaaaatggtaacttcaagggacatgaattttcttattagtatata 51971356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 4890185 - 4890097
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  |||||||||||||||| ||||  |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  4890185 ctcagccaataattaatttaccaaattgcccctaatagaggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 4890097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 10766270 - 10766202
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||| ||  |||||||||||||    
T  10766270 aaccaataagtagattaccaaattgacccttataggggcaaaatggtaaatccataggacatttctttt 10766202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 17364603 - 17364691
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||  ||| |||||||||||    
T  17364603 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggatatttcttttaatataagtatatagat 17364691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 29188300 - 29188388
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  |||||||||||||| | ||||| |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  29188300 ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 29188388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 33359787 - 33359699
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  |||||||||||||| | ||||| |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  33359787 ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 33359699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 47134791 - 47134703
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | ||  |||||||||||||||||||||| |||||||||||||||||| ||||||| | |||  ||| |||||||||||    
T  47134791 ctcaaccaattagtaatttaccaaattgccccttataggggcaaaatggtaaattcaatggacattaccttttatataagtatatagat 47134703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 50557913 - 50557850
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacat 100  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  50557913 ctcaaccaattagtagattaccaaattgccccttatagga-caaaatggtaaattcatgggacat 50557850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 52306156 - 52306068
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | ||  ||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||  ||| |||||||||||    
T  52306156 ctcaaccaattagtaatttatcaaattgccccttataggggcaaaatggtaaattaaagggatatttctttttatataagtatatagat 52306068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 28570806 - 28570747
Alignment:
Q  42 caataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  28570806 caataagtagattaccaaattgacccttataggggcaaaatggtaaattcatgggacatt 28570747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 10698135 - 10698206
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||| |||||||| |||| ||||||||||||||| |  |||||||||||||  | |||| ||||||||    
T  10698135 ttaccaaaatgccccttctaggggcaaaatggtaaatttattggacatttctttttatgttagcatatagat 10698206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 43116119 - 43116050
Alignment:
Q  52 attaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||||||||||  |||| ||||||| | |||||||| |||||| | ||||  ||||||||||||    
T  43116119 attaccaaattgcccctcctaggggcaaaattggaaattcaatggacatgtatttttatattagtatata 43116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 5426286 - 5426238
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    ||||||||||||||||| || | ||||||||||||| |||| |||||||    
T  5426286 ttaccaaattgccccttctaagggcaaaatggtaaaatcaatggacatt 5426238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 29530561 - 29530649
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29530561 ctcaaccaataagtagattaccaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatatagat 29530649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 8528103 - 8528191
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||||||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  8528103 ctcaaccaataaatatattaccaaattgccccttatagggacagaatggtaaattcaagggacatttcttttcttattagtatatagat 8528191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 35855288 - 35855209
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtat 118  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  35855288 aaccaataaatagattaccaaattgccccttataggggcaaaatggtaaatttaagggacatttcttttcttattagtat 35855209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 26102150 - 26102235
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    ||||||||||||  ||||||||||||| || |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  26102150 ctcaaccaataagcagattaccaaattacctcttataggggcaaaatggtaaattcaaaggacatttcttttcttattagtatata 26102235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 19368941 - 19369012
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  19368941 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaaatcaagggacatttctttt 19369012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 28981817 - 28981902
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||    
T  28981817 ctcaaccaattagttgattaccaaattgccccttataggggcaaaatggtaaattcaagggacatggattttcttattagtatata 28981902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 11955528 - 11955610
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||  ||| ||||||||    
T  11955528 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatata 11955610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 40831926 - 40832011
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||||||||| | ||||||||| ||||| ||||||||||||||||||||||||||||||||||||   |||||||||||| |||||    
T  40831926 ctcaaccaattagtagattaccgaattgtcccttataggagcaaaatggtaaattcaagggacatggattttcttattaggatata 40832011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 22473724 - 22473643
Alignment:
Q  43 aataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| || || |||||||||||  ||| |||||||||||    
T  22473724 aataagtagattaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatatagat 22473643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 11602164 - 11602252
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| ||||||||||  |||||||||||||||| ||||||||||||| |||| ||||||   ||||  |||||||||||||||    
T  11602164 ctcaaccaattaatagattactgaattgccccttataggggcaaaatggtaaaatcaacggacatggatttttatattagtatatagat 11602252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 18682559 - 18682511
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18682559 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatt 18682511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 8393633 - 8393562
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||   |||  |||||||||||||||    
T  8393633 ttaccaaattgccccttataggggcaaaatggtaaattcaaaggacattaacttttatattagtatatagat 8393562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 22519276 - 22519211
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||||||| ||||  |||| ||||||||||||||||| |||||||||||||||||| |||||||    
T  22519276 ctcaaccaattaataatttactaaattgccccttataggggcaaaatggtaaattcaatggacatt 22519211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 55297343 - 55297414
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    |||||||||| ||||  |||||||||| ||| ||||||| | |||||||||||||| |||||||||||||||    
T  55297343 ctcaaccaattaataatttaccaaattaccctttataggggtaaaatggtaaattcgagggacatttctttt 55297414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 19895645 - 19895711
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacattt 102  Q
    |||||||||| | ||  |||||||||||||| ||||| | |||||||||||||||||| ||||||||    
T  19895645 ctcaaccaattactaatttaccaaattgccctttataagggcaaaatggtaaattcaatggacattt 19895711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 33872275 - 33872205
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||||||| || ||||| ||||  ||||||||||||||||  |||||||||||||  ||||||||||||||    
T  33872275 ttaccaaaatggcccttctagggacaaaatggtaaattcatcggacatttctttttatattagtatataga 33872205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 26777867 - 26777939
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatg 125  Q
    |||||||||||||||| ||||| ||||||||||||| |||| |||| ||   |||  ||||||||||||||||    
T  26777867 ttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacgttaacttttatattagtatatagatg 26777939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 4139364 - 4139435
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||| |||||  |||||||||||| |||| |||||||   |||  |||||||||||||||    
T  4139364 ttaccaaattgcccctaatagggacaaaatggtaaaatcaatggacattaacttttatattagtatatagat 4139435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 48523103 - 48523149
Alignment:
Q  78 aaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||| ||| |||||||||||  |||||||||||||||    
T  48523103 aaaatggtaaattctaggaacatttctttttatattagtatatagat 48523149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 10876571 - 10876657
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10876571 ctcaaccaataagtagattaccaaattgcccctta--ggggcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 10876657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 19486276 - 19486200
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttat 112  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19486276 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttat 19486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 17837051 - 17836969
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||    
T  17837051 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatata 17836969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 42781098 - 42781020
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttatta 114  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||    
T  42781098 ctcaaccaataaatagattaccaaattgccccttacagggacaaaatgataaattcaagggacatttcttttcttatta 42781020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 32677186 - 32677271
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||| |||||||||||    
T  32677186 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttaatataagtatatagat 32677271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 9920912 - 9920994
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||  ||| ||||||||    
T  9920912 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatata 9920994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 4292782 - 4292869
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatataga 123  Q
    |||| ||||||| ||  |||||||||||||| | |||||||||||||||||||||||| |||||||||||||  ||| ||||||||||    
T  4292782 ctcagccaataattaatttaccaaattgcccttaataggagcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 4292869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 10050189 - 10050280
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagatgtt 127  Q
    |||||||||| | ||  ||| |||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| ||||||||||||||    
T  10050189 ctcaaccaattagtaatttatcaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagatgtt 10050280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 9545775 - 9545861
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatag 122  Q
    |||| ||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| |||||||||    
T  9545775 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatag 9545861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 19486111 - 19486177
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacattt 102  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| ||| ||||    
T  19486111 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatgataaattcaatggatattt 19486177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 2952844 - 2952759
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    |||| ||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| ||||||||    
T  2952844 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatata 2952759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 28607291 - 28607220
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||| ||||  ||| |||||||||||    
T  28607291 ttaccaaattgccccttatagggacaaaatggtaaattcaatggacatttattttaatataagtatatagat 28607220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 18096575 - 18096507
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    ||||||| ||||  || ||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  18096575 aaccaattaataatttgccaaattaccccttataggggcaaaatggtaaattcaaaggacatttctttt 18096507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 24520953 - 24520865
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||| | ||  |||||||||||| ||||||||  |||||||  |||||||||||||||||||||||  ||| |||||||||||    
T  24520953 ctcaaccaattagtaatttaccaaattgctccttatagaggcaaaattataaattcaagggacatttctttttatataagtatatagat 24520865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 108633 - 108549
Alignment:
Q  37 tcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatata 121  Q
    ||||||||||  |||||||||||||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||    
T  108633 tcaaccaatacgtagattaccaaattaccccttatggggacaaaatggtaaattcaagggacatttcttttcttattagtatata 108549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 225505 - 225434
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  225505 ttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttcttttaatataagtatatagat 225434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 8303 - 8371
Alignment:
Q  39 aaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttctttt 107  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  8303 aaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcatgggacatttctttt 8371  T

