View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4661_low_8 (Length: 410)

Name: NF4661_low_8
Description: NF4661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4661_low_8
NF4661_low_8
[»] chr7 (7 HSPs)
chr7 (255-401)||(28923164-28923310)
chr7 (21-155)||(28923408-28923544)
chr7 (255-368)||(37490584-37490699)
chr7 (261-335)||(1643339-1643413)
chr7 (300-371)||(30463087-30463160)
chr7 (268-332)||(11616601-11616665)
chr7 (280-312)||(43780141-43780173)
[»] chr4 (19 HSPs)
chr4 (255-370)||(27977173-27977290)
chr4 (255-370)||(43334987-43335104)
chr4 (277-371)||(35909536-35909632)
chr4 (255-321)||(22872403-22872469)
chr4 (255-370)||(28974332-28974449)
chr4 (255-332)||(3686037-3686114)
chr4 (261-370)||(17237075-17237186)
chr4 (256-368)||(38310326-38310438)
chr4 (274-370)||(4360372-4360470)
chr4 (278-370)||(49448890-49448984)
chr4 (255-332)||(39976394-39976471)
chr4 (259-320)||(50328087-50328148)
chr4 (260-366)||(54729452-54729560)
chr4 (277-370)||(18849723-18849818)
chr4 (270-322)||(29136803-29136855)
chr4 (277-332)||(21240941-21240996)
chr4 (255-370)||(38160116-38160233)
chr4 (259-370)||(50714612-50714725)
chr4 (342-371)||(42367904-42367933)
[»] chr1 (19 HSPs)
chr1 (255-370)||(32587791-32587908)
chr1 (255-370)||(27831872-27831987)
chr1 (256-370)||(13500692-13500810)
chr1 (255-332)||(17342854-17342931)
chr1 (257-369)||(37280967-37281077)
chr1 (280-370)||(42926185-42926277)
chr1 (277-371)||(50267402-50267498)
chr1 (255-370)||(51749148-51749265)
chr1 (255-320)||(29225779-29225844)
chr1 (259-315)||(914777-914833)
chr1 (255-370)||(3718815-3718931)
chr1 (255-368)||(8327743-8327858)
chr1 (261-333)||(27391379-27391451)
chr1 (257-370)||(43895875-43895989)
chr1 (278-335)||(1861605-1861662)
chr1 (277-371)||(36467159-36467255)
chr1 (342-370)||(11324348-11324376)
chr1 (342-370)||(11482369-11482397)
chr1 (274-371)||(52830378-52830477)
[»] chr8 (19 HSPs)
chr8 (255-370)||(5962437-5962554)
chr8 (255-370)||(42412347-42412464)
chr8 (256-370)||(5392076-5392192)
chr8 (257-370)||(139050-139165)
chr8 (275-335)||(26570153-26570213)
chr8 (259-371)||(12653717-12653831)
chr8 (262-370)||(32241388-32241498)
chr8 (255-321)||(325131-325197)
chr8 (255-328)||(44615373-44615446)
chr8 (274-333)||(9014748-9014807)
chr8 (278-333)||(15559133-15559188)
chr8 (274-363)||(138672-138761)
chr8 (259-320)||(5423180-5423241)
chr8 (274-315)||(7042797-7042838)
chr8 (255-332)||(21587303-21587380)
chr8 (255-332)||(39171569-39171646)
chr8 (300-369)||(41726592-41726661)
chr8 (258-323)||(44225934-44225999)
chr8 (274-371)||(44790385-44790484)
[»] chr6 (10 HSPs)
chr6 (261-371)||(7301045-7301155)
chr6 (259-367)||(7739485-7739595)
chr6 (255-332)||(14306245-14306322)
chr6 (300-366)||(4238492-4238558)
chr6 (255-332)||(14312652-14312729)
chr6 (274-370)||(31265824-31265922)
chr6 (274-333)||(34915816-34915875)
chr6 (274-320)||(3604616-3604662)
chr6 (255-370)||(30063913-30064030)
chr6 (274-371)||(15081468-15081567)
[»] chr3 (12 HSPs)
chr3 (255-370)||(32023064-32023182)
chr3 (277-370)||(9017849-9017944)
chr3 (277-370)||(39866517-39866612)
chr3 (255-370)||(11251091-11251208)
chr3 (259-333)||(54458312-54458386)
chr3 (255-315)||(9218171-9218231)
chr3 (274-371)||(33994702-33994801)
chr3 (277-370)||(54122188-54122283)
chr3 (274-370)||(54845480-54845578)
chr3 (255-370)||(5245438-5245555)
chr3 (255-320)||(39329766-39329831)
chr3 (342-371)||(54783078-54783107)
[»] chr5 (17 HSPs)
chr5 (255-370)||(11099442-11099559)
chr5 (255-370)||(39183592-39183709)
chr5 (255-371)||(16283551-16283669)
chr5 (274-370)||(35646054-35646152)
chr5 (274-320)||(4475291-4475337)
chr5 (279-370)||(41594812-41594904)
chr5 (274-370)||(6629360-6629455)
chr5 (255-320)||(43573032-43573097)
chr5 (278-370)||(35666934-35667026)
chr5 (270-370)||(4576375-4576476)
chr5 (255-370)||(7311147-7311262)
chr5 (278-370)||(36469059-36469153)
chr5 (256-320)||(35988661-35988725)
chr5 (278-370)||(36446652-36446746)
chr5 (271-317)||(9426572-9426618)
chr5 (255-370)||(17242919-17243036)
chr5 (342-370)||(42870949-42870977)
[»] chr2 (16 HSPs)
chr2 (255-369)||(10069550-10069666)
chr2 (259-370)||(41436109-41436221)
chr2 (270-332)||(20027154-20027216)
chr2 (255-370)||(23684985-23685102)
chr2 (262-370)||(2756707-2756817)
chr2 (262-333)||(3100433-3100504)
chr2 (277-363)||(2882033-2882121)
chr2 (255-328)||(3487420-3487493)
chr2 (275-368)||(565135-565230)
chr2 (255-314)||(883172-883231)
chr2 (257-369)||(7213503-7213617)
chr2 (270-313)||(12524334-12524377)
chr2 (284-322)||(734026-734064)
chr2 (278-332)||(8550646-8550700)
chr2 (281-331)||(44284292-44284342)
chr2 (255-335)||(4794599-4794679)
[»] scaffold0006 (1 HSPs)
scaffold0006 (276-371)||(229870-229966)
[»] scaffold0221 (1 HSPs)
scaffold0221 (259-313)||(8917-8971)
[»] scaffold0034 (1 HSPs)
scaffold0034 (255-370)||(98851-98968)
[»] scaffold0003 (1 HSPs)
scaffold0003 (300-369)||(352428-352497)


Alignment Details
Target: chr7 (Bit Score: 123; Significance: 5e-63; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 255 - 401
Target Start/End: Complemental strand, 28923310 - 28923164
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcattta 354  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  28923310 tcactctcaatttattatcttccactttgcatttataataatggtgaatgcaccaatacttgacaaaatcacttaaaactacatttctctcattcattta 28923211  T
Q  355 tacatttttcttaatactccctcctgtcataaatataagagaataat 401  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||    
T  28923210 tacatttttcttaatactcccttcagccataaatataagagaataat 28923164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 28923544 - 28923408
Alignment:
Q  21 gattggacctattttgttaagtaatcaaaatcttagtaca--gttataaagttgttaaccaattagcaagatcaacttagttcacagctagtcct-attt 117  Q
    |||||||||||||||||||||||||||||||||||  |||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  28923544 gattggacctattttgttaagtaatcaaaatcttaacacaaagttataaagttgttaaccaattagcaagatcaacttagttca-agctagtcctgtttt 28923446  T
Q  118 tattctcccttcgtcccacggtaagtgcgtttttttgt 155  Q
    |||||||||| ||||||||  |||||||||||||||||    
T  28923445 tattctccctccgtcccacaataagtgcgtttttttgt 28923408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 368
Target Start/End: Complemental strand, 37490699 - 37490584
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    ||||| |||||| | ||| ||||||||||||||||| ||| | | |||||||||||||||| | |||| |||||||||| |  ||  | |||| ||||||    
T  37490699 tcactatcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaacacttaaaatcatttttctctctccttcatt 37490600  T
Q  353 tatacatttttcttaa 368  Q
    ||||||||||||||||    
T  37490599 tatacatttttcttaa 37490584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 1643413 - 1643339
Alignment:
Q  261 tcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaatta 335  Q
