View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4661_low_32 (Length: 227)
Name: NF4661_low_32
Description: NF4661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4661_low_32 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 4132438 - 4132647
Alignment:
| Q |
18 |
ataagctatgagtttgactagctaaaatatttcttgtcaaaaaaccacctcggacccccactgatcaaattctgccatcatatgaaatactccctcactc |
117 |
Q |
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| T |
4132438 |
ataagctatgagtttgactagctaaaatatttcttgtcaaaaaaccacctcggacccccactgatcaaattctgccatgatatgaaatactccctcactc |
4132537 |
T |
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| Q |
118 |
tatatatgcaatccacgccgatttcaattattctccaggactccacaacagttaaaactgctagtattgaaaactcagctaccttgcaaataaaatacgc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4132538 |
tatatatgcaatccacgccgatttcaattattctccaggactccacaacagttaaaactgctagtattgaaaactcagctaccttgcaaataaaatacgc |
4132637 |
T |
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| Q |
218 |
ccacacacta |
227 |
Q |
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| T |
4132638 |
ccacacacta |
4132647 |
T |
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