View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4661_low_20 (Length: 282)

Name: NF4661_low_20
Description: NF4661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4661_low_20
NF4661_low_20
[»] chr8 (39 HSPs)
chr8 (1-271)||(8056445-8056723)
chr8 (1-154)||(15968023-15968177)
chr8 (1-154)||(15968387-15968539)
chr8 (1-154)||(43599304-43599457)
chr8 (4-122)||(25186549-25186666)
chr8 (36-154)||(43901011-43901128)
chr8 (2-154)||(10989200-10989352)
chr8 (1-154)||(8559574-8559727)
chr8 (1-154)||(33435672-33435825)
chr8 (2-154)||(15010988-15011140)
chr8 (1-147)||(3895131-3895276)
chr8 (80-154)||(33435876-33435950)
chr8 (36-154)||(20760653-20760771)
chr8 (80-149)||(8056274-8056343)
chr8 (2-122)||(35561483-35561604)
chr8 (36-154)||(10989027-10989145)
chr8 (80-154)||(18313777-18313851)
chr8 (7-65)||(25186491-25186549)
chr8 (43-147)||(15968187-15968290)
chr8 (38-138)||(25186781-25186880)
chr8 (1-61)||(41456467-41456527)
chr8 (80-154)||(5720904-5720978)
chr8 (36-154)||(40902386-40902504)
chr8 (80-153)||(35561660-35561733)
chr8 (106-154)||(30065984-30066032)
chr8 (31-122)||(16051243-16051333)
chr8 (83-154)||(37537135-37537206)
chr8 (43-154)||(42228764-42228875)
chr8 (87-154)||(42447255-42447322)
chr8 (20-126)||(3183888-3183994)
chr8 (48-126)||(3895400-3895477)
chr8 (20-66)||(7729752-7729798)
chr8 (35-125)||(34248381-34248471)
chr8 (36-140)||(41456316-41456416)
chr8 (80-154)||(45122304-45122377)
chr8 (20-68)||(7621973-7622021)
chr8 (4-56)||(22188776-22188828)
chr8 (38-138)||(34248086-34248186)
chr8 (1-33)||(36039950-36039982)
[»] chr2 (47 HSPs)
chr2 (2-154)||(39386663-39386815)
chr2 (29-154)||(29676287-29676412)
chr2 (2-138)||(3435445-3435581)
chr2 (2-154)||(12431891-12432043)
chr2 (36-154)||(32667176-32667294)
chr2 (36-154)||(20998982-20999100)
chr2 (4-154)||(39108081-39108231)
chr2 (37-154)||(883595-883712)
chr2 (5-154)||(29684004-29684153)
chr2 (31-147)||(17264963-17265079)
chr2 (36-128)||(17265216-17265308)
chr2 (2-154)||(33985934-33986086)
chr2 (36-150)||(4721799-4721911)
chr2 (1-154)||(32666970-32667124)
chr2 (36-154)||(34775350-34775468)
chr2 (80-154)||(36264065-36264138)
chr2 (37-154)||(17727397-17727514)
chr2 (1-154)||(31761125-31761278)
chr2 (79-128)||(36264190-36264239)
chr2 (2-150)||(883847-883995)
chr2 (36-154)||(8044538-8044657)
chr2 (31-122)||(10485219-10485309)
chr2 (36-154)||(25621278-25621396)
chr2 (48-154)||(27545121-27545227)
chr2 (36-138)||(31761340-31761442)
chr2 (2-66)||(7257096-7257161)
chr2 (80-154)||(29676145-29676217)
chr2 (40-154)||(884050-884164)
chr2 (80-154)||(6986453-6986527)
chr2 (40-154)||(19860030-19860144)
chr2 (80-154)||(29695376-29695450)
chr2 (2-66)||(7257566-7257631)
chr2 (89-154)||(12419831-12419896)
chr2 (43-108)||(39108394-39108459)
chr2 (110-154)||(12343641-12343685)
chr2 (111-154)||(10570928-10570971)
chr2 (1-36)||(17727308-17727343)
chr2 (83-154)||(19859918-19859989)
chr2 (36-154)||(33985764-33985880)
chr2 (20-138)||(3976980-3977098)
chr2 (1-43)||(8044753-8044795)
chr2 (80-154)||(10542100-10542174)
chr2 (3-61)||(29695505-29695563)
chr2 (36-138)||(43195793-43195895)
chr2 (80-141)||(32975257-32975318)
chr2 (154-194)||(29676284-29676324)
chr2 (216-260)||(34622209-34622253)
[»] chr4 (45 HSPs)
chr4 (4-154)||(14944887-14945037)
chr4 (1-154)||(3640199-3640352)
chr4 (1-154)||(47491805-47491957)
chr4 (3-154)||(56511290-56511441)
chr4 (1-141)||(45684348-45684487)
chr4 (5-154)||(12016853-12017002)
chr4 (36-154)||(8304949-8305066)
chr4 (36-154)||(14945136-14945254)
chr4 (1-154)||(28245784-28245934)
chr4 (36-154)||(56511497-56511615)
chr4 (36-154)||(3640449-3640568)
chr4 (4-126)||(14115707-14115828)
chr4 (36-154)||(29113442-29113560)
chr4 (36-154)||(43943666-43943784)
chr4 (1-154)||(17077102-17077255)
chr4 (3-126)||(10390435-10390558)
chr4 (3-154)||(39110710-39110861)
chr4 (36-154)||(12016676-12016794)
chr4 (2-154)||(5488360-5488512)
chr4 (36-138)||(8559964-8560066)
chr4 (31-126)||(41743557-41743651)
chr4 (36-154)||(25753598-25753716)
chr4 (80-154)||(45684211-45684285)
chr4 (36-148)||(14115485-14115596)
chr4 (91-154)||(1923039-1923102)
chr4 (43-154)||(28245986-28246097)
chr4 (80-138)||(7892689-7892747)
chr4 (20-154)||(27634303-27634437)
chr4 (81-154)||(39110900-39110973)
chr4 (86-154)||(9758297-9758365)
chr4 (90-154)||(28497261-28497325)
chr4 (2-66)||(35399375-35399439)
chr4 (1-64)||(1923154-1923217)
chr4 (1-56)||(29113335-29113390)
chr4 (36-154)||(17076933-17077051)
chr4 (80-154)||(23350792-23350866)
chr4 (36-154)||(28395171-28395288)
chr4 (48-154)||(53863898-53864004)
chr4 (2-66)||(27634490-27634554)
chr4 (2-154)||(49380840-49380991)
chr4 (38-154)||(54210370-54210486)
chr4 (154-193)||(3640197-3640236)
chr4 (36-138)||(15665162-15665264)
chr4 (36-125)||(52214637-52214726)
chr4 (154-194)||(3640446-3640486)
[»] chr3 (75 HSPs)
chr3 (4-154)||(40926447-40926596)
chr3 (4-150)||(26926904-26927049)
chr3 (1-154)||(32034084-32034236)
chr3 (1-146)||(40926782-40926926)
chr3 (2-154)||(4191081-4191233)
chr3 (3-154)||(35011650-35011801)
chr3 (1-154)||(9264458-9264611)
chr3 (21-154)||(44367572-44367704)
chr3 (2-154)||(37058730-37058882)
chr3 (2-154)||(53640131-53640283)
chr3 (1-148)||(39956632-39956779)
chr3 (1-126)||(19984610-19984734)
chr3 (2-154)||(51642594-51642747)
chr3 (2-154)||(9264252-9264404)
chr3 (36-154)||(35011857-35011975)
chr3 (6-148)||(37039947-37040088)
chr3 (37-154)||(39018785-39018901)
chr3 (36-141)||(39269506-39269610)
chr3 (80-151)||(40927026-40927097)
chr3 (1-134)||(27177425-27177558)
chr3 (36-154)||(50692519-50692637)
chr3 (1-154)||(37223568-37223721)
chr3 (2-154)||(22407607-22407759)
chr3 (82-154)||(26915109-26915181)
chr3 (81-140)||(40926710-40926769)
chr3 (22-154)||(42637723-42637858)
chr3 (36-154)||(9264079-9264197)
chr3 (84-154)||(25578722-25578791)
chr3 (43-153)||(49477528-49477638)
chr3 (36-154)||(50692316-50692434)
chr3 (2-154)||(39078730-39078882)
chr3 (36-138)||(4029637-4029739)
chr3 (36-154)||(22339734-22339852)
chr3 (31-109)||(33799157-33799235)
chr3 (36-154)||(35015478-35015596)
chr3 (84-154)||(50338423-50338493)
chr3 (80-154)||(51338478-51338552)
chr3 (80-154)||(54495524-54495598)
chr3 (4-109)||(19984375-19984479)
chr3 (1-154)||(40230597-40230750)
chr3 (8-56)||(33798999-33799047)
chr3 (80-148)||(34992576-34992644)
chr3 (80-148)||(34992868-34992936)
chr3 (84-147)||(32515948-32516011)
chr3 (12-75)||(32516167-32516229)
chr3 (23-122)||(39269070-39269168)
chr3 (36-141)||(11414370-11414474)
chr3 (22-148)||(19820507-19820632)
chr3 (36-154)||(40230428-40230545)
chr3 (80-138)||(44145158-44145216)
chr3 (36-126)||(50203850-50203940)
chr3 (48-137)||(29763701-29763790)
chr3 (80-140)||(19984205-19984265)
chr3 (36-152)||(53761391-53761507)
chr3 (4-67)||(25578892-25578955)
chr3 (111-154)||(26927105-26927148)
chr3 (2-125)||(49477349-49477472)
chr3 (43-138)||(54369048-54369143)
chr3 (36-138)||(4256243-4256345)
chr3 (4-66)||(12799758-12799820)
chr3 (1-66)||(33909790-33909856)
chr3 (80-154)||(39956504-39956578)
chr3 (36-138)||(43101364-43101466)
chr3 (80-126)||(44367799-44367845)
chr3 (20-138)||(44573648-44573766)
chr3 (80-154)||(47702461-47702535)
chr3 (36-126)||(51642421-51642511)
chr3 (4-109)||(12799908-12800013)
chr3 (1-62)||(20737105-20737166)
chr3 (37-154)||(42258903-42259020)
chr3 (20-69)||(50057237-50057286)
chr3 (20-69)||(50057367-50057416)
chr3 (154-194)||(19984475-19984515)
chr3 (43-138)||(24539162-24539258)
chr3 (154-198)||(25578754-25578798)
[»] chr7 (49 HSPs)
chr7 (1-154)||(33833943-33834095)
chr7 (4-150)||(7832924-7833070)
chr7 (1-154)||(10903443-10903595)
chr7 (36-154)||(31357667-31357786)
chr7 (3-154)||(38948374-38948524)
chr7 (36-154)||(5266352-5266470)
chr7 (2-154)||(13310384-13310536)
chr7 (79-154)||(10903313-10903388)
chr7 (80-154)||(33834148-33834222)
chr7 (36-154)||(33855684-33855802)
chr7 (1-138)||(8681893-8682030)
chr7 (2-154)||(9378786-9378938)
chr7 (36-154)||(22841045-22841164)
chr7 (36-154)||(29646057-29646174)
chr7 (1-154)||(16564887-16565040)
chr7 (1-154)||(16600622-16600775)
chr7 (2-154)||(23396602-23396754)
chr7 (1-148)||(29645814-29645960)
chr7 (43-154)||(35866639-35866750)
chr7 (1-154)||(4258162-4258315)
chr7 (1-154)||(24377803-24377955)
chr7 (2-154)||(39808555-39808708)
chr7 (91-154)||(23390583-23390646)
chr7 (36-154)||(6783031-6783149)
chr7 (36-154)||(16565091-16565209)
chr7 (36-154)||(16600453-16600571)
chr7 (7-154)||(33855474-33855625)
chr7 (80-150)||(30768415-30768485)
chr7 (4-61)||(5266195-5266252)
chr7 (1-126)||(31374786-31374911)
chr7 (80-148)||(49040565-49040633)
chr7 (1-56)||(258520-258575)
chr7 (80-154)||(2179647-2179722)
chr7 (43-154)||(48113990-48114101)
chr7 (36-138)||(1661184-1661286)
chr7 (80-154)||(6782819-6782893)
chr7 (36-153)||(6813071-6813188)
chr7 (1-154)||(6813241-6813394)
chr7 (80-154)||(9378993-9379067)
chr7 (36-138)||(23396823-23396925)
chr7 (80-154)||(29252569-29252643)
chr7 (24-134)||(29780160-29780270)
chr7 (2-138)||(40703818-40703954)
chr7 (7-99)||(42068419-42068511)
chr7 (4-154)||(6751671-6751820)
chr7 (7-70)||(43566040-43566103)
chr7 (80-126)||(2232117-2232163)
chr7 (36-154)||(4257993-4258111)
chr7 (47-137)||(47855995-47856085)
[»] chr1 (44 HSPs)
chr1 (1-147)||(6238296-6238441)
chr1 (1-154)||(38871113-38871266)
chr1 (1-154)||(47086226-47086388)
chr1 (2-154)||(29273184-29273336)
chr1 (1-154)||(803427-803578)
chr1 (1-154)||(21538892-21539045)
chr1 (36-154)||(25799113-25799232)
chr1 (80-148)||(22826782-22826850)
chr1 (2-154)||(39649043-39649195)
chr1 (36-154)||(15392018-15392136)
chr1 (36-126)||(40196835-40196924)
chr1 (2-147)||(43361716-43361861)
chr1 (1-61)||(7171615-7171675)
chr1 (80-154)||(5222687-5222761)
chr1 (1-154)||(9380893-9381046)
chr1 (20-122)||(40073083-40073184)
chr1 (2-135)||(15391831-15391964)
chr1 (37-141)||(7171743-7171846)
chr1 (2-66)||(29273025-29273089)
chr1 (31-154)||(47377828-47377953)
chr1 (36-154)||(38870942-38871061)
chr1 (83-154)||(40073500-40073571)
chr1 (36-154)||(52846842-52846960)
chr1 (2-66)||(12314452-12314516)
chr1 (2-154)||(21428226-21428378)
chr1 (1-125)||(29413164-29413287)
chr1 (36-115)||(6237962-6238040)
chr1 (36-154)||(22892681-22892799)
chr1 (36-147)||(43361545-43361656)
chr1 (80-154)||(39648915-39648988)
chr1 (1-43)||(40073360-40073402)
chr1 (80-154)||(45395545-45395619)
chr1 (1-66)||(26000136-26000200)
chr1 (1-65)||(9381181-9381245)
chr1 (60-135)||(10017345-10017420)
chr1 (43-154)||(29413341-29413452)
chr1 (91-150)||(42845069-42845128)
chr1 (97-147)||(6238143-6238193)
chr1 (84-154)||(11018847-11018917)
chr1 (4-66)||(25799265-25799327)
chr1 (36-154)||(48558314-48558432)
chr1 (20-137)||(20735532-20735649)
chr1 (82-154)||(21428097-21428169)
chr1 (154-194)||(47377825-47377865)
[»] chr6 (30 HSPs)
chr6 (30-154)||(26394544-26394667)
chr6 (2-154)||(16876969-16877121)
chr6 (7-154)||(26098335-26098482)
chr6 (7-154)||(25998810-25998957)
chr6 (7-154)||(26098541-26098688)
chr6 (1-154)||(24558576-24558729)
chr6 (1-154)||(11316836-11316989)
chr6 (36-154)||(25999016-25999134)
chr6 (36-154)||(28149786-28149904)
chr6 (36-154)||(26098747-26098865)
chr6 (6-99)||(5592622-5592714)
chr6 (36-154)||(15102617-15102736)
chr6 (36-154)||(15101104-15101222)
chr6 (36-154)||(16590177-16590295)
chr6 (36-154)||(16605085-16605203)
chr6 (1-154)||(21109930-21110083)
chr6 (1-138)||(19291876-19292013)
chr6 (3-63)||(18494441-18494501)
chr6 (20-154)||(11313359-11313493)
chr6 (1-66)||(12124855-12124920)
chr6 (1-138)||(30539244-30539381)
chr6 (36-154)||(24558781-24558899)
chr6 (4-66)||(30526919-30526981)
chr6 (1-66)||(19712567-19712632)
chr6 (95-154)||(2923008-2923067)
chr6 (2-37)||(11313548-11313583)
chr6 (36-138)||(12134476-12134578)
chr6 (157-194)||(2923033-2923070)
chr6 (36-124)||(10733431-10733519)
chr6 (1-65)||(21109787-21109851)
[»] chr5 (38 HSPs)
chr5 (5-154)||(13413577-13413725)
chr5 (2-154)||(38376724-38376876)
chr5 (2-154)||(43490422-43490574)
chr5 (2-149)||(40169000-40169147)
chr5 (2-154)||(48270-48420)
chr5 (1-154)||(36878319-36878472)
chr5 (4-154)||(2908730-2908880)
chr5 (21-154)||(3762899-3763032)
chr5 (2-154)||(18914327-18914479)
chr5 (2-154)||(20720509-20720661)
chr5 (23-154)||(28358015-28358146)
chr5 (36-154)||(4563685-4563802)
chr5 (2-148)||(34457095-34457241)
chr5 (38-154)||(48099-48215)
chr5 (1-153)||(3015579-3015731)
chr5 (80-155)||(18873231-18873306)
chr5 (80-154)||(10668353-10668427)
chr5 (30-154)||(21019858-21019981)
chr5 (1-154)||(39268011-39268168)
chr5 (79-154)||(29008065-29008140)
chr5 (1-135)||(36307881-36308014)
chr5 (84-154)||(43490297-43490367)
chr5 (38-147)||(35526983-35527092)
chr5 (2-154)||(24125055-24125207)
chr5 (47-153)||(30330643-30330749)
chr5 (36-138)||(38131773-38131875)
chr5 (2-154)||(28156029-28156175)
chr5 (45-154)||(39268219-39268328)
chr5 (2-66)||(35527137-35527201)
chr5 (80-147)||(17135519-17135586)
chr5 (43-154)||(18107826-18107937)
chr5 (43-154)||(37656732-37656843)
chr5 (43-154)||(37781844-37781955)
chr5 (80-154)||(2908599-2908673)
chr5 (154-192)||(4563765-4563803)
chr5 (6-154)||(15286846-15286995)
chr5 (38-154)||(35527269-35527386)
chr5 (98-154)||(18107533-18107589)
[»] scaffold0434 (2 HSPs)
scaffold0434 (2-154)||(13299-13451)
scaffold0434 (80-154)||(13506-13580)
[»] scaffold1138 (1 HSPs)
scaffold1138 (4-126)||(2040-2162)
[»] scaffold0989 (1 HSPs)
scaffold0989 (36-154)||(2940-3058)
[»] scaffold0029 (1 HSPs)
scaffold0029 (38-148)||(76851-76961)
[»] scaffold1112 (1 HSPs)
scaffold1112 (53-126)||(1245-1318)
[»] scaffold0339 (1 HSPs)
scaffold0339 (87-151)||(15696-15760)


Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 8056445 - 8056723
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8056445 tggcccttgaattcgacaggctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 8056544  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaatcttatctatccgacgtgagatatgagtttttcccaatacatccct- 199  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||| ||||     
T  8056545 aaacacttatcaagagtcttatctatctgatgtgggacatgtgttttttccaatcttatctatccgacgtgagatatgagtttttcgcattacacccctg 8056644  T
Q  200 -------agcactctttgggcttactctgaatattcatctttcttctctcaacgattcaaatacttcatctttcttcat 271  Q
           |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  8056645 tcacgccagcactctttgggcttactctgaatattcatctttcttctctcaccaattcaaatacttcatctttcttcat 8056723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 15968023 - 15968177
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||| |||| |||| ||||||  ||  ||||||||||||||| |||||    
T  15968023 tggcccttgaaatcgacaggctctgataccataatgaaattggcggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctttatat 15968121  T
Q  101 aaacacttaccaagagtcttatctatttgatgt--gggacatgtgtttttcccaat 154  Q
    |||| |||| ||||||||||||| || ||||||  |||||||| ||||||||||||    
T  15968122 aaactcttatcaagagtcttatcaatctgatgtgggggacatgggtttttcccaat 15968177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 15968387 - 15968539
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||  |||| ||||||||||   ||  ||||| |||||||||||| ||    
T  15968387 tggcccttgaaatcgacaggctctgataccatgatgaaattgggggcctaactcaacctta-aaaatcggtttataaggtgagggttgtctcctctaaat 15968485  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||| ||||||||| ||||||  |||||||||||||  |||||||||||    
T  15968486 aaactcttatcaagagtctaatctatacgatgtgggacatggatttttcccaat 15968539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 43599457 - 43599304
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||    
T  43599457 tggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttat 43599358  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  43599357 aaactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaat 43599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 25186666 - 25186549
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||| |||| ||||||  ||  ||||||||||||||||||||||||    
T  25186666 cccttgaattcgacaggctctgataccataatgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaa 25186568  T
Q  104 cacttaccaagagtcttat 122  Q
    |  |||| |||||||||||    
T  25186567 cttttacaaagagtcttat 25186549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 43901011 - 43901128
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||||| |||||||||||| |||| |||| ||||||  ||  ||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||    
T  43901011 gaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgg 43901109  T
Q  136 gacatgtgtttttcccaat 154  Q
    |||||| ||||||||||||    
T  43901110 gacatgggtttttcccaat 43901128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 10989200 - 10989352
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  10989200 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 10989299  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||| |||||  |||||||||| || |||||| |||||    
T  10989300 aactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaat 10989352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8559727 - 8559574
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| ||| |||||||||   | |||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||    
T  8559727 tggcccttgaattcgacaagctttgataccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttat 8559628  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    | || |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  8559627 atactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaat 8559574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 33435825 - 33435672
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| ||| |||||||||   |||||| |||| ||||||||| ||||||||| ||  |   ||  ||||||||||||||| |||||    
T  33435825 tggcccttgaattcgacaagctatgataccatgttgaaatttggggtctaactcatccttacaaaaccgacttgtaagatgaggattgtctcctttatat 33435726  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||| ||||||| ||||||||  |||||| ||| || ||||||||||||    
T  33435725 aaactcttatcaagagttttatctatccgatgtgagacttgagtttttcccaat 33435672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 15010988 - 15011140
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| ||||| |||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  15010988 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 15011087  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||| |||||  |||||||||| || |||||| |||||    
T  15011088 aactcttctcaagagtcttgtctatccgatgtgggacttgggttttttccaat 15011140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 3895276 - 3895131
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||| | |||| ||||||||||||||  |||||||| |||||||||||| |||  |||| | ||||  ||  ||||||||| |||||||||||    
T  3895276 tggcccttgaaatagacaggctctgataccatactgaaattggaggcctaactcatccttg-aaaaccagttcataaggtgaggattgcctcctctatat 3895178  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttt 147  Q
    |||| |||| ||||||||||||||||  ||| | ||||||| |||||    
T  3895177 aaactcttatcaagagtcttatctatccgatataggacatgagtttt 3895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 33435950 - 33435876
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||  |||||||||| || ||||||||||||    
T  33435950 tgaggattgtctcctttatataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 33435876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 20760653 - 20760771
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| |||||   ||  ||||||||| ||| ||| ||||||| |||  |||||||||| |||||  |||||||    
T  20760653 gaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaactcttctcaagagtcttgtctatccgatgtgg 20760752  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  20760753 gacttgggtttttcccaat 20760771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 8056274 - 8056343
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttc 149  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |  ||||||||||||| |||||||    
T  8056274 tgaggattgcctcctctatataaactcttatcaagagtcttatctttccgatgtgggacatgggtttttc 8056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 35561604 - 35561483
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaa-ttgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||||||||| |||||||||||||   |||| ||||||||||||||||| ||||||||| ||| |   ||  ||||||||  ||||||| |||    
T  35561604 ggcccttgaattcgacaagctctgataccatgttgaaatttgggggcctaactcatccttacaaaaccggcttacaaggtgaggattacctcctctttat 35561505  T
Q  101 aaacacttaccaagagtcttat 122  Q
    |||| |||  ||||||||||||    
T  35561504 aaactcttctcaagagtcttat 35561483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 10989027 - 10989145
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| ||||  ||||||||    
T  10989027 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctacctgatgtgg 10989126  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || |||||| |||||    
T  10989127 gacttgggttttttccaat 10989145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 18313851 - 18313777