    |||||||| ||| ||||||||||||||||| || ||   |||||||||||||||| | |||| ||||| ||||||    
T  1643413 tcaatttaatatattccactttgcatttatgattatgaagaatgcaccaatacttaataaaagcactttaaatta 1643339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 30463087 - 30463160
Alignment:
Q  300 gaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaatac 371  Q
    |||||||||||||||| ||||   ||||||||| ||  ||  | ||||||||||||||||||||||||||||||    
T  30463087 gaatgcaccaatacttaacaagtgcacttaaaactatttttctctctcattcatttatacatttttcttaatac 30463160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 11616601 - 11616665
Alignment:
Q  268 attatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    ||||| ||||||||||||| ||| ||| | | |||||||||||||||| |||| | |||||||||    
T  11616601 attatattccactttgcatatatgatagtggagaatgcaccaatacttaacaagagcacttaaaa 11616665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 312
Target Start/End: Original strand, 43780141 - 43780173
Alignment:
Q  280 tttgcatttataataatagtgaatgcaccaata 312  Q
    ||||||||||||||||| |||||||||||||||    
T  43780141 tttgcatttataataatggtgaatgcaccaata 43780173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 27977173 - 27977290
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacattt--atctcattcatt 352  Q
    |||||||||||| | ||| ||||||||||||||||||||| | | |||||||||||||||| |||||| |||||||||| |  |||   ||| ||| |||    
T  27977173 tcactctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaaacacttaaaatcatttttcactctaatttatt 27977272  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  27977273 tatacatttttcttaata 27977290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 43335104 - 43334987
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||||||||| | ||| ||||||||| |||||| |||||| | |||||||| |||| ||||||| | ||||||||||||  ||  |||  ||||||||    
T  43335104 tcactctcaattcaatatattccactttccatttaaaataatggagaatgcactaatatttgacaagaacacttaaaattatttttctattacattcatt 43335005  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  43335004 tatacatttttcttaata 43334987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 277 - 371
Target Start/End: Complemental strand, 35909632 - 35909536
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatct--cattcatttatacatttttcttaatac 371  Q
    |||||| ||||||||||| | |  ||||||||||||||| |||||  ||||||||||||  |||||||  |||||||||||||||||||||||||||    
T  35909632 cactttacatttataatagtggaaaatgcaccaatacttaacaaatacacttaaaattatttttatctttcattcatttatacatttttcttaatac 35909536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 22872469 - 22872403
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaa 321  Q
    |||||||||||| | ||| ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  22872469 tcactctcaattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaa 22872403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 28974332 - 28974449
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatct--cattcatt 352  Q
    ||||||||| || | ||| |||| |||||||||||| ||||| | |||||||||||||||| |||| | |||||||||  || |||||||  | ||||||    
T  28974332 tcactctcatttcaatatattcccctttgcatttatgataatggagaatgcaccaatacttaacaacaacacttaaaaccacttttatctccctttcatt 28974431  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||| ||||||||    
T  28974432 tatacatttgtcttaata 28974449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 3686037 - 3686114
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||||||||||| | ||| ||| ||||||||||||||||| | | |||||||||||||||| ||||||  ||||||||    
T  3686037 tcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtacttaaaa 3686114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 370
Target Start/End: Original strand, 17237075 - 17237186
Alignment:
Q  261 tcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttataca 358  Q
    |||||| | ||| ||||||||||||||||| ||| ||  |||| ||| ||||||| |||||||||||||||| ||  ||  | |||| |||||||||| |    
T  17237075 tcaattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttatata 17237174  T
Q  359 tttttcttaata 370  Q
    ||||||||||||    
T  17237175 tttttcttaata 17237186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 368
Target Start/End: Complemental strand, 38310438 - 38310326
Alignment:
Q  256 cactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttat 355  Q
    |||||||  |||| ||||||| ||||||||||||| || ||  |||||||||||||| |||||||    ||||||||| |  ||| |||| |||| ||||    
T  38310438 cactctcgttttaatatcttcaactttgcatttatgatcatgatgaatgcaccaataattgacaatgaaacttaaaatcatttttctctctttcacttat 38310339  T
Q  356 acatttttcttaa 368  Q
    |||||||||||||    
T  38310338 acatttttcttaa 38310326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 4360470 - 4360372
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatc--tcattcatttatacatttttcttaata 370  Q
    |||||||||||||||||  || | | |||||||||||||||| |||||| |||||||||  |  ||| ||  |||||||||||||| ||||||||||||    
T  4360470 ttccactttgcatttatgctagtggagaatgcaccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatacttttttcttaata 4360372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 370
Target Start/End: Original strand, 49448890 - 49448984
Alignment:
Q  278 actttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaata 370  Q
    ||||||||||||| ||||||| |||||||| |||||||||||| | |||||||||  |  ||  | |||| |||| |||||||||||||||||||    
T  49448890 actttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcacttatacatttttcttaata 49448984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 39976471 - 39976394
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||||||||||| | ||| ||||||||||||||| ||| | | | |||||||||||||||| |||| | |||||||||    
T  39976471 tcactctcaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaa 39976394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 50328148 - 50328087
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaa 320  Q
    |||||||| | ||| || |||||||||||||| ||| | |||||||||||||||||||||||    
T  50328148 tctcaattcaatatatttcactttgcatttatgatagtggtgaatgcaccaatacttgacaa 50328087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 366
Target Start/End: Complemental strand, 54729560 - 54729452
Alignment:
Q  260 ctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatac 357  Q
    ||||||| | ||| ||||||||||||||||| ||| | | |||| ||| ||||||| |||||| ||||||||| ||  ||  | |||| |||||||||||    
T  54729560 ctcaattcaatatattccactttgcatttatgatagtggagaatacactaatacttaacaaaaacacttaaaactatttttctctctctttcatttatac 54729461  T
Q  358 atttttctt 366  Q
    |||||||||    
T  54729460 atttttctt 54729452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 370
Target Start/End: Complemental strand, 18849818 - 18849723
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaata 370  Q
