View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4662-Insertion-6 (Length: 229)

Name: NF4662-Insertion-6
Description: NF4662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4662-Insertion-6
NF4662-Insertion-6
[»] chr7 (68 HSPs)
chr7 (7-229)||(14593687-14593909)
chr7 (7-229)||(16013210-16013432)
chr7 (9-229)||(36514343-36514561)
chr7 (7-229)||(5335848-5336069)
chr7 (7-229)||(48736033-48736255)
chr7 (81-229)||(39906582-39906726)
chr7 (7-229)||(47848600-47848823)
chr7 (81-229)||(34869346-34869490)
chr7 (81-229)||(35906413-35906557)
chr7 (15-229)||(39811883-39812098)
chr7 (68-229)||(43282331-43282491)
chr7 (81-229)||(13859220-13859364)
chr7 (81-229)||(31005149-31005293)
chr7 (81-229)||(49029202-49029346)
chr7 (10-229)||(1740723-1740948)
chr7 (81-229)||(37617870-37618015)
chr7 (83-228)||(40139133-40139271)
chr7 (81-225)||(33072884-33073022)
chr7 (92-229)||(30200186-30200315)
chr7 (80-229)||(36136690-36136835)
chr7 (81-229)||(11593886-11594030)
chr7 (71-185)||(28858016-28858124)
chr7 (81-229)||(33350018-33350162)
chr7 (81-229)||(45836692-45836836)
chr7 (7-144)||(18605279-18605421)
chr7 (7-224)||(28628066-28628284)
chr7 (68-161)||(45558352-45558445)
chr7 (9-144)||(18637569-18637709)
chr7 (9-144)||(18651003-18651143)
chr7 (68-229)||(42187397-42187553)
chr7 (81-229)||(12841487-12841631)
chr7 (82-226)||(46356069-46356209)
chr7 (29-229)||(19262589-19262787)
chr7 (68-173)||(12966000-12966105)
chr7 (83-229)||(27021906-27022062)
chr7 (160-225)||(40008704-40008769)
chr7 (81-229)||(43281602-43281744)
chr7 (81-227)||(44855384-44855526)
chr7 (69-229)||(25579277-25579427)
chr7 (163-223)||(29653844-29653904)
chr7 (81-185)||(6374838-6374938)
chr7 (73-185)||(41948486-41948594)
chr7 (85-167)||(7189442-7189524)
chr7 (81-224)||(38606936-38607074)
chr7 (81-151)||(43491308-43491378)
chr7 (81-229)||(35559205-35559350)
chr7 (81-144)||(29650391-29650454)
chr7 (162-229)||(36651920-36651987)
chr7 (81-185)||(46014393-46014492)
chr7 (82-144)||(7220751-7220813)
chr7 (78-144)||(7273046-7273112)
chr7 (82-140)||(35713706-35713764)
chr7 (86-144)||(38920801-38920859)
chr7 (83-144)||(2885936-2885997)
chr7 (10-59)||(19119559-19119608)
chr7 (7-64)||(26742029-26742086)
chr7 (83-181)||(28020938-28021032)
chr7 (82-143)||(30914681-30914742)
chr7 (79-144)||(40830230-40830295)
chr7 (92-211)||(47796359-47796476)
chr7 (81-144)||(22349627-22349690)
chr7 (162-229)||(28542173-28542239)
chr7 (68-126)||(6420689-6420747)
chr7 (94-177)||(23720813-23720898)
chr7 (75-121)||(24549899-24549945)
chr7 (159-229)||(24549973-24550043)
chr7 (82-140)||(40169660-40169718)
chr7 (157-187)||(48202974-48203004)
[»] chr8 (55 HSPs)
chr8 (7-223)||(32043522-32043739)
chr8 (7-214)||(25985462-25985667)
chr8 (78-229)||(36395158-36395306)
chr8 (81-229)||(36545073-36545219)
chr8 (85-229)||(36565457-36565597)
chr8 (7-225)||(10080040-10080257)
chr8 (7-225)||(45419169-45419384)
chr8 (159-225)||(16351320-16351386)
chr8 (98-229)||(30456441-30456567)
chr8 (95-229)||(13171875-13172005)
chr8 (70-187)||(9695599-9695712)
chr8 (118-229)||(29520586-29520694)
chr8 (25-144)||(34196166-34196287)
chr8 (9-182)||(25985735-25985912)
chr8 (7-229)||(39953397-39953620)
chr8 (78-227)||(40813250-40813397)
chr8 (68-144)||(34196079-34196153)
chr8 (81-225)||(42854216-42854356)
chr8 (78-229)||(39946783-39946930)
chr8 (160-228)||(36069570-36069638)
chr8 (81-144)||(8879652-8879715)
chr8 (71-229)||(30748385-30748537)
chr8 (7-144)||(29700283-29700425)
chr8 (71-167)||(2776431-2776528)
chr8 (86-229)||(2796481-2796622)
chr8 (7-64)||(7531777-7531834)
chr8 (160-217)||(16705700-16705757)
chr8 (68-145)||(43732562-43732639)
chr8 (68-207)||(78988-79126)
chr8 (81-144)||(12491350-12491413)
chr8 (73-163)||(12611523-12611613)
chr8 (7-64)||(16351470-16351527)
chr8 (7-64)||(38178393-38178450)
chr8 (7-64)||(38409155-38409212)
chr8 (91-229)||(39051068-39051202)
chr8 (68-144)||(18474159-18474235)
chr8 (68-144)||(36143372-36143448)
chr8 (105-144)||(7103277-7103316)
chr8 (194-229)||(12492163-12492198)
chr8 (158-229)||(15215556-15215627)
chr8 (99-229)||(42493536-42493660)
chr8 (190-229)||(44681393-44681432)
chr8 (118-185)||(5908612-5908675)
chr8 (82-140)||(35643814-35643872)
chr8 (195-229)||(43732493-43732527)
chr8 (7-45)||(45512628-45512666)
chr8 (81-185)||(18125145-18125243)
chr8 (164-229)||(30783331-30783396)
chr8 (7-64)||(37826383-37826440)
chr8 (91-144)||(41444548-41444601)
chr8 (9-45)||(2216399-2216435)
chr8 (161-229)||(2518680-2518747)
chr8 (81-185)||(11523935-11524036)
chr8 (156-208)||(21121105-21121157)
chr8 (68-152)||(33511355-33511439)
[»] chr4 (72 HSPs)
chr4 (23-229)||(17900406-17900613)
chr4 (7-187)||(46371992-46372173)
chr4 (68-226)||(41192763-41192919)
chr4 (7-167)||(35555780-35555945)
chr4 (26-229)||(2588907-2589120)
chr4 (82-229)||(54470133-54470276)
chr4 (75-224)||(44360014-44360162)
chr4 (10-223)||(25257717-25257929)
chr4 (7-145)||(26356625-26356768)
chr4 (81-229)||(31960026-31960170)
chr4 (81-229)||(48174305-48174449)
chr4 (10-141)||(42285837-42285972)
chr4 (7-187)||(31897561-31897740)
chr4 (68-225)||(33709849-33710007)
chr4 (78-229)||(436155-436302)
chr4 (7-118)||(31961399-31961515)
chr4 (71-228)||(44047550-44047703)
chr4 (77-216)||(10208977-10209108)
chr4 (81-227)||(52569727-52569869)
chr4 (105-225)||(10775658-10775774)
chr4 (81-229)||(33191060-33191204)
chr4 (81-229)||(43433844-43433994)
chr4 (79-225)||(31403228-31403372)
chr4 (71-228)||(51252663-51252814)
chr4 (81-229)||(33227135-33227279)
chr4 (7-229)||(29398745-29398967)
chr4 (108-229)||(12494676-12494793)
chr4 (68-184)||(46715571-46715678)
chr4 (82-229)||(21106910-21107057)
chr4 (83-229)||(31458954-31459098)
chr4 (6-144)||(42639152-42639295)
chr4 (162-229)||(45423545-45423612)
chr4 (92-229)||(49987354-49987487)
chr4 (81-229)||(53707720-53707864)
chr4 (81-229)||(56375216-56375360)
chr4 (7-140)||(1427417-1427555)
chr4 (82-229)||(23906508-23906657)
chr4 (82-229)||(47265415-47265558)
chr4 (11-229)||(50471454-50471671)
chr4 (72-226)||(38570950-38571099)
chr4 (81-229)||(48622755-48622897)
chr4 (7-156)||(49738741-49738891)
chr4 (83-224)||(37797783-37797920)
chr4 (78-229)||(45205054-45205204)
chr4 (8-123)||(51550382-51550502)
chr4 (68-187)||(1380335-1380450)
chr4 (68-185)||(28497458-28497572)
chr4 (100-221)||(38266076-38266197)
chr4 (29-186)||(40018344-40018503)
chr4 (111-187)||(6478910-6478982)
chr4 (158-225)||(20105756-20105823)
chr4 (158-229)||(25967552-25967623)
chr4 (71-145)||(50662393-50662468)
chr4 (5-108)||(42618922-42619027)
chr4 (162-224)||(43070053-43070115)
chr4 (81-143)||(50286970-50287032)
chr4 (160-229)||(1777302-1777371)
chr4 (7-64)||(11389816-11389873)
chr4 (83-140)||(30807601-30807658)
chr4 (85-187)||(36557246-36557343)
chr4 (164-229)||(44860780-44860845)
chr4 (160-217)||(45185304-45185361)
chr4 (83-163)||(30621418-30621498)
chr4 (7-112)||(53518456-53518563)
chr4 (81-144)||(4440860-4440923)
chr4 (129-229)||(35690230-35690326)
chr4 (167-225)||(18966483-18966541)
chr4 (82-144)||(28236190-28236252)
chr4 (128-225)||(34233290-34233385)
chr4 (7-64)||(47147465-47147522)
chr4 (80-137)||(47611741-47611798)
chr4 (194-226)||(49739115-49739147)
[»] chr5 (54 HSPs)
chr5 (7-229)||(21952277-21952506)
chr5 (7-229)||(10082878-10083094)
chr5 (7-229)||(11002554-11002777)
chr5 (7-206)||(2712897-2713093)
chr5 (7-185)||(14749277-14749456)
chr5 (7-216)||(31636053-31636261)
chr5 (7-229)||(1525566-1525793)
chr5 (73-212)||(33667161-33667294)
chr5 (7-138)||(42199299-42199435)
chr5 (81-229)||(2075686-2075830)
chr5 (68-144)||(37065536-37065612)
chr5 (83-229)||(1275191-1275332)
chr5 (81-229)||(4496308-4496454)
chr5 (98-229)||(14667683-14667816)
chr5 (78-229)||(10639223-10639377)
chr5 (81-229)||(24178436-24178580)
chr5 (82-229)||(1287792-1287945)
chr5 (68-145)||(36123391-36123467)
chr5 (158-226)||(5305545-5305613)
chr5 (81-229)||(12492596-12492743)
chr5 (73-144)||(18351111-18351183)
chr5 (81-229)||(16347590-16347734)
chr5 (7-132)||(38578654-38578784)
chr5 (160-225)||(32516488-32516553)
chr5 (81-185)||(14665680-14665784)
chr5 (7-150)||(18698801-18698943)
chr5 (81-185)||(38684937-38685037)
chr5 (162-224)||(9235000-9235062)
chr5 (163-229)||(21093702-21093768)
chr5 (168-229)||(6368220-6368281)
chr5 (79-229)||(34272948-34273099)
chr5 (81-226)||(3301773-3301914)
chr5 (68-229)||(7678406-7678566)
chr5 (193-229)||(43558134-43558170)
chr5 (8-187)||(7359394-7359573)
chr5 (194-229)||(27998349-27998384)
chr5 (78-144)||(43475247-43475313)
chr5 (91-136)||(21193862-21193907)
chr5 (80-141)||(28676605-28676666)
chr5 (7-44)||(33667547-33667584)
chr5 (158-214)||(683977-684033)
chr5 (68-227)||(34194697-34194850)
chr5 (160-224)||(41110028-41110092)
chr5 (82-177)||(43558040-43558133)
chr5 (68-143)||(79521-79596)
chr5 (81-144)||(28977071-28977134)
chr5 (106-152)||(3097172-3097218)
chr5 (154-224)||(26884970-26885040)
chr5 (7-64)||(12576993-12577050)
chr5 (83-152)||(15370006-15370074)
chr5 (98-143)||(15588769-15588814)
chr5 (7-64)||(42199485-42199542)
chr5 (68-185)||(6859351-6859464)
chr5 (158-186)||(27998402-27998430)
[»] chr1 (70 HSPs)
chr1 (9-227)||(43423645-43423866)
chr1 (7-229)||(26016363-26016586)
chr1 (81-229)||(1210671-1210815)
chr1 (10-229)||(40419565-40419785)
chr1 (10-144)||(10272266-10272404)
chr1 (7-229)||(9509244-9509467)
chr1 (81-229)||(38807883-38808030)
chr1 (81-229)||(51440977-51441121)
chr1 (7-167)||(2544583-2544747)
chr1 (95-229)||(9599620-9599750)
chr1 (7-144)||(27637764-27637908)
chr1 (81-229)||(696195-696339)
chr1 (81-229)||(9592660-9592804)
chr1 (81-229)||(30202342-30202486)
chr1 (81-229)||(34792561-34792705)
chr1 (82-229)||(32231167-32231310)
chr1 (81-229)||(22090020-22090166)
chr1 (11-144)||(37263338-37263476)
chr1 (81-229)||(4001667-4001811)
chr1 (81-229)||(15085860-15086004)
chr1 (7-121)||(28528385-28528504)
chr1 (85-185)||(51812495-51812591)
chr1 (82-225)||(18793201-18793340)
chr1 (83-227)||(8671848-8671986)
chr1 (10-187)||(39422179-39422355)
chr1 (7-64)||(50771689-50771746)
chr1 (73-152)||(8343062-8343141)
chr1 (81-229)||(32082957-32083101)
chr1 (81-229)||(49347605-49347749)
chr1 (68-126)||(29807891-29807949)
chr1 (68-177)||(48431605-48431712)
chr1 (12-125)||(52442666-52442784)
chr1 (81-229)||(43240591-43240737)
chr1 (7-63)||(49377417-49377473)
chr1 (81-229)||(51601984-51602126)
chr1 (68-224)||(27848004-27848155)
chr1 (68-167)||(40416355-40416454)
chr1 (7-144)||(3818989-3819131)
chr1 (86-228)||(17815402-17815537)
chr1 (7-45)||(51584855-51584893)
chr1 (7-127)||(12261846-12261971)
chr1 (115-229)||(4379931-4380049)
chr1 (71-150)||(32404728-32404807)
chr1 (78-144)||(5338731-5338797)
chr1 (7-144)||(6025612-6025754)
chr1 (78-144)||(13827926-13827992)
chr1 (7-64)||(43898321-43898378)
chr1 (7-64)||(52073185-52073241)
chr1 (68-112)||(10569266-10569310)
chr1 (157-229)||(52442788-52442860)
chr1 (71-162)||(1661419-1661510)
chr1 (68-184)||(19908238-19908350)
chr1 (81-144)||(39140527-39140590)
chr1 (158-225)||(40920822-40920889)
chr1 (8-63)||(50806762-50806817)
chr1 (175-225)||(6641062-6641112)
chr1 (78-136)||(16822231-16822289)
chr1 (82-217)||(16943113-16943243)
chr1 (7-64)||(9599527-9599584)
chr1 (195-224)||(16273142-16273171)
chr1 (7-64)||(42501200-42501257)
chr1 (200-229)||(52073800-52073829)
chr1 (80-152)||(7921834-7921906)
chr1 (157-205)||(19969645-19969693)
chr1 (7-39)||(29577275-29577307)
chr1 (5-45)||(33560989-33561029)
chr1 (159-226)||(33561075-33561140)
chr1 (193-229)||(34827422-34827458)
chr1 (7-39)||(36339936-36339968)
chr1 (9-45)||(44008690-44008726)
[»] chr6 (31 HSPs)
chr6 (76-229)||(33083984-33084133)
chr6 (9-229)||(9593843-9594068)
chr6 (7-221)||(10617367-10617574)
chr6 (81-229)||(5631744-5631892)
chr6 (81-229)||(28085302-28085446)
chr6 (81-229)||(30031182-30031326)
chr6 (95-228)||(6641635-6641764)
chr6 (72-229)||(5258351-5258506)
chr6 (78-144)||(21352046-21352112)
chr6 (73-143)||(24665818-24665888)
chr6 (81-229)||(32755845-32755991)
chr6 (157-225)||(33998288-33998356)
chr6 (78-229)||(608085-608230)
chr6 (164-227)||(9568588-9568651)
chr6 (108-229)||(20427875-20427992)
chr6 (159-229)||(5129123-5129193)
chr6 (94-144)||(7513616-7513666)
chr6 (7-144)||(31818539-31818680)
chr6 (7-60)||(3963895-3963948)
chr6 (68-157)||(6293585-6293674)
chr6 (80-229)||(14389379-14389517)
chr6 (82-146)||(26291786-26291848)
chr6 (83-143)||(43266-43326)
chr6 (82-229)||(14030732-14030876)
chr6 (9-144)||(21870200-21870348)
chr6 (81-140)||(30679417-30679476)
chr6 (138-185)||(32400113-32400160)
chr6 (195-225)||(7513305-7513335)
chr6 (159-229)||(12134187-12134257)
chr6 (194-227)||(4948628-4948661)
chr6 (194-227)||(4955599-4955632)
[»] chr2 (44 HSPs)
chr2 (7-225)||(4598695-4598916)
chr2 (7-151)||(44437854-44438003)
chr2 (68-229)||(9556568-9556724)
chr2 (81-229)||(38452897-38453045)
chr2 (74-229)||(8180706-8180857)
chr2 (7-123)||(42543263-42543384)
chr2 (15-182)||(43832068-43832239)
chr2 (78-229)||(41763251-41763397)
chr2 (7-181)||(11412695-11412869)
chr2 (82-229)||(38434877-38435021)
chr2 (81-229)||(12734627-12734769)
chr2 (82-185)||(40759069-40759169)
chr2 (7-224)||(23714394-23714609)
chr2 (7-224)||(24102066-24102281)
chr2 (78-229)||(16097195-16097346)
chr2 (81-229)||(38429810-38429954)
chr2 (7-185)||(37481750-37481929)
chr2 (80-185)||(43752158-43752259)
chr2 (81-225)||(3866002-3866142)
chr2 (74-184)||(25834650-25834758)
chr2 (81-229)||(36183377-36183521)
chr2 (68-229)||(45077674-45077838)
chr2 (71-227)||(7825286-7825440)
chr2 (7-64)||(19235117-19235174)
chr2 (78-225)||(9578912-9579053)
chr2 (10-157)||(12141538-12141690)
chr2 (158-229)||(2610454-2610525)
chr2 (84-225)||(42092449-42092584)
chr2 (7-64)||(5759128-5759185)
chr2 (71-185)||(13240947-13241057)
chr2 (118-229)||(4807518-4807629)
chr2 (195-229)||(9647927-9647961)
chr2 (81-147)||(24583844-24583910)
chr2 (82-167)||(2610572-2610657)
chr2 (71-143)||(14197364-14197437)
chr2 (80-136)||(41779519-41779575)
chr2 (9-64)||(7293694-7293749)
chr2 (81-144)||(43238305-43238368)
chr2 (82-167)||(13149315-13149400)
chr2 (156-225)||(23997547-23997616)
chr2 (108-144)||(786837-786873)
chr2 (71-143)||(9647811-9647883)
chr2 (193-229)||(19527858-19527894)
chr2 (7-63)||(26784473-26784529)
[»] chr3 (62 HSPs)
chr3 (78-229)||(52138726-52138873)
chr3 (85-229)||(28245363-28245503)
chr3 (7-138)||(21200561-21200697)
chr3 (78-229)||(54128304-54128451)
chr3 (82-187)||(3987015-3987116)
chr3 (7-186)||(31454358-31454538)
chr3 (7-145)||(37351413-37351556)
chr3 (83-229)||(51447924-51448065)
chr3 (7-135)||(11581460-11581593)
chr3 (7-212)||(39600814-39601020)
chr3 (81-229)||(54278946-54279090)
chr3 (81-216)||(49503766-49503897)
chr3 (80-144)||(50960844-50960908)
chr3 (81-229)||(21999-22142)
chr3 (78-225)||(19736926-19737070)
chr3 (81-223)||(36820173-36820309)
chr3 (158-229)||(46568042-46568113)
chr3 (81-229)||(47233808-47233952)
chr3 (71-225)||(50249311-50249467)
chr3 (7-144)||(38430855-38430997)
chr3 (78-227)||(344920-345065)
chr3 (83-228)||(3365008-3365149)
chr3 (81-229)||(5168754-5168902)
chr3 (68-144)||(29374941-29375017)
chr3 (162-229)||(2341003-2341070)
chr3 (82-229)||(49841537-49841688)
chr3 (161-227)||(45236784-45236850)
chr3 (160-229)||(38054624-38054693)
chr3 (78-183)||(38060399-38060504)
chr3 (78-135)||(39235154-39235211)
chr3 (68-145)||(39535639-39535716)
chr3 (68-213)||(45289290-45289434)
chr3 (5-229)||(19676212-19676446)
chr3 (78-225)||(19757829-19757973)
chr3 (7-47)||(26990322-26990362)
chr3 (69-144)||(31453138-31453214)
chr3 (68-144)||(41842710-41842786)
chr3 (81-144)||(25191384-25191447)
chr3 (91-229)||(26490243-26490375)
chr3 (82-229)||(33272235-33272384)
chr3 (118-229)||(45728072-45728180)
chr3 (92-147)||(48953645-48953700)
chr3 (68-138)||(46140445-46140515)
chr3 (78-140)||(48734344-48734406)
chr3 (7-64)||(31261075-31261131)
chr3 (83-140)||(38850131-38850188)
chr3 (7-64)||(43254983-43255040)
chr3 (8-64)||(22902890-22902946)
chr3 (92-144)||(26388488-26388540)
chr3 (74-125)||(26990234-26990285)
chr3 (194-229)||(47542033-47542068)
chr3 (91-145)||(37487164-37487218)
chr3 (195-229)||(42510333-42510367)
chr3 (78-144)||(43694974-43695040)
chr3 (91-125)||(46568132-46568166)
chr3 (82-143)||(4472553-4472614)
chr3 (81-171)||(35033130-35033216)
chr3 (13-46)||(40743287-40743320)
chr3 (7-64)||(40981988-40982045)
chr3 (156-229)||(53519512-53519585)
chr3 (157-185)||(29600869-29600897)
chr3 (194-226)||(46431992-46432024)
[»] scaffold0018 (2 HSPs)
scaffold0018 (81-227)||(31396-31538)
scaffold0018 (80-229)||(44079-44227)
[»] scaffold0036 (1 HSPs)
scaffold0036 (82-229)||(4484-4628)
[»] scaffold0113 (1 HSPs)
scaffold0113 (91-229)||(11818-11954)
[»] scaffold0157 (1 HSPs)
scaffold0157 (108-227)||(25684-25799)
[»] scaffold0021 (1 HSPs)
scaffold0021 (95-145)||(101001-101051)
[»] scaffold0325 (1 HSPs)
scaffold0325 (78-144)||(11805-11871)
[»] scaffold0024 (1 HSPs)
scaffold0024 (83-229)||(82647-82789)
[»] scaffold0570 (1 HSPs)
scaffold0570 (81-144)||(1160-1223)


Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 14593909 - 14593687
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatatacagaatccacaggtcttctcactacatgcccaaatca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14593909 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatatacagaatccacaggtcttctcactacatgcccaaatca 14593810  T
Q  107 cctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttacc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14593809 cctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttacc 14593710  T
Q  207 acacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||||||    
T  14593709 acacatccaacgcaacatcctca 14593687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 16013432 - 16013210
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatatacagaatccacaggtcttctcactacatgcccaaatca 106  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16013432 agtttttctaggtcttcccctacctctggtgatttgactcctctctatctgatctactatatacataatccacaggtcttctcactacatgcccaaatca 16013333  T
Q  107 cctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttacc 206  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16013332 cctaagtctagtttctaccattttttgtactataggtgtcaccccagctcactctctctctaatgttgtcatttctaatttggttccgtctagtcttacc 16013233  T
Q  207 acacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||||||    
T  16013232 acacatccaacgcaacatcctca 16013210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 229
Target Start/End: Original strand, 36514343 - 36514561
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact----ata-tacagaatccacaggtcttctcactacatgcccaaa 103  Q