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| |||||||||||||||  ||| ||||||||||||||||  |||||||||| ||  |||||||||||    
T  18313851 tgaggattgcctcctctatataaacttttaacaagagtcttatctatccgatgtgggacttggatttttcccaat 18313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 25186549 - 25186491
Alignment:
Q  7 ttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaa 65  Q
    ||||| |||||| |||||||||||| || ||||||||||||||||||||| ||||||||    
T  25186549 ttgaaatcgacaggctctgataccacaatgaaattgggggcctaactcatccttacaaa 25186491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 15968187 - 15968290
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||||||||||||  |||| |||| ||||||  ||  ||||| ||| ||||||||||||||| |||| ||| ||||| |||||| ||||||||||||||     
T  15968187 ggggcctaactcaacctta-aaaaccggttcataaggtgagggttgcctcctctatataaactcttatcaaaagtctaatctatctgatgtgggacatgg 15968285  T
Q  143 gtttt 147  Q
    |||||    
T  15968286 gtttt 15968290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 25186880 - 25186781
Alignment:
Q  38 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggga 137  Q
    |||||| |||||||||||  |||| |||| ||||||  ||  ||| |||||||||||||||||||||  ||| ||||||||||||||||  |||||||||    
T  25186880 aattggaggcctaactcaacctta-aaaaccggttcataagatgatgattgtctcctctatataaacttttatcaagagtcttatctatccgatgtggga 25186782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41456467 - 41456527
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattctta 61  Q
    ||||||||||||||||||  |||||||||||||| |||||||| ||| |||||||| ||||    
T  41456467 tggcccttgaattcgacagactctgataccataatgaaattggaggcataactcatcctta 41456527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 5720904 - 5720978
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| ||||||| |||  ||||||||||||||||  |||||||||| ||  |||||||||||    
T  5720904 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaat 5720978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 40902386 - 40902504
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| ||||||||||| || ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||    
T  40902386 gaaatttggggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgg 40902485  T
Q  136 gacatgtgtttttcccaat 154  Q
     || || ||||||||||||    
T  40902486 aacttgggtttttcccaat 40902504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 35561733 - 35561660
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaa 153  Q
    ||||||||| ||||||| ||||||| |||  ||||| ||||||||||  |||||||||| || |||||||||||    
T  35561733 tgaggattgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggacttgggtttttcccaa 35561660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 30066032 - 30065984
Alignment:
Q  106 cttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||||||||||||||| ||||||||||| || ||||||||||||    
T  30066032 cttatcaagagtcttatctatctgatgtgggacttgagtttttcccaat 30065984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 16051243 - 16051333
Alignment:
Q  31 ataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttat 122  Q
    |||| |||||||| |||||||||||| |||| |||| |  |||  ||  |||||| |||||||||||||||||| |||| ||||||||||||    
T  16051243 ataatgaaattggaggcctaactcatcctta-aaaaccaattcataaggtgaggagtgtctcctctatataaactcttatcaagagtcttat 16051333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 37537135 - 37537206
Alignment:
Q  83 ggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||||| || | || |||  ||| ||||||||||||| |||||||||| || ||||||||||||    
T  37537135 ggattgtctcctctttacatactcttctcaaaagtcttatctattcgatgtgggacttgagtttttcccaat 37537206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 42228875 - 42228764
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||| ||||||||| ||||||||||||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||||| |      
T  42228875 ggggtctaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttag 42228776  T
Q  143 gtttttcccaat 154  Q
     |||||||||||    
T  42228775 atttttcccaat 42228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 42447322 - 42447255
Alignment:
Q  87 tgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||| || ||||  ||| |||||||| ||||||||||||||||||| || |||||| |||||    
T  42447322 tgtctcctctttagaaactattatcaagagtcgtatctatttgatgtgggacttgagttttttccaat 42447255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 3183888 - 3183994
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtct 119  Q
    |||||||||||||   |||||| ||||||||||||||  |||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  ||||||||     
T  3183888 gctctgataccatgttgaaatttggggcctaactcatcgttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcc 3183987  T
Q  120 tatctat 126  Q
    |||||||    
T  3183988 tatctat 3183994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 3895477 - 3895400
Alignment:
Q  48 ctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctat 126  Q
    ||||||||| |||| |||||||||||  ||  ||||||||| || |||||||||||  |||| ||||||||||||||||    
T  3895477 ctaactcatcctta-aaaatcggttcataaggtgaggattgccttctctatataaattcttatcaagagtcttatctat 3895400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 7729798 - 7729752
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    |||||||||||||  ||||||| |||||||||||||| |||||||||    
T  7729798 gctctgataccatgtagaaatttggggcctaactcatccttacaaaa 7729752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 34248471 - 34248381
Alignment:
Q  35 agaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatcta 125  Q
    ||||||| |||||||||||||| ||||||||| ||| |   ||  |||||| || ||||||| ||||||| |||| |||||||| ||||||    
T  34248471 agaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatcta 34248381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 41456316 - 41456416
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||||| |||||||||||| |||| |||| ||||||   |  ||||||||||||||||||||||||| |||| || ||   ||||||||  |||||||    
T  41456316 gaaattggaggcctaactcatcctta-aaaaccggttcatcaggtgaggattgtctcctctatataaactcttatcagga---ttatctatccgatgtgg 41456411  T
Q  136 gacat 140  Q
    |||||    
T  41456412 gacat 41456416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 45122377 - 45122304
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||| ||| |||| || |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  45122377 tgaggattgtctc-tctttatatactcttctcaagagtcttatctatcagatgtgggacttgggtttttcccaat 45122304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 7622021 - 7621973
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatc 68  Q
    |||||||||||||   |||||| |||||||||||||| |||||||||||    
T  7622021 gctctgataccatgttgaaatttggggcctaactcatccttacaaaatc 7621973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 22188828 - 22188776
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcat 56  Q
    |||||||| ||||||  |||||||||||||| |||||||  ||||||||||||    
T  22188828 cccttgaaatcgacagactctgataccataatgaaattgaaggcctaactcat 22188776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 34248186 - 34248086
Alignment:
Q  38 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggga 137  Q
    |||| |||||||||||||| ||||||||| ||| |   ||  |||||| || ||||||| ||||||| |||| |||||||| ||||||   |||||||||    
T  34248186 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtggga 34248087  T
Q  138 c 138  Q
    |    
T  34248086 c 34248086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36039950 - 36039982
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccata 33  Q
    |||||||||||||||||| ||||||||||||||    
T  36039950 tggcccttgaattcgacaagctctgataccata 36039982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 39386815 - 39386663
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    |||||||||||| |||| ||||||||||||||| |||||||| |||||||||||| ||||||||| | ||||  ||  ||||||||| ||||||||||||    
T  39386815 ggcccttgaatttgacaggctctgataccataatgaaattggaggcctaactcatccttacaaaaccagttcataaggtgaggattgcctcctctatata 39386716  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||| ||||||||||||||||  ||||||||||||| ||||||||||||    
T  39386715 aactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaat 39386663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 29676412 - 29676287
Alignment:
Q  29 ccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctattt 128  Q
    |||||| |||||||| || |||||| |  ||||||||| ||||||| ||  ||||||||| ||||| ||||||||| |||| ||||||||||||||||      
T  29676412 ccataatgaaattggaggtctaacttaaccttacaaaaccggttcttaaggtgaggattgactcctatatataaactcttatcaagagtcttatctatcc 29676313  T
Q  129 gatgtgggacatgtgtttttcccaat 154  Q
    |||||| |||||||||||||||||||    
T  29676312 gatgtgagacatgtgtttttcccaat 29676287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 3435445 - 3435581
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   | |||| |||||||||||||| ||||||||| |||||   ||  ||||||||| ||||||| ||||    
T  3435445 ggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctgtata 3435544  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggac 138  Q
    ||| |||  ||||||||||||||||  ||||||||||    
T  3435545 aactcttctcaagagtcttatctatccgatgtgggac 3435581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 12432043 - 12431891
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    |||||||||||| |||| ||| |||||||||   |||||| |||||||| ||||| ||||||||| ||| |   ||  ||||||||||||||||| ||||    
T  12432043 ggcccttgaatttgacaagctttgataccatgttgaaatttggggcctagctcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttata 12431944  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  12431943 aactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaat 12431891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 32667294 - 32667176
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  | ||||||| ||||||||||||||| |||| |||||||||||||||| ||||||||    
T  32667294 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggattgcctcctctatataaactcttatcaagagtcttatctatctgatgtgg 32667195  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| |  ||||||||||||    
T  32667194 gacttcggtttttcccaat 32667176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 20998982 - 20999100
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||    
T  20998982 gaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgg 20999081  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  20999082 gacttgggtttttcccaat 20999100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 39108231 - 39108081
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    ||||||||||||||| |||||||||||||   |||| | | ||||| |||||| ||||||||||||| |   ||  ||| ||||  ||||||||||||||    
T  39108231 cccttgaattcgacaagctctgataccatgttgaaacttgaggcctgactcatccttacaaaatcggattgtaaggtgatgattacctcctctatataaa 39108132  T
Q  104 cacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    | |||| ||||| |||||| ||| ||||||||||| ||  |||||||||||    
T  39108131 ctcttatcaagattcttatatatctgatgtgggacttgaatttttcccaat 39108081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 883595 - 883712
Alignment:
Q  37 aaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggg 136  Q
    ||||||||||| |||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  ||||||||||||||||  ||||||||    
T  883595 aaattgggggcataactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtggg 883694  T
Q  137 acatgtgtttttcccaat 154  Q
    || || ||||||||||||    
T  883695 acttgggtttttcccaat 883712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 29684153 - 29684004
Alignment:
Q  5 ccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaac 104  Q
    |||||||||||||| ||||||||||||||  |||||| |||  |||||| || ||||||||| ||| |   ||  ||||||||| ||||||| |||| ||    
T  29684153 ccttgaattcgacaagctctgataccatattgaaatttgggttctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatac 29684054  T
Q  105 acttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     |||  |||||||||| ||||| ||||| ||||| || ||||||||||||    
T  29684053 tcttctcaagagtcttgtctatctgatgcgggacttgggtttttcccaat 29684004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 17264963 - 17265079
Alignment:
Q  31 ataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttga 130  Q
    |||| |||||||  |||||||||||| |||| ||||  |||||   |  ||||||||| |||||||||||||||  ||||||||||||||||||||  ||    
T  17264963 ataatgaaattgaaggcctaactcatccttaaaaaactggttcatcaggtgaggattgcctcctctatataaacttttaccaagagtcttatctatccga 17265062  T
Q  131 tgtgggacatgtgtttt 147  Q
    ||||||||||| |||||    
T  17265063 tgtgggacatgggtttt 17265079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 17265308 - 17265216
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctattt 128  Q
    ||||||||||| || |||||| |||| |||||||||||   |  |||||||||  |||||||||||||| |||||||||||||||||||||||    
T  17265308 gaaattgggggtctgactcatccttaaaaaatcggttcatcaggtgaggattgcatcctctatataaactcttaccaagagtcttatctattt 17265216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 33985934 - 33986086
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||  |||||| ||||| | ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  33985934 ggcccttgaattcgacaagctctgataccatgttgaaatctggggcccaactcttccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 33986033  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     || |||  ||||||||||||||||  |||||||||  || ||||||||||||    
T  33986034 tactcttctcaagagtcttatctatccgatgtgggagttgggtttttcccaat 33986086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 4721799 - 4721911
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| | |||||||||||| ||||  |||| |||||  || |||| ||||| ||||||||||||||| |||| ||||||||| ||||||  |||||||    
T  4721799 gaaatttgaggcctaactcatcctta--aaattggttcataagttgatgattgcctcctctatataaactcttatcaagagtctaatctatccgatgtgg 4721896  T
Q  136 gacatgtgtttttcc 150  Q
    |||||| ||||||||    
T  4721897 gacatgggtttttcc 4721911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 32667124 - 32666970
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccat-aaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctata 99  Q
    |||||||||||||||||| |||||||||||||   ||| ||| ||||||||||||||  |||||||| ||| |   ||  | || |||| ||||||||||    
T  32667124 tggcccttgaattcgacaagctctgataccatgttagacatttggggcctaactcatcattacaaaaccggcttgtaaggtaagaattgcctcctctata 32667025  T
Q  100 taaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||| |||| |||||||||||| |||   ||| ||||| || ||||||||||||    
T  32667024 taaactcttatcaagagtcttatttatccaatgagggacttgggtttttcccaat 32666970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 34775468 - 34775350
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||  |||  |||||||||| |||||  |||||||    
T  34775468 gaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgatgtgg 34775369  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  34775368 gacttgggtttttcccaat 34775350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 36264138 - 36264065
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||  ||||||||||||| |||||| |||||    
T  36264138 tgaggattgcctcctctatataaacacttatcaagagttttatctatccgatgtgggacatg-gtttttaccaat 36264065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 17727514 - 17727397
Alignment:
Q  37 aaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggg 136  Q
    ||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| || |||| ||||||| |||  ||||||||||||||||  ||||||||    
T  17727514 aaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtggg 17727415  T
Q  137 acatgtgtttttcccaat 154  Q
    || || ||||||||||||    
T  17727414 acttgggtttttcccaat 17727397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 31761278 - 31761125
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||| |||||||||||| ||||||| |||||   |||||| |||||||||||||| ||||||||| |   |   ||  ||||||||| ||| |||||||    
T  31761278 tggccattgaattcgacaagctctgaaaccatgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcttctatat 31761179  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||  ||| ||||||||||||  |||||||||| |  ||||||||||||    
T  31761178 aaactcttctcaaaagtcttatctatccgatgtgggacttaggtttttcccaat 31761125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 36264190 - 36264239
Alignment:
Q  79 ttgaggattgtctcctctatataaacacttaccaagagtcttatctattt 128  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36264190 ttgaggattgtcacctctatataaacacttatcaagagtcttatctattt 36264239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 883995 - 883847
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| ||| |||||||||    |||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| |||  || ||||    
T  883995 ggcccttgaattcgacaagctttgataccatgttaaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctctcctttata 883896  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcc 150  Q
    ||| |||  |||||||||| |||||  ||| |||||| || ||||||||    
T  883895 aactcttctcaagagtcttgtctatccgatatgggacttgggtttttcc 883847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 8044538 - 8044657
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctat-ataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||| ||| |||||||||| |||||||||  |||||  ||  |||||| || ||||||| | |||||| |||| |||||||||||||||| ||||| |    
T  8044538 gaaatttgggacctaactcatccttacaaaactggttcataaggtgaggagtgcctcctcttttataaactcttatcaagagtcttatctatctgatgcg 8044637  T
Q  135 ggacatgtgtttttcccaat 154  Q
    |||| || ||||||||||||    
T  8044638 ggacttgggtttttcccaat 8044657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 10485309 - 10485219
Alignment:
Q  31 ataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttat 122  Q
    |||| |||||||| |||||||||||| |||| |||| ||||||  ||  ||||||||||||||||||||||||| || | ||||||||||||    
T  10485309 ataatgaaattggaggcctaactcatcctta-aaaaccggttcgtaaggtgaggattgtctcctctatataaactctcatcaagagtcttat 10485219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 25621278 - 25621396
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||||||||| ||||||||| ||| |   ||  ||||| |||| |||||| |||| || |||  ||||||||||||||||  ||||||     
T  25621278 gaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgagggttgtttcctctttatatactcttctcaagagtcttatctatccgatgtga 25621377  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  25621378 gacttgggtttttcccaat 25621396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 27545121 - 27545227
Alignment:
Q  48 ctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttt 147  Q
    ||||||||| ||||||||| |||||   ||  ||||||||| ||||||| ||||||| |||  ||||||||||||||||  |||||||||||||  ||||    
T  27545121 ctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacatggatttt 27545220  T
Q  148 tcccaat 154  Q
    | |||||    
T  27545221 ttccaat 27545227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 31761442 - 31761340
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| ||||| |||||||| ||||||||||||| |   ||  ||||||||| ||||||||||||||| ||||  ||||||||||||||   |||||||    
T  31761442 gaaatttggggcttaactcatccttacaaaatcggcttgtaaggtgaggattgcctcctctatataaactcttattaagagtcttatctacccgatgtgg 31761343  T
Q  136 gac 138  Q
    |||    
T  31761342 gac 31761340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 7257096 - 7257161
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcct-aactcattcttacaaaa 66  Q
    ||||||||||||||||| |||||||||||||   |||||||||||||| ||||||| |||||||||    
T  7257096 ggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaaactcatccttacaaaa 7257161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 29676217 - 29676145
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||||||||||||||||  ||| |  || ||||||||||| ||||||||| ||| ||||||||||||    
T  29676217 tgaggattgtctcctctatataaacttttatc--gaatcttatctattcgatgtgggatatgggtttttcccaat 29676145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 884164 - 884050
Alignment:
Q  40 ttgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggaca 139  Q
    ||||||||||||||||  ||||||||| ||| |   ||  ||||||||| ||||||| |||| || |||  ||||||||| ||||||  ||||||||||     
T  884164 ttgggggcctaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcatctatccgatgtgggact 884065  T
Q  140 tgtgtttttcccaat 154  Q
    || ||||||||||||    
T  884064 tgggtttttcccaat 884050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 6986453 - 6986527
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| ||||||| |||  ||||||||||||||||  |||||||||| ||  |||||||||||    
T  6986453 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaat 6986527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 19860144 - 19860030
Alignment:
Q  40 ttgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggaca 139  Q
    |||||||||||| |||| ||||||||| ||| |   ||  || |||||| ||||||| ||||||| |||  |||||||||| |||||  ||||||||||     
T  19860144 ttgggggcctaaatcatccttacaaaaccggcttgtaaggtgtggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 19860045  T
Q  140 tgtgtttttcccaat 154  Q