    |||||||||||||| ||| | | |||||||||||||||| |||| | |||||||||  | |||  | |||| ||||||||||||||| ||||||||    
T  18849818 cactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaaccatatttctttctccttcatttatacatttgtcttaata 18849723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 29136855 - 29136803
Alignment:
Q  270 tatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaa 322  Q
    ||||||||||||||||||||| ||||  |||||||||||  ||||||||||||    
T  29136855 tatcttccactttgcatttatgataaaggtgaatgcacccgtacttgacaaaa 29136803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 21240941 - 21240996
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||||||||||||| ||||| ||||||  ||||||||||||||| | |||||||||    
T  21240941 cactttgcatttatgataatggtgaattgaccaatacttgacaagagcacttaaaa 21240996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 38160233 - 38160116
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||||||||| | ||| || ||||||| |||||| ||||| | ||||||| ||||| ||||||||  |||||||||  |  ||  | |||| || |||    
T  38160233 tcactctcaattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagacacttaaaacaatttttctctctcctttatt 38160134  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  38160133 tatacatttttcttaata 38160116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 370
Target Start/End: Original strand, 50714612 - 50714725
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatc--tcattcatttata 356  Q
    |||||||| | ||| |||||||||  |||||| ||||| |||||||||| | |||||||||| | ||||||||| ||  | ||||  || |||| |||||    
T  50714612 tctcaattcaatatattccactttcaatttatgataatggtgaatgcactactacttgacaagagcacttaaaactatttatatccctctttcacttata 50714711  T
Q  357 catttttcttaata 370  Q
     |||||||||||||    
T  50714712 aatttttcttaata 50714725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 371
Target Start/End: Original strand, 42367904 - 42367933
Alignment:
Q  342 tctcattcatttatacatttttcttaatac 371  Q
    ||||||||||||||||||||||||||||||    
T  42367904 tctcattcatttatacatttttcttaatac 42367933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 32587791 - 32587908
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctca--ttcatt 352  Q
    |||||||||||| | ||| || |||||||||||||| ||||| |  |||||| |||||||| |||||| ||||||||||||  ||| |||||  ||||||    
T  32587791 tcactctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacacttaaaattatttttctctcaccttcatt 32587890  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  32587891 tatacatttttcttaata 32587908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 27831872 - 27831987
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcattta 354  Q
    |||||| ||||| | ||||||||||||||||||||| ||||| |||||||||||||||||||||||   ||||||||| ||  ||| |||| |||| | |    
T  27831872 tcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctctctttcactca 27831971  T
Q  355 tacatttttcttaata 370  Q
    | || |||||||||||    
T  27831972 tgcacttttcttaata 27831987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 13500810 - 13500692
Alignment:
Q  256 cactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa----ttacatttatctcattcat 351  Q
    ||||| ||||| | ||| ||||||||||||||||| ||| |   |||||||||||||| | |||||| |||||||||    ||   ||| ||||||||||    
T  13500810 cactcccaattcaatattttccactttgcatttatgatagtgaagaatgcaccaatacataacaaaagcacttaaaatcatttctctttctctcattcat 13500711  T
Q  352 ttatacatttttcttaata 370  Q
    |||||||||||||||||||    
T  13500710 ttatacatttttcttaata 13500692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 17342854 - 17342931
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||||||||||| | ||| || ||||||| |||||| ||||| | |||||||||||||||| |||||| |||||||||    
T  17342854 tcactctcaattcaatatatttcactttgtatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaa 17342931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 369
Target Start/End: Complemental strand, 37281077 - 37280967
Alignment:
Q  257 actctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttata 356  Q
    |||| ||||| | ||| ||| ||||| ||||||| |||| |  ||||||||||||||||||||||  |||| |||||  ||||| |||| |||||||| |    
T  37281077 actcccaattcaatatattctactttacatttatgataaaaaagaatgcaccaatacttgacaaagacactcaaaat--catttctctctttcatttaca 37280980  T
Q  357 catttttcttaat 369  Q
    |||||||||||||    
T  37280979 catttttcttaat 37280967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 370
Target Start/End: Original strand, 42926185 - 42926277
Alignment:
Q  280 tttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatct--cattcatttatacatttttcttaata 370  Q
    ||||||||||| ||| | | ||||||||| |||||| |||||| |||||||||| |  ||| |||  ||||||||||||||||||||||||||    
T  42926185 tttgcatttatgatagtggagaatgcaccgatacttaacaaaaacacttaaaatcatttttctctttcattcatttatacatttttcttaata 42926277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 371
Target Start/End: Complemental strand, 50267498 - 50267402
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctca--ttcatttatacatttttcttaatac 371  Q
    |||||| ||||||| ||||| | |||||||||||||||| ||||   ||||||||| ||  ||| |||||  |||||||||||||||||||||||||    
T  50267498 cactttacatttatgataatggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctcactttcatttatacatttttcttaatac 50267402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 51749265 - 51749148
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||| ||||| | ||| ||||||||||||||||| ||||| | ||||  |||||||||| |||| | |||||||||| |  ||  | |||| ||||||    
T  51749265 tcactcccaattcaatatattccactttgcatttatgataatggagaataaaccaatacttaacaagaacacttaaaatcagttttctctctccttcatt 51749166  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||| ||||||||    
T  51749165 tatacatttatcttaata 51749148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 29225779 - 29225844
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaa 320  Q
    |||||| ||||| | ||| ||| ||||||||||||| |||| | ||||||||||||||||||||||    
T  29225779 tcactcccaattcaatatattctactttgcatttatgataagaatgaatgcaccaatacttgacaa 29225844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 914777 - 914833
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatactt 315  Q
    |||||||| | |||||||||||||| |||||||||| | ||||||||| ||||||||    
T  914777 tctcaattcaatatcttccactttgtatttataatattcgtgaatgcatcaatactt 914833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 3718931 - 3718815
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctc-attcattt 353  Q
    |||||||||||| | ||| ||  ||||| ||||||| |||||  | ||||||| |||||||||||| | ||||||||| ||  ||| ||||  ||||||     
T  3718931 tcactctcaattcaatatattatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactatttttctctctcttcatta 3718832  T
Q  354 atacatttttcttaata 370  Q