    |||||||| |||| |||||||||||||||| |||||||| ||||||||||||||||    ||| ||||||||||||| ||| |||| |||||||||||||    
T  36514343 tttttctatgtct-cccctacctctagtgacttgactcccctctatctgatctactctccatactacagaatccacaagtcgtctctctacatgcccaaa 36514441  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtctt 203  Q
     ||||||||||||||||||||||| ||||||||||||||||  ||||||       ||||||||||||||||| ||||||||||  | |||| |||||||    
T  36514442 ccacctaagtctagtttctaccatcttttctactataggtgctacccca------actctctctaatgttgtcctttctaattctatcccgtttagtctt 36514535  T
Q  204 accacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||||||||||    
T  36514536 accacacatccaacgcaacatcctca 36514561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 5336069 - 5335848
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||| |||| |||||||||||| |||||||||||||| ||| |||| ||||||| |      |||||||||||||| ||||||| ||| |||||||    
T  5336069 agtttttcaaggttttcccctacctcgagtgatttgactcccctccatctaatctactctcctaactacagaatccacagttcttctctctatatgccca 5335970  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || ||||||||||||||||| ||||| ||| ||||||||| ||  ||||||       |||||||||||||| ||||||||||||   ||| ||||||||    
T  5335969 aaccacctaagtctagtttcgaccatctttcctactatagatgctacccca------actctctctaatgttatcatttctaattgcattctgtctagtc 5335876  T
Q  202 ttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||| ||||||||||||||||    
T  5335875 ttaccacacattcaacgcaacatcctca 5335848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 48736033 - 48736255
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||| ||||||  |||||||||||||||| ||||||| ||| || ||||||||| |      |||| ||||||||||||||| | |||||||  ||    
T  48736033 agtttttcaaggtctagccctacctctagtgatctgactcc-ctccatttgatctactctcctaactacataatccacaggtcttcgctctacatgagca 48736131  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || |||||||||||||||||| |||| ||||||||| ||||||  ||||||    ||||||||| |||||| |||||||||||||   |  | |||||||    
T  48736132 aaccacctaagtctagtttctcccatcttttctactgtaggtgctacccca----actctctctataatgtcgtcatttctaattttatctcatctagtc 48736227  T
Q  202 ttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||| ||||||||||||||||    
T  48736228 ttaccacacattcaacgcaacatcctca 48736255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 39906582 - 39906726
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||  |||    |||||||||||||||||| |||||||     
T  39906582 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacc----ctcactctctctctaatggtgtcattc 39906677  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | | ||||||||||||||| ||||||||||| ||||||||    
T  39906678 ctaatcctatcctgtctagtcttaccactcatccaacgcagcatcctca 39906726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 47848823 - 47848600
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||| |||||| || |||||||||||  ||||   ||| |||||||||||| |      ||||||||  ||| |||||||| | |||||||||    
T  47848823 agtttttctagttcttcctctgcctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtcttctctcgacatgccca 47848724  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || |||||||| ||| |||| ||||| |||||||||||||| |  ||||||    ||||||||||||||||| ||| |||| || |  | ||||||||||    
T  47848723 aaccacctaagcctattttccaccatcttttctactataggcgctacccca----actctctctctaatgttatcacttctgatcctatcccgtctagtc 47848628  T
Q  202 ttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||| |||||||||||    
T  47848627 ttaccacacatccaacacaacatcctca 47848600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 34869490 - 34869346
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  34869490 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 34869395  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  34869394 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 34869346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 35906413 - 35906557
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  ||| |    |||||||||||||||| |||||||     
T  35906413 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacctc----cactctctctctaatggtgtcattc 35906508  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | | ||||||||||||||| ||||||||||||||||||||    
T  35906509 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 35906557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 229
Target Start/End: Complemental strand, 39812098 - 39811883
Alignment:
Q  15 taggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaatcacct 109  Q
    |||||||||| || |||||||||||||| ||   ||| |||||||||||| |      || |||||| |||  ||||||| |||||||||||||  ||||    
T  39812098 taggtcttccacttcctctagtgatttggctttcctccatctgatctactctccttactatagaatctacatctcttctctctacatgcccaaactacct 39811999  T
Q  110 aagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccaca 209  Q
    ||| | |||||  |||||||||||||  |||||||   |||||    ||||||||||||||||||||||||||||| |  |  |||||||||||||||||    
T  39811998 aagccgagttttcaccattttttctatgataggtgctgcccca----actctctctctaatgttgtcatttctaatcctatcacgtctagtcttaccaca 39811903  T
Q  210 catccaacgcaacatcctca 229  Q
    ||||||| ||||||||||||    
T  39811902 catccaaagcaacatcctca 39811883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 43282491 - 43282331
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||||||||  || |||||||| |||||||||||| ||||||||| |||||||| |||   ||||||||||||||||  |||||| ||| ||||||||      
T  43282491 tacagaatctgcaagtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctaccccaactctctctctct-a 43282393  T
Q  168 aatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||    |   |||||| ||||||||||||| |||||||||||||||    
T  43282392 aatgttgtcatttctaatcatatcatgtctagacttaccacacatctaacgcaacatcctca 43282331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 13859220 - 13859364
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  13859220 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 13859315  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| | ||||||||||||||||||    
T  13859316 ctaatcctatcatgtctagtcttaccactcgtccaacgcaacatcctca 13859364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 31005293 - 31005149
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||  ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| ||| |||     
T  31005293 ggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgttattc 31005198  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | | ||||||||||||||| ||||||||||||||||||||    
T  31005197 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 31005149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 49029346 - 49029202
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  49029346 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 49029251  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| ||||||||| ||||||||||    
T  49029250 ctaatcctatcatgtctagtcttaccactcatccaacgtaacatcctca 49029202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 229
Target Start/End: Complemental strand, 1740948 - 1740723
Alignment:
Q  10 ttttctagg-tcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaa 103  Q
    ||||||||| |||||| ||  |||||||||||||||| | ||| |||||||||||| |      |||| ||||||||  ||| ||  |||||| ||||||    
T  1740948 ttttctaggatcttcctctggctctagtgatttgactaccctccatctgatctactctccttactacaaaatccacaattctcctatctacatacccaaa 1740849  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtctt 203  Q
     |||||||| |||||||| ||||| ||||||||| ||| ||  |||| | ||| |||||||||||||||| |||||||||||      ||  ||||||||    
T  1740848 ccacctaagcctagtttccaccatattttctactgtagatgctacccaaactctctctctctctaatgttctcatttctaatcttaccccacctagtctt 1740749  T
Q  204 accacacatccaacgcaacatcctca 229  Q
    || |||||||||||||||||||||||    
T  1740748 actacacatccaacgcaacatcctca 1740723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 37618015 - 37617870
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagttt-ctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatt 179  Q
    ||||||||| ||||||||||||| || ||||| ||| ||| ||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||    
T  37618015 ggtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcatt 37617920  T
Q  180 tctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  37617919 cctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctca 37617870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 40139133 - 40139271
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    ||||||| ||||||||||| |||||||||| | |||||| ||||| ||||||||||||||||  |||| |       ||||||||||||||||| |||||    
T  40139133 tcttctccctacatgcccagatcacctaagcccagtttccaccatattttctactataggtgaaacccga-------ctctctctaatgttgtcttttct 40139225  T
Q  183 aattcggttccgtctagtcttaccacacatccaacgcaacatcctc 228  Q
    |||    | ||||||||||||||||||||||| || ||||||||||    
T  40139226 aatcttatcccgtctagtcttaccacacatcccacacaacatcctc 40139271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 33073022 - 33072884
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||  |||||      | |||||||||||| |||||||     
T  33073022 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccc------cactctctctaatggtgtcattc 33072929  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||||| |  |   ||||||||||||||| ||||||||||||||||    
T  33072928 ctaatcctatcttgtctagtcttaccactcatccaacgcaacatc 33072884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 229
Target Start/End: Original strand, 30200186 - 30200315
Alignment:
Q  92 tacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggtt 191  Q
    |||||||| |||||||||||| |||||||| ||||| ||||||||||||||||| |||        ||  ||||||||||||||||||||||||    |     
T  30200186 tacatgccaaaatcacctaagcctagtttccaccatcttttctactataggtgttacc--------ctaactctctaatgttgtcatttctaatcatatc 30200277  T
Q  192 ccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    || |||| |||||||||||||||||| |||||||||||    
T  30200278 ccatctaatcttaccacacatccaacacaacatcctca 30200315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 229
Target Start/End: Complemental strand, 36136835 - 36136690
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatt 179  Q
    |||| ||||| ||| |||||||||  ||||||| ||| |||||||||| ||||||||||||||||  ||||||    ||||||||||||||| |||||||    
T  36136835 aggtattctctctatatgcccaaacaacctaagactattttctaccatcttttctactataggtgctacccca----actctctctctaatggtgtcatt 36136740  T
Q  180 tctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     ||||  |  | || |||||||||||||| |||||||| |||||| ||||    
T  36136739 cctaaacctatcccttctagtcttaccacccatccaacacaacattctca 36136690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 11594030 - 11593886
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||   || |||||||||  ||||||||||||||||  |||||    ||||||||||| |||| |||||||     
T  11594030 ggtcttctctctacatgcccaaaccatctaaccgtattttctaccaacttttctactataggtgctacccc----cactctctctcaaatggtgtcattc 11593935  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||    | | ||||||||||||||| ||||||||||||||||||||    
T  11593934 ctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctca 11593886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 28858124 - 28858016
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaat 170  Q
    |||||||||||||| |||  ||||||||||||| ||||||| |  |||||||||||| |||||||| ||||||| |||||||      |||||| |||||    
T  28858124 agaatccacaggtcatctttctacatgcccaaaccacctaacttgagtttctaccatgttttctacaataggtgccacccca------tctctcactaat 28858031  T
Q  171 gttgtcatttctaat 185  Q
    |||||||||||||||    
T  28858030 gttgtcatttctaat 28858016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 33350018 - 33350162
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||| ||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  33350018 ggtcttctctctacatgcccaaaccatctaagcctattttctagcaacttttctactataggtgcaacccc----cactctctctctaatggtgtcattc 33350113  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||| |  |   ||||||||||||||| ||||||| ||||||||||||    
T  33350114 ttaatcctatcatgtctagtcttaccactcatccaaggcaacatcctca 33350162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 45836692 - 45836836
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  45836692 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 45836787  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||| ||||||||| |||||| |||||||||||||    
T  45836788 ctaatcctatcttgtctactcttaccactcatccagcgcaacatcctca 45836836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 18605279 - 18605421
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatcta-----ctatatacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||| ||| ||||||||||||||||  ||| ||||||||||     |||  || | |||| ||| |||||||| |||||||| ||    
T  18605279 agtttttctaggtctacccatacatctagtgatttgactctcctcgatctgatctaatctcctaactatataatctacatgtcttctctctacatgctca 18605378  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    || ||||||||| ||||||||||||| |||| || ||||||||    
T  18605379 aaccacctaagtttagtttctaccatcttttataatataggtg 18605421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 224
Target Start/End: Original strand, 28628066 - 28628284
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| |||||||| |||||||||||   ||| ||| |||||||| |      |||| |||| |||||| |||||  ||||||||||    
T  28628066 agtttttctaggtcttcctctacctcttgtgatttgactatcctccatcggatctactctccttactacataatctacaggttttctctttacatgccca 28628165  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || |||||||| | | |||| |||||  |||||||| ||||||  || |||    |||| |||||||||||||| ||||||||| |  | |||| | |||    
T  28628166 aaccacctaagccaattttccaccatcatttctactctaggtgctactcca----actccctctctaatgttgtaatttctaatcccatcccgtatggtc 28628261  T
Q  202 ttaccacacatccaacgcaacat 224  Q
    |||||| |||||||| |||||||    
T  28628262 ttaccatacatccaaggcaacat 28628284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 45558445 - 45558352
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactct 161  Q
    |||||||||||||||| ||||| |||| ||| |||| |||||||||| |||||||||||  ||||||||||||||||  |||||| ||| ||||    
T  45558445 tacagaatccacaggtattctctctacgtgcacaaaccacctaagtcgagtttctaccaacttttctactataggtggtaccccaactctctct 45558352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 18637709 - 18637569
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgactcctctctatctgatcta-----ctatatacagaatccacaggtcttctcactacatgcccaaa 103  Q
    ||||||||||||| ||| ||| ||||||||||||||||  ||| ||||||||||     |||  || | |||| ||| |||||||| |||||||| ||||    
T  18637709 tttttctaggtctacccatacatctagtgatttgactctcctcgatctgatctaatctcctaactatataatctacatgtcttctctctacatgctcaaa 18637610  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtg 144  Q
     ||||||||| ||||||||||||| |||| || ||||||||    
T  18637609 ccacctaagtttagtttctaccatcttttataatataggtg 18637569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 18651143 - 18651003
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgactcctctctatctgatcta-----ctatatacagaatccacaggtcttctcactacatgcccaaa 103  Q
    ||||||||||||| ||| ||| ||||||||||||||||  ||| ||||||||||     |||  || | |||| ||| |||||||| |||||||| ||||    
T  18651143 tttttctaggtctacccatacatctagtgatttgactctcctcgatctgatctaatctcctaactatataatctacatgtcttctctctacatgctcaaa 18651044  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtg 144  Q
     ||||||||| ||||||||||||| |||| || ||||||||    
T  18651043 ccacctaagtttagtttctaccatcttttataatataggtg 18651003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 42187553 - 42187397
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||| |||| ||||| ||||||  |||||||||||| |||||||| ||| |||| ||||| ||||||| ||||||||  |||||     ||||||| |||    
T  42187553 tacataatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctacccc----gactctctttct 42187458  T
Q  168 aatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| || ||||||||| |   | |||||||||||||| ||||||||||| |||||||||||    
T  42187457 aatgctgccatttctaa-tatatcccgtctagtcttactacacatccaacacaacatcctca 42187397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 12841487 - 12841631
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  ||| |    ||||||||||||||||  ||||||     
T  12841487 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacctc----cactctctctctaatggggtcattc 12841582  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||| ||||||| |||||||| |||||||||||    
T  12841583 ctaatcctatcatgtctagttttaccactcatccaacacaacatcctca 12841631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 226
Target Start/End: Original strand, 46356069 - 46356209
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| ||||||||||||| || ||||  ||| |||||||||  ||||||||||||||||  |||||    || ||||||||| ||| ||||||| |    
T  46356069 gtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccc----cattctctctctgatggtgtcattcc 46356164  T
Q  182 taattcggttccgtctagtcttaccacacatccaacgcaacatcc 226  Q
    |||| |  | | ||||||||||||||| ||| |||||||||||||    
T  46356165 taatcctatcctgtctagtcttaccactcattcaacgcaacatcc 46356209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 229
Target Start/End: Original strand, 19262589 - 19262787
Alignment:
Q  29 cctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttcta 123  Q
    ||||||||||||||||| | ||| |||||||||||| |      |||| |||| |||||||||||| |||||||| |||| |||||||| | ||||||||    
T  19262589 cctctagtgatttgactacactccatctgatctactcttcttactaca-aatctacaggtcttctctctacatgctcaaaccacctaagccaagtttcta 19262687  T
Q  124 ccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaaca 223  Q
    |||| |||||||| |||||||  ||||||       ||||||||||| ||||||||||||| ||  |   ||||||| |||||||| |||  ||| ||||    
T  19262688 ccatcttttctacaataggtgctacccca------actctctctaatattgtcatttctaactctatcatgtctagtattaccacatatcacacgtaaca 19262781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 12966105 - 12966000
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    ||||||||  || ||||||||| ||||||||||||| ||||||||  ||||||| ||||| |||||| |||||||||  || |||| || ||| ||||||    
T  12966105 tacagaatttacgggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgctactccagttctctccctctct 12966006  T
Q  168 aatgtt 173  Q
    ||||||    
T  12966005 aatgtt 12966000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 27021906 - 27022062
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccca----------gctcactctctctctaatgt 172  Q
    ||||||| ||||||||||||| |||||||| |||||||  ||||  ||||||||||||||||  ||||||           ||| |||||||||||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctaccccaactctctctctctctctctctctctaatgt 27022005  T