    || ||||||||||||    
T  19860044 tgggtttttcccaat 19860030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 29695376 - 29695450
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||| |||| ||||||| |||  ||||||||||||||||  |||||| ||| || ||||||||||||    
T  29695376 tgaggattgtctactctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaat 29695450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 7257566 - 7257631
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcct-aactcattcttacaaaa 66  Q
    |||||||||||||||||  ||||||||||||   |||||||||||||| ||||||| |||||||||    
T  7257566 ggcccttgaattcgacaaactctgataccatgttgaaattgggggcctaaactcatccttacaaaa 7257631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 12419896 - 12419831
Alignment:
Q  89 tctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||| ||||||| |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  12419896 tctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaat 12419831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 39108459 - 39108394
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacactt 108  Q
    |||| ||||||||| ||||||||| |||||   ||  |||||||||||||||||||||||||||||    
T  39108459 ggggtctaactcatccttacaaaaccggtttataaggtgaggattgtctcctctatataaacactt 39108394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 12343685 - 12343641
Alignment:
Q  110 ccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||    
T  12343685 ccaaaagtcttatctatcagatgtgggacatgtgtttttcccaat 12343641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 10570971 - 10570928
Alignment:
Q  111 caagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||||||| ||||||||||| || ||||||||||||    
T  10570971 caagagtcttatctatctgatgtgggacttgggtttttcccaat 10570928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 17727343 - 17727308
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaag 36  Q
    |||||||||||||||||| |||||||||||||||||    
T  17727343 tggcccttgaattcgacaagctctgataccataaag 17727308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 19859989 - 19859918
Alignment:
Q  83 ggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  19859989 ggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 19859918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 33985764 - 33985880
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||  | |||  ||||||||||||||||  |||||||    
T  33985764 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata--ctcttctcaagagtcttatctatccgatgtgg 33985861  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || |||||| |||||    
T  33985862 gacttgggtttttgccaat 33985880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 3976980 - 3977098
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtct 119  Q
    |||||||||||||   | |||| |||||||||||||| ||||||||| ||| |   || ||||||| || ||||||| ||||||| |||  |||||||      
T  3976980 gctctgataccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtac 3977079  T
Q  120 tatctatttgatgtgggac 138  Q
    |||||||  ||||||||||    
T  3977080 tatctatccgatgtgggac 3977098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8044753 - 8044795
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgg 43  Q
    ||||||||||||||||||  |||||||||||||| ||||||||    
T  8044753 tggcccttgaattcgacaaactctgataccataatgaaattgg 8044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 10542100 - 10542174
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||| |||||||||| ||||||| |||| |||||||   |||||| | ||||||||| || ||||||||||||    
T  10542100 tgaggagtgtctcctctttataaactcttatcaagagttcaatctatctaatgtgggacttgagtttttcccaat 10542174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 29695505 - 29695563
Alignment:
Q  3 gcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattctta 61  Q
    |||||||||||||||| |||||||||||||    ||||| |||||||||||||| ||||    
T  29695505 gcccttgaattcgacaagctctgataccatgttaaaatttggggcctaactcatcctta 29695563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 43195895 - 43195793
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  |||||| || ||||||| ||||||| |||  |||||||  ||||||| ||||||||    
T  43195895 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctatctgatgtgg 43195796  T
Q  136 gac 138  Q
    |||    
T  43195795 gac 43195793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 32975318 - 32975257
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatg 141  Q
    |||||||||| |||||| ||||||  |||  |||||||||||||||||  ||||||||||||    
T  32975318 tgaggattgtttcctctttataaattcttctcaagagtcttatctattcaatgtgggacatg 32975257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 29676324 - 29676284
Alignment:
Q  154 tcttatctatccgacgtgagatatgagtttttcccaataca 194  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  29676324 tcttatctatccgatgtgagacatgtgtttttcccaataca 29676284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 34622209 - 34622253
Alignment:
Q  216 actctgaatattcatctttcttctctcaacgattcaaatacttca 260  Q
    ||||||||||||||||| | |||||||| ||||||||| ||||||    
T  34622209 actctgaatattcatctatattctctcaccgattcaaaaacttca 34622253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 14945037 - 14944887
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| |||| ||||||||| ||||||  ||  ||||||| | ||||||||| ||||    
T  14945037 cccttgaattcgacatgctctgataccataatgaaattgggggcataattcatccttacaaaaacggttcataaggtgaggatcgcctcctctatgtaaa 14944938  T
Q  104 cacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    | ||||||||||||||||||||| |||||||| ||||| ||||||| ||||    
T  14944937 ctcttaccaagagtcttatctatctgatgtggaacatgagtttttctcaat 14944887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 3640352 - 3640199
Alignment:
Q  1 tggcccttgaattcgacatg-ctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctata 99  Q
    |||||||||||||||||| | |||||||||||||| |||||| | |||||||||||| |||| |||| ||||||  ||| ||||||||||||||||||||    
T  3640352 tggcccttgaattcgacaaggctctgataccataatgaaattagaggcctaactcatcctta-aaaaccggttcataaagtgaggattgtctcctctata 3640254  T
Q  100 taaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||| |||| ||||||||||||||||  || |||||||||| ||||||||||||    
T  3640253 taaactcttatcaagagtcttatctatccgacgtgggacatgagtttttcccaat 3640199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 47491805 - 47491957
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||| |||||| |||||||||| |||| |||||||| |||||||||||| |||| |||| | ||||| || |||||||||| ||||| |||||    
T  47491805 tggcccttgaaatcgacaggctctgatactataatgaaattggaggcctaactcatcctta-aaaaccagttcttaagttgaggattgcctcctttatat 47491903  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| | || ||||||||||||||||  ||||||||||||| ||||||||||||    
T  47491904 aaactcctatcaagagtcttatctatccgatgtgggacatgggtttttcccaat 47491957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 56511441 - 56511290
Alignment:
Q  3 gcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataa 102  Q
    |||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||||||  ||  |||||| || ||||||| |||||    
T  56511441 gcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataa 56511342  T
Q  103 acacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    || |||| ||||||||||||||| |  ||||||||| || ||||||||||||    
T  56511341 actcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaat 56511290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 45684348 - 45684487
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||| |||| ||||  |||||  ||  ||||||||| |||||| ||||    
T  45684348 tggcccttgaaatcgacacgctctgataccataatgaaattggaggcctaactcatcctta-aaaactggttcataaggtgaggattgcctcctccatat 45684446  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatg 141  Q
    || | |||||||||||||||||||||  |||||||||||||    
T  45684447 aagctcttaccaagagtcttatctatccgatgtgggacatg 45684487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 12016853 - 12017002
Alignment:
Q  5 ccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaac 104  Q
    |||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||||||    
T  12016853 ccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaac 12016952  T
Q  105 acttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     |||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  12016953 tcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 12017002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 8304949 - 8305066
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||||| ||||| ||||||||||| |||||||||||  ||  ||||||||||||||||||||||||| |||| ||| ||||||||||||  ||||| |    
T  8304949 gaaattggaggcctgactcattctta-aaaatcggttcataaggtgaggattgtctcctctatataaactcttatcaaaagtcttatctatccgatgtag 8305047  T
Q  136 gacatgtgtttttcccaat 154  Q
    |||||| ||||||||||||    
T  8305048 gacatgagtttttcccaat 8305066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 14945254 - 14945136
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||||| || ||||||||| ||||||||| ||||||  ||  |||||||||  |||||||||||||| ||| | |||||||||||||||  |||||||    
T  14945254 gaaattggaggtctaactcatccttacaaaaccggttcataaggtgaggattgcatcctctatataaactctttcgaagagtcttatctatccgatgtgg 14945155  T
Q  136 gacatgtgtttttcccaat 154  Q
    |||||||||||||||||||    
T  14945154 gacatgtgtttttcccaat 14945136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 28245934 - 28245784
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||    
T  28245934 tggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaaccggcttgcaaggtgaggattgcctcctctttat 28245835  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| ||   || |||||| ||||||  |||||||||| || ||||||||||||    
T  28245834 aaactct---catgagtctcatctatccgatgtgggacttgggtttttcccaat 28245784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 56511615 - 56511497
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||||||||||  ||  |||||| || ||||||| ||||||| |||| ||||||||||||||| |  ||||||    
T  56511615 gaaatttggggcctaactcatccttacaaaatcggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaatgtgg 56511516  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  56511515 gacttgggtttttcccaat 56511497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 3640568 - 3640449
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatc-ggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||||| |||||||||||| |||| |||| | ||||| |||  ||||||||| ||||||||| ||||| |||| ||||||||||||||||  ||||||    
T  3640568 gaaattggaggcctaactcatccttaaaaaaaccggttcagaaggtgaggattgcctcctctatttaaactcttatcaagagtcttatctatccgatgtg 3640469  T
Q  135 ggacatgtgtttttcccaat 154  Q
    ||| ||| ||||||||||||    
T  3640468 ggagatgagtttttcccaat 3640449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 14115707 - 14115828
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    |||||||| |||||| ||||||||||||||| |||||||| |||| ||||||| |||| |||| ||||||  ||  |||||||||  |||||||||||||    
T  14115707 cccttgaaatcgacaggctctgataccataatgaaattggaggcccaactcatcctta-aaaaccggttcataaggtgaggattgcatcctctatataaa 14115805  T
Q  104 cacttaccaagagtcttatctat 126  Q
    | |||| |||| |||||||||||    
T  14115806 ctcttatcaagtgtcttatctat 14115828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 29113560 - 29113442
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| | | |   ||  ||||||||| ||||||| ||||||| |||  |||||||||||||||| ||||||||    
T  29113560 gaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgg 29113461  T
Q  136 gacatgtgtttttcccaat 154  Q
    |||||| ||||||||||||    
T  29113460 gacatgggtttttcccaat 29113442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 43943784 - 43943666
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  ||||||||||||||||  |||||||    
T  43943784 gaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgg 43943685  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  43943684 gacttgggtttttcccaat 43943666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 17077102 - 17077255
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| |||||||||||||  ||||||||| ||| |   ||  ||||| ||| ||||||| |||    
T  17077102 tggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaaggtgagggttgcctcctctttat 17077201  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     ||| || | ||||||||| ||||||  |||||||||| || ||||||||||||    
T  17077202 gaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaat 17077255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 10390435 - 10390558
Alignment:
Q  3 gcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataa 102  Q
    |||||||||||||||| |||||||||||||   |||||| |||| ||||||||| |||||||||  |||||  ||  |||||| |||||||||| |||||    
T  10390435 gcccttgaattcgacaagctctgataccatgttgaaatttggggtctaactcatccttacaaaactggttcataaggtgaggaatgtctcctctttataa 10390534  T
Q  103 acacttaccaagagtcttatctat 126  Q
    ||  ||| |||||| |||||||||    
T  10390535 actattatcaagagacttatctat 10390558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 39110861 - 39110710
Alignment:
Q  3 gcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataa 102  Q
    |||||||||||||||| ||||||||||||||  ||| |||| ||||||||||| |||||||||||||| |   ||  ||||||||| ||||||| || |     
T  39110861 gcccttgaattcgacaagctctgataccatactgaatttggaggcctaactcaatcttacaaaatcggcttgtaaggtgaggattgcctcctctttacat 39110762  T
Q  103 acacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    || |||  ||||| ||||||||||  |||||| ||| || |||||| |||||    
T  39110761 actcttctcaagattcttatctatccgatgtgagacttgagttttttccaat 39110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 12016676 - 12016794
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||    
T  12016676 gaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgg 12016775  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  12016776 gacttgggtttttcccaat 12016794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 5488512 - 5488360
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    |||||| ||| |||||| ||||||||| |||   |||||| | |||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  5488512 ggccctagaactcgacaagctctgatatcatgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 5488413  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||||| |||  |||||||||| || ||||||||||||    
T  5488412 aactcttctcaagagtcttatttatccgatgtgggacttgggtttttcccaat 5488360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 8559964 - 8560066
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||| |||| ||||||||| ||||||||| ||| |||| ||| ||||||||| |||||| |||||||| |||| ||||||||||||||||  ||||||    
T  8559964 gaaatttggggtctaactcatccttacaaaaccggcttct-aaagtgaggattgcctcctcgatataaactcttatcaagagtcttatctatccgatgtg 8560062  T
Q  135 ggac 138  Q
    ||||    
T  8560063 ggac 8560066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 41743651 - 41743557
Alignment:
Q  31 ataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctat 126  Q
    |||| |||||||| |||||||||||| |||| |||| ||||||  ||  ||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  41743651 ataatgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatctat 41743557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 25753598 - 25753716
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| ||| |||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||| |||||||||| |||||  |||||||    
T  25753598 gaaatttgggacctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgg 25753697  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  25753698 gacttgggtttttcccaat 25753716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 45684211 - 45684285
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||| ||||||||||||  ||| |||||||| |||||||  ||||||||||||| ||||||||||||    
T  45684211 tgaggattgtcttctctatataaacttttatcaagagtcgtatctatccgatgtgggacatgggtttttcccaat 45684285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 14115485 - 14115596
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||||| |||||||||||| |||| ||||  |||||  ||  | ||||||||||||||||||||||| |||| ||||||||||||||||  ||| ||     
T  14115485 gaaattggaggcctaactcatcctta-aaaacaggttcataaggtaaggattgtctcctctatataaactcttatcaagagtcttatctatccgatatga 14115583  T
Q  136 gacatgtgttttt 148  Q
    ||||||| |||||    
T  14115584 gacatgttttttt 14115596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 1923039 - 1923102
Alignment:
Q  91 tcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||| ||||||| |||  |||||||||||||||| |||||||||||||| ||||||||||||    
T  1923039 tcctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaat 1923102  T

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Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 28246097 - 28245986
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||||||||||||| ||||||||| |||||   ||  ||||||||| || |||| ||||||| || | ||||||||| ||||||  |||||||||| ||     
T  28246097 ggggcctaactcatccttacaaaaccggtttgcaaggtgaggattgccttctctttataaactctcatcaagagtctcatctatccgatgtgggacttgg 28245998  T
Q  143 gtttttcccaat 154  Q
    ||||||||||||    
T  28245997 gtttttcccaat 28245986  T

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Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 7892689 - 7892747
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggac 138  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||  ||||||||||    
T  7892689 tgaggattgtctcctctatataaactcatatcaagagtcttatctatccgatgtgggac 7892747  T

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Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 27634303 - 27634437
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtct 119  Q
    |||||||||||||   | |||| |||||||||||||| ||||||||||||| |   ||  |||| |||| ||||||| |||| || |||  |||||||||    
T  27634303 gctctgataccatgttgtaatttggggcctaactcatccttacaaaatcggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtct 27634402  T
Q  120 tatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||  |||||||||| |  ||||||||||||    
T  27634403 tatctatccgatgtgggactttggtttttcccaat 27634437  T

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Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 39110973 - 39110900
Alignment:
Q  81 gaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||||||| |||| || |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  39110973 gaggattgtctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaat 39110900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 9758365 - 9758297
Alignment:
Q  86 ttgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||||| |||| ||||||||||||||||  ||||||||| |||   ||||||||||    
T  9758365 ttgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggatatgaacttttcccaat 9758297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 28497261 - 28497325
Alignment:
Q  90 ctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||| ||||||| |||| ||||||||||||||||  |||||||||| || ||||||||||||    
T  28497261 ctcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 28497325  T

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Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 35399375 - 35399439
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||  |||||||||    
T  35399375 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcaaccttacaaaa 35399439  T

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Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1923154 - 1923217
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaa 64  Q
    ||||||||||||| |||| |||||||||||||   |||||| |||||||||||||| |||||||    
T  1923154 tggcccttgaattggacaagctctgataccatgttgaaatttggggcctaactcatccttacaa 1923217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29113390 - 29113335
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcat 56  Q
    |||||||||||||||||| | |||||||||||  ||||||| ||||||||||||||    
T  29113390 tggcccttgaattcgacaagttctgataccatgtagaaatttggggcctaactcat 29113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 17076933 - 17077051
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||  ||||||||| ||| |   ||| ||||| ||| ||||||| ||| ||| || | ||||||||| ||||||  |||||||    
T  17076933 gaaatttggggcctaactcaaccttacaaaaccggcttgcaaagtgagggttgcctcctctttatgaactctcatcaagagtctcatctatccgatgtgg 17077032  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  17077033 gacttgggtttttcccaat 17077051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 23350866 - 23350792
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||| |||| || |||| |||||||||||| |||  |||||||||  || ||||||||||||    
T  23350866 tgaggattgtctcctctttatatactcttatcaagagtcttatttatccgatgtgggatttgggtttttcccaat 23350792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 28395288 - 28395171
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||| || ||| | |||||||||||||||   ||||||    