    |||||||||||||||||    
T  3718831 atacatttttcttaata 3718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 368
Target Start/End: Original strand, 8327743 - 8327858
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctc--attcatt 352  Q
    |||||||||||| | ||| ||||| ||||||||||| |||   | ||||  |||||||||| |||| | ||||||||||||  ||| ||||  |||||||    
T  8327743 tcactctcaattcaatatattccattttgcatttatgataggggagaatagaccaatacttaacaagagcacttaaaattatttttctctctcattcatt 8327842  T
Q  353 tatacatttttcttaa 368  Q
    ||||||||| ||||||    
T  8327843 tatacatttgtcttaa 8327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 27391379 - 27391451
Alignment:
Q  261 tcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat 333  Q
    |||||| | ||| ||||||||||||||||| |||||||| |||| |||||||||| | || | ||||||||||    
T  27391379 tcaattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaat 27391451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 370
Target Start/End: Original strand, 43895875 - 43895989
Alignment:
Q  257 actctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt-tatctcattcatttat 355  Q
    |||||||||| | ||| ||| ||||||||||||| ||| | | |||  ||||||||||| |||||| ||| ||||| ||  || | |||| ||||| |||    
T  43895875 actctcaattcaatatattcaactttgcatttatgatagtggagaacacaccaatacttaacaaaaacacataaaactattttctctctctttcatctat 43895974  T
Q  356 acatttttcttaata 370  Q
    |||||||||||||||    
T  43895975 acatttttcttaata 43895989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 1861605 - 1861662
Alignment:
Q  278 actttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaatta 335  Q
    ||||| ||||||| |||||| |||||||| ||||||| |||||||  |||||||||||    
T  1861605 actttacatttatgataataatgaatgcatcaatactagacaaaaatacttaaaatta 1861662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 371
Target Start/End: Complemental strand, 36467255 - 36467159
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaatac 371  Q
    |||||| ||||||| ||| | | |||| ||||||||||| ||||   ||||||||| ||  ||  | ||||||||||||||||||||||||||||||    
T  36467255 cactttacatttatcatagtggagaatccaccaatacttaacaagtgcacttaaaactatttttctctctcattcatttatacatttttcttaatac 36467159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 370
Target Start/End: Original strand, 11324348 - 11324376
Alignment:
Q  342 tctcattcatttatacatttttcttaata 370  Q
    |||||||||||||||||||||||||||||    
T  11324348 tctcattcatttatacatttttcttaata 11324376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 370
Target Start/End: Original strand, 11482369 - 11482397
Alignment:
Q  342 tctcattcatttatacatttttcttaata 370  Q
    |||||||||||||||||||||||||||||    
T  11482369 tctcattcatttatacatttttcttaata 11482397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 52830477 - 52830378
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctca--ttcatttatacatttttcttaatac 371  Q
    ||||||||| ||||||| ||| | |  ||||||||||||||| |||||  |||| |||||||  ||| ||||   ||||||||||||||||| |||||||    
T  52830477 ttccactttacatttatgatagtggaaaatgcaccaatacttaacaaatgcactcaaaattatttttctctctccttcatttatacattttttttaatac 52830378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 5962554 - 5962437
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa--ttacatttatctcattcatt 352  Q
    |||||| ||||| | ||| ||||||||||||||||||||| | | |||||||||||||||| |||||| |||||||||  ||   | |||||| ||||||    
T  5962554 tcactcccaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaacgttttttctatctccttcatt 5962455  T
Q  353 tatacatttttcttaata 370  Q
    |||||||||| |||||||    
T  5962454 tatacattttccttaata 5962437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 42412464 - 42412347
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||| ||||| | ||| ||||||||||||||||| ||||| | |||||||||||||  |||||| | ||||||||| ||  ||  | ||||||||| |    
T  42412464 tcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatatatgacaagagcacttaaaactatttttctctctcattcact 42412365  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  42412364 tatacatttttcttaata 42412347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 370
Target Start/End: Original strand, 5392076 - 5392192
Alignment:
Q  256 cactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcattt 353  Q
    ||||| ||||| | ||| ||||||||||||||||| ||| | | ||||||||||||||||||||||| |||||||||  |  ||  | |||| |||||||    
T  5392076 cactcccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcacttaaaaccatttttctctctccttcattt 5392175  T
Q  354 atacatttttcttaata 370  Q
    |||||||| ||||||||    
T  5392176 atacatttgtcttaata 5392192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 370
Target Start/End: Original strand, 139050 - 139165
Alignment:
Q  257 actctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacattta--tctcattcattta 354  Q
    |||| ||||| ||||| ||||||||||||||||| |||   |  ||||||||||||||| |||| |  | ||||||| |  ||||  |||||||||||||    
T  139050 actcacaattcattatattccactttgcatttatgatagcggaaaatgcaccaatacttaacaagagaatttaaaatcatttttatctctcattcattta 139149  T
Q  355 tacatttttcttaata 370  Q
    ||||||||||||||||    
T  139150 tacatttttcttaata 139165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 26570213 - 26570153
Alignment:
Q  275 tccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaatta 335  Q
    |||||||||||||||| |||||   ||||||| |||||||||||||||||||| |||||||    
T  26570213 tccactttgcatttatgataatgacgaatgcatcaatacttgacaaaatcactcaaaatta 26570153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 12653717 - 12653831
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctc--attcatttata 356  Q
    |||||||| | ||| ||||||||| ||||||||||| | |  |||||||||||| || |||||  ||||||||| ||  ||| ||||   ||||||||||    
T  12653717 tctcaattcaatatattccactttacatttataatagtggataatgcaccaatatttaacaaacgcacttaaaactatttttctctctacttcatttata 12653816  T
Q  357 catttttcttaatac 371  Q
    |||||||||||||||    
T  12653817 catttttcttaatac 12653831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 370
Target Start/End: Complemental strand, 32241498 - 32241388
Alignment:
Q  262 caatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacattta--tctcattcatttatacat 359  Q
    ||||| ||||| ||||||||||||||||| ||| |   ||||||| |||||||| |||| | |||||||||| |  ||||  |||| |||||||||||||    
T  32241498 caattcattatattccactttgcatttatgatagtgaagaatgcatcaatacttaacaagaacacttaaaatcatttttatctctccttcatttatacat 32241399  T
Q  360 ttttcttaata 370  Q
    || ||||||||    
T  32241398 ttgtcttaata 32241388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 325197 - 325131
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaa 321  Q
    |||||||||||| | ||| |||||||||  |||||| ||||  ||||||||||||||||||||||||    
T  325197 tcactctcaattcaatatattccactttatatttatgataacggtgaatgcaccaatacttgacaaa 325131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 44615446 - 44615373