Q  173 tgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||| |||| |  | | ||||||||||| ||||||||||| ||||||| ||||    
T  27022006 tgtcatttttaatcctatcctgtctagtcttatcacacatccaatgcaacattctca 27022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 40008704 - 40008769
Alignment:
Q  160 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||||||||||||||||||||||||||||  ||  ||||||| ||||||||||||| ||||||||||    
T  40008704 ctctctctaatgttgtcatttctaattcttttttgtctagttttaccacacatcctacgcaacatc 40008769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 43281744 - 43281602
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||      | |||||||||||| |||||||     
T  43281744 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc------cactctctctaatggtgtcattc 43281651  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| |||||| |||||||||||||    
T  43281650 ctaatcctatattgtctagtcttaccactcatccagcgcaacatcctca 43281602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 227
Target Start/End: Original strand, 44855384 - 44855526
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  |||||||||||||||   | |||    |||||||||||||||| |||||||     
T  44855384 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtactatccc----cactctctctctaatggtgtcattc 44855479  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||||| |  |   ||||||||||||||| |||||| | |||||||||    
T  44855480 ctaatcctatcatgtctagtcttaccactcatccagcacaacatcct 44855526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 25579277 - 25579427
Alignment:
Q  69 acagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctcta 168  Q
    |||||||| ||| |||||||| |||||| |||||| |||||||| ||| |||| |||||||||||| |||| ||||  || |     | | |||||||||    
T  25579277 acagaatctacatgtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgctatgggtgctactc-----cccactctctcta 25579371  T
Q  169 atgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| |||||||||||     | |  |||||| ||||||||||||||||||||||||||||    
T  25579372 atgtggtcatttctaa-----tcctatctagtattaccacacatccaacgcaacatcctca 25579427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 29653844 - 29653904
Alignment:
Q  163 tctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaaca 223  Q
    ||||||||| |||||||||||||||  | ||||||||| ||||||||||||||||||||||    
T  29653844 tctctaatgatgtcatttctaattctatcccgtctagtgttaccacacatccaacgcaaca 29653904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 6374938 - 6374838
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||| |||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  6374938 ggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 6374843  T
Q  181 ctaat 185  Q
    |||||    
T  6374842 ctaat 6374838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 41948594 - 41948486
Alignment:
Q  73 aatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgt 172  Q
    |||||| |||||||||| ||||||||||||| ||| |||| |||||||| ||||| ||||||| | || |||  || |||    |||||| |||||||||    
T  41948594 aatccagaggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttctattgtaagtgctacgcca----actctcactctaatgt 41948499  T
Q  173 tgtcatttctaat 185  Q
    |||||||||||||    
T  41948498 tgtcatttctaat 41948486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 7189442 - 7189524
Alignment:
Q  85 ttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    ||||| ||||||||||||| ||||||||  || |||||||||| ||||||||||||||||  |||||| ||| |||| |||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgaccccaactctctctttctct 7189524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 38607074 - 38606936
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||   |||||||||||||||  |||||    |||||||||| |||||||||||||     
T  38607074 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacctttctactataggtgctacccc----cactctctct-taatgttgtcattc 38606980  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacat 224  Q
    ||||| |  |   ||||||||||||||| |||||| ||||||||    
T  38606979 ctaatcctatcatgtctagtcttaccactcatccagcgcaacat 38606936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 43491378 - 43491308
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccc 151  Q
    ||||||||| ||||||||||||| || ||||| ||| ||||||||| ||||| |||||||||||| |||||    
T  43491378 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttatactataggtgttacccc 43491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 35559205 - 35559350
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactat-aggtgtcaccccagctcactctctctctaatgttgtcatt 179  Q
    ||||||||||||| ||| |||||||| ||||| ||| |||||||||  ||||||||||| |||||  |||||    ||||||||||| |||| |||||||    
T  35559205 ggtcttctcactaaatgtccaaatcatctaagcctattttctaccaacttttctactataaggtgctacccc----cactctctctcaaatggtgtcatt 35559300  T
Q  180 tctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     ||||| |  |    |||  ||||||||| ||||||||||||||||||||    
T  35559301 cctaatcctatcaaatctgatcttaccactcatccaacgcaacatcctca 35559350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 29650454 - 29650391
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| ||||||| ||||| || ||||| ||| ||||||||| |||||||||||||||||    
T  29650454 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaatttttctactataggtg 29650391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 36651987 - 36651920
Alignment:
Q  162 ctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||| ||||||| ||||| |  | | ||||||||||||||| ||||||||||||||||||||    
T  36651987 ctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 36651920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 46014393 - 46014492
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||  || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| ||||||||    
T  46014393 ggtcttctctctacatgtccaac-catctaagcctattttctaccaacttttctactataggtgcaacccc----cactctctctctaatggtgtcattt 46014487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 7220813 - 7220751
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||| ||||||||||||| |||||||| | |||||||| ||| |||||||| |||||||    
T  7220813 gtcttctctctacatgcccaaaccacctaagccaagtttctatcatcttttctacaataggtg 7220751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 7273112 - 7273046
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||||||  |||||||||||| || ||||| ||| |||||||||  ||||||||||||||||    
T  7273112 acaggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 7273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 35713764 - 35713706
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactata 140  Q
    |||||||| ||||||||||||| |||||||| ||| |||| ||||||||||| ||||||    
T  35713764 gtcttctctctacatgcccaaaccacctaagcctattttccaccattttttcaactata 35713706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 38920859 - 38920801
Alignment:
Q  86 tctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||| ||||||||||||| ||| |||| |||||||| ||||| ||||||||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtg 38920801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 2885936 - 2885997
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||    
T  2885936 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 2885997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 19119559 - 19119608
Alignment:
Q  10 ttttctaggtcttcccctacctctagtgatttgactcctctctatctgat 59  Q
    ||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  19119559 ttttctaggtcttccactacctctagtgatttgactctcctccatctgat 19119608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 26742029 - 26742086
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||| ||||||| || ||||||||||| |||||  |||||||||||||||||    
T  26742029 agtttttctacgtcttcctctgcctctagtgatctgactattctctatctgatctact 26742086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 28021032 - 28020938
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    ||||||| ||||||||||||| |||||||| | |||||| ||||| |||||||| ||| |||  ||||||    ||||| ||||||||||| |||||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctacccca----actctttctctaatgttatcatttc 28020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 30914681 - 30914742
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggt 143  Q
    ||||||||  |||||||||||| |||| ||| | ||||||||||||||||||||| ||||||    
T  30914681 gtcttctcgttacatgcccaaaccaccaaagccgagtttctaccattttttctacaataggt 30914742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 40830295 - 40830230
Alignment:
Q  79 caggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||||| || |||||||||| |||||||||  |||||||||||| |||||| | |||||||    
T  40830295 caggtcttctctcttcatgcccaaaccacctaagtagagtttctaccatcttttcttcaataggtg 40830230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 47796359 - 47796476
Alignment:
Q  92 tacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggtt 191  Q
    |||||||||||| |||||| | ||| |||| ||||  ||||||||||||| ||  || ||| |||  ||||| |||||| |||||||||||||| |  |     
T  47796359 tacatgcccaaaccacctacgcctattttcaaccaccttttctactatagttggtactccaactc--tctctatctaatattgtcatttctaatcctatc 47796456  T
Q  192 ccgtctagtcttaccacaca 211  Q
    || |||||||||||||||||    
T  47796457 ccatctagtcttaccacaca 47796476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 22349690 - 22349627
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| ||||||||| ||| || ||||| ||| |||||||||  ||||||||||||||||    
T  22349690 ggtcttctctctacatgccaaaaccatctaagcctattttctaccaacttttctactataggtg 22349627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 28542173 - 28542239
Alignment:
Q  162 ctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||| ||| ||||||||||||  | ||  |||||||||||||||||||||||||||| |||||    
T  28542173 ctctctaatattgccatttctaattctatccca-ctagtcttaccacacatccaacgcaacaccctca 28542239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 6420689 - 6420747
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctacca 126  Q
    ||||| ||| ||| |||||||| ||||||||||||| |||||||| |||||||| ||||    
T  6420689 tacagtatctacaagtcttctctctacatgcccaaaccacctaagcctagtttccacca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 23720898 - 23720813
Alignment:
Q  94 catgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctct--ctaatgttgtca 177  Q
    |||||||||| |||||||| ||||| ||  |||| ||||||||||||||||  |||| | ||| ||||||||  ||||||||||||    
T  23720898 catgcccaaaccacctaaggctagtctccgccatcttttctactataggtgcaaccctaactctctctctctcactaatgttgtca 23720813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 24549899 - 24549945
Alignment:
Q  75 tccacaggtcttctcactacatgcccaaatcacctaagtctagtttc 121  Q
    ||||| ||||||||| ||||||||||||| |||||||| ||||||||    
T  24549899 tccacgggtcttctctctacatgcccaaaccacctaagcctagtttc 24549945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 24549973 - 24550043
Alignment:
Q  159 tctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| |||||||||| |||||||||||    |||  ||||||||||| ||||||||||| |||||||||||    
T  24549973 tctcactctaatgttatcatttctaatcatattctatctagtcttacaacacatccaacacaacatcctca 24550043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 40169718 - 40169660
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactata 140  Q
    ||||| || ||||||||||||| |||||||| ||| |||| ||||| ||||||||||||    
T  40169718 gtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactata 40169660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 187
Target Start/End: Original strand, 48202974 - 48203004
Alignment:
Q  157 actctctctctaatgttgtcatttctaattc 187  Q
    |||||||||||||||||||||||||||||||    
T  48202974 actctctctctaatgttgtcatttctaattc 48203004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 32043739 - 32043522
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| | |      ||||  |||||||||||||||| ||||||| |||    
T  32043739 agtttttttaggtcttcccctacctctagtgatttgacacccctccatctgatctattctccttactacaacatccacaggtcttctctctacatggcca 32043640  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || |||| |||||||||||||||||| |||| |||||||||||  ||||||    |||||||||||||||||||||||||||||||  | ||||||||||    
T  32043639 aaccaccaaagtctagtttctaccatcttttgtactataggtgatacccca----actctctctctaatgttgtcatttctaattctatcccgtctagtc 32043544  T
Q  202 ttaccacacatccaacgcaaca 223  Q
    ||||||||||||||||||||||    
T  32043543 ttaccacacatccaacgcaaca 32043522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 214
Target Start/End: Complemental strand, 25985667 - 25985462
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| |||||||||||||||||||||| ||  |||||||||| | |      | || ||| |||| |||||||| | ||||||| |    
T  25985667 agtttttctaggtcttcctctacctctagtgatttgactcccctacatctgatctagtctccttacttcaaaattcacatgtcttctctc-acatgccaa 25985569  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    ||||||  |||||||||||||||||| ||||||||||||||||  ||||||       ||||||||||||||||| ||||||||||  | | |||| |||    
T  25985568 aatcacgcaagtctagtttctaccatcttttctactataggtgctacccca------actctctctaatgttgtcgtttctaattctatcctgtcttgtc 25985475  T
Q  202 ttaccacacatcc 214  Q
    |||||||||||||    
T  25985474 ttaccacacatcc 25985462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 229
Target Start/End: Original strand, 36395158 - 36395306
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaa-gtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtc 176  Q
    |||||||||||| ||||||||||||| || |||| | ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| ||||    
T  36395158 acaggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtc 36395253  T
Q  177 atttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||| ||||| |  | | ||||||||||||||| ||||||||||||||||||||    
T  36395254 attcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 36395306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 36545219 - 36545073
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||| |||||  | | |||||||||||||| |||||||     
T  36545219 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttacccc--cactctctctctctaatggtgtcattc 36545122  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| |||||||| |||||||||||    
T  36545121 ctaatcctatcatgtctagtcttaccactcatccaacacaacatcctca 36545073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 36565457 - 36565597
Alignment:
Q  85 ttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaa 184  Q
    ||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| ||||||| ||||    
T  36565457 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattcctaa 36565552  T
Q  185 ttcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    | |  | | ||||||||||||||| ||||||||||| ||||||||    
T  36565553 tcctatcctgtctagtcttaccactcatccaacgcatcatcctca 36565597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 10080040 - 10080257
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccacaggtcttctcactacatgccca 101  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||  || ||||||||| |      |||| ||||| ||||||||||| |||||||||||    
T  10080040 agtttctctaggtcttcctctacctctagtgatttgactccccttcatttgatctactctccttactacaaaatcctcaggtcttctctctacatgccca 10080139  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || || | | | |||||||| ||||| ||||||||| ||| ||  ||| ||    |||||||||||||||||||||||||||||    |  |||||||||    
T  10080140 aaccatc-aggcctagtttccaccatcttttctact-tagatgctacctca----actctctctctaatgttgtcatttctaatcttatctcgtctagtc 10080233  T
Q  202 ttaccacacatccaacgcaacatc 225  Q
    |||||| ||| |||||||||||||    
T  10080234 ttaccaaacacccaacgcaacatc 10080257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 225
Target Start/End: Complemental strand, 45419384 - 45419169
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat--atac-agaatccacaggtcttctcactacatgcccaaa 103  Q
    |||||||||||||||||| ||||||||   ||| ||||||  ||| |||||||||||| |  |||| ||  || ||||||||| || |||||||||||||    
T  45419384 agtttttctaggtcttcctctacctcttcagatctgactctcctccatctgatctactcttcatactagcctctacaggtcttatctctacatgcccaaa 45419285  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtctt 203  Q
     |||||||||||| ||| |||||| ||||||||||||||||  ||||||        ||||||||||| ||||||| |||||    | || |||||||||    
T  45419284 ccacctaagtctattttataccatcttttctactataggtgctacccca------attctctctaatggtgtcattcctaatcttatcccttctagtctt 45419191  T
Q  204 accacacatccaacgcaacatc 225  Q
    |||||  |||||||||||||||    
T  45419190 accactaatccaacgcaacatc 45419169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 16351386 - 16351320
Alignment:
Q  159 tctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||||    
T  16351386 tctctctctaatgttgtcatttctaactctattccgtctagtcttaccacatatccaacgcaacatc 16351320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 229
Target Start/End: Original strand, 30456441 - 30456567
Alignment:
Q  98 cccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtct 197  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||  || | |    ||| |||||||||||| ||||||||||||||  | || | |    
T  30456441 cccaaaccacataagtctagtttctaccatcttttctactataggtgcaactcga----actatctctctaatgtcgtcatttctaattctatcccat-t 30456535  T
Q  198 agtcttaccacacatccaacgcaacatcctca 229  Q
     |||||||||||||||||||||||||||||||    
T  30456536 ggtcttaccacacatccaacgcaacatcctca 30456567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 229
Target Start/End: Original strand, 13171875 - 13172005
Alignment:
Q  95 atgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccg 194  Q
    ||||||||| ||||||||  || |||| ||||| ||||||||||||||||   |||||    |||||||||||||| |||||||||||||| |  | |||    
T  13171875 atgcccaaaccacctaagcatattttccaccatcttttctactataggtgcttcccca----actctctctctaatcttgtcatttctaatcctatcccg 13171970  T
Q  195 tctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||| |||||||||| ||||||| ||||    
T  13171971 tctagtcttactacacatccaatgcaacattctca 13172005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 9695712 - 9695599
Alignment:
Q  70 cagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaa 169  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||| | |||||| ||||| ||||||||||||||||  ||||||    | | ||||| |||    
T  9695712 cagaatctacaggacttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctacccca----aatatctctataa 9695617  T
Q  170 tgttgtcatttctaattc 187  Q
    ||||||||||||||||||    
T  9695616 tgttgtcatttctaattc 9695599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 29520694 - 29520586
Alignment:
Q  118 tttctaccattt-tttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaa 216  Q