T  28395288 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactctttc-aagagtcttatctatccaatgtgg 28395190  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  28395189 gacttgggtttttcccaat 28395171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 53864004 - 53863898
Alignment:
Q  48 ctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttt 147  Q
    ||||||||| ||||||||| ||||||  ||  |||||| |||||||||| |||||||  ||| ||| ||||||||||||  ||||| |||| || |||||    
T  53864004 ctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcaaaagtcttatctatccgatgttggacttgggtttt 53863905  T
Q  148 tcccaat 154  Q
    || ||||    
T  53863904 tctcaat 53863898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 27634490 - 27634554
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    ||||||||||||||||| |||||||||||||   | |||| ||||||||||||||  ||||||||    
T  27634490 ggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatcgttacaaaa 27634554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 49380840 - 49380991
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||| ||||||||| |||||||||||||   |||||||| | ||||||| ||  | |||||| ||| |   ||  ||||||||| ||||||| ||||    
T  49380840 ggcccttaaattcgacaagctctgataccatgttgaaattggag-cctaacttatcatcacaaaaccggcttgtaaggtgaggattgcctcctctttata 49380938  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  ||||||||||||||||  |||||| ||| ||  |||||||||||    
T  49380939 aactcttctcaagagtcttatctatccgatgtgagacttggatttttcccaat 49380991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 54210486 - 54210370
Alignment:
Q  38 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggga 137  Q
    |||| |||||||||||||| ||||||||| ||| |   || ||||| |||  ||||||| |||| || |||  |||||||||| |||||  |||||||||    
T  54210486 aatttggggcctaactcatccttacaaaaccggcttgtaatttgagaattacctcctctttatatactcttctcaagagtcttgtctatccgatgtggga 54210387  T
Q  138 catgtgtttttcccaat 154  Q
    | || ||||||||||||    
T  54210386 cttgggtttttcccaat 54210370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 3640236 - 3640197
Alignment:
Q  154 tcttatctatccgacgtgagatatgagtttttcccaatac 193  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  3640236 tcttatctatccgacgtgggacatgagtttttcccaatac 3640197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 15665264 - 15665162
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| | |||||||||||| ||||||||| ||| |   ||  |||||| || ||||||||||||||| |||  |||||||| |||||||  |||||||    
T  15665264 gaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagtcctatctatccgatgtgg 15665165  T
Q  136 gac 138  Q
    |||    
T  15665164 gac 15665162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 52214726 - 52214637
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatcta 125  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  |||||| || ||||||| ||||||| |||| ||||||| |||||||    
T  52214726 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtattatcta 52214637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 3640486 - 3640446
Alignment:
Q  154 tcttatctatccgacgtgagatatgagtttttcccaataca 194  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  3640486 tcttatctatccgatgtgggagatgagtttttcccaataca 3640446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 40926596 - 40926447
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    |||||||| |||||| ||||| ||||||||| |||||||| |||||||||||| |||| |||| ||||||| ||   |||||||||||||||||||||||    
T  40926596 cccttgaaatcgacaggctctaataccataatgaaattggaggcctaactcatcctta-aaaaccggttcttaaggagaggattgtctcctctatataaa 40926498  T
Q  104 cacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    | |||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  40926497 ctcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaat 40926447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 26927049 - 26926904
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    ||||||||| ||||| ||||||||||||||| |||||||| |||||||||||| |||| |||| ||||||  ||  ||||||||||||||||||||||||    
T  26927049 cccttgaatccgacaggctctgataccataatgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaa 26926951  T
Q  104 cacttaccaagagtcttatctatttgatgtgggacatgtgtttttcc 150  Q
    | |||| |||||||||||||||| ||||||||||||||  |||||||    
T  26926950 ctcttatcaagagtcttatctatctgatgtgggacatggttttttcc 26926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 32034236 - 32034084
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||| |||||| ||||||||||||||| |||||||| || ||||||||| |||| |||| ||||||  ||  ||||||||||||||| | |||    
T  32034236 tggcccttgaaatcgacaagctctgataccataatgaaattggaggtctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctttgtat 32034138  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||| ||||||||||||||||| ||||||||||||| ||||||||||||    
T  32034137 aaactcttatcaagagtcttatctattcgatgtgggacatgagtttttcccaat 32034084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 40926926 - 40926782
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||| |||||| ||||||||||||||| |||||||  || ||||||||| |||| |||| ||||||  ||   ||||||||||||||||||||    
T  40926926 tggcccttgaaatcgacaggctctgataccataatgaaattgaaggactaactcatcctta-aaaaccggttcataaggagaggattgtctcctctatat 40926828  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgttt 146  Q
    |||| |||| |||||||||||||||| |||| ||||||||||||||    
T  40926827 aaactcttatcaagagtcttatctatctgatatgggacatgtgttt 40926782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 4191081 - 4191233
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| ||||||||||||||  |||||| |||||||||||||| ||||||||| ||| |   ||  | ||||||||||||||| ||||    
T  4191081 ggcccttgaattcgacaagctctgataccatattgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtcaggattgtctcctctttata 4191180  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  4191181 aactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 4191233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 35011801 - 35011650
Alignment:
Q  3 gcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataa 102  Q
    |||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||||||  ||  |||||| |||||||||| |||||    
T  35011801 gcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataa 35011702  T
Q  103 acacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     | |||| ||||||||||||||| |  ||||||||| || |||||| |||||    
T  35011701 tctcttatcaagagtcttatctactcaatgtgggacttgggttttttccaat 35011650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9264458 - 9264611
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   | |||| |||||||||||||| ||||||||| ||| |   ||| ||||||||| ||||||| |||    
T  9264458 tggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttat 9264557  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    | || |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  9264558 atactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaat 9264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 44367704 - 44367572
Alignment:
Q  21 ctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtctt 120  Q
    |||||||||||||| |||||| | |||||||||||| |||  |||||| ||||  || |||||||||||||||||||||||||| |||  ||||||||||    
T  44367704 ctctgataccataatgaaatttgaggcctaactcatccttg-aaaatcagttcataagttgaggattgtctcctctatataaactcttctcaagagtctt 44367606  T
Q  121 atctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||| |||| || |||||  ||||||||||||    
T  44367605 atctatctgatatgagacatcggtttttcccaat 44367572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 37058730 - 37058882
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   ||||||  ||||||||||||| ||||||||| |||||   ||  ||||||||  ||||||| ||||    
T  37058730 ggcccttgaattcgacaagctctgataccatgttgaaattttgggcctaactcatccttacaaaaccggtttgtaaggtgaggattacctcctctttata 37058829  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     || |||  |||||||||| ||||| ||||||||||| || ||||||||||||    
T  37058830 tactcttctcaagagtcttgtctatctgatgtgggacttgggtttttcccaat 37058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 53640131 - 53640283
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| ||||||||||||||  ||||||  |||| |||||||| |||||| || ||| |   ||  ||||||||| ||||||| ||||    
T  53640131 ggcccttgaattcgacaagctctgataccatattgaaatttagggcataactcatccttacataaccggcttgtaaggtgaggattgcctcctctttata 53640230  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     || |||  |||||||||||||||| ||||||||||| || ||||||||||||    
T  53640231 tactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaat 53640283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 39956632 - 39956779
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| || ||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||    
T  39956632 tggcccttgaattcgacaagctctgataccatgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttat 39956731  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgttttt 148  Q
    |||| |||  |||||||||| ||||| ||||||||||| || ||||||    
T  39956732 aaactcttctcaagagtcttgtctatctgatgtgggacttgagttttt 39956779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 19984610 - 19984734
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||  |||||| ||||||||||||||| |||||||| || ||||||||| |||| |||| ||||||  ||  ||||||||||||  |||||||    
T  19984610 tggcccttgatatcgacaggctctgataccataatgaaattggaggtctaactcatcctta-aaaaccggttcataaggtgaggattgtctagtctatat 19984708  T
Q  101 aaacacttaccaagagtcttatctat 126  Q
    |||| |||||||| ||||||||||||    
T  19984709 aaactcttaccaaaagtcttatctat 19984734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 51642594 - 51642747
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  51642594 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 51642693  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggac-atgtgtttttcccaat 154  Q
     || |||  ||||||||||||||||  ||||||||||  || ||||||||||||    
T  51642694 tactcttctcaagagtcttatctatccgatgtgggactttgggtttttcccaat 51642747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 9264252 - 9264404
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  9264252 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 9264351  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     || |||  |||||||||| |||||  |||||||||| ||  |||||||||||    
T  9264352 tactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaat 9264404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 35011975 - 35011857
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||||||  ||  |||||| || ||||||| ||||||| |||| ||||||||||||||| |  ||||||    
T  35011975 gaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaatgtgg 35011876  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  35011875 gacttgggtttttcccaat 35011857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 37039947 - 37040088
Alignment:
Q  6 cttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaaca 105  Q
    ||||||||||||| | ||||||||||||| |||||||| |||||||||||| |||| ||| |   |||  ||  |||| |||||||||||||||| |||     
T  37039947 cttgaattcgacaggttctgataccataatgaaattggaggcctaactcatccttaaaaactaa-ttcataaggtgagaattgtctcctctatattaact 37040045  T
Q  106 cttaccaagagtcttatctatttgatgtgggacatgtgttttt 148  Q
    |||| |||||||||||||| || ||||||| ||||| ||||||    
T  37040046 cttatcaagagtcttatcttttcgatgtggaacatgagttttt 37040088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 39018785 - 39018901
Alignment:
Q  37 aaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggg 136  Q
    ||||||| |||||||||||| |||| ||| | |||||  || |||||||||||||||||||||||||| | || ||||||||||||||||  ||||||||    
T  39018785 aaattggaggcctaactcatccttaaaaact-ggttcataagttgaggattgtctcctctatataaactcctatcaagagtcttatctatccgatgtggg 39018883  T
Q  137 acatgtgtttttcccaat 154  Q
    |||   ||||||||||||    
T  39018884 acaaaagtttttcccaat 39018901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 39269610 - 39269506
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||||| ||||||||||||  ||| |||| | ||||  || |||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||    
T  39269610 gaaattggaggcctaactcatcttta-aaaaccagttcataagttgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgg 39269512  T
Q  136 gacatg 141  Q
    ||||||    
T  39269511 gacatg 39269506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 40927097 - 40927026
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttccc 151  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||||||||  ||||||||    
T  40927097 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatggatttttccc 40927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 27177558 - 27177425
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctata 99  Q
    |||||||||| ||||||| |||||||||||||   |||||| ||||||||| |||| ||||||||| ||| || ||| | |||||| |||||| ||||||    
T  27177558 tggcccttgatttcgacaagctctgataccatgttgaaatttggggcctaaatcatccttacaaaaccggcttatgaga-tgaggactgtctcatctata 27177460  T
Q  100 taaacacttaccaagagtcttatctatttgatgtg 134  Q
    ||||| ||||  |||||||| |||||| |||||||    
T  27177459 taaactcttataaagagtctcatctatctgatgtg 27177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 50692637 - 50692519
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||| |||||||||| |||||  |||||||    
T  50692637 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgg 50692538  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  50692537 gacttgggtttttcccaat 50692519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 37223721 - 37223568
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| || ||||||||| | ||||||||| ||| |   ||  ||| ||||| ||||||| |||    
T  37223721 tggcccttgaattcgacaagctctgataccatgttgaaatttggagcctaactcttccttacaaaaccggcttgtaaggtgatgattgcctcctctttat 37223622  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||  || |||||||||||||  |||||||||| |  ||||||||||||    
T  37223621 aaactcttctcaggagtcttatctatccgatgtgggacttaggtttttcccaat 37223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 22407607 - 22407759
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  |||||| || ||||||| ||||    
T  22407607 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttata 22407706  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     || |||  | |||||||| |||||  |||||||||| ||  |||||||||||    
T  22407707 tactcttctcgagagtcttgtctatccgatgtgggacttggatttttcccaat 22407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 26915181 - 26915109
Alignment:
Q  82 aggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||| |||||| || |||||| |||||    
T  26915181 aggattgtctcctctatataaactcttatcaagagtcttatctatctgatctgggacttgagttttttccaat 26915109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 40926769 - 40926710
Alignment:
Q  81 gaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacat 140  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||    
T  40926769 gaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacat 40926710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 154
Target Start/End: Original strand, 42637723 - 42637858
Alignment:
Q  22 tctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggat----tgtctcctctatataaacacttaccaagagt 117  Q
    ||||||||||||| |||||||| || ||||||||| |||| |||| ||||||  ||  |||||||    |||||||| ||||||||| |||| |||||||    
T  42637723 tctgataccataatgaaattggaggtctaactcatcctta-aaaaccggttcataaggtgaggattgtctgtctcctttatataaactcttatcaagagt 42637821  T
Q  118 cttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||   |||||||| ||| ||||||||||||    
T  42637822 cttatctatccaatgtgggatatgagtttttcccaat 42637858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 9264079 - 9264197
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||| || |||  ||||||||||||||||  |||||||    
T  9264079 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgg 9264178  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  9264179 gacttgggtttttcccaat 9264197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 25578722 - 25578791
Alignment:
Q  84 gattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||  ||||||||||||| ||||||||||||    
T  25578722 gattgtctcctctatataaactcttatcaa-agtcttatctatccgatgtgggacatgggtttttcccaat 25578791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 49477638 - 49477528
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  ||||||||||||||||  |||||||||| ||     
T  49477638 ggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgg 49477539  T
Q  143 gtttttcccaa 153  Q
    |||||||||||    
T  49477538 gtttttcccaa 49477528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 50692434 - 50692316
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||    
T  50692434 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgg 50692335  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  50692334 gacttgggtttttcccaat 50692316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 39078730 - 39078882
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    |||| |||||||||| | | |||||||||||   | |||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  39078730 ggcctttgaattcgataagttctgataccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 39078829  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||| |||||  ||| |||||| || ||||||||||||    
T  39078830 aactcttctcaagagtcttgtctatccgatatgggacttgggtttttcccaat 39078882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 4029637 - 4029739
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| |||||   ||  ||| |||||| |||||| ||||||| |||  ||||||||||||||||  |||||||    
T  4029637 gaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactcttctcaagagtcttatctatccgatgtgg 4029736  T
Q  136 gac 138  Q
    |||    
T  4029737 gac 4029739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 22339852 - 22339734
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||||||||| ||||||||| ||  |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||    
T  22339852 gaaattgggggcctaactcatccttacaaaaccgacttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgg 22339753  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| ||  |||||||||||    
T  22339752 gacttggatttttcccaat 22339734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 33799235 - 33799157
Alignment:
Q  31 ataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacactta 109  Q
    ||||||||||||| || ||||||||| ||||||||||||||||   |  | ||||||||||||||||||||||| ||||    
T  33799235 ataaagaaattggaggtctaactcatccttacaaaatcggttcatcaggttaggattgtctcctctatataaactctta 33799157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 35015596 - 35015478
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||| ||||||| ||||||||| ||| |   ||| ||||||||| ||||||| |||||||  ||| ||||||| ||||||||  |||||||    
T  35015596 gaaatttggggccaaactcatacttacaaaaccggcttataaagtgaggattgcctcctctttataaacttttatcaagagttttatctatccgatgtgg 35015497  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| ||  |||||||||||    
T  35015496 gacttggctttttcccaat 35015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 50338423 - 50338493
Alignment:
Q  84 gattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||| || ||| || ||||||| ||||    
T  50338423 gattgtctcctctatataaactcttatcaagagtcttatctatctgatatgagacttgagtttttctcaat 50338493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 51338478 - 51338552
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| |||| || |||  |||||||||||||||| ||||||||||| || ||||||||||||    
T  51338478 tgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaat 51338552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 54495598 - 54495524
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||| ||||||| |||  ||||||||||||||||  |||||||||| ||  |||||||||||    
T  54495598 tgaggattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaat 54495524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 19984375 - 19984479
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    |||||||| |||||| ||||||||||||||| |||||||  |||||||||||| |||| |||| ||| ||  ||  || |||||| ||||||||||||||    
T  19984375 cccttgaaatcgacaggctctgataccataatgaaattgaaggcctaactcatcctta-aaaaccggatcgtaaggtgcggattgcctcctctatataaa 19984473  T
Q  104 cactta 109  Q
    | ||||    
T  19984474 ctctta 19984479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 40230597 - 40230750
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||| ||||||||||| ||| |||||||||   |||||| ||||| |||||||  ||||||||| ||| |   ||  ||||||||| ||||||| |||    
T  40230597 tggcccctgaattcgacaagctttgataccatgttgaaatttggggcttaactcaaccttacaaaaccggcttgtaaggtgaggattgcctcctctttat 40230696  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| || | ||||||||| ||||||  ||||||| || || ||||||| ||||    
T  40230697 aaactctcatcaagagtctcatctatccgatgtggaacttgggtttttctcaat 40230750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 33799047 - 33798999
Alignment:
Q  8 tgaattcgacatgctctgataccataaagaaattgggggcctaactcat 56  Q