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcactt 328  Q
    |||||||||||| | ||| ||| ||||||||||||||||| | | |||| ||||||||||| |||||| |||||    
T  44615446 tcactctcaattcaatatattctactttgcatttataatagtggagaattcaccaatacttaacaaaaacactt 44615373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 333
Target Start/End: Original strand, 9014748 - 9014807
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat 333  Q
    ||||||||||||||||| ||| | | ||||||| |||||||| |||||| ||||||||||    
T  9014748 ttccactttgcatttatgatagtggagaatgcatcaatacttaacaaaagcacttaaaat 9014807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 15559188 - 15559133
Alignment:
Q  278 actttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat 333  Q
    ||||||||||||| ||||| || ||| |||||||||||||||| | ||||||||||    
T  15559188 actttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaat 15559133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 363
Target Start/End: Complemental strand, 138761 - 138672
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttatacattttt 363  Q
    ||||||||||||||||| |||  ||  ||| ||||||||| | |||||| |||||||||| |  ||| |||  |||||||||||||||||    
T  138761 ttccactttgcatttatgatagaagaaaatccaccaatacataacaaaaacacttaaaatcatttttctcttcttcatttatacattttt 138672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 5423241 - 5423180
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaa 320  Q
    |||||||| | |||||||||||||| |||||| ||||| || ||| ||||||| ||||||||    
T  5423241 tctcaattcaatatcttccactttgtatttatgataatggtaaatacaccaatgcttgacaa 5423180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 7042797 - 7042838
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatactt 315  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||    
T  7042797 ttccactttacatttatgataatagagaatgcaccaatactt 7042838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 21587303 - 21587380
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||||| ||||| | ||| ||||||||||||||| ||| | | | |||||||||||||||| |||| | |||||||||    
T  21587303 tcactcccaattcaatatattccactttgcatttctaacagtggagaatgcaccaatacttaacaagagcacttaaaa 21587380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 39171569 - 39171646
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||||| ||||| | ||| ||||||||||||||||| ||| |||  |||||| |||||||| ||||||  ||||||||    
T  39171569 tcactcacaattcaatatattccactttgcatttatgatagtagataatgcatcaatacttaacaaaagtacttaaaa 39171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 41726592 - 41726661
Alignment:
Q  300 gaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttatacatttttcttaat 369  Q
    ||||||| |||||||||| |||  |||| |||| || |||| |||| ||| |||||||||||||||||||    
T  41726592 gaatgcaacaatacttgaaaaaggcactcaaaactatatttctctctttcttttatacatttttcttaat 41726661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 44225999 - 44225934
Alignment:
Q  258 ctctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaat 323  Q
    ||||| ||||| ||| ||| ||||||||||||| || | | ||||||||||||||||| |||||||    
T  44225999 ctctctatttaatatattctactttgcatttatgatgaaaatgaatgcaccaatacttaacaaaat 44225934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 44790484 - 44790385
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaatac 371  Q
    ||||||||| ||||||| ||| | | |||||||||||||||| ||||   ||||||||| ||  ||  | |||| ||||||||||||||| |||||||||    
T  44790484 ttccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaactatttttctctctccttcatttatacatttgtcttaatac 44790385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 371
Target Start/End: Complemental strand, 7301155 - 7301045
Alignment:
Q  261 tcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttatacatt 360  Q
    |||||| | ||| ||||||||| ||||||| ||||| | |||||||| ||||||| |||||  ||||||||| ||  ||| ||||||| |||||||||||    
T  7301155 tcaattcaatatattccactttacatttatgataatggagaatgcacaaatacttaacaaacacacttaaaactatttttctctcatttatttatacatt 7301056  T
Q  361 tttcttaatac 371  Q
    |||||||||||    
T  7301055 tttcttaatac 7301045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 7739595 - 7739485
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttata 356  Q
    |||||||| | ||||||| ||||| ||||||||||||| ||||||||| |||||||| |||||| || || ||| ||  ||  |||||| |||| |||||    
T  7739595 tctcaattcaatatcttctactttacatttataataatggtgaatgcatcaatacttaacaaaaacattttaaactatttttctatctctttcacttata 7739496  T
Q  357 catttttctta 367  Q
    |||||||||||    
T  7739495 catttttctta 7739485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 14306322 - 14306245
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||||||||||||| ||  || |||||| ||||||| ||||| | |||||||||||||||| |||||| |||||||||    
T  14306322 tcactctcaatttaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaa 14306245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 366
Target Start/End: Original strand, 4238492 - 4238558
Alignment:
Q  300 gaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttatacatttttctt 366  Q
    |||||||||||||||| |||| | ||||||||| || |||| |||| ||||||||||||||| ||||    
T  4238492 gaatgcaccaatacttaacaagagcacttaaaactatatttctctctttcatttatacatttatctt 4238558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 332
Target Start/End: Complemental strand, 14312729 - 14312652
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||||||||||| | ||  || |||||| ||||||| ||||| | |||||||||||||||| |||||| |||||||||    
T  14312729 tcactctcaattcaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacacttaaaa 14312652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 370
Target Start/End: Original strand, 31265824 - 31265922
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaata 370  Q
    ||||||||| ||||||| ||| | | |||||||||||||||| |||| | ||||||||| ||  ||  | |||| ||||||||||||||| ||||||||    
T  31265824 ttccactttacatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaactatttttctctctccttcatttatacatttgtcttaata 31265922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 34915875 - 34915816
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat 333  Q
    ||||||||||||||||| ||||| | |||||||||||||||| ||  || ||||||||||    
T  34915875 ttccactttgcatttatgataatggagaatgcaccaatacttaacgtaaacacttaaaat 34915816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 3604662 - 3604616
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaa 320  Q
    |||||||||||||||| |||||| | |||||||||||||||| ||||    
T  3604662 ttccactttgcatttacaataatggagaatgcaccaatacttaacaa 3604616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 30064030 - 30063913
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa--ttacatttatctcattcatt 352  Q