    |||| ||||||| |||||||||||| || |||||||    ||||||||||||||| | ||||||||||| |  | || ||||||||||||||||||||||    
T  29520694 tttccaccatttatttctactatagatgccacccca----actctctctctaatggtatcatttctaatcctatcccatctagtcttaccacacatccaa 29520599  T
Q  217 cgcaacatcctca 229  Q
    |||||||||||||    
T  29520598 cgcaacatcctca 29520586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 34196287 - 34196166
Alignment:
Q  25 cctacctctagtgatttgactcctctctatctgat----ctactatatacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagttt 120  Q
    ||||||||||||||||||||| | ||| |||||||    || ||   |||||||||| |||||||||||  |||||||||||| ||| ||||||||||||    
T  34196287 cctacctctagtgatttgacttccctccatctgattactctccttagtacagaatccccaggtcttctc--tacatgcccaaaccacataagtctagttt 34196190  T
Q  121 ctaccattttttctactataggtg 144  Q
    ||||  ||||||||||||||||||    
T  34196189 ctactgttttttctactataggtg 34196166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 25985735 - 25985912
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaa 103  Q
    ||||||||| ||| ||||||||||||| ||| |||||||  || |||||||||||| |      |||| ||| ||||||||||||| ||| |||| ||||    
T  25985735 tttttctagatctacccctacctctagcgatctgactcccttccatctgatctactctccttactacaaaattcacaggtcttctctctaaatgcacaaa 25985834  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
     ||  |||||||||||||||| |  ||||||||||||||||  |||||| |   ||||||||||||||| |||||||||    
T  25985835 ccaa-taagtctagtttctacaaacttttctactataggtgctaccccaacaatctctctctctaatgtcgtcatttct 25985912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 39953397 - 39953620
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||| |||||||| ||||||||||||||||| ||| ||  ||  |||||||||||| |      |||| |||||| |||||  ||| ||||||||| |    
T  39953397 agttttcctaggtctacccctacctctagtgatctgattcgccttcatctgatctactctccttactacataatccataggtcacctctctacatgccta 39953496  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || ||||||| ||||||||||||||| ||||||  ||||||||  | ||||    ||||||||||||||||  | ||||||||||   |   || || ||    
T  39953497 aaccacctaaatctagtttctaccatcttttctcatataggtgctatccca----actctctctctaatgtcattatttctaattatatcatgtttaatc 39953592  T
Q  202 ttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||||||| ||||    
T  39953593 ttaccacacatccaacgcaacattctca 39953620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 227
Target Start/End: Complemental strand, 40813397 - 40813250
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||| ||||||| ||||||||||||| || ||||  ||| |||||||||  ||||||||||||||||  |||||  | | |||||||||||||| |||||    
T  40813397 acagatcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccc--cactctctctctctaatggtgtca 40813300  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||  |||| |  ||  ||||||||||||||| |||||||| |||||||||    
T  40813299 ttcttaatcctattatgtctagtcttaccactcatccaacacaacatcct 40813250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 34196153 - 34196079
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||| |||||||||||  |||||||||||| ||| ||||||||||||||||  ||||||||||||||||||    
T  34196153 tacagaatccccaggtcttctc--tacatgcccaaaccacataagtctagtttctactgttttttctactataggtg 34196079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 225
Target Start/End: Original strand, 42854216 - 42854356
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  || ||| |||||||||| |||||    |||||||||||| ||| |||||||     
T  42854216 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttctctgctataggtgttacccc----cactctctctctgatggtgtcattc 42854311  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||||| |  ||| |||||||||||||||  ||||| |||||||||    
T  42854312 ctaatcctattctgtctagtcttaccacttatccagcgcaacatc 42854356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 39946930 - 39946783
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||||||  ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||| ||| ||||| |||||    
T  39946930 acaggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctttctataatggtgtca 39946835  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||  |||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  39946834 ttcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 39946783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 36069638 - 36069570
Alignment:
Q  160 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctc 228  Q
    ||||||||||||||||| ||||||||    | |||||||||||||||||||||||||| ||||||||||    
T  36069638 ctctctctaatgttgtcgtttctaatcttatcccgtctagtcttaccacacatccaacacaacatcctc 36069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 8879652 - 8879715
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| |||||| ||||||||| ||||||||| |||||||||  ||||||||||||||||    
T  8879652 ggtcttctctctacatacccaaatcatctaagtctattttctaccaacttttctactataggtg 8879715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 30748537 - 30748385
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaat 170  Q
    |||||| |||||||||||| ||||||||||||| |||||||| || | ||| ||||| ||||||||||  ||||  ||| ||       |||||| ||||    
T  30748537 agaatctacaggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctactactggtgcgaccaca------actctctgtaat 30748444  T
Q  171 gttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||| |  |   ||||| ||| ||||||||||||||| ||||||||||    
T  30748443 gttgtcatttctaatcctatcatgtctaatctaaccacacatccaacgaaacatcctca 30748385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 29700425 - 29700283
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| |||||||||||||| |||||   ||| |||| ||||||| |      |||||||||||  |||||| || ||| |||||||    
T  29700425 agtttttctaggtcttcctctacctctagtgatatgactatcctccatctaatctactctccttactacagaatccaatggtcttttctctatatgccca 29700326  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    || |||||||| | | ||||  |||| ||||||||||||||||    
T  29700325 aaccacctaagccaactttcctccatcttttctactataggtg 29700283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 2776431 - 2776528
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg-tcaccccagctcactctctctct 167  Q
    |||||| || ||||||||| | ||||||||||| |||||||| | ||||||||||||  ||||||| ||||||| |  ||||||||| ||||||||||    
T  2776431 agaatctacgggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctacccccagctctctctctctct 2776528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 2796622 - 2796481
Alignment:
Q  86 tctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaat 185  Q
    |||| ||||||||||||| || ||||| ||| |||||||||  |||||||||||||| |  |||||    |||||||||||||||| ||||||| |||||    
T  2796622 tctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggcgctacccc----cactctctctctaatggtgtcattcctaat 2796527  T
Q  186 tcggttccgtc--tagtcttaccacacatccaacgcaacatcctca 229  Q
     |  |   |||  |||||||||||| |||||| |||||||||||||    
T  2796526 cctatcatgtctatagtcttaccactcatccagcgcaacatcctca 2796481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 7531777 - 7531834
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| ||| ||||||||||||    
T  7531777 agtttttctaggtctacccttacctctagtgatctgactcccctccatctgatctact 7531834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 16705757 - 16705700
Alignment:
Q  160 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaac 217  Q
    ||||||||||||||||||||||||||||  | || ||||||||||||||||| |||||    
T  16705757 ctctctctaatgttgtcatttctaattctatcccatctagtcttaccacacaaccaac 16705700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 43732639 - 43732562
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgt 145  Q
    |||| |||||||| |||||||   ||||||  |||| ||||||||||| ||||||||||| |||||||||||||||||    
T  43732639 tacaaaatccacatgtcttctttttacatgtgcaaaccacctaagtcttgtttctaccatcttttctactataggtgt 43732562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 79126 - 78988
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctag---tttctaccattttttctactataggtgtcaccccagctcactctctc 164  Q
    |||| |||| ||||||||||||  |||||||||||| |||||||| ||||   ||||||||||  |||||||| ||||||| |||| |    |  |||||    
T  79126 tacaaaatctacaggtcttctctatacatgcccaaaccacctaagcctagtaatttctaccatcatttctactgtaggtgttacccga----atgctctc 79031  T
Q  165 tctaatgttgtcatttctaattcggttccgtctagtcttacca 207  Q
    |||||||||||  |||||||| |  | ||||||||||||||||    
T  79030 tctaatgttgttgtttctaatcctatcccgtctagtcttacca 78988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 12491350 - 12491413
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||    
T  12491350 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 12491413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 12611613 - 12611523
Alignment:
Q  73 aatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctct 163  Q
    ||||||||||| ||||  |||||| | |||| |||||||| |||||||| ||||| ||||||||| ||||||  || ||||||| ||||||    
T  12611613 aatccacaggtgttctgtctacatacgcaaaccacctaagcctagtttccaccatcttttctactttaggtgctacaccagctctctctct 12611523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 16351527 - 16351470
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||||||||||||||| |||| ||| ||||| |||||||| ||| ||||||||||||    
T  16351527 agtttttctaggtcttctcctatctcaagtgacttgactcccctccatctgatctact 16351470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 38178393 - 38178450
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||||| |||||||||| |||||||||   ||| ||||||||||||    
T  38178393 agtttttctaggtcttcctctacctctagcgatttgactatcctccatctgatctact 38178450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 38409155 - 38409212
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||||||||||||| |||||||||| |||| ||||||||  ||| ||||||||||||    
T  38409155 agtttttctaggtctacccctacctccagtggtttgactctcctccatctgatctact 38409212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 39051202 - 39051068
Alignment:
Q  91 ctacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggt 190  Q
    |||||| |||||| |||||||  | ||||||| |||| ||||| |  |||||||| | ||||    |||||||||| ||| ||||||||||||||||  |    
T  39051202 ctacatacccaaaccacctaaaccgagtttctgccatcttttcaatgataggtgttatccca----actctctctcgaatattgtcatttctaattctat 39051107  T
Q  191 tccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
       |||| ||||||||||||||| ||| |||||||||||    
T  39051106 catgtcttgtcttaccacacatctaacacaacatcctca 39051068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 18474159 - 18474235
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||| || | |||||||| |||||||| |||| || ||||| |||||||| |||||  |||||||||||||||    
T  18474159 tacagaattcagatgtcttctctctacatgctcaaaccaactaagcctagtttccaccatcatttctactataggtg 18474235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 36143448 - 36143372
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| | ||||||| || ||| ||||||||| |||||||||||| |||| ||||| | |||| |||||||||    
T  36143448 tacagaatctataggtcttttctctaaatgcccaaaccacctaagtctattttccaccatctattctgctataggtg 36143372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 7103316 - 7103277
Alignment:
Q  105 cacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  7103316 cacctaagcctagtttctaccatcttttctactataggtg 7103277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 12492163 - 12492198
Alignment:
Q  194 gtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||| ||||||||||||||||||||    
T  12492163 gtctagtcttaccactcatccaacgcaacatcctca 12492198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 15215556 - 15215627
Alignment:
Q  158 ctctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||| ||||||||||||| |  | | || |||||||||||| |||||| | |||||||||||    
T  15215556 ctctctctctaatggtgtcatttctaatcctatcctgtatagtcttaccactcatccagcacaacatcctca 15215627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 42493536 - 42493660
Alignment:
Q  99 ccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtcta 198  Q
    ||||| |||||||| |||||||| || || ||||||||||||||||| ||||||       ||||||| |||||||||||||  ||| |  |   | |||    
T  42493536 ccaaaccacctaagcctagtttccacaatcttttctactataggtgttacccca------actctctccaatgttgtcatttacaatccaatcttgacta 42493629  T
Q  199 gtcttaccacacatccaacgcaacatcctca 229  Q
     |||||||||||| |||||||||||||||||    
T  42493630 atcttaccacacaaccaacgcaacatcctca 42493660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 44681393 - 44681432
Alignment:
Q  190 ttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  44681393 ttccgtctagtcttaccacacatccaatacaacatcctca 44681432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 5908675 - 5908612
Alignment:
Q  118 tttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaat 185  Q
    |||| ||||| |||||||||||||||   ||||||    |||||||||||||||||||||||||||||    
T  5908675 tttcaaccatcttttctactataggttctacccca----actctctctctaatgttgtcatttctaat 5908612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 35643814 - 35643872
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactata 140  Q
    |||||||| ||||||||||||| ||||||||  || |||| ||||| ||||||||||||    
T  35643814 gtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctactata 35643872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 229
Target Start/End: Complemental strand, 43732527 - 43732493
Alignment:
Q  195 tctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||||||| ||||||||||    
T  43732527 tctagtcttaccacacatccaacgtaacatcctca 43732493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 45512628 - 45512666
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgact 45  Q
    |||||||||||||||||| || |||||||||||||||||    
T  45512628 agtttttctaggtcttcctctgcctctagtgatttgact 45512666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 18125243 - 18125145
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||  |||| || ||||| ||| |||||||||  ||||||||||||||||  |||||      | |||||||||||| ||||||||    
T  18125243 ggtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgctacccc------cactctctctaatggtgtcattt 18125150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 30783331 - 30783396
Alignment:
Q  164 ctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||||| |  | |  ||||||||| ||||| ||||||||||| |||||||    
T  30783331 ctctaatgttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaagatcctca 30783396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 37826440 - 37826383
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||| ||||||||| || || ||||||||||||||||| ||||  ||||||||||||    
T  37826440 agtttatctaggtctccctctgcctctagtgatttgactactcttcatctgatctact 37826383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 41444548 - 41444601
Alignment:
Q  91 ctacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||| ||||| |||||||  |||||||| ||||| ||||||||||||||||    
T  41444548 ctacatgtccaaaccacctaaacctagtttccaccatcttttctactataggtg 41444601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 2216435 - 2216399
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgact 45  Q
    |||||||||||||||| |||||||||||||| |||||    
T  2216435 tttttctaggtcttcctctacctctagtgatctgact 2216399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 2518680 - 2518747
Alignment:
Q  161 tctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||| |||||||||||||| |  |  | |||||||||||||||||||||| ||||||| ||||    
T  2518680 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctca 2518747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 11523935 - 11524036
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaa-gtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatt 179  Q
    ||||||||| ||||||||||||| || |||| | ||| |  ||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||    
T  11523935 ggtcttctctctacatgcccaaaccatctaaagcctattaactaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcatt 11524030  T
Q  180 tctaat 185  Q
     |||||    
T  11524031 cctaat 11524036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 21121157 - 21121105
Alignment:
Q  156 cactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccac 208  Q
    |||||||||||||||| || |||||||||| |  | |||||||||||||||||    
T  21121157 cactctctctctaatggtgccatttctaatcctatcccgtctagtcttaccac 21121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 33511439 - 33511355
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccca 152  Q
    ||||||||| | |||||||||| ||  || | |||| |||||||||||| |||  | |||||||||||| |||||||| ||||||    
T  33511439 tacagaatctataggtcttctctctgtatactcaaaccacctaagtctatttttcatcattttttctaccataggtgttacccca 33511355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 7e-42; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 229
Target Start/End: Complemental strand, 17900613 - 17900406
Alignment:
Q  23 cccctacctctagtgatttgactcctctctatctgatctact-----atatacagaatccacaggtcttctcactacatgcccaaatcacctaagtctag 117  Q
    |||||||||||| |||| ||||||||||| ||||||||||||     || |||| ||||||||||||||||| |||| |||||||| ||| | |||||||    
T  17900613 cccctacctctaatgatctgactcctctccatctgatctactctcctatctacataatccacaggtcttctctctacgtgcccaaaccacatgagtctag 17900514  T
Q  118 tttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaac 217  Q
    |||||||| | ||||||||||||||||  ||||||    ||||  |||||||||| |||||||||||||   | || |||||||||||||||||||||||    
T  17900513 tttctaccgtcttttctactataggtgctacccca----actccgtctctaatgtcgtcatttctaattttatcccatctagtcttaccacacatccaac 17900418  T
Q  218 gcaacatcctca 229  Q
    ||||||||||||    
T  17900417 gcaacatcctca 17900406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 46372173 - 46371992
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||||||||||||||||| || |||| ||||||||||||| || |      ||||||||||||| |||||||| |||||||| ||    
T  46372173 agtttttctaggtctacccctacctctagtgatctggctcccctctatctgatctgctcttcttagtacagaatccacatgtcttctctctacatgcaca 46372074  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattc 187  Q
    || |||||||||||||||||||| || ||||| ||||||||||  ||||||    ||||| ||||||||||  |||||||||||||    
T  46372073 aaccacctaagtctagtttctacaatattttcgactataggtgctacccca----actctatctctaatgtcatcatttctaattc 46371992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 41192919 - 41192763
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||||||||| ||||| ||||||||| ||||||  |||||| ||  ||||||||||    
T  41192919 tacagaatctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctaccccaact--ctctctctct 41192822  T
Q  168 aatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcc 226  Q
    || | |||||||| |||||   | | ||||| || ||||||||||||||||||||||||    