    |||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  33799047 tgaaatcgacaggctctgataccataaagaaattggaggcctaactcat 33798999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 34992644 - 34992576
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgttttt 148  Q
    ||||||||| ||||||| ||||||| |||  |||||||||||||||| ||||||||||| || ||||||    
T  34992644 tgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 34992936 - 34992868
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgttttt 148  Q
    ||||||||| ||||||| ||||||| |||  |||||||||||||||| ||||||||||| || ||||||    
T  34992936 tgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 32515948 - 32516011
Alignment:
Q  84 gattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttt 147  Q
    |||| |||||||||||||||| | || ||||||||||||||||  ||||||||||||| |||||    
T  32515948 gattatctcctctatataaactcctatcaagagtcttatctatccgatgtgggacatgagtttt 32516011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 32516167 - 32516229
Alignment:
Q  12 ttcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctg 75  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||| |||| |||| ||||||||    
T  32516167 ttcgacaggctctgataccataatgaaattggaggcctaactcatcctta-aaaaccggttctg 32516229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 39269168 - 39269070
Alignment:
Q  23 ctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttat 122  Q
    |||||| ||||| |||||||| || ||||||||| |||| ||| | |||||  ||  ||||||||| ||||||||||||||| |||| ||||||||||||    
T  39269168 ctgatatcataatgaaattggaggtctaactcatccttaaaaact-ggttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttat 39269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 11414474 - 11414370
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||| | |||||||||||| ||||||||| ||| |||| ||  ||||||||||||||||| ||||||| |||  |||||||||||| |||  ||||||    
T  11414474 gaaatttgaggcctaactcatccttacaaaaccggcttct-aaggtgaggattgtctcctctttataaactcttctcaagagtcttat-tatccgatgtg 11414377  T
Q  135 ggacatg 141  Q
    |||||||    
T  11414376 ggacatg 11414370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 19820507 - 19820632
Alignment:
Q  22 tctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtctta 121  Q
    |||||||||||   |||||| | |||||||||||| ||||||||| |||||   ||  ||||||||||||||||| ||||||| |||  ||||||| |||    
T  19820507 tctgataccatgttgaaatttgaggcctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaagagtttta 19820606  T
Q  122 tctatttgatgtgggacatgtgttttt 148  Q
    | |||  ||||||| ||||| ||||||    
T  19820607 t-tatccgatgtggaacatgggttttt 19820632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 40230428 - 40230545
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||  ||||||||| ||| ||  ||  ||||||||| ||||||| ||||||| || | ||||||||| ||||||  |||||||    
T  40230428 gaaatttggggcctaactcaaccttacaaaaccggctcgtaaggtgaggattg-ctcctctttataaactctcatcaagagtctcatctatccgatgtgg 40230526  T
Q  136 gacatgtgtttttcccaat 154  Q
     || || ||||||||||||    
T  40230527 aacttgggtttttcccaat 40230545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 44145158 - 44145216
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggac 138  Q
    |||| |||||||||||| |||||||  ||| |||||||||||||||| |||||||||||    
T  44145158 tgagtattgtctcctctttataaactattatcaagagtcttatctatctgatgtgggac 44145216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 50203850 - 50203940
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctat 126  Q
    |||||| |||||||||||||| ||||||||| |||||   ||  |||||| || ||||||| ||||||| |||  ||||||||||||||||    
T  50203850 gaaatttggggcctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttatctat 50203940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 29763701 - 29763790
Alignment:
Q  48 ctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggga 137  Q
    |||| |||| ||||||||| ||||||  ||  || ||| |||||||||| ||||||| |||| ||||||||||||||||  |||||||||    
T  29763701 ctaattcatccttacaaaaccggttcataagatggggagtgtctcctctttataaactcttatcaagagtcttatctatccgatgtggga 29763790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 19984205 - 19984265
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacat 140  Q
    ||||||||| |||  |||||||| | |||||||||||||||||||||  ||||||||||||    
T  19984205 tgaggattgcctcacctatataagctcttaccaagagtcttatctatccgatgtgggacat 19984265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 53761391 - 53761507
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||  ||||||||| ||| ||   |  |||||| || ||||||| ||||||| |||| |||| |||||||||||  || ||||    
T  53761391 gaaatttggggcctaactcaaccttacaaaaccggctcattaggtgaggagtgcctcctctttataaactcttatcaagggtcttatctatccgaagtgg 53761490  T
Q  136 gacatgtgtttttccca 152  Q
    ||| || ||||||||||    
T  53761491 gacttgggtttttccca 53761507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 25578892 - 25578955
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaat 67  Q
    |||||||||||||||   ||||||||||||| ||| ||||||||||||||  | ||||||||||    
T  25578892 cccttgaattcgacagaatctgataccataatgaagttgggggcctaacttgtccttacaaaat 25578955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 26927148 - 26927105
Alignment:
Q  111 caagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||||||| |||||||||||| | ||||||||||||    
T  26927148 caagagtcttatctatatgatgtgggacaagagtttttcccaat 26927105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 49477472 - 49477349
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| ||| ||||| |||   | || | |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  49477472 ggcccttgaattcgacaagctttgatatcatgttgtaaattggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 49477373  T
Q  102 aacacttaccaagagtcttatcta 125  Q
    |||  ||  |||||||||||||||    
T  49477372 aacttttctcaagagtcttatcta 49477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 54369143 - 54369048
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggac 138  Q
    |||||||||||||| ||||| ||| |||||   ||| |||||| || ||||||| ||||||| |||  |||||||| |||||||  ||||||||||    
T  54369143 ggggcctaactcatccttacgaaaccggtttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggac 54369048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 4256345 - 4256243
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| ||||||||||||||||||| |||| ||  |   ||| |||||| |||||||||| ||||||| |||  ||||||| ||||| ||  |||||||    
T  4256345 gaaatttggggcctaactcattcttaaaaaaccgacttgtaaaatgaggagtgtctcctctttataaactcttctcaagagtgttatccatccgatgtgg 4256246  T
Q  136 gac 138  Q
    |||    
T  4256245 gac 4256243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 12799820 - 12799758
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    ||||||||||||||| |||||||||||||   |||||| ||||| | |||||| |||||||||    
T  12799820 cccttgaattcgacaagctctgataccatgttgaaatttggggcttcactcatccttacaaaa 12799758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33909790 - 33909856
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaa-ttgggggcctaactcattcttacaaaa 66  Q
    |||||||||||||||||| ||||| |||||||   |||| ||||| ||||||||||| |||||||||    
T  33909790 tggcccttgaattcgacaagctctaataccatgttgaaatttgggagcctaactcatccttacaaaa 33909856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 39956504 - 39956578
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||| ||||||| |||   |||| |||| ||||| ||||||||||| ||  |||||||||||    
T  39956504 tgaggattgtctcctctttataaactcttcttaagattcttgtctatctgatgtgggacttggatttttcccaat 39956578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 43101364 - 43101466
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||| ||||||| ||||||||| || ||   ||  |||||| || ||||||| ||||||| |||  |||||||| ||||||| ||||||||    
T  43101364 gaaatttggggccaaactcatccttacaaaaccgatttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatctgatgtgg 43101463  T
Q  136 gac 138  Q
    |||    
T  43101464 gac 43101466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 44367845 - 44367799
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctat 126  Q
    ||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  44367845 tgaggattgcctcctctatataaactcttatcaagagttttatctat 44367799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 44573766 - 44573648
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtct 119  Q
    |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  |||||| || ||||||| ||||||| |||  ||||| | |    
T  44573766 gctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagatttt 44573667  T
Q  120 tatctatttgatgtgggac 138  Q
    ||||||| | |||||||||    
T  44573666 tatctatcttatgtgggac 44573648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 47702461 - 47702535
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| |||||||  ||| || |||  ||||||||| ||||||  |||||||||| |||||||||||||||    
T  47702461 tgaggattgcctcctcttcatatactcttctcaagagtctcatctatccgatgtgggacttgtgtttttcccaat 47702535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 51642421 - 51642511
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctat 126  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||| || |||  ||||||||||||||||    
T  51642421 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctat 51642511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 12800013 - 12799908
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    |||||||||||||||  || ||||||||||  |||||| ||||| |||||||| | ||||||||| |||   ||  ||||||||| || |||| ||||||    
T  12800013 cccttgaattcgacaaactttgataccatattgaaatttggggcttaactcatccatacaaaatcagtttgtaaggtgaggattgccttctctttataaa 12799914  T
Q  104 cactta 109  Q
    | ||||    
T  12799913 ctctta 12799908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20737166 - 20737105
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttac 62  Q
    ||||||||||| |||||| |||||||||||||   |||||| ||||||||| |||| |||||    
T  20737166 tggcccttgaaatcgacaggctctgataccatgttgaaatttggggcctaaatcatgcttac 20737105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 42259020 - 42258903
Alignment:
Q  37 aaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggg 136  Q
    ||||| || ||||||||||| ||| ||||||||| |   ||  ||||||||| ||||||| |||| || |||  ||||| ||||||||||  ||||||||    
T  42259020 aaatttggagcctaactcatccttgcaaaatcggcttgtaaggtgaggattgcctcctctttatatactcttctcaagaatcttatctatccgatgtggg 42258921  T
Q  137 acatgtgtttttcccaat 154  Q
    || ||  |||||||||||    
T  42258920 acttggatttttcccaat 42258903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 50057286 - 50057237
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcg 69  Q
    |||||||||||||   |||||| |||||||||||||| ||||||||||||    
T  50057286 gctctgataccatgttgaaatttggggcctaactcatccttacaaaatcg 50057237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 50057416 - 50057367
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcg 69  Q
    |||||||||||||   |||||| |||||||||||||| ||||||||||||    
T  50057416 gctctgataccatgttgaaatttggggcctaactcatccttacaaaatcg 50057367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 19984475 - 19984515
Alignment:
Q  154 tcttatctatccgacgtgagatatgagtttttcccaataca 194  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  19984475 tcttatctatccgatgtgggacatgagtttttcccaataca 19984515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 24539258 - 24539162
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctata-taaacacttaccaagagtcttatctatttgatgtgggac 138  Q
    |||||||||||||| ||||||||||||| |   ||  |||||| |||||||||| ||  |||| |||| |||||||||||||||  |||||| ||||    
T  24539258 ggggcctaactcatccttacaaaatcggcttgtaaggtgaggagtgtctcctctttacaaaactcttatcaagagtcttatctaactgatgtaggac 24539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 25578754 - 25578798
Alignment:
Q  154 tcttatctatccgacgtgagatatgagtttttcccaatacatccc 198  Q
    |||||||||||||| ||| || ||| |||||||||||||||||||    
T  25578754 tcttatctatccgatgtgggacatgggtttttcccaatacatccc 25578798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 9e-39; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 33834095 - 33833943
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||| |||| |||| ||||||  ||  |||||||||||||||||||||    
T  33834095 tggcccttgaaatcgacaggctctgataccataatgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatat 33833997  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||| ||||||||||||||||  ||||||||||||| |||||| |||||    
T  33833996 aaactcttatcaagagtcttatctatccgatgtgggacatgggttttttccaat 33833943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 7832924 - 7833070
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||  ||  ||||||||| ||||||||||||||    
T  7832924 cccttgaattcgacaggctctgataccataatgaaattgggggcctaactcatccttaaaaaaccggttcataaggtgaggattgcctcctctatataaa 7833023  T
Q  104 cacttaccaagagtcttatctatttgatgtgggacatgtgtttttcc 150  Q
    | | || |||||||||||||||| |  |||| |||||| ||||||||    
T  7833024 ctcctatcaagagtcttatctatctagtgtgagacatgagtttttcc 7833070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 10903443 - 10903595
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||| ||| ||| ||||||||||| |||||||| || |||||||||||||| ||| | | | |  || |||||||||| |||||||||||    
T  10903443 tggcccttgaattcaacaggctttgataccataatgaaattggaggtctaactcattcttaaaaactag-tacataagttgaggattgcctcctctatat 10903541  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||| ||||||||||||||||  ||||||||||||| ||||||||||||    
T  10903542 aaactcttatcaagagtcttatctatccgatgtgggacatgagtttttcccaat 10903595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 31357667 - 31357786
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||| | |||||||||||| ||||||||||||| |||  ||  ||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||    
T  31357667 gaaatttgaggcctaactcatccttacaaaatcggcttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtg 31357766  T
Q  135 ggacatgtgtttttcccaat 154  Q
    ||||||| ||||||||||||    
T  31357767 ggacatgggtttttcccaat 31357786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 38948374 - 38948524
Alignment:
Q  3 gcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataa 102  Q
    |||||||||||||||| ||||||||||||||| |||||||| || ||||||||| |||| ||||||  |||  ||  |||| ||||||||||||||||||    
T  38948374 gcccttgaattcgacaagctctgataccataatgaaattggaggtctaactcatcctta-aaaatcaattcacaaggtgagaattgtctcctctatataa 38948472  T
Q  103 acacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    || ||||  ||||||||||||| |  |||||||||||||  |||||||||||    
T  38948473 actcttataaagagtcttatctttccgatgtgggacatgattttttcccaat 38948524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 5266470 - 5266352
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||||| || ||||||||| ||||||||| ||||||  || ||||||||||  |||||||||||| | |||| |||||||||||||||| ||||||||    
T  5266470 gaaattggaggtctaactcatccttacaaaaccggttcataagttgaggattggatcctctatataatctcttatcaagagtcttatctatctgatgtgg 5266371  T
Q  136 gacatgtgtttttcccaat 154  Q
    |||||| ||||||||||||    
T  5266370 gacatgggtttttcccaat 5266352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 13310384 - 13310536
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| |||||    || |||||| |||||||||| ||||    
T  13310384 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggtttgtgaagtgaggagtgtctcctctttata 13310483  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| ||   ||||||||| |||||| ||| ||||||| || ||||||| ||||    
T  13310484 aactctcgtcaagagtctcatctatctgacgtgggacttgggtttttctcaat 13310536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 10903313 - 10903388
Alignment:
Q  79 ttgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  10903313 ttgaggattgcctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaat 10903388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 33834222 - 33834148
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||  |||||||||||    
T  33834222 tgaggattgtctcctctatataaactcttatcaagagtcttatctatctgatgtgggacatggatttttcccaat 33834148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 33855802 - 33855684
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||||||||||||| ||||||  ||  |||||| |||||||||| |||||||  ||| || |||||||||||||  |||||||    
T  33855802 gaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatctatccgatgtgg 33855703  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  33855702 gacttgggtttttcccaat 33855684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8682030 - 8681893
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| | |||||||||||||||||||||| ||  |   |  |||| ||||| ||| ||| |||    
T  8682030 tggcccttgaattcgacaagctctgataccatgttgaaatttgaggcctaactcattcttacaaaaccgacttatatgttgaagattgcctcttctttat 8681931  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggac 138  Q
    |||| |||| |||||||||||||||| |||||||||||    
T  8681930 aaactcttatcaagagtcttatctatctgatgtgggac 8681893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 9378938 - 9378786
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   | |||| |||| ||||||||| ||||||||| ||| |   ||    ||||||| ||||||| ||||    
T  9378938 ggcccttgaattcgacaagctctgataccatgttgtaatttggggtctaactcatccttacaaaaccggcttgtaaggcaaggattgcctcctctttata 9378839  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  ||||||||||||||||| |||||||||| || ||||||||||||    
T  9378838 aactcttctcaagagtcttatctattcgatgtgggacttgggtttttcccaat 9378786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 22841164 - 22841045
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaat-tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||||||||||||||||   |||||||||  |||||   ||  ||||||||||||||||||||||||| |||||||||||||||||||||  |||||     
T  22841164 gaaattgggggcctaactctaccttacaaaacaggttcaataaggtgaggattgtctcctctatataaactcttaccaagagtcttatctatccgatgta 22841065  T
Q  135 ggacatgtgtttttcccaat 154  Q
    || |||| ||||||||||||    
T  22841064 gggcatgggtttttcccaat 22841045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 29646174 - 29646057
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||||||||| |||| |||| ||||||  ||  ||||||||| ||||||||||||||| | || ||||||||||||||||   ||||||    
T  29646174 gaaattgggggcctaactcatcctta-aaaaccggttcataaggtgaggattgcctcctctatataaactcctatcaagagtcttatctatccaatgtgg 29646076  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||||||  |||||||||||    
T  29646075 gacatgaatttttcccaat 29646057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 16565040 - 16564887
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||| | |||||||||||||   ||||||   |||||||||||| |||| |||| ||||||  ||  |||||| || ||||| | |||    
T  16565040 tggcccttgaattcgataagctctgataccatgttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttat 16564941  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| ||||  |||||||||||||||  |||||||||| || ||||||||||||    
T  16564940 aaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaat 16564887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16600622 - 16600775
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||| | |||||||||||||   ||||||   |||||||||||| |||| |||| ||||||  ||  |||||| || ||||| | |||    
T  16600622 tggcccttgaattcgataagctctgataccatgttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttat 16600721  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| ||||  |||||||||||||||  |||||||||| || ||||||||||||    
T  16600722 aaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaat 16600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 23396754 - 23396602
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||| ||| ||||    
T  23396754 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcatctttata 23396655  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     || |||  ||||||||||||||||  | |||||||| ||  |||||||||||    
T  23396654 tactcttctcaagagtcttatctatccgttgtgggacttggatttttcccaat 23396602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 29645960 - 29645814
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||||||||||  |||||||||||||| ||||||| ||  ||| ||||| |||| |||| ||||||  ||  ||||||||| ||||| |||||    
T  29645960 tggcccttgaattcgacagactctgataccataatgaaattgaggttctagctcatcctta-aaaaccggttcataaggtgaggattgcctcctttatat 29645862  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgttttt 148  Q
    |||| | || ||||||||||||||||  ||||||  ||||| ||||||    
T  29645861 aaactcatatcaagagtcttatctatccgatgtgaaacatgagttttt 29645814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 35866639 - 35866750
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||||||||||||| ||||||||| ||| |   || ||||| |||| | ||||||||||||| |||| ||||||||||||||||  |||||||||| ||     
T  35866639 ggggcctaactcatccttacaaaaccggcttgtaagttgagtattgccccctctatataaactcttatcaagagtcttatctatccgatgtgggacttgg 35866738  T
Q  143 gtttttcccaat 154  Q
    ||||||||||||    
T  35866739 gtttttcccaat 35866750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 4258162 - 4258315