    |||||| ||||| | ||| ||||||||||||||||||||| | | |||| ||| ||||||| | |||| |||||||||  ||   | | |||| ||||||    
T  30064030 tcactcccaattcaatatattccactttgcatttataatagtggagaatacacaaatacttaataaaagcacttaaaactttttttctttctccttcatt 30063931  T
Q  353 tatacatttttcttaata 370  Q
    |||||||||| |||||||    
T  30063930 tatacattttccttaata 30063913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 15081468 - 15081567
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctca--ttcatttatacatttttcttaatac 371  Q
    ||||||||| | ||||| ||| | | |||||||| ||||||| ||||   ||||||||| ||  ||| |||||  |||||||||||||||||||||||||    
T  15081468 ttccactttacgtttatgatagtggagaatgcacaaatacttaacaagtgcacttaaaactatttttctctcaccttcatttatacatttttcttaatac 15081567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 32023182 - 32023064
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa-ttacatt--tatctcattcat 351  Q
    |||||||||||| | ||| ||| ||||||||||||||||| | | |||||||||||||||| ||||||  |||||||| |||  ||  |||||| |||||    
T  32023182 tcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatacttaacaaaagtacttaaaacttatttttctatctccttcat 32023083  T
Q  352 ttatacatttttcttaata 370  Q
    ||||||||||| |||||||    
T  32023082 ttatacattttccttaata 32023064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 370
Target Start/End: Original strand, 9017849 - 9017944
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaata 370  Q
    |||||||||||||||||| | | |||||||||||||||| |||||| ||||||||| ||  ||  | |||| ||||||||||||||||| ||||||    
T  9017849 cactttgcatttataatagtggagaatgcaccaatacttaacaaaagcacttaaaactatttttctctctctttcatttatacattttttttaata 9017944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 370
Target Start/End: Complemental strand, 39866612 - 39866517
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatc--tcattcatttatacatttttcttaata 370  Q
    |||||||||||||| ||| | | |||| ||||||||||| |||||||||||||||| ||  ||| ||  || ||||||||||||||||||||||||    
T  39866612 cactttgcatttatgatagtggagaatacaccaatacttaacaaaatcacttaaaactatttttctctttccttcatttatacatttttcttaata 39866517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 11251208 - 11251091
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat--tacatttatctcattcatt 352  Q
    |||||| ||||||| |||  | || ||||||||||| ||| | | |||||||||||||||| |||| | ||||||||||  |   ||| |||||||||||    
T  11251208 tcactcacaatttaatatagttcaatttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttttctctcattcatt 11251109  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  11251108 tatacatttttcttaata 11251091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 54458386 - 54458312
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat 333  Q
    |||||||| | ||| ||||||||| ||||||| ||||| | ||||||||| |||||| |||||||||||||||||    
T  54458386 tctcaattcaatatattccactttacatttatgataatggagaatgcacccatacttaacaaaatcacttaaaat 54458312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 9218171 - 9218231
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatactt 315  Q
    |||||||||||| ||||| ||| ||||||||||||| |||| |  ||||||||||||||||    
T  9218171 tcactctcaattcattatattctactttgcatttatgataagaaagaatgcaccaatactt 9218231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 33994702 - 33994801
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaatac 371  Q
    ||||||||| ||||||| ||| | | |||||||||||||||| ||||   ||||||||||||  ||  | |||| |||||||||||||||||||| ||||    
T  33994702 ttccactttacatttatgatagtggagaatgcaccaatacttaacaagtgcacttaaaattatttttctctctccttcatttatacatttttcttgatac 33994801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 370
Target Start/End: Complemental strand, 54122283 - 54122188
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaata 370  Q
    |||||||||||||| ||| | | |||||||||||||||| |||||| || |||||| ||  ||  | |||| ||||||||||||||| ||||||||    
T  54122283 cactttgcatttatgatagtggagaatgcaccaatacttaacaaaaacatttaaaactatttttctctctccttcatttatacatttgtcttaata 54122188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 54845578 - 54845480
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaata 370  Q
    ||||||||||||||||| ||| ||| ||||||| | || ||| |||||| ||||||||| ||  ||  | |||| ||||||||||||| ||||||||||    
T  54845578 ttccactttgcatttatgatactagagaatgcatcgatccttaacaaaaacacttaaaactatttttctctctccttcatttatacatatttcttaata 54845480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 5245438 - 5245555
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||||||||| | ||| |||||||||| |||||| ||| | | |||| ||||||||||| |||| | ||||||||| ||  ||  | |||| |||||     
T  5245438 tcactctcaattcaatatattccactttgtatttatgatattggagaatacaccaatacttaacaagagcacttaaaactatttttctctctccttcatg 5245537  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||| ||||||||    
T  5245538 tatacatttgtcttaata 5245555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 39329831 - 39329766
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaa 320  Q
    |||||||||||| | ||| ||| ||||||||||||| |||| |  |||||||||||||||| ||||    
T  39329831 tcactctcaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaa 39329766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 371
Target Start/End: Original strand, 54783078 - 54783107
Alignment:
Q  342 tctcattcatttatacatttttcttaatac 371  Q
    ||||||||||||||||||||||||||||||    
T  54783078 tctcattcatttatacatttttcttaatac 54783107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 11099559 - 11099442
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||| ||||| | ||| |||||||||| |||||| ||| | | |||||||||||||||| |||||| ||||||||| ||  ||  | |||| ||||||    
T  11099559 tcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacacttaaaactatttttctctctctttcatt 11099460  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  11099459 tatacatttttcttaata 11099442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 39183709 - 39183592
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctc--attcatt 352  Q
    |||||||||||| | ||| ||||||||||||||||| ||| | | |||| || |||||||| || ||| |||||||||| |  ||||||||   ||||||    
T  39183709 tcactctcaattcaatatattccactttgcatttatgatagtggagaattcatcaatacttaacgaaagcacttaaaatcatttttatctctttttcatt 39183610  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  39183609 tatacatttttcttaata 39183592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 16283669 - 16283551
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa--ttacatttatctcattcatt 352  Q
    |||||||||||| | ||| ||||||||||||||||| ||| | | |||||||||||||| | ||||||||| ||||||   |   ||| |||| ||||||    
T  16283669 tcactctcaattcaatatattccactttgcatttatgatagttgagaatgcaccaatacataacaaaatcatttaaaaccatttttttctctccttcatt 16283570  T
Q  353 tatacatttttcttaatac 371  Q