T  41192821 aacgctgtcatttataattgtatcctgtctaatcataccacacatccaacgcaacatcc 41192763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 35555780 - 35555945
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||||||||||||||||    ||||  |||||||| ||||||| |      |||||||||||||||||||||| ||| |||||||    
T  35555780 agtttttctaggtctacccctacctctagtgacccaactctcctctatctaatctactctcctaactacagaatccacaggtcttctctctaaatgccca 35555879  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    || ||||||||||||||||||||||| ||||||||||||||||  |||| | ||| ||||||||||    
T  35555880 aaccacctaagtctagtttctaccatcttttctactataggtgctacccgaactctctctctctct 35555945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 2589120 - 2588907
Alignment:
Q  26 ctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagttt 120  Q
    ||||||||||| |||| ||||| ||| |||||||||||| |      ||||||||||||| || ||||| ||||||||| ||| ||||||||||||||||    
T  2589120 ctacctctagtaatttaactcccctccatctgatctactctcctaactacagaatccacaagttttctctctacatgcctaaaccacctaagtctagttt 2589021  T
Q  121 ctaccattttttctactataggtgtcaccccagc------tcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatcc 214  Q
    ||||||| ||||| |||||||||   |||||| |      || ||| ||| |||||||||||||||||||| |  | || ||||||||||||||||||||    
T  2589020 ctaccatcttttc-actataggtactaccccaaccctccctccctccctccctaatgttgtcatttctaatcctatcccttctagtcttaccacacatcc 2588922  T
Q  215 aacgcaacatcctca 229  Q
    |||||||||||||||    
T  2588921 aacgcaacatcctca 2588907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 54470276 - 54470133
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| ||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||  ||||||    ||||||||||||||||||| |||||    
T  54470276 gtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctacccca----actctctctctaatgttgttatttc 54470181  T
Q  182 taattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||    | || |||||||||||||||||||||| ||||||||||||    
T  54470180 aaatcatatcccatctagtcttaccacacatccaatgcaacatcctca 54470133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 224
Target Start/End: Complemental strand, 44360162 - 44360014
Alignment:
Q  75 tccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttg 174  Q
    |||||| |||||||| |||||||||||||  |||||| ||||||||||||||| ||||||||||||||||  |||||| ||| |||||  |||||| |||    
T  44360162 tccacatgtcttctctctacatgcccaaacaacctaa-tctagtttctaccatcttttctactataggtgataccccaactctctctccatctaatattg 44360064  T
Q  175 tcatttctaattcggttccgtctagtcttaccacacatccaacgcaacat 224  Q
    |||||||||||||  |  || |||||| ||||||||||||||| ||||||    
T  44360063 tcatttctaattctatctcgcctagtcctaccacacatccaacacaacat 44360014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 25257717 - 25257929
Alignment:
Q  10 ttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatat-----acagaatccacaggtcttctcactacatgcccaaat 104  Q
    |||| ||||||||||||||||||||||||||||  ||| ||| |||||||||||| |       |||| || ||||||||||||| |||||||| ||||     
T  25257717 ttttttaggtcttcccctacctctagtgatttgtgtcccctccatctgatctactctccttacaacagcattcacaggtcttctctctacatgctcaaac 25257816  T
Q  105 cacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtctta 204  Q
    ||||||||||||| ||||||||| |||| || | ||||||| ||| ||       ||||||||||||||||||||||||||||  |   |||||||||||    
T  25257817 cacctaagtctagcttctaccatcttttatattgtaggtgttacctca------actctctctaatgttgtcatttctaattctatcatgtctagtctta 25257910  T
Q  205 ccacacatccaacgcaaca 223  Q
    | ||||||||||| |||||    
T  25257911 ctacacatccaacacaaca 25257929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 26356768 - 26356625
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |      ||||  | ||||| |||||||| |||  ||||||    
T  26356768 agtttttctaggtcttcccctacctctagtgatttgactcccctccatccgatctactctccttactacaatacccacatgtcttctctctaagtgccca 26356669  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgt 145  Q
    || |||||||||||| |||||||||| |||||||||||||||||    
T  26356668 aaccacctaagtctattttctaccatcttttctactataggtgt 26356625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 31960026 - 31960170
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  31960026 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 31960121  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | | ||||||||||||||| ||||||||||||||||||||    
T  31960122 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 31960170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 48174305 - 48174449
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||| |||||    |||||||||||||||| |||||||     
T  48174305 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgttacccc----cactctctctctaatggtgtcattc 48174400  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||    |   ||||||||||||||| ||||||||||||||||||||    
T  48174401 ctaatcatatcatgtctagtcttaccactcatccaacgcaacatcctca 48174449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 42285837 - 42285972
Alignment:
Q  10 ttttctaggtcttcccctacctctagtgatttgactcctctcta----tctgatctactatatacagaatccacaggtcttctcactacatgcccaaatc 105  Q
    |||||||||||| |||| |||||||||||| ||||||| ||| |    |||| ||| ||   ||||||||||||||||||||||  |||||||||||| |    
T  42285837 ttttctaggtctacccccacctctagtgatctgactcccctccactgatctgctcttctgactacagaatccacaggtcttctctatacatgcccaaacc 42285936  T
Q  106 acctaagtctagtttctaccattttttctactatag 141  Q
    |||||||||||||||||||||| |||||||||||||    
T  42285937 acctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 187
Target Start/End: Original strand, 31897561 - 31897740
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||| |||| ||| ||| |      |||||||||||||||||| ||| |||||||| ||    
T  31897561 agtttttctaggtctacccctacctctagtgatctgactcccctccatctaatcgactctcctaactacagaatccacaggtctgctctctacatgcgca 31897660  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattc 187  Q
    || |||| |||||||||||||||||| ||||||||  ||||||  ||||||    ||| ||||||||||||  |||||||||||||    
T  31897661 aaccacccaagtctagtttctaccatcttttctac--taggtgctacccca----actatctctctaatgtcctcatttctaattc 31897740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 33710007 - 33709849
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||||||||||||| ||||||| | ||||||| ||| |||||||  |||||||| ||||| ||||||||||||||||| ||||||    |||||||||||    
T  33710007 tacagaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtgttacccca----actctctctct 33709912  T
Q  168 aatgttgtcatttctaattcggttc-----cgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||||||| |||||||||| |  | |      ||||||||||||||||||||||||||||||||    
T  33709911 aatgttgccatttctaatcctatcctatcatgtctagtcttaccacacatccaacgcaacatc 33709849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 436302 - 436155
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||||||| |||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||    
T  436302 acaggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtca 436207  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||  |||| |  |   |||||||||||| || ||||||||||||||||||||    
T  436206 ttcttaatcctatcatgtctagtcttacgactcatccaacgcaacatcctca 436155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 31961399 - 31961515
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctga-----tctactatatacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| |     ||| |||  ||||||||||||| |||||||| |||||||||||    
T  31961399 agtttttctaggtctacccctacctctagtgatttgactcctctccatctaatccactctcctaactacagaatccacaagtcttctctctacatgccca 31961498  T
Q  102 aatcacctaagtctagt 118  Q
    || |||| |||||||||    
T  31961499 aaccacccaagtctagt 31961515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 44047550 - 44047703
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaat 170  Q
    |||||| |||||||||  | ||||||| ||||| |||||||| |||| ||||||||  ||||||||||||||||  ||||||    ||||||||||||||    
T  44047550 agaatctacaggtcttaactctacatgtccaaaccacctaagcctagattctaccaccttttctactataggtgctacccca----actctctctctaat 44047645  T
Q  171 gttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctc 228  Q
    |||||||||||||||||  | ||| ||| || |||||| ||| ||| |||||||||||    
T  44047646 gttgtcatttctaattctatcccgcctaatcctaccacgcattcaatgcaacatcctc 44047703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 77 - 216
Target Start/End: Complemental strand, 10209108 - 10208977
Alignment:
Q  77 cacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtc 176  Q
    ||||||||||||| ||||||||||||| || |||||| |||||||| |||| |||||||||||||||   ||||||         |||||||||||||||    
T  10209108 cacaggtcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttctactataggttctacccca--------actctctaatgttgtc 10209017  T
Q  177 atttctaattcggttccgtctagtcttaccacacatccaa 216  Q
    |||||||||||  | || ||||||||||||||||||||||    
T  10209016 atttctaattctatcccatctagtcttaccacacatccaa 10208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 227
Target Start/End: Original strand, 52569727 - 52569869
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  52569727 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 52569822  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||||| |  | | ||||||||||||| | |||||||| |||||||||    
T  52569823 ctaatcctatcctgtctagtcttacccctcatccaacacaacatcct 52569869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 10775658 - 10775774
Alignment:
Q  105 cacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtctta 204  Q
    |||||| |||||||||||||||| ||||||||||||||||| ||||||    || ||||||||||||||||||||||||||||  | | |||| ||| |     
T  10775658 cacctatgtctagtttctaccatcttttctactataggtgttacccca----acactctctctaatgttgtcatttctaattctttcctgtctggtcctg 10775753  T
Q  205 ccacacatccaacgcaacatc 225  Q
    |||| |||||||| |||||||    
T  10775754 ccacgcatccaacacaacatc 10775774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 33191060 - 33191204
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||||||||  | ||||||||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  33191060 ggtcttctctctacatgcccaaacaatctaagtctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 33191155  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | |  |||| ||||||||| |||||| |||||||||||||    
T  33191156 ctaatcctatcctatctaatcttaccactcatccagcgcaacatcctca 33191204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 43433994 - 43433844
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccc--agctcactctctctctaatgttgtcat 178  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    ||| |||||||||||||| ||||||    
T  43433994 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctctctaatggtgtcat 43433895  T
Q  179 ttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    | ||||| |  |   |||||||||| |||| ||||||||||||||||||||    
T  43433894 tcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctca 43433844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 225
Target Start/End: Original strand, 31403228 - 31403372
Alignment:
Q  79 caggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcat 178  Q
    ||||| |||||  |||||||||||  |||||||| |||||||| |||||||| |||||||||||||  |||||| |||  ||| ||||||||||||||||    
T  31403228 caggtgttctctttacatgcccaac-cacctaagcctagtttccaccatttt-tctactataggtgctaccccaactctatctgtctctaatgttgtcat 31403325  T
Q  179 ttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||||||| |  | ||||||| ||| ||||||||| |||| |||||||    
T  31403326 ttctaatcctatcccgtctaatctcaccacacattcaactcaacatc 31403372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 51252663 - 51252814
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaat 170  Q
    |||||||||| |||||||| ||||||||||| | |||||||| |||||||| ||||| |||||||||| |||||  ||||||       |||||||||||    
T  51252663 agaatccacatgtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctacccca------actctctctaat 51252756  T
Q  171 gttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctc 228  Q
    || |||||||||||| |  |  ||||||||||||| ||||||| ||| ||| ||||||    
T  51252757 gtagtcatttctaatcctatctcgtctagtcttacgacacatctaacacaaaatcctc 51252814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 33227279 - 33227135
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||||||||  | ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  33227279 ggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 33227184  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||| |  |   ||||||||||||||| |||||| |||||||||||||    
T  33227183 ttaatcctatcatgtctagtcttaccactcatccagcgcaacatcctca 33227135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 29398967 - 29398745
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| || |||||||||||||||||   ||||||| | |||||| |      ||||||||| | |||||||||| |||||||||||    
T  29398967 agtttttctaggtcttcctctgcctctagtgatttgactatcctctatccggtctactctcctcactacagaatctataggtcttctctctacatgccca 29398868  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || ||| ||||  || |||| ||||| |||||||| |||||||  | | ||    ||||| || ||||| ||||||||| |||| |  |||| |||| ||    
T  29398867 aaccacataagcatattttccaccatcttttctaccataggtgctatcgca----actctttccctaatattgtcatttgtaatccaattccatctaatc 29398772  T
Q  202 ttaccacacatccaacgcaacatcctca 229  Q
    |||||||| |||||| ||||||||||||    
T  29398771 ttaccacaaatccaa-gcaacatcctca 29398745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 12494793 - 12494676
Alignment:
Q  108 ctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttacca 207  Q
    ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| ||||||| ||||| |  |   ||||||||||||||    
T  12494793 ctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattcctaatcctatcatgtctagtcttacca 12494698  T
Q  208 cacatccaacgcaacatcctca 229  Q
    | ||||||||||||||||||||    
T  12494697 ctcatccaacgcaacatcctca 12494676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 46715571 - 46715678
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||| |||||||| |||||||| ||||||||||| | |||||||| |||||||| ||||| |||||||| ||||||         |||| ||||||||||    
T  46715571 tacataatccacatgtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaataggt---------gctctctctctctct 46715661  T
Q  168 aatgttgtcatttctaa 184  Q
    |||||||||||||||||    
T  46715662 aatgttgtcatttctaa 46715678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 21107057 - 21106910
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| ||| |||||||||  ||||||| ||| |||| || ||  |||||||||||| |   ||| || ||| |||| | | |||||||||||||||    
T  21107057 gtcttctctctagatgcccaaactacctaagcctattttcaactatcctttctactatagatactacctcaactctctctatatataatgttgtcatttc 21106958  T
Q  182 taattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||  |  ||||||||||||||||||||| ||| |||||||||||    
T  21106957 taattctatcacgtctagtcttaccacacatcgaacccaacatcctca 21106910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 229
Target Start/End: Complemental strand, 31459098 - 31458954
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    |||||||  |||||||||||| |||||||| ||| |||||||||| ||||||||||||||||  ||| |  ||  || ||||||||||| | ||||| ||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcgact--ctgtctctctaatggtatcattcct 31459001  T
Q  183 aattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||| |  |   ||||||||||||||| || |||||||||||||||||    
T  31459000 aatcctatcatgtctagtcttaccactcaaccaacgcaacatcctca 31458954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 42639152 - 42639295
Alignment:
Q  6 cagtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctac-----tatatacagaatccacaggtcttctcactacatgccc 100  Q
    |||||||||||| | |||| |||||||||||||||||||||| ||| |||| || |||     |    |||||||||| | |||||||| ||||||| ||    
T  42639152 cagtttttctagatattcctctacctctagtgatttgactcccctccatctaatttaccccccttaccacagaatccataagtcttctctctacatgtcc 42639251  T
Q  101 aaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||| |||||||| || ||||| ||||| ||||||||||||||||    
T  42639252 aaaccacctaagcctggtttccaccatcttttctactataggtg 42639295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 45423612 - 45423545
Alignment:
Q  162 ctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| |||||||||||||||||||||  | |||||||||||||||||||| ||||| |||||||||||    
T  45423612 ctctataatgttgtcatttctaattctatcccgtctagtcttaccacacaaccaacacaacatcctca 45423545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 49987487 - 49987354
Alignment:
Q  92 tacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggtt 191  Q
    |||||| ||||| |||||||| ||| |||| ||||| ||||||||||||||||| |||| ||   ||||||| ||||||||||||||||||||| |  |     
T  49987487 tacatgaccaaaccacctaagcctattttccaccatcttttctactataggtgtgaccc-ag---actctctatctaatgttgtcatttctaatcctatc 49987392  T
Q  192 ccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
      |||||||||||| | |||| |||| |||||||||||    
T  49987391 atgtctagtcttactaaacattcaacacaacatcctca 49987354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 53707864 - 53707720
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  ||| |    |||||||| ||||||| |||||||     
T  53707864 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacctc----cactctctttctaatggtgtcattc 53707769  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||| | |  |   |||||||||||| || ||||||||||||||||||||    
T  53707768 ctagtcctatcatgtctagtcttactactcatccaacgcaacatcctca 53707720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 56375360 - 56375216
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||  |||||||||  ||||||| ||||||||  |||||     ||||||||||||||| |||||||     
T  56375360 ggtcttctctctacatgcccaaaccatctaagcctgttttctaccaacttttctattataggtgctacccct----actctctctctaatggtgtcattc 56375265  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||    |   ||||||||||||||| ||||||||||||||||||||    
T  56375264 ctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctca 56375216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 1427417 - 1427555
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatat-----acagaatccacaggtcttctcactacatgccca 101  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |  | | ||||||||| |       ||| |||||||||||| |||| |||||||| ||    
T  1427417 agtttttatagatcttcccctacctctagtgatttgactcccccttgtatgatctactctccttaccacaaaatccacaggtcctctctctacatgctca 1427516  T
Q  102 aatcacctaagtctagtttctaccattttttctactata 140  Q
    || || ||||| |||||||| ||||| ||||||||||||    
T  1427517 aaccatctaagcctagtttccaccatgttttctactata 1427555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 23906508 - 23906657
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccc--agctcactctctctctaatgttgtcatt 179  Q