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| | ||||||| |||| |||| |||  ||||||  ||  |||||| || ||||| |   |    
T  4258162 tggcccttgaattcgacaagctctgataccatgttgaaatttgaggcctaattcatccttaaaaagccggttcataaggtgaggagtgcctcctattggt 4258261  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||| ||||||||||||||||  |||||||||| || ||||||||||||    
T  4258262 aaactcttatcaagagtcttatctatccgatgtgggacttgagtttttcccaat 4258315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 24377803 - 24377955
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |   | ||||||||| |||||| |||||||||||||| |||| ||| | | |||  ||  ||||||||||||| |||||||    
T  24377803 tggcccttgaattcgacaagtattaataccataatgaaattaggggcctaactcatccttaaaaact-gattcgtaagatgaggattgtctcatctatat 24377901  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| | || ||| ||| ||||||||  |||| |||||||| ||||||||||||    
T  24377902 aaactcctatcaaaagttttatctatccgatgcgggacatgagtttttcccaat 24377955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 39808555 - 39808708
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataa-agaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||||||||| |||||||||||||   ||| ||| |||||||||||||| || ||||||  || |   ||  ||||||||| ||||||| |||    
T  39808555 ggcccttgaattcgacaagctctgataccatgttagacatttggggcctaactcatcctcacaaaactggcttgtaaggtgaggattgcctcctctttat 39808654  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  39808655 aaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 39808708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 23390646 - 23390583
Alignment:
Q  91 tcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||||| |||| ||||||||||||||||  ||||||||||||| ||||||||||||    
T  23390646 tcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaat 23390583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 6783149 - 6783031
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  ||||||||||||||||  ||||||     
T  6783149 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtga 6783050  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  6783049 gacttgggtttttcccaat 6783031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 16565209 - 16565091
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| | |||||||||||| | || |||||||||||  ||  |||||| || ||||| | ||||||| |||| ||||||||||||||||  |||||||    
T  16565209 gaaatttgaggcctaactcatccgtaaaaaatcggttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgg 16565110  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  16565109 gacttgggtttttcccaat 16565091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 16600453 - 16600571
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| | |||||||||||| | || |||||||||||  ||  |||||| || ||||| | ||||||| |||| ||||||||||||||||  |||||||    
T  16600453 gaaatttgaggcctaactcatccgtaaaaaatcggttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgg 16600552  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  16600553 gacttgggtttttcccaat 16600571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 33855625 - 33855474
Alignment:
Q  7 ttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaa----attgaggattgtctcctctatataa 102  Q
    ||||||||||||  ||||||||||||   |||||| |||||||||||||| ||||||||| ||||||  ||    |  ||||| |||||||||| |||||    
T  33855625 ttgaattcgacaaactctgataccatgttgaaatttggggcctaactcatccttacaaaagcggttcataaggtgagggaggagtgtctcctctttataa 33855526  T
Q  103 acacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||  ||| || |||||||||||||  ||| |||||| || ||||||||||||    
T  33855525 actattatcacgagtcttatctatccgatatgggacttgggtttttcccaat 33855474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 30768485 - 30768415
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcc 150  Q
    ||||||| ||||||||||||||||   ||| ||||||||||||||||  ||||||||||||| ||||||||    
T  30768485 tgaggatcgtctcctctatataaattattatcaagagtcttatctatccgatgtgggacatgagtttttcc 30768415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 5266252 - 5266195
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattctta 61  Q
    ||||||||||||||| |||||||||||| || |||||||| |||||||||||| ||||    
T  5266252 cccttgaattcgacaggctctgataccagaatgaaattggaggcctaactcatcctta 5266195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 31374911 - 31374786
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| ||||| ||| |||   |||||| |||| ||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||    
T  31374911 tggcccttgaattcgacaagctctaatatcatgttgaaattcggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttat 31374812  T
Q  101 aaacacttaccaagagtcttatctat 126  Q
    |||| |||  ||| ||||||||||||    
T  31374811 aaactcttctcaatagtcttatctat 31374786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 49040633 - 49040565
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgttttt 148  Q
    |||||||  |||||||||||||||| |||| ||||||||||||||||  |||||| |||||| ||||||    
T  49040633 tgaggatattctcctctatataaactcttatcaagagtcttatctatccgatgtgagacatgagttttt 49040565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 258575 - 258520
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcat 56  Q
    |||||||||||||||||| |||||||||||||   |||||| ||||||||||||||    
T  258575 tggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcat 258520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 2179722 - 2179647
Alignment:
Q  80 tgaggattgtctcctctatataaacacttac-caagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||||||| ||||||| ||| | ||||||||||||||||  |||||||||| ||  |||||||||||    
T  2179722 tgaggattgtctcctctttataaactctttctcaagagtcttatctatccgatgtgggacttgaatttttcccaat 2179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 48114101 - 48113990
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    ||||||||||||||||||||| || ||||||  ||  |  ||| ||  |||||| ||||||| |||| ||||||||||||||||  |||||||||| ||     
T  48114101 ggggcctaactcattcttacacaaccggttcataagatttggagtgcttcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgg 48114002  T
Q  143 gtttttcccaat 154  Q
    ||| ||||||||    
T  48114001 gttattcccaat 48113990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 1661184 - 1661286
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||||||||||||| ||| |   ||  |||||| || ||||||| ||||||| |||  ||||||| ||||||||  |||||||    
T  1661184 gaaatttggggcctaactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatctatccgatgtgg 1661283  T
Q  136 gac 138  Q
    |||    
T  1661284 gac 1661286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 6782893 - 6782819
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| ||||||| |||  ||||||||||||||||  |||||| ||| || ||||||||||||    
T  6782893 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaat 6782819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 6813071 - 6813188
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||| |||||||||||||| || |||||| ||| || |||  ||||||| || ||||||| ||||||| || | ||||||||  ||||||  ||||||    
T  6813071 gaaatttggggcctaactcatcctcacaaaaccggcttgtgag-ttgaggagtgcctcctctttataaactctcatcaagagtcccatctatccgatgtg 6813169  T
Q  135 ggacatgtgtttttcccaa 153  Q
    |||| ||||||||||||||    
T  6813170 ggacttgtgtttttcccaa 6813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 6813241 - 6813394
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctata 99  Q
    |||||||||||||||||| |||||||||||||   |||||| |||||||||||  | || |||||| ||| || || |  |||||| || ||||||| ||    
T  6813241 tggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaacttgtcctcacaaaaccggcttgtg-aggtgaggagtgcctcctcttta 6813339  T
Q  100 taaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||| || | ||||||||  |||||| ||||| ||||| || | ||||||||||    
T  6813340 taaactctcatcaagagtcccatctatctgatgcgggacttggggttttcccaat 6813394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 9379067 - 9378993
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| ||||||| |||  ||||||||||||||||  ||||||| || || ||||||||||||    
T  9379067 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtggaacttgggtttttcccaat 9378993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 23396925 - 23396823
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||| ||||||||| ||||||||| ||| |   || |||| ||||| ||||||| |||| || |||| |||||||||||||||| || |||||    
T  23396925 gaaatttggggtctaactcatccttacaaaaccggcttgtaagttgatgattgcctcctctttatatactcttatcaagagtcttatctatatgttgtgg 23396826  T
Q  136 gac 138  Q
    |||    
T  23396825 gac 23396823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 29252643 - 29252569
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| ||||||| |||  ||||||||||||||||  || ||||||| || ||||||||||||    
T  29252643 tgaggattgcctcctctttataaactcttctcaagagtcttatctatccgacgtgggacttgggtttttcccaat 29252569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 29780270 - 29780160
Alignment:
Q  24 tgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatc 123  Q
    ||||||||||  |||||| |||||||||||||| |||| |||| ||  |   ||  |||||| |||||||||| ||||||| |||  |||||||| ||||    
T  29780270 tgataccatattgaaatttggggcctaactcatccttataaaaccgacttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtcatatc 29780171  T
Q  124 tatttgatgtg 134  Q
    |||||||||||    
T  29780170 tatttgatgtg 29780160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 40703818 - 40703954
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcg-gttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||||||||| ||  ||||||||||  |||||| ||||| |||||||| ||||||||  ||  || || |  |||||| |||||||||| |||    
T  40703818 ggcccttgaattcgacaagcgttgataccatattgaaatttggggcataactcatccttacaaatccgacttgtg-aggtgaggagtgtctcctctttat 40703916  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggac 138  Q
    |||| || | ||||||||| ||||||  ||||||||||    
T  40703917 aaactctcatcaagagtctcatctatccgatgtgggac 40703954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 42068511 - 42068419
Alignment:
Q  7 ttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctata 99  Q
    ||||||||||||  | || ||| ||||| |||||||| |||||||||||| |||||| || || |||| ||  ||||||||| ||||||||||    
T  42068511 ttgaattcgacagacactaatatcataatgaaattggaggcctaactcatccttacataaccgattcttaagatgaggattgcctcctctata 42068419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 6751671 - 6751820
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctatataa 102  Q
    ||||||||||||||| |||||||||||||   |||||| ||||||||||||||  | |||||| ||| || || |  |||||| || ||||||| | |||    
T  6751671 cccttgaattcgacaagctctgataccatgttgaaatt-ggggcctaactcatcatcacaaaaccggcttgtg-aggtgaggagtgcctcctctttgtaa 6751768  T
Q  103 acacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    || || | ||||| ||| ||||||  |||||||||| || ||||||||||||    
T  6751769 actctcatcaagaatctcatctatccgatgtgggacttgggtttttcccaat 6751820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 43566103 - 43566040
Alignment:
Q  7 ttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcgg 70  Q
    |||||||||||| ||||| |||||||   |||||| |||| ||||| |||||||||||||||||    
T  43566103 ttgaattcgacaagctctaataccatgttgaaatttggggtctaacccattcttacaaaatcgg 43566040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 2232163 - 2232117
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctat 126  Q
    ||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  2232163 tgaggattgcctcctctatataaactcttatcaagagttttatctat 2232117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 4257993 - 4258111
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| | |||||||||||| |||| ||||  |||||  ||  |||||| || ||||| |  |||||| |||| ||||||||||||||||  ||||||     
T  4257993 gaaatttgaggcctaactcatccttaaaaaactggttcataaggtgaggagtgcctcctattgataaactcttatcaagagtcttatctatccgatgtga 4258092  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  4258093 gacttgggtttttcccaat 4258111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 47855995 - 47856085
Alignment:
Q  47 cctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggga 137  Q
    ||||||| || ||||||||||||| ||  ||  || ||| || ||||||| ||||||| |||| ||||||||||||||||  |||||||||    
T  47855995 cctaactgatgcttacaaaatcggctcataaggtggggagtgcctcctctttataaactcttatcaagagtcttatctatccgatgtggga 47856085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6238296 - 6238441
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||| |||||||| |||| |||| ||||||  ||  ||||||||| |||||||||||    
T  6238296 tggcccttgaattcgacaggctctgataccataatgaaattggaggcataactcatcctta-aaaaccggttcataaggtgaggattgcctcctctatat 6238394  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttt 147  Q
    |||| |||| || ||||||||||||| ||||||||||||||||||||    
T  6238395 aaactcttatcaggagtcttatctatctgatgtgggacatgtgtttt 6238441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 38871113 - 38871266
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| | |||||||| ||| ||||||||| ||||||| ||  |||||| || ||||||| |||    
T  38871113 tggcccttgaattcgacaagctctgataccatgttgaaatttgaggcctaacgcatccttacaaaaccggttcttaaggtgaggagtgcctcctctttat 38871212  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||  ||| |||||||||||||||| ||||||||||| || ||||||||||||    
T  38871213 aaacttttatcaagagtcttatctatctgatgtgggacttgggtttttcccaat 38871266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 47086226 - 47086388
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaa---------aatcggttctgaaattgaggattgtct 91  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| ||         || ||||||  ||  |||||| |||||    
T  47086226 tggcccttgaattcgacaggctctgataccataaagaaattggaggcctaactcatccttaaaaatcgtttttaaccggttcataaggtgaggagtgtct 47086325  T
Q  92 cctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    | | ||||||||| |||| |||||||||||||||| ||||||||||||||  ||||| |||||    
T  47086326 catgtatataaactcttatcaagagtcttatctatctgatgtgggacatggattttttccaat 47086388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 29273184 - 29273336
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| |||| || ||||    
T  29273184 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcccctttata 29273283  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  29273284 aactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 29273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 803427 - 803578
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    ||||||||||||| |||| |||||||||||||||  |||||||||| |||| ||| ||||| |||| ||||||  ||  |||||||||||||||||||||    
T  803427 tggcccttgaattagacaggctctgataccataattaaattgggggtctaattca-tctta-aaaaccggttcataagatgaggattgtctcctctatat 803524  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||   ||  |||| |||||| ||| |||||||||||||| |||||| |||||    
T  803525 aaacttctattaagaatcttatatatctgatgtgggacatgagttttttccaat 803578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 21538892 - 21539045
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||| ||||||||  ||||||| ||||||||| |||| ||||||||| |||||   ||  ||||||||| ||||||| |||    
T  21538892 tggcccttgaattcgacaagctccgataccatgtagaaatttggggcctaaatcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttat 21538991  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||  |||  |||||||||||| |||  ||| |||||||||  |||||||||||    
T  21538992 aaattcttctcaagagtcttatttatccgatatgggacatggatttttcccaat 21539045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 25799232 - 25799113
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaat-tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||||| |||||||||||| ||||||||| | |||||| ||  ||||||||| | ||||| ||||||| |||  ||||||| |||||||| |||||||    
T  25799232 gaaattggaggcctaactcatccttacaaaaccagttctgtaaggtgaggattgccccctctttataaactcttctcaagagttttatctatctgatgtg 25799133  T
Q  135 ggacatgtgtttttcccaat 154  Q
    ||||||| ||||||||||||    
T  25799132 ggacatgggtttttcccaat 25799113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 22826782 - 22826850
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgttttt 148  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||| ||||||    
T  22826782 tgaggattgtctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttt 22826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 39649043 - 39649195
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    |||||||||||| |||| |||||||||  ||   |||||| ||||| |||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  39649043 ggcccttgaatttgacaagctctgatattatgttgaaatttggggcataactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 39649142  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  39649143 aactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaat 39649195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 15392136 - 15392018
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||| ||||||||| ||||||| |||| || |||  ||||||||||||||||  |||||||    
T  15392136 gaaatttggggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgg 15392037  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  15392036 gacttgggtttttcccaat 15392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 40196835 - 40196924
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctat 126  Q
    ||||||||||||||||||||| |||| |||   | |||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  40196835 gaaattgggggcctaactcatccttaaaaaccagtttct-aaagtgaggattgtctcctctatataaactcttatcaagagtcttatctat 40196924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 43361716 - 43361861
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   ||||||| ||| ||||||||| ||||||||| ||| |   ||  |||||||||  |||||| ||||    
T  43361716 ggcccttgaattcgacaagctctgataccatgttgaaattgagggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttata 43361815  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttt 147  Q
    ||| |||  |||||||||| |||||  |||||||||| || |||||    
T  43361816 aactcttctcaagagtcttgtctatccgatgtgggacttgggtttt 43361861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7171675 - 7171615
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattctta 61  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| ||||    
T  7171675 tggcccttgaattcgacaggctctgataccataatgaaattggaggcctaactcatcctta 7171615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 5222761 - 5222687
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||  |||||||||| |  ||||||||||||    
T  5222761 tgaggattgtctcctctacataaactcttatcaagagtcttatctatcagatgtgggacttaggtttttcccaat 5222687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 9381046 - 9380893
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaat-tgaggattgtctcctctata 99  Q
    ||||||||||||| |||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| | || | | |||||||||||| |||| |     
T  9381046 tggcccttgaatttgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggct-tgtattgtgaggattgtcttctctttt 9380948  T
Q  100 taaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    || ||  ||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  9380947 tatactattctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 9380893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 40073184 - 40073083
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtct 119  Q
    ||||||||||||| ||||||||||  ||||||||||| || | |||| ||||||  ||  ||  ||||||||||||||||||||| ||||||||||||||    
T  40073184 gctctgataccattaagaaattggaagcctaactcatcctca-aaaaccggttcataaggtggagattgtctcctctatataaactcttaccaagagtct 40073086  T
Q  120 tat 122  Q
    |||    
T  40073085 tat 40073083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 15391964 - 15391831
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| ||||||| |||||| |||||||||  || |   ||  ||||||||| ||||||| ||||    
T  15391964 ggcccttgaattcgacaagctctgataccatgttgaaatttggggccttactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttata 15391865  T
Q  102 aacacttaccaagagtcttatctatttgatgtgg 135  Q
     || |||  ||||||||||||||||  |||||||    
T  15391864 tactcttctcaagagtcttatctatccgatgtgg 15391831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 7171846 - 7171743
Alignment:
Q  37 aaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggg 136  Q
    ||||||| || ||||||||| |||| ||||| | |||| ||  |||| ||||||||||||||||||||  |||||||||||||||| ||| | |||||||    
T  7171846 aaattggaggtctaactcatcctta-aaaattgattcttaaggtgagaattgtctcctctatataaacttttaccaagagtcttatatatcttatgtggg 7171748  T
Q  137 acatg 141  Q
    |||||    
T  7171747 acatg 7171743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 29273025 - 29273089
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| |||||||||    
T  29273025 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaa 29273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 47377953 - 47377828
Alignment:
Q  31 ataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttac---caagagtcttatctatt 127  Q
    |||| |||||||| || |||| |||| |||| |||| ||||||  ||  |||||||||||||||||||||||||  |||    ||||||||||||||||     
T  47377953 ataatgaaattggaggtctaattcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactattattatcaagagtcttatctatc 47377855  T
Q  128 tgatgtgggacatgtgtttttcccaat 154  Q
     ||||||||||||| ||||||||||||    
T  47377854 cgatgtgggacatgagtttttcccaat 47377828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 38870942 - 38871061
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| | |||||||||||| ||||||||| ||||||| ||  |||||| || |||| || |||||||  ||| ||||||||||||| || ||||||||    
T  38870942 gaaatttgaggcctaactcatccttacaaaaccggttcttaaggtgaggagtgcctccactttataaacttttatcaagagtcttatcgatctgatgtgg 38871041  T
Q  136 gacat-gtgtttttcccaat 154  Q
    ||| | | ||||||||||||    
T  38871042 gacttggggtttttcccaat 38871061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 40073571 - 40073500
Alignment:
Q  83 ggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||||||||||||||| ||||| |||||||| |||||| |||| || | |||| ||||||||||||    
T  40073571 ggattgtctcctctatataaactcttactaagagtctaatctatctgatatgaggcatgggtttttcccaat 40073500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 52846842 - 52846960
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| ||||| |||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||| || |||  ||||||||||||||||  |||||||    
T  52846842 gaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgg 52846941  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  52846942 gacttgggtttttcccaat 52846960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 12314516 - 12314452
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    ||||||||||||||||| |||||||||||||   ||||||  ||||||||||||| |||||||||    
T  12314516 ggcccttgaattcgacaagctctgataccatgttgaaattcagggcctaactcatccttacaaaa 12314452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 21428226 - 21428378
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| ||||| |||||||   |||||| |||||||||||||| || |||| | ||  |   ||  | ||||||||||||||| ||||    
T  21428226 ggcccttgaattcgacaagctctaataccatgttgaaatttggggcctaactcatcctcacaataccgacttgtaaggtaaggattgtctcctctgtata 21428325  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||| ||||| |||||||| | |||||| | || ||  |||||||||||    
T  21428326 aactcttatcaagaatcttatctttctgatgtagaacttggctttttcccaat 21428378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 29413287 - 29413164
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| ||||| |||| ||| ||||||||| | | ||  ||  ||| || ||| |||||| |||    
T  29413287 tggcccttgaattcgacaagctctgataccatgttgaaatt-ggggcgtaacccatccttacaaaaccagctcataagatgaagagtgtttcctctttat 29413189  T
Q  101 aaacacttaccaagagtcttatcta 125  Q
    |||| |||| |||||||||||||||    
T  29413188 aaactcttatcaagagtcttatcta 29413164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 6237962 - 6238040
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaaga 115  Q
    |||||||| |||||||||||| |||| |||| ||||||  ||  ||||||||||||||||||||||||| |||| |||||    
T  6237962 gaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaaga 6238040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 22892681 - 22892799
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||| |||||||||||||| ||||||||| ||| || |||    ||||| |||||||||| ||||||  || | ||||||||| || |||||||||||    
T  22892681 gaaatttggggcctaactcatccttacaaaaccggcttgtgaggc-gaggagtgtctcctctttataaagtctcatcaagagtctcatttatttgatgtg 22892779  T
Q  135 ggacatgtgtttttcccaat 154  Q
    |||| || ||||||||||||    
T  22892780 ggacttgggtttttcccaat 22892799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 43361545 - 43361656
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||| ||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||    
T  43361545 gaaattgggggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgg 43361644  T
Q  136 gacatgtgtttt 147  Q
    ||| || |||||    
T  43361645 gacttgggtttt 43361656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 39648915 - 39648988
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| ||||||| |||  ||||||||||||||| | |||||||||| || ||||||||||||    
T  39648915 tgaggattgcctcctctttataaactcttctcaagagtcttatcta-tcgatgtgggacttgggtttttcccaat 39648988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40073402 - 40073360
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgg 43  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  40073402 tggctcttgaattcgacaagctctgataccataaagaaattgg 40073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 45395619 - 45395545
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||| || ||||||  ||||||| |||| |||||||||||||||| |||| |||||| || ||||||||||||    
T  45395619 tgaggagtgcctcctcattataaactcttatcaagagtcttatctatctgatatgggacttgggtttttcccaat 45395545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26000200 - 26000136
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    ||||||||||||| || | ||||||||||||||| |||||| |||||||||||||| | |||||||    
T  26000200 tggcccttgaatttgataggctctgataccataatgaaatt-ggggcctaactcatccatacaaaa 26000136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9381245 - 9381181
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaa 65  Q
    ||||| ||||||| |||| |||||||||||||   |||||| |||||||||||||| ||||||||    
T  9381245 tggccattgaatttgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaa 9381181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 10017345 - 10017420
Alignment:
Q  60 tacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||  ||  |||||| ||  |||||| ||||||| |||| |||||||||||||||| ||||||||    
T  10017345 tacaaaatcggttcataaggtgaggagtgcttcctctttataaactcttatcaagagtcttatctatctgatgtgg 10017420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 29413452 - 29413341
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||||||||||||| |||||||||  || ||  ||  |||||| || ||||||| ||||||| |||| |||||||||||||||   || || |||| ||     
T  29413452 ggggcctaactcatccttacaaaactggctcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctacccgaagtaggacttgg 29413353  T
Q  143 gtttttcccaat 154  Q
    ||||||||||||    
T  29413352 gtttttcccaat 29413341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 42845069 - 42845128
Alignment:
Q  91 tcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcc 150  Q
    |||||| ||||||| |||| |||||||||||||||| |||||||| || || ||||||||    
T  42845069 tcctctttataaactcttatcaagagtcttatctatctgatgtggtacttgagtttttcc 42845128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 6238143 - 6238193
Alignment:
Q  97 atataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttt 147  Q
    |||||||| |||||||||||||||||||||  ||| ||||||||| |||||    
T  6238143 atataaactcttaccaagagtcttatctatccgatttgggacatgggtttt 6238193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 11018917 - 11018847
Alignment:
Q  84 gattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||| ||||||| |||  |||||||||||  ||| ||||||||||| ||  |||||||||||    
T  11018917 gattgtctcctctttataaactcttctcaagagtcttagttatctgatgtgggacttgaatttttcccaat 11018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 25799327 - 25799265
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    |||||||||| |||| ||| |||||||||   |||||| |||||||||||||| |||||||||    
T  25799327 cccttgaatttgacaagctttgataccatgttgaaatttggggcctaactcatccttacaaaa 25799265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 48558314 - 48558432
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| ||||| |||||||| ||||||||| ||| |   ||  |||||||||  |||||| |||| || |||  ||||||||||||||||  ||| |||    
T  48558314 gaaatttggggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttatatactcttctcaagagtcttatctatccgatatgg 48558413  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  48558414 gacttgggtttttcccaat 48558432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 20735649 - 20735532
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtct 119  Q
    |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  |||||| || ||||||| ||||||  |||  |||||||      
T  20735649 gctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattcttctcaagagtac 20735550  T
Q  120 tatctatttgatgtggga 137  Q
    ||||||| ||||||||||    
T  20735549 tatctatctgatgtggga 20735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 21428097 - 21428169
Alignment:
Q  82 aggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||| ||||||||| |||| ||||||||||||||||   |||| |||| ||  |||||||||||    
T  21428097 aggattgtcacctttatataaactcttatcaagagtcttatctatccaatgtaggacttgaatttttcccaat 21428169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 47377865 - 47377825
Alignment:
Q  154 tcttatctatccgacgtgagatatgagtttttcccaataca 194  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  47377865 tcttatctatccgatgtgggacatgagtttttcccaataca 47377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 26394667 - 26394544
Alignment:
Q  30 cataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttg 129  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||| ||  ||||||||| ||||||||||||||| |||| ||||||||||||||||  |    
T  26394667 cataatgaaattggaggcctaagtcattctta-aaaatcggttcttaaggtgaggattgcctcctctatataaactcttatcaagagtcttatctatccg 26394569  T
Q  130 atgtgggacatgtgtttttcccaat 154  Q
    |||||| ||||| ||||||||||||    
T  26394568 atgtggaacatgagtttttcccaat 26394544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 16876969 - 16877121
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  16876969 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 16877068  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  16877069 aactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 16877121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 26098482 - 26098335
Alignment:
Q  7 ttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacac 106  Q
    ||||| |||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||||||  ||  |||||| |||||||||| |||||||      
T  26098482 ttgaactcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaacta 26098383  T
Q  107 ttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| || |||||||||||||  |||||||||| || ||||||||||||    
T  26098382 ttatcatgagtcttatctatccgatgtgggacttgggtttttcccaat 26098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 25998957 - 25998810
Alignment:
Q  7 ttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacac 106  Q
    |||||||| ||| |||||||||||||   |||||| ||||||||| |||| ||||||||| ||||||  ||  |||||| |||||||||| |||||||      
T  25998957 ttgaattcaacaagctctgataccatgttgaaatttggggcctaaatcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaacta 25998858  T
Q  107 ttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| || |||||||||||||  |||||||||| || ||||||||||||    
T  25998857 ttatcatgagtcttatctatccgatgtgggacttgggtttttcccaat 25998810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 26098688 - 26098541
Alignment:
Q  7 ttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacac 106  Q
    |||||||||||| | |||||||||||   |||||| |||||||||||||||||||||||| ||||||  ||  |||||| |||||||||| |||||||      
T  26098688 ttgaattcgacaagttctgataccatgttgaaatttggggcctaactcattcttacaaaagcggttcataaggtgaggagtgtctcctctttataaacta 26098589  T
Q  107 ttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| || |||||||||| |   |||||||||| || ||||||||||||    
T  26098588 ttatcatgagtcttatcaagacgatgtgggacttgggtttttcccaat 26098541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 24558729 - 24558576
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||| ||||||||||| |||||||||||||   |||||| |||||||||||||| || |||||| ||| |   ||  ||||||||| ||||||| |||    
T  24558729 tggcccatgaattcgacaagctctgataccatcttgaaatttggggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttat 24558630  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    | || |||  |||||||||||||||| ||||||||||| ||  |||||||||||    
T  24558629 atactcttctcaagagtcttatctatctgatgtgggacttggatttttcccaat 24558576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 11316989 - 11316836
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcgg-ttctgaaattgaggattgtctcctctata 99  Q
    |||||||||||||||||| |||||||||||||   ||||||||||||||||||||  ||||||||| ||| || || || |||||| || | ||||| ||    
T  11316989 tggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcaaccttacaaaaccggcttgtg-aagtgaggagtgccccctcttta 11316891  T
Q  100 taaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||| || | ||||||||| ||||||  ||||||| || || ||||||||||||    
T  11316890 taaactctcatcaagagtctcatctatccgatgtggaacttgagtttttcccaat 11316836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 25999134 - 25999016
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||||||||||||| ||||||  ||  |||||| |||||||||| |||||||  ||| || |||||||||| ||  |||||||    
T  25999134 gaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgatgtgg 25999035  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  25999034 gacttgggtttttcccaat 25999016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 28149904 - 28149786
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||| ||||||| ||||||||  |||||||    
T  28149904 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagttttatctatccgatgtgg 28149805  T
Q  136 gacatgtgtttttcccaat 154  Q
    |||||| ||||||||||||    
T  28149804 gacatgggtttttcccaat 28149786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 26098865 - 26098747
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||||||||||||| ||||||  ||  |||||| |||||||||| |||||||  ||| || |||||||||| ||  ||||| |    
T  26098865 gaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcaatccgatgtag 26098766  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  26098765 gacttgggtttttcccaat 26098747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 5592622 - 5592714
Alignment:
Q  6 cttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctata 99  Q
    |||||||||||||  |||||||||||||| |||||||| || ||||||||| |||| |||| ||||||  || |||||||||||||||||||||    
T  5592622 cttgaattcgacagactctgataccataatgaaattggaggtctaactcatcctta-aaaaccggttcaaaagttgaggattgtctcctctata 5592714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 15102617 - 15102736
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctga-aattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtg 134  Q
    |||||| |||| ||||||||| ||||||||| ||| | ||  || |||||| || ||||||| ||||||| || | ||||||||| ||||||||||||||    
T  15102617 gaaatttggggtctaactcatccttacaaaaccggctttgtgaagtgaggagtgcctcctctttataaactctcatcaagagtctcatctatttgatgtg 15102716  T
Q  135 ggacatgtgtttttcccaat 154  Q
    |||| || ||||||||||||    
T  15102717 ggacttgggtttttcccaat 15102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 15101104 - 15101222
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    ||||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||    
T  15101104 gaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgg 15101203  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| ||  |||||||||||    
T  15101204 gacttggatttttcccaat 15101222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 16590295 - 16590177
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||| ||||||||| ||||||||| ||| |   ||| ||||||||| ||||||| ||||||  ||| ||||||||||| |||||  |||||||    
T  16590295 gaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgg 16590196  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  16590195 gacttgggtttttcccaat 16590177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 16605085 - 16605203
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||| ||||||||| ||||||||| ||| |   ||| ||||||||| ||||||| ||||||  ||| ||||||||||| |||||  |||||||    
T  16605085 gaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgg 16605184  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  16605185 gacttgggtttttcccaat 16605203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 21109930 - 21110083
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa-tcggttctgaaattgaggattgtctcctctata 99  Q
    |||||||||||||||| | |||  |||||||||| |||| || | ||||| ||||| ||||||||| | | || | ||  || |||||| ||||||||||    
T  21109930 tggcccttgaattcgaaaggcttagataccataatgaaactgagagcctagctcatccttacaaaactagcttat-aaggtggggattgcctcctctata 21110028  T
Q  100 taaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||| |||||||||| ||||||||||  || |||||||||| | ||||||||||    
T  21110029 taaactcttaccaagaatcttatctatccgacgtgggacatgggattttcccaat 21110083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19291876 - 19292013
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||| |||  |||||||| |||   |||||| || ||||||||||| ||||||||| |   |   ||  ||||||||||||||||||||     
T  19291876 tggcccttgaattcaacaaactctgatatcatgttgaaatttggagcctaactcatccttacaaaaccaacttataaggtgaggattgtctcctctatac 19291975  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggac 138  Q
    |||| |||| ||||||||||||||||  ||||||||||    
T  19291976 aaactcttatcaagagtcttatctatccgatgtgggac 19292013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 18494441 - 18494501
Alignment:
Q  3 gcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttaca 63  Q
    |||||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||||    
T  18494441 gcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttaca 18494501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 11313359 - 11313493
Alignment:
Q  20 gctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtct 119  Q
    |||||||||||||   |||||| |||||||||||||| |||||||||  || |   ||  ||||||||| ||||||| |||| || |||  |||||||||    
T  11313359 gctctgataccatgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtct 11313458  T
Q  120 tatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||  |||||||||  || ||||||||||||    
T  11313459 tatctatccgatgtgggatttgggtttttcccaat 11313493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12124855 - 12124920
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    |||||||||||||||||||||||||||| |||   |||||| ||||||||||| || |||||||||    
T  12124855 tggcccttgaattcgacatgctctgatatcatgctgaaatttggggcctaacttatccttacaaaa 12124920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 30539381 - 30539244
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| ||| ||||| |||   |||||| ||||||||  |||| ||||||||| ||| |   ||  |||||| ||||||  || |||    
T  30539381 tggcccttgaattcgacaagctatgatagcatgttgaaatttggggcctagttcatccttacaaaaccggcttgtaaggtgaggagtgtctcgcctttat 30539282  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggac 138  Q
    |||| |||| ||||||||||||||||  ||||||||||    
T  30539281 aaactcttatcaagagtcttatctatccgatgtgggac 30539244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 24558899 - 24558781
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| | | |   ||  ||||||||||||||||| ||||||| |||   |||||||||||||||  ||||||     
T  24558899 gaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgtctcctctttataaactcttctaaagagtcttatctatccgatgtga 24558800  T
Q  136 gacatgtgtttttcccaat 154  Q
    |||||  |||||| |||||    
T  24558799 gacataggttttttccaat 24558781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 30526981 - 30526919
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    |||||||||||||||  ||||||||||||   ||||||||||||||||||||  |||||||||    
T  30526981 cccttgaattcgacaaactctgataccatgttgaaattgggggcctaactcaaccttacaaaa 30526919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19712567 - 19712632
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    |||||||||||||||||| | |||||||||||   | |||| |||||||||||||| |||||||||    
T  19712567 tggcccttgaattcgacaagttctgataccatgttgtaatttggggcctaactcatccttacaaaa 19712632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 2923008 - 2923067
Alignment:
Q  95 ctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||| |||| |||||||| |||||||  || |||||||||| ||||||||||||    
T  2923008 ctatataaactcttatcaagagtcatatctatccgacgtgggacatgagtttttcccaat 2923067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 11313548 - 11313583
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaaga 37  Q
    ||||||||||||||||| ||||||||||||||||||    
T  11313548 ggcccttgaattcgacaagctctgataccataaaga 11313583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 12134476 - 12134578
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| |||||   ||  | |||| |||||||||| ||||||| |||  |||||||  |||||||  |||||||    
T  12134476 gaaatttggggcctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatctatccgatgtgg 12134575  T
Q  136 gac 138  Q
    |||    
T  12134576 gac 12134578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 2923033 - 2923070
Alignment:
Q  157 tatctatccgacgtgagatatgagtttttcccaataca 194  Q
    ||||||||||||||| || |||||||||||||||||||    
T  2923033 tatctatccgacgtgggacatgagtttttcccaataca 2923070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 10733431 - 10733519