    ||||||||||| |||||||    
T  16283569 tatacattttttttaatac 16283551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 35646152 - 35646054
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaata 370  Q
    ||||||||||||||||| ||| | | |||||||||||||||| |||| |||||||||||| |  ||  | ||||||||||||||| |||| ||||||||    
T  35646152 ttccactttgcatttatgatagtggagaatgcaccaatacttaacaagatcacttaaaatcatttttctctctcattcatttatatatttgtcttaata 35646054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 4475291 - 4475337
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaa 320  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  4475291 ttccactttgcatttatgataatggtgaatgcaccaatacttgacaa 4475337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 370
Target Start/End: Complemental strand, 41594904 - 41594812
Alignment:
Q  279 ctttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaata 370  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| || |||||||||  ||  | ||||||||| ||||| |||||||||||||    
T  41594904 ctttgcatttatgataatggtgaatg-accaatacttgacaaaaacatttaaaattatttttctctctcattcacttatatatttttcttaata 41594812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 370
Target Start/End: Complemental strand, 6629455 - 6629360
Alignment:
Q  274 ttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttataca-tttttcttaata 370  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||| | |||| |||| ||  ||| |||| |||||||||||| ||||||||||||    
T  6629455 ttccactttgcatttataataaaaaagaatgcaccaatacttgacaaga-cactcaaaacta-ttttctctctttcatttatacactttttcttaata 6629360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 43573032 - 43573097
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaa 320  Q
    |||||| ||||| | ||||| ||||||||||||||| || || |||||||||||||||||||||||    
T  43573032 tcactcccaattcaatatctcccactttgcatttatgatcatggtgaatgcaccaatacttgacaa 43573097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 370
Target Start/End: Original strand, 35666934 - 35667026
Alignment:
Q  278 actttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttatacatttttcttaata 370  Q
    |||||| |||||||||||| || ||||||||||||||| | |||| ||||||||| ||  ||| |||| |||| | ||| |||||||||||||    
T  35666934 actttgtatttataataatggtaaatgcaccaatacttaagaaaagcacttaaaactatttttctctccttcaataataaatttttcttaata 35667026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 370
Target Start/End: Complemental strand, 4576476 - 4576375
Alignment:
Q  270 tatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatc--tcattcatttatacatttttctta 367  Q
    ||||||||| ||||||||||| ||||| |||| |||||||||||||||||| | ||||||||| |   ||| ||  |  |||||||||||||||||||||    
T  4576476 tatcttccattttgcatttatgataatggtga-tgcaccaatacttgacaagaacacttaaaactgtttttctctttttttcatttatacatttttctta 4576378  T
Q  368 ata 370  Q
    |||    
T  4576377 ata 4576375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 7311262 - 7311147
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcattta 354  Q
    ||||||| |||| | ||| ||| ||||||||||||| ||||| || ||||||| ||||||||| || | |||||||||  |  ||| |||| || ||| |    
T  7311262 tcactcttaattcaatatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccatttttctctcttttattaa 7311163  T
Q  355 tacatttttcttaata 370  Q
    ||||||||||||||||    
T  7311162 tacatttttcttaata 7311147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 370
Target Start/End: Complemental strand, 36469153 - 36469059
Alignment:
Q  278 actttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat--tacatttatctcattcatttatacatttttcttaata 370  Q
    ||||||||||||| ||| | | |||||||||||||| | |||||| |||||| |||  |   |||||||| ||||||||||||||||||||||||    
T  36469153 actttgcatttatgatagtggagaatgcaccaatacataacaaaaacacttataatcatttttttatctccttcatttatacatttttcttaata 36469059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 35988661 - 35988725
Alignment:
Q  256 cactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaa 320  Q
    ||||| ||||| | ||| ||| ||||||||||||| |||| | ||||||||||||||||||||||    
T  35988661 cactcccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaa 35988725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 370
Target Start/End: Complemental strand, 36446746 - 36446652
Alignment:
Q  278 actttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat--tacatttatctcattcatttatacatttttcttaata 370  Q
    ||||||||||||| ||| | | |||||||| ||||| | |||||| |||||| |||  |   |||||||| ||||||||||||||||||||||||    
T  36446746 actttgcatttatgatagtggagaatgcacaaatacataacaaaaacacttataatcatttttttatctccttcatttatacatttttcttaata 36446652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 9426618 - 9426572
Alignment:
Q  271 atcttccactttgcatttataataatagtgaatgcaccaatacttga 317  Q
    |||||||||||||||||||| ||||| ||||||| || |||||||||    
T  9426618 atcttccactttgcatttatgataatggtgaatgtactaatacttga 9426572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 370
Target Start/End: Complemental strand, 17243036 - 17242919
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||||||||| | ||| ||||||||||||||||| ||| ||| ||||  |||||||||| |||| |  ||| ||||  |  ||  | |||||||||||    
T  17243036 tcactctcaattcaatatattccactttgcatttatgatagtagagaatagaccaatacttaacaagagtactaaaaaccatttttctctctcattcatt 17242937  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||| ||||||||    
T  17242936 tatacatttgtcttaata 17242919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 370
Target Start/End: Complemental strand, 42870977 - 42870949
Alignment:
Q  342 tctcattcatttatacatttttcttaata 370  Q
    |||||||||||||||||||||||||||||    
T  42870977 tctcattcatttatacatttttcttaata 42870949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 10069666 - 10069550
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacattta--tctcattcatt 352  Q
    |||||||||||| | ||| ||| ||||||||||||| ||||| || ||||||| ||||||||||||||  ||||||||| |  ||||  |||| |||| |    
T  10069666 tcactctcaattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcatttttatctctctttcact 10069567  T
Q  353 tatacatttttcttaat 369  Q
    |||| ||||||||||||    
T  10069566 tatatatttttcttaat 10069550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 370
Target Start/End: Original strand, 41436109 - 41436221
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt-tatctcattcatttatac 357  Q
    |||||||| | ||| ||||||||||||||||| ||| |   |||| || |||||||| |||||| ||||||||||||  || | ||| ||||||||||||    
T  41436109 tctcaattcaatatattccactttgcatttatgatagtgaagaatacatcaatacttaacaaaaacacttaaaattattttctctctaattcatttatac 41436208  T
Q  358 atttttcttaata 370  Q
    |||||||||||||    
T  41436209 atttttcttaata 41436221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 20027216 - 20027154
Alignment:
Q  270 tatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    |||| ||||||||| |||||| ||||| ||||||||| ||||||||||||||| |||||||||    
T  20027216 tatcctccactttgtatttatgataatggtgaatgcagcaatacttgacaaaaacacttaaaa 20027154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 23684985 - 23685102
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||||||||| | ||| || |||||||||||||| ||| | | |||||||| ||||||| |||||| ||||||||| ||  ||  | |||| || |||    
T  23684985 tcactctcaattcaatatatttcactttgcatttatgatagtggagaatgcactaatacttaacaaaaacacttaaaactaattttctctctcctttatt 23685084  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  23685085 tatacatttttcttaata 23685102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 370
Target Start/End: Original strand, 2756707 - 2756817
Alignment:
Q  262 caatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctc--attcatttatacat 359  Q
    ||||||| ||| ||| ||||| ||||||| ||||| || ||||||| |||||||||||| | |||||||||| |  ||| ||||   |||||| ||||||    
T  2756707 caatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatttttctctcttcttcattaatacat 2756806  T
Q  360 ttttcttaata 370  Q
    |||||||||||    
T  2756807 ttttcttaata 2756817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 3100433 - 3100504
Alignment:
Q  262 caatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaat 333  Q
    ||||||| ||| ||||||||||||||||| ||| | | ||||||| |||||||| |||| ||||||||||||    
T  3100433 caatttaatatattccactttgcatttatgatagtggagaatgcagcaatacttaacaagatcacttaaaat 3100504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 363
Target Start/End: Original strand, 2882033 - 2882121
Alignment:
Q  277 cactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacattttt 363  Q
    |||||||||||||| ||| | | |||||||||||||||| |||| | |||||||||| |  ||  |||||| |||||||||||||||||    
T  2882033 cactttgcatttatgatagtggagaatgcaccaatacttaacaagagcacttaaaatcatttttctatctctttcatttatacattttt 2882121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 3487420 - 3487493
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcactt 328  Q
    |||||||||||| | ||| ||| ||||||||||| ||||||| || |||||| |||||||||| |||| |||||    
T  3487420 tcactctcaattcaatatattctactttgcatttgtaataatggtaaatgcatcaatacttgataaaaacactt 3487493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 368
Target Start/End: Original strand, 565135 - 565230
Alignment:
Q  275 tccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatttatacatttttcttaa 368  Q
    |||||||||||||||| ||| | | |||||||||||||||| |||| | |||||||||| |  ||  | |||| ||||| ||||||||||||||||    
T  565135 tccactttgcatttatgatagtggagaatgcaccaatacttaacaagaacacttaaaatcatttttctttctccttcatatatacatttttcttaa 565230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 883231 - 883172
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatact 314  Q
    ||||||| |||| | ||||||||||||  ||||||| ||||| |||||||||||||||||    
T  883231 tcactctgaattcaatatcttccacttcacatttatgataatggtgaatgcaccaatact 883172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 369
Target Start/End: Original strand, 7213503 - 7213617
Alignment:
Q  257 actctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatttatctc--attcattta 354  Q
    |||||||||| | ||| ||||||||| ||||||||||||    ||||||||||||| |||| |||  |||| ||||| |  ||| ||||   ||||||||    
T  7213503 actctcaattcaatatattccactttacatttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctctatttcattta 7213602  T
Q  355 tacatttttcttaat 369  Q
    |||||||||||||||    
T  7213603 tacatttttcttaat 7213617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 313
Target Start/End: Original strand, 12524334 - 12524377
Alignment:
Q  270 tatcttccactttgcatttataataatagtgaatgcaccaatac 313  Q
    ||||||||||||||||||||| || ||||| |||||||||||||    
T  12524334 tatcttccactttgcatttatgatcatagtaaatgcaccaatac 12524377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 734064 - 734026
Alignment:
Q  284 catttataataatagtgaatgcaccaatacttgacaaaa 322  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  734064 catttatgataatagtgaatgcaccaatatttgacaaaa 734026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 8550700 - 8550646
Alignment:
Q  278 actttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa 332  Q
    ||||||||||||| ||||| | |||||||| |||||||||||| | |||||||||    
T  8550700 actttgcatttatgataatggagaatgcacaaatacttgacaagaacacttaaaa 8550646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 44284342 - 44284292
Alignment:
Q  281 ttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaa 331  Q
    |||||||||| ||||| ||||||||||||||| ||||| ||| ||||||||    
T  44284342 ttgcatttatgataatggtgaatgcaccaatatttgacgaaaacacttaaa 44284292  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 4794599 - 4794679
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaatta 335  Q
    ||||| |||||| | ||| ||||||||||||||||| ||||||   |||||| ||||| ||||||| | |||| |||||||    
T  4794599 tcactttcaattcaatatattccactttgcatttatgataataaaaaatgcatcaatatttgacaagaacactcaaaatta 4794679  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 371
Target Start/End: Original strand, 229870 - 229966
Alignment:
Q  276 ccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaa-ttacatttatctcattcatttatacatttttcttaatac 371  Q
    ||||||||||||||| ||||| | |||||||||||||||| |||| | |||||||||  |   | |||||| ||||||||||||||| |||||||||    
T  229870 ccactttgcatttatgataatggagaatgcaccaatacttaacaagagcacttaaaacatttttctatctccttcatttatacatttgtcttaatac 229966  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 313
Target Start/End: Original strand, 8917 - 8971
Alignment:
Q  259 tctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatac 313  Q
    |||||||| | ||| ||||||||||||||||||||| | | ||||||||||||||    
T  8917 tctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatac 8971  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 370
Target Start/End: Original strand, 98851 - 98968
Alignment:
Q  255 tcactctcaatttattatcttccactttgcatttataataatagtgaatgcaccaatacttgacaaaatcacttaaaattacatt--tatctcattcatt 352  Q
    |||||||||||| | ||| |||||||||  |||||| ||  | |  |||||||||||||||  ||| | |||||||||| |  ||  | |||||||||||    
T  98851 tcactctcaattcaatatattccactttatatttattatggtggataatgcaccaatacttatcaagagcacttaaaatcatttttctctctcattcatt 98950  T
Q  353 tatacatttttcttaata 370  Q
    ||||||||||||||||||    
T  98951 tatacatttttcttaata 98968  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 352497 - 352428
Alignment:
Q  300 gaatgcaccaatacttgacaaaatcacttaaaattacatttatctcattcatttatacatttttcttaat 369  Q
    |||||||||||||||| |||||  |||| |||||||  ||| |||| || ||||||||| ||||||||||    
T  352497 gaatgcaccaatacttaacaaagacactcaaaattatttttctctcttttatttatacacttttcttaat 352428  T

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