    |||||||| |||||||| |||| || ||||| ||| ||||||| |  ||||||||||||||||  |||||    ||| |||||||||||||| |||||||    
T  23906508 gtcttctctctacatgctcaaaccatctaagcctattttctacaaacttttctactataggtgctacccccactctctctctctctctaatggtgtcatt 23906607  T
Q  180 tctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     ||||| |  |   |||||||||| |||| ||||||||||||||||||||    
T  23906608 cctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctca 23906657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 47265415 - 47265558
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| |||||||||||||||| ||||  ||| ||||||| |  ||||||||||||||||| |||||    |||||||||| ||||| |||||||      
T  47265415 gtcttctctctacatgcccaaatcatctaaacctattttctactaccttttctactataggtgttacccc----cactctctctataatggtgtcattca 47265510  T
Q  182 taattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||    |   ||||||||||||||| |||||| |||||||||||||    
T  47265511 taatcttatcatgtctagtcttaccactcatccagcgcaacatcctca 47265558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 50471671 - 50471454
Alignment:
Q  11 tttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccacaggtcttctcactacatgcccaaatc 105  Q
    ||||||||| |||| | ||||||||| |||| ||||||||| || || |||||| |     ||| ||||| ||||||||||||| ||||||||||||| |    
T  50471671 tttctaggttttccaccacctctagtaatttaactcctctccatatggtctactctccttaatatagaattcacaggtcttctctctacatgcccaaacc 50471572  T
Q  106 acctaagtctagtttctaccattttttctactataggtgtcacccc-agctcactctctctctaatgttgtcatttctaattcggttccgtctagtctta 204  Q
    || |||  |||||||| ||||| |||||||||||  |||  ||||| ||       |||||||||||||||||| |||||| |  || |||| |||||||    
T  50471571 acttaaacctagtttccaccatcttttctactattagtgctaccccgag-------tctctctaatgttgtcatctctaatcctattacgtcaagtctta 50471479  T
Q  205 ccacacatccaacgcaacatcctca 229  Q
     || ||||||||| |||||| ||||    
T  50471478 gcaaacatccaacacaacattctca 50471454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 38570950 - 38571099
Alignment:
Q  72 gaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatg 171  Q
    ||||||||| |||||||  ||||||||||||| |||||||| |||||||| || || |||| |||||||||||   ||||||    ||||||||| ||||    
T  38570950 gaatccacatgtcttctttctacatgcccaaaccacctaagcctagtttccactatcttttgtactataggtgcttccccag----ctctctctcaaatg 38571045  T
Q  172 ttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcc 226  Q
    |||||||||| ||| |  |   |||||||  ||||||||||||||| ||||||||    
T  38571046 ttgtcatttccaatcctatcttgtctagt-gtaccacacatccaacacaacatcc 38571099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 48622755 - 48622897
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||| ||||  |||||      | |||||||||||| |||||||     
T  48622755 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctacccc------cactctctctaatggtgtcattc 48622848  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| ||||||| ||||||||||||    
T  48622849 ctaatcctatcatgtctagtcttaccactcatccaaagcaacatcctca 48622897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 49738741 - 49738891
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||||    | |||||||||||||||||| |||||||||||| |||| |      |||| |||| |  |||||||||  |||| || ||    
T  49738741 agtttttctaggtctt----tgcctctagtgatttgactcatctctatctgatttactctccttagtacaaaatctatgggtcttctctttacacgctca 49738836  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctc 156  Q
    ||||||||||| | |||||||||||| |||||||| |||||||  ||||||||||    
T  49738837 aatcacctaagccgagtttctaccatcttttctacaataggtgctaccccagctc 49738891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 37797920 - 37797783
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    ||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  ||| |    |||||||||||||||| ||||||||||    
T  37797920 tcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacctc----cactctctctctaatggtgtcatttct 37797825  T
Q  183 aattcggttccgtctagtcttaccacacatccaacgcaacat 224  Q
    |||    |   ||||||||||| ||| |||||||||||||||    
T  37797824 aatcttatcatgtctagtcttatcactcatccaacgcaacat 37797783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 229
Target Start/End: Original strand, 45205054 - 45205204
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaa--gtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgt 175  Q
    |||||||||||| |||| ||| |||| |||||||  ||||| |||||||||| ||||||||||||||    |||||     ||||||||  ||||| |||    
T  45205054 acaggtcttctctctacgtgcacaaaccacctaaaagtctattttctaccatcttttctactataggcactaccccca---actctctcgttaatggtgt 45205150  T
Q  176 catttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| ||||| |  | ||||||||||||||||| |||||||| |||||||||||    
T  45205151 cattcctaatcctatcccgtctagtcttaccactcatccaacacaacatcctca 45205204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 51550382 - 51550502
Alignment:
Q  8 gtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaa 102  Q
    ||||||| |||||| ||||||||| ||||||| ||||||| ||| |||||||| ||| |      || ||||||||||  ||||||| ||||||||||||    
T  51550382 gtttttccaggtctacccctacctttagtgatctgactcccctccatctgatcaactctccttgctagagaatccacatatcttctctctacatgcccaa 51550481  T
Q  103 atcacctaagtctagtttcta 123  Q
    | |||||||||||||| ||||    
T  51550482 accacctaagtctagtctcta 51550502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 1380450 - 1380335
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||| |||| |||||| ||||| |||| |||||||| |||||||| | |||||||| ||| ||||||||  ||||||| | ||||    |||||||||||    
T  1380450 tacaaaatctacaggttttctctctacgtgcccaaaccacctaagccgagtttctatcatgttttctacggtaggtgttatccca----actctctctct 1380355  T
Q  168 aatgttgtcatttctaattc 187  Q
    |||||||||  |||||||||    
T  1380354 aatgttgtccattctaattc 1380335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 28497572 - 28497458
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||| |||| ||| |||||||| ||||||||||||| |||||||| ||  |||| || || |||||||||| |||||  |||||| ||  ||||||||||    
T  28497572 tacataatctacaagtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttctactaaaggtgctaccccaact--ctctctctct 28497476  T
Q  168 aatgttgtcatttctaat 185  Q
     |||||||||||||||||    
T  28497475 gatgttgtcatttctaat 28497458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 221
Target Start/End: Complemental strand, 38266197 - 38266076
Alignment:
Q  100 caaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctag 199  Q
    |||| ||||||||  ||||||| |||||  | |||| ||||||||  |||| | ||| ||||||||||||||||||| |||||||||   | ||||||||    
T  38266197 caaaccacctaagcttagtttccaccatcctctctattataggtgctaccctaactctctctctctctaatgttgtcttttctaattttatcccgtctag 38266098  T
Q  200 tcttaccacacatccaacgcaa 221  Q
      | ||||||||||||||||||    
T  38266097 aatgaccacacatccaacgcaa 38266076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 40018344 - 40018503
Alignment:
Q  29 cctctagtgatttgactcctctctatctgatctactatatacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccatt 128  Q
    ||||||||||||||||| | ||  |||||||||||||  || |||||  ||| |||||||| |  |||||||||| ||| |||| | ||||||||||||     
T  40018344 cctctagtgatttgactacccttcatctgatctactac-tatagaatatacaagtcttctctcggcatgcccaaaccacataagccaagtttctaccatc 40018442  T
Q  129 ttttctactataggtgtcacccca----gctcactctctctctaatgttgtcatttctaatt 186  Q
    |||| ||| |||||||  ||||||     ||| |||||||||||||||||| ||||||||||    
T  40018443 ttttttacgataggtgctaccccaattctctctctctctctctaatgttgt-atttctaatt 40018503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 6478910 - 6478982
Alignment:
Q  111 agtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattc 187  Q
    |||||||||| |||||| |||||||||||||||| |||||||    |||||| |||||||||  |||||||||||||    
T  6478910 agtctagtttttaccatcttttctactataggtgccacccca----actctcactctaatgtcatcatttctaattc 6478982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 20105756 - 20105823
Alignment:
Q  158 ctctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    |||| |||||||||||||||||||||||    |  ||||||||||||||||||||||| |||||||||    
T  20105756 ctctttctctaatgttgtcatttctaatcatatctcgtctagtcttaccacacatccatcgcaacatc 20105823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 25967552 - 25967623
Alignment:
Q  158 ctctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||| |||||||||||| |      |||||||||||||||||||||| |||||||||||||    
T  25967552 ctctctctctaatgtagtcatttctaatcctaccatgtctagtcttaccacacatccatcgcaacatcctca 25967623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 50662468 - 50662393
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatc-acctaagtctagtttctaccattttttctactataggtgt 145  Q
    |||||| ||| |||||||| ||||||||||||| | ||||||| ||| |||| ||||| |||||||||||||||||    
T  50662468 agaatctacaagtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtgt 50662393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 42619027 - 42618922
Alignment:
Q  5 acagtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat--atacagaatccacaggtcttctcactacatgcccaa 102  Q
    ||||||||||||||| ||||  |  | |||||||||||||| |||| ||||||||||||| |   |||| |||| ||| |||||||| ||||||| ||||    
T  42619027 acagtttttctaggttttcctttgaccctagtgatttgactactctgtatctgatctactctcactacaaaatctacaagtcttctctctacatggccaa 42618928  T
Q  103 atcacc 108  Q
    ||||||    
T  42618927 atcacc 42618922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 43070053 - 43070115
Alignment:
Q  162 ctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacat 224  Q
    |||||||||||||||||||||||| |  | | ||||| |||||||||||||||||| ||||||    
T  43070053 ctctctaatgttgtcatttctaatcctatcctgtctaatcttaccacacatccaacccaacat 43070115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 50287032 - 50286970
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggt 143  Q
    ||||||||| ||||||||||||| || | ||||||| |||||||||  |||||||||||||||    
T  50287032 ggtcttctctctacatgcccaaaccatccaagtctattttctaccaacttttctactataggt 50286970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 1777302 - 1777371
Alignment:
Q  160 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||| ||||||| ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  1777302 ctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 1777371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 11389873 - 11389816
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||| ||||||| |||||||||||||||||||| || || |||| |||||||    
T  11389873 agtttttctacgtcttcctctacctctagtgatttgactactttccatcttatctact 11389816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 30807658 - 30807601
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactata 140  Q
    ||||||| |||  ||| |||||||||||||| ||||||||||||| ||||||||||||    
T  30807658 tcttctctctatgtgctcaaatcacctaagtttagtttctaccatcttttctactata 30807601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 36557246 - 36557343
Alignment:
Q  85 ttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaa 184  Q
    ||||| |||||| |||||| ||| ||||||||||||||||||| ||||||||||| ||||   |||||    |||||||||| ||| | |||||||||||    
T  36557246 ttctctctacattcccaaaccac-taagtctagtttctaccatcttttctactatgggtgctgcccca----actctctctccaatatcgtcatttctaa 36557340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 44860845 - 44860780
Alignment:
Q  164 ctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||| | ||||||||||    |||| ||||||||||||||||||||||| |||||||||||    
T  44860845 ctctaatgtagccatttctaatcttattccatctagtcttaccacacatccaacacaacatcctca 44860780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 45185304 - 45185361
Alignment:
Q  160 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaac 217  Q
    ||||||||||||||||||||||||||||  |  | ||||||||||| |||||||||||    
T  45185304 ctctctctaatgttgtcatttctaattctatctcatctagtcttactacacatccaac 45185361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 30621418 - 30621498
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctct 163  Q
    ||||||| |||| ||||||||||||||||  ||| |||| ||||| |||||||||||| |||  |||||| ||| ||||||    
T  30621418 tcttctctctacgtgcccaaatcacctaaacctattttccaccatcttttctactataagtgctaccccaactccctctct 30621498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 53518456 - 53518563
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||| ||||| ||||||||  |||||||||||   || |||||||||||| |      ||||| |||||||||||||||| |||||| ||||    
T  53518456 agtttttctaggccttcctctacctcttctgatttgactc---tccatctgatctactcttcgtactacagcatccacaggtcttctctctacataccca 53518552  T
Q  102 aatcacctaag 112  Q
    || ||||||||    
T  53518553 aaccacctaag 53518563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 4440923 - 4440860
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| ||| ||||||||| || ||||| ||| |||||||||  ||||||||||||||||    
T  4440923 ggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 4440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 35690326 - 35690230
Alignment:
Q  129 ttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctc 228  Q
    ||||||||||||||||  ||||||    ||||||||| ||| | ||||||| ||||| |  |  ||||||||||||| || |||||||||||||||||||    
T  35690326 ttttctactataggtgctacccca----actctctctttaaaggtgtcattcctaatcctatctcgtctagtcttactactcatccaacgcaacatcctc 35690231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 18966541 - 18966483
Alignment:
Q  167 taatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    |||||||||||||| |||| |  ||  ||||| ||||||||||||||||||||||||||    
T  18966541 taatgttgtcatttataatcctattttgtctaatcttaccacacatccaacgcaacatc 18966483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 28236252 - 28236190
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||| ||||||||||||| || ||||| ||| |||| ||||  ||||||||||||||||    
T  28236252 gtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtg 28236190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 34233290 - 34233385
Alignment:
Q  128 tttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    |||||||||||||||||  | |||| |||  ||| |||||||||||||| |||||||| |  |  | |||||||||| |||||||||||| |||||||    
T  34233290 tttttctactataggtgctatcccaactc--tctatctctaatgttgtcgtttctaatcctatcacatctagtcttatcacacatccaacacaacatc 34233385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 47147522 - 47147465
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||||| || |||||||||||  |||| ||||| ||||||| ||||    
T  47147522 agtttttctaggtcttcctctgcctctagtgatccgactactctccatctgatttact 47147465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 47611798 - 47611741
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctact 137  Q
    |||||||||| ||||||||||||| |||||||| ||| |||| | ||| |||||||||    
T  47611798 aggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctact 47611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 49739115 - 49739147
Alignment:
Q  194 gtctagtcttaccacacatccaacgcaacatcc 226  Q
    |||||||||||||||||||| ||||||||||||    
T  49739115 gtctagtcttaccacacatctaacgcaacatcc 49739147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 21952506 - 21952277
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatcta-----ctatatacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||     ||   || |||||||||||| |||||| ||||||| |||    
T  21952506 agtttttctaggtcttcccctacctctagtgatttgactcccctccatctgatctattctccttactatagaatccacaggacttctctctacatgtcca 21952407  T
Q  102 aatcacctaagtctagtttctaccattttttctactatag----gtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtct 197  Q
    || ||||| |||||||||||| |||| |||||||||||||    |||| ||||||   | |||||||| ||||| |||||||||||||    |  |||||    
T  21952406 aaccacctgagtctagtttctgccatcttttctactataggtgtgtgttacccca--accctctctctttaatgctgtcatttctaatcttatctcgtct 21952309  T
Q  198 agtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||| ||||||||||||||||    
T  21952308 agtcttaccacacatgcaacgcaacatcctca 21952277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 10082878 - 10083094
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-tacagaatccacaggtcttctcactacatgcccaaatc 105  Q
    |||||||||||||||| ||||| |||| ||||||||||||| ||| ||||  ||| || || ||||||||||||| |||||||| ||||||||| ||| |    
T  10082878 agtttttctaggtcttaccctatctctggtgatttgactcccctc-atctactct-ctttactacagaatccacaagtcttctctctacatgccgaaacc 10082975  T
Q  106 acctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttac 205  Q
    || ||||||||||||||||||| ||||||||||||||||  ||||||    |  ||||| |||||||| |||||||||||||  | ||||||||||||||    
T  10082976 acttaagtctagtttctaccatcttttctactataggtgatacccca----atgctctccctaatgttctcatttctaattctatcccgtctagtcttac 10083071  T
Q  206 cacacatccaacgcaacatcctca 229  Q
    ||||||| ||| ||||||||||||    
T  10083072 cacacat-caaagcaacatcctca 10083094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 11002554 - 11002777
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact-------atatacagaatccacaggtcttctcactacatgcc 99  Q
    ||||||||||||||| |||| |||||||||||| ||||||| ||  ||||||||||||       |  |||||| ||||||| ||||||  |||||||||    
T  11002554 agtttttctaggtctaccccaacctctagtgatctgactcccctacatctgatctactcccctaaaactacagagtccacagatcttctacctacatgcc 11002653  T
Q  100 caaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctag 199  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||  |||| |       ||||||||||||||||||||||||||||  | || ||| |    
T  11002654 caaaccacctaagtctagtttctaccatgttttctactgtaggtgctacccga------actctctctaatgttgtcatttctaattctatcccatctcg 11002747  T
Q  200 tcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||| |||||||||||||    
T  11002748 tcttaccacacatccagcgcaacatcctca 11002777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 2713093 - 2712897
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||||||  |||||||||||||||||  ||| |||||||||||| |     ||||||||||||||||||||||| |||||||||||    
T  2713093 agtttttctaggtcttcccctgactctagtgatttgactctcctccatctgatctactctccttcatacagaatccacaggtcttctctctacatgccca 2712994  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || |||||||||||||| |||||||| ||||  ||||||||||  ||||||         |||||| |||||||||||||||||||    ||||||||||    
T  2712993 aaccacctaagtctagtctctaccatcttttagactataggtgctacccca--------actctctgatgttgtcatttctaattctaccccgtctagtc 2712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 185
Target Start/End: Complemental strand, 14749456 - 14749277
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatat-----acagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| || ||| ||||||||||||||| ||| |||||||| ||| |       ||||||||||||||||||||| ||||||| |||    