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Target: scaffold0057 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 20579 - 20667
Alignment:
Q  36 ctcaaccaataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||| ||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  20579 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 20667  T

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Target: scaffold0759 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 5908 - 5979
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||   |||  |||||||||||||||    
T  5908 ttaccaaattgccccttataggggcaaaatggtaaattcatgggacattaacttttatattagtatatagat 5979  T

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Target: scaffold0381 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 9650 - 9591
Alignment:
Q  42 caataaatagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatt 101  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  9650 caataagtagattaccaaattgacccttataggggcaaaatggtaaattcatgggacatt 9591  T

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Target: scaffold1112 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 124 - 161
Alignment:
Q  238 tataaaacgaattcgtattaaacgttttatgggtcact 275  Q
    ||||||||||||||||||||||||||||||||||||||    
T  124 tataaaacgaattcgtattaaacgttttatgggtcact 161  T

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Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 11843 - 11772
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||| |||   ||||||||||||||||||  ||||||||||||  ||| |||||||||||    
T  11843 ttaccaaattgcccctaataaaggcaaaatggtaaattcaaatgacatttcttttaatataagtatatagat 11772  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 62132 - 62061
Alignment:
Q  53 ttaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 124  Q
    |||||||||||||||| ||||| ||||||||||||| |||| |||||||   |||  |||||||||||||||    
T  62132 ttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacattaacttttatattagtatatagat 62061  T

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Target: scaffold2079 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2079
Description:

Target: scaffold2079; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 529 - 567
Alignment:
Q  238 tataaaacgaattcgtattaaacg-ttttatgggtcact 275  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  529 tataaaacgaattcgtattaaacgtttttatgggtcact 567  T

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