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatct 124  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  |||||| |||||||||| ||||||| |||  ||||||| ||||||    
T  10733431 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtgttatct 10733519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21109787 - 21109851
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaa 65  Q
    |||||||||||||||| | |||  |||||||||| ||||||| | ||||| ||||| ||||||||    
T  21109787 tggcccttgaattcgaaaggcttagataccataatgaaattgagagcctagctcatccttacaaa 21109851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 8e-27; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 13413725 - 13413577
Alignment:
Q  5 ccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaac 104  Q
    |||||||||||| | |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||||||    
T  13413725 ccttgaattcgaaa-gctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaac 13413627  T
Q  105 acttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     |||  |||||||||||||||||||||||||||| || ||||||||||||    
T  13413626 tcttctcaagagtcttatctatttgatgtgggacttgggtttttcccaat 13413577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 38376876 - 38376724
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||| ||||||| |||||||||||||   | |||| |||||||||||||| ||||||||| ||| |   ||  ||||||||||||||||| ||||    
T  38376876 ggcccttgacttcgacaagctctgataccatgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttata 38376777  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  38376776 aactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaat 38376724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 43490422 - 43490574
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||| ||| |||||||||||||   ||||||||||||||||||||| ||||||||| ||| |  |||  |||| ||||||| |||| ||||    
T  43490422 ggcccttgaattcaacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaaccggcttggaaggtgagtattgtcttctctttata 43490521  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  43490522 aactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 43490574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 40169000 - 40169147
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  |||| |||| ||||||| ||||    
T  40169000 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcctcctctttata 40169099  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttc 149  Q
     || |||  |||||||||||||||| ||||||||||| || |||||||    
T  40169100 tactcttctcaagagtcttatctatctgatgtgggacttgggtttttc 40169147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 48270 - 48420
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  48270 ggcccttgaattcgacaagctctgataccatgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 48369  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||  ||  |||||||||| ||||  | ||||||||| || ||||||||||||    
T  48370 aacttttctcaagagtcttgtcta--taatgtgggacttgggtttttcccaat 48420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 36878472 - 36878319
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| |  |||||| |||| |||||||||| || |   ||  ||||||||||||||| | |||    
T  36878472 tggcccttgaattcgacaagctctgataccatgttgaaatttgaagcctaaatcatccttacaaaattggcttgtaaggtgaggattgtctcctgtttat 36878373  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||| |||| ||| |||||||||||| ||||||||||| |  ||||||||||||    
T  36878372 aaactcttatcaaaagtcttatctatctgatgtgggactttggtttttcccaat 36878319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 2908730 - 2908880
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    ||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||    
T  2908730 cccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaa 2908829  T
Q  104 cacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |  ||  ||| |||||| ||||| ||||||||||| ||  |||||||||||    
T  2908830 ctattctcaaaagtcttgtctatctgatgtgggacttggatttttcccaat 2908880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 3763032 - 3762899
Alignment:
Q  21 ctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtctt 120  Q
    ||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||| ||||| ||||||| ||||||| |||  ||||||||||    
T  3763032 ctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaagattgcctcctctttataaactcttctcaagagtctt 3762933  T
Q  121 atctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||  ||||||||||||| ||||||||||||    
T  3762932 atctatccgatgtgggacatgggtttttcccaat 3762899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 18914327 - 18914479
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||| ||||||||   |||||| |||||||||||||||||||||||| | | |   ||  ||||||||||||||| | ||||    
T  18914327 ggcccttgaattcgacaagctccgataccatgttgaaatttggggcctaactcattcttacaaaaccagcttgtaaggtgaggattgtctcctttttata 18914426  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||  ||  ||||||||||  ||||  |||||||||| || ||||||||||||    
T  18914427 aacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaat 18914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 20720509 - 20720661
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||| | |||||||||||||    ||||| |||| ||||||||| ||||||||| ||| |   ||| |||||| || ||||| | || |    
T  20720509 ggcccttgaattcgataagctctgataccatgttaaaatttggggtctaactcatccttacaaaaccggcttgtaaagtgaggagtgcctcctttttaca 20720608  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||| ||||| |||||||||| ||||||||||| || ||||||||||||    
T  20720609 aactcttatcaagaatcttatctatctgatgtgggacttgagtttttcccaat 20720661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 28358015 - 28358146
Alignment:
Q  23 ctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttat 122  Q
    ||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  ||||||||||||||||| ||||||| |||  |||||||||| |    
T  28358015 ctgataccattttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttgt 28358114  T
Q  123 ctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||  |||||||||| || ||||||||||||    
T  28358115 ctatccgatgtgggacttgggtttttcccaat 28358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 4563685 - 4563802
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||||| |||||| ||||| |||| |||| ||||||  ||  ||||||||||||||||||| ||||| |||| ||| ||||||||||||  ||||||     
T  4563685 gaaattggaggcctacctcatcctta-aaaaccggttcataaggtgaggattgtctcctctatgtaaactcttatcaaaagtcttatctatccgatgtga 4563783  T
Q  136 gacatgtgtttttcccaat 154  Q
    |||||| ||||||||||||    
T  4563784 gacatgagtttttcccaat 4563802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 34457241 - 34457095
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| ||||||||| ||| |   ||  |||||||||  |||||| ||||    
T  34457241 ggcccttgaattcgacaagctctgataccatgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcatcctctttata 34457142  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgttttt 148  Q
    ||| |||  |||||||||| |||||  ||| |||||| || ||||||    
T  34457141 aactcttctcaagagtcttgtctatccgatatgggacttgggttttt 34457095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 48099 - 48215
Alignment:
Q  38 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggga 137  Q
    ||||||||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||||    
T  48099 aattgggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtggga 48198  T
Q  138 catgtgtttttcccaat 154  Q
    | || ||||||||||||    
T  48199 cttgggtttttcccaat 48215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 3015579 - 3015731
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   ||||||  ||||||||||||  ||||||||| ||| |   ||  ||||| ||| ||||||| |||    
T  3015579 tggcccttgaattcgacaagctctgataccatgttgaaatttagggcctaactcaaccttacaaaaccggcttgcaaggtgagggttgcctcctctttat 3015678  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaa 153  Q
     ||| || | ||||||||| ||||||  |||||||||| || |||||||||||    
T  3015679 gaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaa 3015731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 18873231 - 18873306
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaatc 155  Q
    ||||||||| ||||||||||||||| |||| ||| ||||||||||||  ||||||||||||| | |||||||||||    
T  18873231 tgaggattgcctcctctatataaactcttatcaatagtcttatctatccgatgtgggacatgggcttttcccaatc 18873306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 10668427 - 10668353
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||| |||||||||| | ||||| |||| ||||||| |||||||||||||||||||| || ||||||||||||    
T  10668427 tgaggagtgtctcctctttgtaaactcttatcaagagttttatctatttgatgtgggacttgggtttttcccaat 10668353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 21019858 - 21019981
Alignment:
Q  30 cataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttg 129  Q
    ||||| |||||||| ||||||| |||| |||| |||||||||||| ||  |||||||||  || | |||||| || |||| |||||||||||| |||  |    
T  21019858 cataatgaaattggaggcctaagtcatcctta-aaaatcggttcttaaggtgaggattgcttcttttatatagactcttatcaagagtcttatatatccg 21019956  T
Q  130 atgtgggacatgtgtttttcccaat 154  Q
    |||||| ||||| ||||||||||||    
T  21019957 atgtggaacatgagtttttcccaat 21019981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 39268168 - 39268011
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttac----aaaatcggttctgaaattgaggattgtctcctct 96  Q
    |||||||||||||| ||| |||||||||||||   |||||| | |||||||||||| ||||     |||| | ||||  ||  |||||| || ||||| |    
T  39268168 tggcccttgaattcaacaagctctgataccatgttgaaatttgaggcctaactcatccttaattaaaaaaccagttcataaggtgaggagtgcctcctat 39268069  T
Q  97 atataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     ||||||| |||| ||||||||||||||||  |||||||||| || ||||||||||||    
T  39268068 ttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 39268011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 29008140 - 29008065
Alignment:
Q  79 ttgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    |||||||||| || |||||||||||| | || ||||||||||||||||  ||||||| ||||| ||||||||||||    
T  29008140 ttgaggattgccttctctatataaactcctatcaagagtcttatctatccgatgtggaacatgggtttttcccaat 29008065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36307881 - 36308014
Alignment:
Q  1 tggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatat 100  Q
    |||||||||||||||||| |||||||||||||   |||||| | ||| |||||||| ||||||||  ||| |   ||  ||||||||| ||||||| |||    
T  36307881 tggcccttgaattcgacaagctctgataccatgttgaaatttgaggcttaactcatccttacaaatccggcttgcaaggtgaggattgactcctctttat 36307980  T
Q  101 aaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||| |||  ||||||||||||||||  |||||||    
T  36307981 aaactctt-tcaagagtcttatctatccgatgtgg 36308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 43490297 - 43490367
Alignment:
Q  84 gattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||||||| ||||||| |||  ||||||||||||||||  |||||||||| || ||||||||||||    
T  43490297 gattgtctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaat 43490367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 35526983 - 35527092
Alignment:
Q  38 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggga 137  Q
    |||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  ||||||||||||||||  |||||||||    
T  35526983 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtggga 35527082  T
Q  138 catgtgtttt 147  Q
    | || |||||    
T  35527083 cttgggtttt 35527092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 24125207 - 24125055
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||| ||| |||||||||||||   |||||| |||| ||||||||| ||||||||| ||| |   ||  ||||||||  ||||||| ||||    
T  24125207 ggcccttgaattcaacaagctctgataccatgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggattacctcctctttata 24125108  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     || |||  |||||||||| | |||  ||||| |||| || ||||||||||||    
T  24125107 tactcttctcaagagtcttgtttatccgatgtaggacttgggtttttcccaat 24125055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 153
Target Start/End: Complemental strand, 30330749 - 30330643
Alignment:
Q  47 cctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgttt 146  Q
    |||||||||| ||||||||| |||||   ||  ||||||||| ||||||||||||||| || |   ||||||||||||||  |||||||||| ||  |||    
T  30330749 cctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctatataaactctaattcagagtcttatctatccgatgtgggacttggattt 30330650  T
Q  147 ttcccaa 153  Q
    |||||||    
T  30330649 ttcccaa 30330643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 38131875 - 38131773
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| ||| |   ||  |||||| |||||||||| ||||||| |||  |||||||| |||||||  |||||||    
T  38131875 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagtcctatctatccgatgtgg 38131776  T
Q  136 gac 138  Q
    |||    
T  38131775 gac 38131773  T

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Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 28156175 - 28156029
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| | ||||||| |||   |||||| ||||||||| |||| ||||||||| ||| |   ||  ||||||||| ||||||| ||||    
T  28156175 ggcccttgaattcgacaagttctgatatcatgttgaaatttggggcctaattcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttata 28156076  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| ||      ||||||| |||||  |||||||||| || ||||||||||||    
T  28156075 aactct------gagtcttgtctatccgatgtgggacttgggtttttcccaat 28156029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 39268328 - 39268219
Alignment:
Q  45 ggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgt 144  Q
    |||||||||||| |||| |||| ||||||  ||  |||||| || ||||  | ||||||| |||| ||||||| ||||||||  |||||||||| || ||    
T  39268328 ggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctccaatttataaactcttatcaagagttttatctatccgatgtgggacttgggt 39268229  T
Q  145 ttttcccaat 154  Q
    ||||||||||    
T  39268228 ttttcccaat 39268219  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 35527137 - 35527201
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaa 66  Q
    ||||||||||||||||| |||||||||||||   | |||| |||||||||| ||| |||||||||    
T  35527137 ggcccttgaattcgacaagctctgataccatgttgtaatttggggcctaacacatccttacaaaa 35527201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 17135586 - 17135519
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttt 147  Q
    |||||| |||||||||| ||||||| |||| |||||||||||| |||  |||||||||| || |||||    
T  17135586 tgaggagtgtctcctctttataaactcttatcaagagtcttatttatccgatgtgggacttgagtttt 17135519  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 18107937 - 18107826
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||| |||| |||| ||||||||| |||||   ||  |||||| || ||||||| ||||||  |||| ||||||||||||| ||| |||||||||  ||     
T  18107937 ggggtctaattcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaattcttatcaagagtcttatcgattcgatgtgggaattgg 18107838  T
Q  143 gtttttcccaat 154  Q
    ||||||||||||    
T  18107837 gtttttcccaat 18107826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 37656732 - 37656843
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| |||| || |||  ||||||||||||||||  |||||| ||| ||     
T  37656732 ggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttga 37656831  T
Q  143 gtttttcccaat 154  Q
    |||||| |||||    
T  37656832 gttttttccaat 37656843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 37781844 - 37781955
Alignment:
Q  43 ggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgt 142  Q
    |||||||||||||| ||||||||| | | |   ||  ||||||||| ||||||| |||| || |||  ||||||||||||||||  |||||| ||| ||     
T  37781844 ggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttga 37781943  T
Q  143 gtttttcccaat 154  Q
    ||||||||||||    
T  37781944 gtttttcccaat 37781955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 2908599 - 2908673
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| |||||||  ||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  2908599 tgaggattgcctcctctttataaactattctcaagagtcttgtctatccgatgtgggacttgggtttttcccaat 2908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 4563765 - 4563803
Alignment:
Q  154 tcttatctatccgacgtgagatatgagtttttcccaata 192  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  4563765 tcttatctatccgatgtgagacatgagtttttcccaata 4563803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 15286995 - 15286846
Alignment:
Q  6 cttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctc-tatataaac 104  Q
    |||||| |||||| ||||||||||||||  |||||| |||| |||| |||| ||||||||| | | |   ||| |||||||||  ||||| || ||| ||    
T  15286995 cttgaactcgacaagctctgataccatattgaaatttggggtctaattcatccttacaaaaccagcttgtaaagtgaggattgcatcctcttaaatatac 15286896  T
Q  105 acttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
     |||  ||||||||||||||||  |||||| ||| ||  |||||||||||    
T  15286895 tcttctcaagagtcttatctatccgatgtgagacttggatttttcccaat 15286846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 35527269 - 35527386
Alignment:
Q  38 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttacc-aagagtcttatctatttgatgtggg 136  Q
    |||| |||||||||||||| ||||||||| ||| |   ||  ||||||||| ||||||| | ||||| |||  | |||||||||| ||||  ||||||||    
T  35527269 aatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttgtaaactcttctctaagagtcttagctatccgatgtggg 35527368  T
Q  137 acatgtgtttttcccaat 154  Q
    || || ||||||||||||    
T  35527369 acttgggtttttcccaat 35527386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 18107533 - 18107589
Alignment:
Q  98 tataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||| || | ||||||||||||||||  |||||||||| || ||||||||||||    
T  18107533 tataaactctcatcaagagtcttatctatccgatgtgggacttgggtttttcccaat 18107589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 13451 - 13299
Alignment:
Q  2 ggcccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatata 101  Q
    ||||||||||||||||| |||||||||||||   |||||| |||||||||||||| || |||||| ||| |   ||  ||||||||| ||||||| ||||    
T  13451 ggcccttgaattcgacaagctctgataccatgttgaaattcggggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcctcctctttata 13352  T
Q  102 aacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||| |||  |||||||||| |||||  |||||||||| || ||||||||||||    
T  13351 aactcttctcaagagtcttgtctatccgatgtgggacctgagtttttcccaat 13299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 13580 - 13506
Alignment:
Q  80 tgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttcccaat 154  Q
    ||||||||| ||||||| ||||||| |||  |||||||||| |||||  ||| |||||| || ||||||||||||    
T  13580 tgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatttgggacttgggtttttcccaat 13506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 2040 - 2162
Alignment:
Q  4 cccttgaattcgacatgctctgataccataaagaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaa 103  Q
    |||||||||||||||  |||||||| ||| |  ||||| |||||||||||||| |||||||||  || |   ||  ||||||||| ||||||||||||||    
T  2040 cccttgaattcgacaaactctgatagcatgataaaatttggggcctaactcatccttacaaaactggcttgtaaggtgaggattgcctcctctatataaa 2139  T
Q  104 cacttaccaagagtcttatctat 126  Q
    | |||| ||||||| ||||||||    
T  2140 ctcttatcaagagttttatctat 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 2940 - 3058
Alignment:
Q  36 gaaattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtgg 135  Q
    |||||| |||||||||||||| ||||||||| | | |   ||| ||||||||| ||||||| ||||||| |||  |||||||||| |||||  |||||||    
T  2940 gaaatttggggcctaactcatccttacaaaaccagcttgtaaagtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgg 3039  T
Q  136 gacatgtgtttttcccaat 154  Q
    ||| || ||||||||||||    
T  3040 gacttgggtttttcccaat 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 76961 - 76851
Alignment:
Q  38 aattgggggcctaactcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctatttgatgtggga 137  Q
    |||| ||||||||||||||  |||||||| ||| |   ||  ||||||||| ||||||| ||||||| |||  ||||||||||||||||  |||||||||    
T  76961 aatttggggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtggga 76862  T
Q  138 catgtgttttt 148  Q
    | || ||||||    
T  76861 cttgggttttt 76851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1112 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 1245 - 1318
Alignment:
Q  53 tcattcttacaaaatcggttctgaaattgaggattgtctcctctatataaacacttaccaagagtcttatctat 126  Q
    |||||||||||||||| ||| | ||  ||| || ||||| |||| ||||||| |||| ||||||||||||||||    
T  1245 tcattcttacaaaatcagtttttaaggtgatgagtgtcttctctttataaactcttatcaagagtcttatctat 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 15696 - 15760
Alignment:
Q  87 tgtctcctctatataaacacttaccaagagtcttatctatttgatgtgggacatgtgtttttccc 151  Q
    |||||||| | ||||||| |||| ||| | ||||||||||||||||||| || || |||||||||    
T  15696 tgtctcctatttataaactcttatcaaaaatcttatctatttgatgtggtacttgggtttttccc 15760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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