T  14749456 agtttttctaggtcttcctctgcctttagtgatttgactcccctccatctgatcgactctccttacaacagaatccacaggtcttctctctacatgtcca 14749357  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaat 185  Q
    || || ||||||||||||||||||| |||||||||||||||||  || |||    ||||||||||||||||| |||||||||||    
T  14749356 aaccatctaagtctagtttctaccaatttttctactataggtgctacacca----actctctctctaatgttttcatttctaat 14749277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 216
Target Start/End: Original strand, 31636053 - 31636261
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||| |||||||||| |||||||||||||||||| | | |||| ||||||| |      ||||  |||||| ||||||||| |||||||||||    
T  31636053 agtttttctagatcttcccctatctctagtgatttgactccccaccatctaatctactctccttactacaacatccacgggtcttctctctacatgccca 31636152  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || ||||||||||||||||||||||| ||||||||||||||||  ||||||       || ||||||||| |||||||| ||||||  | | ||||||||    
T  31636153 aaccacctaagtctagtttctaccatcttttctactataggtgctacccca------actttctctaatgctgtcatttataattctatccagtctagtc 31636246  T
Q  202 ttaccacacatccaa 216  Q
    |||||||| ||||||    
T  31636247 ttaccacaaatccaa 31636261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 1525793 - 1525566
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||||||||||||||||| ||||||  ||| |||||||||||| |      | |||||| ||| ||||||||| ||||||| |||    
T  1525793 agtttttctaggtctacccctacctctagtgatctgactctcctccatctgatctactctcctaactgcagaattcacgggtcttctctctacatgtcca 1525694  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctc---actctctctctaatgttgtcatttctaattcggttccgtcta 198  Q
    |  ||||||||||||||||||||||| |||||||| |||||||  | ||||  ||   |||||||||||||||| |||||||||||||   ||   || |    
T  1525693 agccacctaagtctagtttctaccatcttttctacaataggtggtatcccaattcccaactctctctctaatgtcgtcatttctaatt---ttatctcga 1525597  T
Q  199 gtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||| ||| ||||||||||    
T  1525596 gtcttaccacacatccgacgtaacatcctca 1525566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 33667294 - 33667161
Alignment:
Q  73 aatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgt 172  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||       |||||  ||||||    
T  33667294 aatccacaggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctacccca------actctcgttaatgt 33667201  T
Q  173 tgtcatttctaattcggttccgtctagtcttaccacacat 212  Q
    |||||||||||||||  | | ||||| |||||||| ||||    
T  33667200 tgtcatttctaattctctactgtctactcttaccaaacat 33667161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 42199435 - 42199299
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||| | || || |||||||||||||| ||||| || ||||||||| |      ||||||||| ||| |||||||| |||||||||||    
T  42199435 agtttttctaggtctttctctccccctagtgatttgactactctccatgtgatctactctccttactacagaatctacatgtcttctctctacatgccca 42199336  T
Q  102 aatcacctaagtctagtttctaccattttttctacta 138  Q
    || ||||||||||||||||| ||||| ||||||||||    
T  42199335 aaccacctaagtctagtttccaccatcttttctacta 42199299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 2075686 - 2075830
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| | |||||||  ||||||||| ||||||| |||||    ||||||||||||||||||||||||     
T  2075686 ggtcttctctctacatgcccaaaccatctaagcctattgtctaccaacttttctactgtaggtgttacccc----cactctctctctaatgttgtcattc 2075781  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   |||||||||||| || ||||||||||||||||||||    
T  2075782 ctaatcctatcttgtctagtcttacaactcatccaacgcaacatcctca 2075830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 37065612 - 37065536
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||||||  ||||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  37065612 tacagaatccacatttcttctctctacatgcccaaatgacccaagtctagtttctaccatcttttctactataggtg 37065536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 229
Target Start/End: Complemental strand, 1275332 - 1275191
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  ||||     |||||||||||||||| ||||||| ||    
T  1275332 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctaccc-----cactctctctctaatggtgtcattcct 1275238  T
Q  183 aattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||| |      ||||||||||||||| ||||||||||||||||||||    
T  1275237 aatcctaccatgtctagtcttaccactcatccaacgcaacatcctca 1275191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 4496454 - 4496308
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||| | |||||||     
T  4496454 ggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctacccc----cactctctctctaaaggtgtcattc 4496359  T
Q  181 ctaattcggt--tccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |  |  ||||||||||||||| ||||||||||||||||||||    
T  4496358 ctaatcctatcctgtgtctagtcttaccactcatccaacgcaacatcctca 4496308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 14667816 - 14667683
Alignment:
Q  98 cccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccca--gctcactctctctctaatgttgtcatttctaattcggttccgt 195  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||||||  ||||||   ||| ||||||||||||| ||||||||||||||||     | |    
T  14667816 cccaaaccacctaagtctattttccaccatcttttctactataggtgctaccccaactctctctctctctctaatattgtcatttctaattctacctcat 14667717  T
Q  196 ctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||| |||||||||||| |||| ||||||    
T  14667716 ctagtcttatcacacatccaacacaacttcctca 14667683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 10639377 - 10639223
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactatag-------gtgtcaccccagctcactctctctctaat 170  Q
    |||||||||||| |||||||||||| ||| ||||| ||| |||||||||  |||||||||||||       |||  | |||    |||||||||||||||    
T  10639377 acaggtcttctctctacatgcccaattcatctaagcctattttctaccaacttttctactatagtctataggtgctagccc----cactctctctctaat 10639282  T
Q  171 gttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    | ||||||| ||||| |  ||| ||||||||||||||| ||||||||||||||||||||    
T  10639281 ggtgtcattcctaatcctattctgtctagtcttaccactcatccaacgcaacatcctca 10639223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 24178580 - 24178436
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| | ||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  24178580 ggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 24178485  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||| |  |   || |||||||||||| ||||||||||||||||||||    
T  24178484 ttaatcctatcatgtatagtcttaccactcatccaacgcaacatcctca 24178436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 1287792 - 1287945
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccc------agctcactctctctctaatgttgt 175  Q
    |||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||        ||| |||||||||||||| |||    
T  1287792 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctctctctctaatgatgt 1287891  T
Q  176 catttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  1287892 cattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 1287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 36123391 - 36123467
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgt 145  Q
    |||| |||| ||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  36123391 tacaaaatcaacacgtcttctctctacatgcccaaatcacctaagtcgagtttctacca-tttttctacaataggtgt 36123467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 5305613 - 5305545
Alignment:
Q  158 ctctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcc 226  Q
    |||||||||||||||||| |||||||||||  |   |||||||||||||||||||||||||||||||||    
T  5305613 ctctctctctaatgttgttatttctaattctatcttgtctagtcttaccacacatccaacgcaacatcc 5305545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 12492596 - 12492743
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctacta---taggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||   ||||||  |||||    |||||||||||||||| |||||    
T  12492596 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagtaggtgctacccc----cactctctctctaatggtgtca 12492691  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    || |||||    | | ||||||||||||||| ||||||||| ||||||||||    
T  12492692 ttcctaatcttatcctgtctagtcttaccactcatccaacgtaacatcctca 12492743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 18351111 - 18351183
Alignment:
Q  73 aatccacaggtcttctcactaca-tgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||| |||||||||||| ||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  18351111 aatctacaggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactataggtg 18351183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 16347590 - 16347734
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    | |||||||||||||| | ||||||    
T  16347590 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cgctctctctctaatggtttcattt 16347685  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     ||||    |   ||||||||||||||| ||||||||||||||||||||    
T  16347686 ttaatcatatattgtctagtcttaccactcatccaacgcaacatcctca 16347734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 38578654 - 38578784
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatcta-----ctatatacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||||||| ||||||||||||||||  ||| ||||||||||     |||  || | |||| ||| ||||||||  ||||||| ||    
T  38578654 agtttttctaggtctacccctacatctagtgatttgactctcctcgatctgatctaatctgctaactatataatctacatgtcttctctttacatgctca 38578753  T
Q  102 aatcacctaagtctagtttctaccatttttt 132  Q
    || ||||||||| ||||||||||||| ||||    
T  38578754 aaccacctaagtttagtttctaccatctttt 38578784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 32516553 - 32516488
Alignment:
Q  160 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||||||||||||||||||||||||| ||  | | |||||||||||||||||||||||| |||||||    
T  32516553 ctctctctaatgttgtcatttctaagtctatcctgtctagtcttaccacacatccaacacaacatc 32516488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 14665784 - 14665680
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||| ||  || |||||||||||||  |||||  ||| |||||||||||||| ||||||||    
T  14665784 ggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttctctactataggtgctacccccactctctctctctctaatggtgtcattt 14665685  T
Q  181 ctaat 185  Q
    |||||    
T  14665684 ctaat 14665680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 18698943 - 18698801
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatatacagaatccacaggtcttctcactacatgcccaaatca 106  Q
    ||||||||||||| |||| || ||||||||||||||||| ||||| ||||||| ||   | | |  |||| || |||||| || ||||| || |||||||    
T  18698943 agtttttctaggtattcctctgcctctagtgatttgactactctccatctgatatatactctccttaatctacgggtcttttctctacacgctcaaatca 18698844  T
Q  107 cctaagtctagtttctaccattttttctactataggtgtcaccc 150  Q
    |||||| |||||||| | ||| |||| |||||||||||| ||||    
T  18698843 cctaagcctagtttccatcatctttt-tactataggtgttaccc 18698801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 38685037 - 38684937
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  38685037 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 38684942  T
Q  181 ctaat 185  Q
    |||||    
T  38684941 ctaat 38684937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 9235062 - 9235000
Alignment:
Q  162 ctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacat 224  Q
    ||||||||||||||||||| |||| |  | ||||||||||||||||||||||||| |||||||    
T  9235062 ctctctaatgttgtcatttataatcctatcccgtctagtcttaccacacatccaatgcaacat 9235000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 21093768 - 21093702
Alignment:
Q  163 tctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||| ||||||||||||||||  |  | |||||||||||||||||| ||||||||||||||||    
T  21093768 tctctaatattgtcatttctaattccatcacatctagtcttaccacacatacaacgcaacatcctca 21093702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 6368220 - 6368281
Alignment:
Q  168 aatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||||  |  |||||| |||||||||||||| |||||||||||||||    
T  6368220 aatgttgtcatttctaattctatctcgtctattcttaccacacatctaacgcaacatcctca 6368281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 229
Target Start/End: Complemental strand, 34273099 - 34272948
Alignment:
Q  79 caggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccc------agctcactctctctctaatgt 172  Q
    ||||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||| ||||||||  |||||        ||| ||||||||||||||     
T  34273099 caggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctacccccactctctctctctctctctctaatgg 34273000  T
Q  173 tgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||| ||||     | | ||||||||||||||| ||||||| ||||||||||||    
T  34272999 tgtcattcctaa-----tcctgtctagtcttaccactcatccaatgcaacatcctca 34272948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 3301914 - 3301773
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  |||||||||||||| |  |||    |||||||||||||||||| || ||||     
T  3301914 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggggctacc----ctcactctctctctaatggtgacattc 3301819  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcc 226  Q
    ||||| |  |   ||||||||||||||| |||| | ||||||||||    
T  3301818 ctaatcctatcatgtctagtcttaccactcatcaagcgcaacatcc 3301773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 7678566 - 7678406
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtc-accccagctcactctctc-t 165  Q
    ||||||||| ||| ||||| || ||||| |||||||  ||||||| |  ||||| ||||||||| |||||||||||  | | |||| ||| ||||| | |    
T  7678566 tacagaatctacatgtcttttctctacaagcccaaacaacctaagcc--gtttccaccattttt-ctactataggttgctatcccaactctctctcccct 7678470  T
Q  166 ctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||| |  | |  ||||||||| ||||| |||||||||||||||||||    
T  7678469 ctaatgttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaacatcctca 7678406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 43558134 - 43558170
Alignment:
Q  193 cgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||||||||||||||||||||    
T  43558134 cgtctagtcttaccacacatccaacgcaacatcctca 43558170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 7359394 - 7359573
Alignment:
Q  8 gtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaa 102  Q
    |||||||||||  |||| || ||||||||||| |||||   ||| |||||||||||| |      ||||||||| |||  ||||||| ||||||||| ||    
T  7359394 gtttttctaggctttcctctgcctctagtgatatgactatcctccatctgatctactctccttactacagaatctacatatcttctctctacatgcc-aa 7359492  T
Q  103 atcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattc 187  Q
    | |||||||  ||| |||| ||||| ||||||||||||||||| |||  |    |||||||||||||  ||||||||||||||||    
T  7359493 accacctaaacctattttccaccatattttctactataggtgttacctga----actctctctctaacattgtcatttctaattc 7359573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 27998384 - 27998349
Alignment:
Q  194 gtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  27998384 gtctagtcttaccacacatccaacgcaacatcctca 27998349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 43475313 - 43475247
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||||| ||  || |||||| |||||||| |||||||| ||||| ||||||||||||||||    
T  43475313 acaggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactataggtg 43475247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 21193862 - 21193907
Alignment:
Q  91 ctacatgcccaaatcacctaagtctagtttctaccattttttctac 136  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||    
T  21193862 ctacatgcccaaatcacctaagtctagtttccaccatattctctac 21193907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 28676666 - 28676605
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactatag 141  Q
    |||||||||| ||||||||| ||| |||||||| ||| |||| ||||| |||||||||||||    
T  28676666 aggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatag 28676605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 33667584 - 33667547
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgac 44  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  33667584 agtttttctaggtcttcccctacatctagtgatttgac 33667547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 683977 - 684033
Alignment:
Q  158 ctctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatcc 214  Q
    ||||||||||||| ||||||||||||||||  |  | ||||||||||||||||||||    
T  683977 ctctctctctaatattgtcatttctaattctatctcatctagtcttaccacacatcc 684033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 227
Target Start/End: Original strand, 34194697 - 34194850
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||||||||||| ||| |||||  || ||||||||| |||||| | || ||||| ||||| |||| |  ||||||||| | |||| |||      |||||    
T  34194697 tacagaatccaccggtattctctttagatgcccaaaccacctaggcctggtttccaccatcttttatgttataggtgttatcccaactc------tctct 34194790  T
Q  168 aatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||||||  |||||||||| |  | | ||||||| |||||||||||||||| |||||||||    
T  34194791 aatgtttacatttctaatcctatcctgtctagttttaccacacatccaacacaacatcct 34194850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 41110028 - 41110092
Alignment:
Q  160 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacat 224  Q
    ||||||||| |||||||||||||||| |  |||| |||||||| || ||||||||| ||||||||    
T  41110028 ctctctctagtgttgtcatttctaatcctattccatctagtctcactacacatccagcgcaacat 41110092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 43558040 - 43558133
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||| ||| ||||||||| ||||||||  ||||||| ||||| ||||||| ||||| ||  |||| | |||  |||||||||||||||||||    
T  43558040 gtcttctctctatatgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctaccctaactc--tctctctctaatgttgtca 43558133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 79596 - 79521
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggt 143  Q
    ||||||||| | |||||||||| ||||||| ||||| ||||||| | |  |||| ||||| |||||||||||||||    
T  79596 tacagaatctataggtcttctctctacatgtccaaaccacctaattatgttttccaccatcttttctactataggt 79521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 28977071 - 28977134
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| |||||||| |||| || ||||| ||| |||||||||  ||||||||||||||||    
T  28977071 ggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtg 28977134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 3097218 - 3097172
Alignment:
Q  106 acctaagtctagtttctaccattttttctactataggtgtcacccca 152  Q
    |||||||||||||||||| ||| ||||||| ||||||||| ||||||    
T  3097218 acctaagtctagtttctagcatcttttctaatataggtgttacccca 3097172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 26884970 - 26885040
Alignment:
Q  154 ctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacat 224  Q
    |||||||||| ||||||| ||| ||| ||||| |  | ||||||||| ||||||| |||||||||||||||    
T  26884970 ctcactctctttctaatggtgttattcctaatcctatcccgtctagttttaccactcatccaacgcaacat 26885040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 12576993 - 12577050
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||||| || |||||||||||  |||| | ||| ||||||||||||    
T  12576993 agtttttctaggtcttcctctgcctctagtgataggactaccctccatctgatctact 12577050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 15370006 - 15370074
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccca 152  Q
    ||||||| |||||| | |||||||| ||||| ||||||||||||| |||| |||||| ||||| ||||||    
T  15370006 tcttctctctacat-ctcaaatcacttaagtatagtttctaccatcttttatactattggtgttacccca 15370074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 15588769 - 15588814
Alignment:
Q  98 cccaaatcacctaagtctagtttctaccattttttctactataggt 143  Q
    ||||||||||||||| |||||||| ||||| |||||| ||||||||    
T  15588769 cccaaatcacctaagcctagtttccaccatcttttcttctataggt 15588814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 42199542 - 42199485
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||| | || || |||||||||||||| ||||| || |||||||||    
T  42199542 agtttttctaggtctttctctccccctagtgatttgactactctccatgtgatctact 42199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 6859464 - 6859351
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    ||||||||||||| |||||||| |||| || ||||| |||||| | ||  |||| ||||| || |  ||||||||||  ||||||    ||||||| |||    
T  6859464 tacagaatccacaagtcttctctctacgtgtccaaaccacctatgcctgttttccaccatcttcttcactataggtgctacccca----actctctgtct 6859369  T
Q  168 aatgttgtcatttctaat 185  Q
    ||| ||||||||||||||    
T  6859368 aatattgtcatttctaat 6859351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 186
Target Start/End: Complemental strand, 27998430 - 27998402
Alignment:
Q  158 ctctctctctaatgttgtcatttctaatt 186  Q
    |||||||||||||||||||||||||||||    
T  27998430 ctctctctctaatgttgtcatttctaatt 27998402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 7e-39; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 43423866 - 43423645
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaa 103  Q
    |||||||||||||||| |||||||||||||||||||| || || ||||  |||||| ||     |||| |||| ||| |||||||| ||||||| |||||    
T  43423866 tttttctaggtcttcctctacctctagtgatttgactactatccatctagtctactctacttactacataatctacaagtcttctctctacatggccaaa 43423767  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtctt 203  Q
     |||||||| |||||||| ||||| ||||||||||||||||| ||||||    |||||||||||||||| |||||||||||| |  | | ||||||||||    
T  43423766 ccacctaagcctagtttccaccatcttttctactataggtgttacccca----actctctctctaatgtggtcatttctaatcctatcctgtctagtctt 43423671  T
Q  204 --accacacatccaacgcaacatcct 227  Q
       |||||||||||||||||||||||    
T  43423670 cccccacacatccaacgcaacatcct 43423645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 26016586 - 26016363
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| | | ||||||||||||| ||||||| ||  |||||||||| | |      |||||||| || |||||||||  |||||| ||||    
T  26016586 agtttttctaggtctactcttacctctagtgatctgactccccttcatctgatctaatctccttgctacagaatgcataggtcttctttctacataccca 26016487  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || ||||||| ||||||||||||||| ||||||  ||||||||| ||||||    |||||||||||||||   | |||| |||||   | | ||||||||    
T  26016486 aaccacctaaatctagtttctaccatcttttctcatataggtgttacccca----actctctctctaatgccattatttataattatatcctgtctagtc 26016391  T
Q  202 ttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||||||||||||    
T  26016390 ttaccacacatccaacgcaacatcctca 26016363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 1210815 - 1210671
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  1210815 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 1210720  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | | ||||||||||||||| ||||||||||||||||||||    
T  1210719 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 1210671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 229
Target Start/End: Complemental strand, 40419785 - 40419565
Alignment:
Q  10 ttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaat 104  Q
    ||||||| |||| |||||||||||||| || | ||||| ||| |||||| ||||| |      |||| |||||||| |||||||| |||||||||||||     
T  40419785 ttttctatgtctacccctacctctagttatctaactcccctccatctgaactactctccttgctacataatccacatgtcttctctctacatgcccaaac 40419686  T
Q  105 cacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtctta 204  Q
    ||| ||||||||||| ||||||| | |||||||||| ||   ||||||    |||||||||||||||||||||||||||||||  |  | |||||| |||    
T  40419685 cacttaagtctagttactaccatctattctactataagttctacccca----actctctctctaatgttgtcatttctaattctatctcatctagtttta 40419590  T
Q  205 ccacacatccaacgcaacatcctca 229  Q
    ||| |||| ||||||| ||||||||    
T  40419589 ccatacattcaacgcaccatcctca 40419565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 10272404 - 10272266
Alignment:
Q  10 ttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaat 104  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||| || |      ||| |||||||||||||||||| ||||||||| |||     
T  10272404 ttttctaggtcttcccctacctctagtgatttgactcccatccatctgatctcctctccttcctac-gaatccacaggtcttctctctacatgccaaaac 10272306  T
Q  105 cacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||| | ||||||||||||||||| |||||||||| |||||    
T  10272305 cactttagtctagtttctaccatcttttctactacaggtg 10272266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 9509467 - 9509244
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| ||||||||  | || ||||||  ||| |||||||||||| ||     || || ||  || ||||||||| |||||||||||    
T  9509467 agtttttctaggtcttcctctacctcttctaatatgactctcctccatctgatctactctaagtactaaagcatataccggtcttctctctacatgccca 9509368  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    ||  ||||||| ||| ||| |||||| ||||||||||||||||  ||||||    ||||||||||||||| |||||||||||||    | | ||||||||    
T  9509367 aactacctaagcctattttttaccatcttttctactataggtgctacccca----actctctctctaatggtgtcatttctaatcatatcctgtctagtc 9509272  T
Q  202 ttaccacacatccaacgcaacatcctca 229  Q
    ||| ||| |||||||| |||||||||||    
T  9509271 ttatcactcatccaacacaacatcctca 9509244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 38807883 - 38808030
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    |||||||||  |||||||| ||| || ||||||||| |||||||||  ||||||||||||||||  |||||   || |||||||||||||| ||||||||    
T  38807883 ggtcttctctttacatgcctaaaccatctaagtctattttctaccaacttttctactataggtgctacccccattctctctctctctaatggtgtcattt 38807982  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||  | |||||| ||||||||||  ||||||| |||||||||||    
T  38807983 ctaattctatcccgtctggtcttaccac-tatccaacacaacatcctca 38808030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 51440977 - 51441121
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||| |||||    |||||||||||||||| |||||||     
T  51440977 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttacccc----cactctctctctaatggtgtcattc 51441072  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| | ||||| ||||||||||||    
T  51441073 ctaatcctatcatgtctagtcttaccactcgtccaatgcaacatcctca 51441121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 167
Target Start/End: Complemental strand, 2544747 - 2544583
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| |||||||||||| |||||||   ||| |||||||||||| |      || |||||| | |||||||||| ||||||| |||    
T  2544747 agtttttctaggtcttcctctacctctagtg-tttgactatcctccatctgatctactctccttactatagaatctataggtcttctctctacatgtcca 2544649  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    || |||||||||||  |||| ||||| ||||||||||||||||  |||||| ||| ||||||||||    
T  2544648 aaccacctaagtctgttttccaccatcttttctactataggtgctaccccaactctctctctctct 2544583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 229
Target Start/End: Original strand, 9599620 - 9599750
Alignment:
Q  95 atgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccg 194  Q
    |||||| || |||||||| ||| |||||||||| ||||||||||||||||| || |||    ||||||||||||||| ||||||| |||||    | |||    
T  9599620 atgcccgaaccacctaagcctattttctaccatcttttctactataggtgttactcca----actctctctctaatgatgtcattcctaatcatatcccg 9599715  T
Q  195 tctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||| |||||||| |||||||||||    
T  9599716 tctagtcttaccactcatccaacacaacatcctca 9599750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 27637764 - 27637908
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctc--tatctgatctactata-----tacagaatccacaggtcttctcactacatgcc 99  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||  ||| ||||||||| |      ||||  ||||||| ||||| || |||||||||    
T  27637764 agtttttttaggtcttcccctacctctagtgatttgcctccactccatatatgatctactctccttactacaacatccacatgtcttttctctacatgcc 27637863  T
Q  100 caaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||| ||||||||||||||||||| ||| |||||| |||||||||    
T  27637864 caaaacacctaagtctagtttctatcatcttttctgctataggtg 27637908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 696339 - 696195
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||  || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  696339 ggtcttctctctacatgtccaagccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 696244  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | | ||||||||||||||| |||||| |||||||||||||    
T  696243 ctaatcctatcctgtctagtcttaccactcatccagcgcaacatcctca 696195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 9592804 - 9592660
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||  || ||||| ||| ||||||| |  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  9592804 ggtcttctctctacatgcccaacccatctaagcctattttctacaaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 9592709  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  9592708 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 9592660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 30202342 - 30202486
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||   |||||||||||||||  |||||    |||||||||||||||| |||||||     
T  30202342 ggtcttctctctacatgaccaaaccatctaagcctattttctaccaacctttctactataggtgctacccc----cactctctctctaatggtgtcattc 30202437  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  30202438 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 30202486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 34792561 - 34792705
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| | |||||     
T  34792561 ggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgctacccc----cactctctctctaatggtttcattc 34792656  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| |||||| |||||||||||||    
T  34792657 ctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctca 34792705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 32231167 - 32231310
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| ||||||||||||| || ||||| ||| ||||||||| |||||||||||||||||  |||||    |||||||||||||||| ||||||| |    
T  32231167 gtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctacccc----cactctctctctaatggtgtcattcc 32231262  T
Q  182 taattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| |  |   ||||| ||||||||| |||| | |||||||||||||    
T  32231263 taatcctatcatgtctaatcttaccactcatctagcgcaacatcctca 32231310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 22090166 - 22090020
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||  | | |||||||||||||| |||||||     
T  22090166 ggtcttctccctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc--cactctctctctctaatggtgtcattc 22090069  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||| |  | | ||||||||||||||| |||||||| || ||||||||    
T  22090068 ataatcctatcctgtctagtcttaccactcatccaacacagcatcctca 22090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 37263476 - 37263338
Alignment:
Q  11 tttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata--tacagaa---tccacaggtcttctcactacatgcccaaatc 105  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||||| |||| |   ||| | |   |||||| || ||||| ||||||||||||| |    
T  37263476 tttctaggtcttcccctacctctagtgatttgacacccctccatctgatttactctccttaccgcaacatccacaagttttctctctacatgcccaaacc 37263377  T
Q  106 acctaagtctagtttctaccattttttctactataggtg 144  Q
    ||  ||||||||||||||| || ||||||||||||||||    
T  37263376 actgaagtctagtttctactatcttttctactataggtg 37263338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 4001667 - 4001811
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||| ||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  4001667 ggtctcctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 4001762  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  ||  ||||||||||||||| |||| | |||||||||||||    
T  4001763 ctaatcctattttgtctagtcttaccactcatctagcgcaacatcctca 4001811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 15086004 - 15085860
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  15086004 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 15085909  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | |  |||||||||||||| | |||| |||||||||||||    
T  15085908 ctaatcctatcctatctagtcttaccactcgtccagcgcaacatcctca 15085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 28528504 - 28528385
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||| ||||||||||||||| ||||| ||||||||||| ||| || ||||||||| |      ||||||||||||| |||||||| | ||||||| |    
T  28528504 agtttttttaggtcttcccctacttctagggatttgactcccctccatttgatctactgtccttactacagaatccacaagtcttctcccgacatgccga 28528405  T
Q  102 aatcacctaagtctagtttc 121  Q
    || |||||||||||||||||    
T  28528404 aaccacctaagtctagtttc 28528385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 51812591 - 51812495
Alignment:
Q  85 ttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaa 184  Q
    ||||| ||||||||||||||||| |||| |||||||| ||||| ||||||||||||| ||| ||||||    ||||||||||||| || |||||||||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatagttgttacccca----actctctctctaaagtagtcatttctaa 51812496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 18793201 - 18793340
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| || |||||| |||||| |||||||||||||||||||| |||||||| ||| ||   ||||||    || |||||| |||||| |||||||     
T  18793201 gtcttctctctgcatgccaaaatcaactaagtctagtttctaccatcttttctacaataagtcctacccca----accctctctttaatgtcgtcatttt 18793296  T
Q  182 taattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    || |||  | | |||||||||| |||||||||||||||||||||    
T  18793297 tagttctatcctgtctagtctttccacacatccaacgcaacatc 18793340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 8671986 - 8671848
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||      | |||||||||||| ||||||| ||    
T  8671986 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc------cactctctctaatggtgtcattcct 8671893  T
Q  183 aattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||| |  |   ||||||||||||||| ||||||||||||||||||    
T  8671892 aatcctatcatgtctagtcttaccactcatccaacgcaacatcct 8671848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 39422179 - 39422355
Alignment:
Q  10 ttttctaggtcttcccctacctctagtgatttgactcctctctatctgatcta-----ctatatacagaatccacaggtcttctcactacatgcccaaat 104  Q
    |||||||| |||  |||||||||| ||||||||||||| ||| || |||||||     |||  |||| |||| ||| |||||||| ||||||| ||||      
T  39422179 ttttctagatctagccctacctctggtgatttgactcccctccatatgatctattctcctaactacataatctacatgtcttctctctacatgtccaag- 39422277  T
Q  105 cacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattc 187  Q
    |||||||||||||||||||| || |||||||||||| |||| || |||    ||||||| |||||| ||||||||||||||||    
T  39422278 cacctaagtctagtttctactatcttttctactatatgtgttactcca----actctct-tctaatattgtcatttctaattc 39422355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 50771689 - 50771746
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  50771689 agtttttctaggtcttcccctacctctagtcatttgactcccctccatctgatctact 50771746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 8343062 - 8343141
Alignment:
Q  73 aatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccca 152  Q
    ||||||||||||||||| |||||||||||   |||||||| |||||||| ||||| |||||||||| |||||| ||||||    
T  8343062 aatccacaggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttctactaaaggtgttacccca 8343141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 32082957 - 32083101
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||| ||| || |||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  32082957 ggtctcctctctgcatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 32083052  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |    | ||||||||||||||| |||||| |||||||||||||    
T  32083053 ctaatcctaccctgtctagtcttaccactcatccagcgcaacatcctca 32083101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 49347605 - 49347749
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| || |||| ||||| || ||||| ||| |||||||||  ||||||||||||| ||  |||||     |||||||||| |||| |||||||     
T  49347605 ggtcttctctctgcatgaccaaaccatctaagcctattttctaccaacttttctactatagatgctacccct----actctctctccaatggtgtcattc 49347700  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | | ||||||||||||||| ||||||||||||||||||||    
T  49347701 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 49347749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 29807949 - 29807891
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctacca 126  Q
    |||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  29807949 tacataatccacatgtcttctctctacatgcccaaatcacgtaagtctagtttctacca 29807891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 48431605 - 48431712
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||| |||| ||| |||||||| ||||||||||||| |||||||| ||| |||| ||||| |||||||||||||| |  ||||||| |   |||||||||    
T  48431605 tacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctaccccagtt--ttctctctct 48431702  T
Q  168 aatgttgtca 177  Q
    ||||||||||    
T  48431703 aatgttgtca 48431712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 52442666 - 52442784
Alignment:
Q  12 ttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccacaggtcttctcactacatgcccaaatca 106  Q
    ||||||||||||| |||||||||| |||||||||||  || |||||||||||| |      ||||||| ||||| || |||||   |||||||||| |||    
T  52442666 ttctaggtcttcctctacctctagagatttgactcccttccatctgatctactctctgcactacagaacccacatgttttctcttcacatgcccaactca 52442765  T
Q  107 cctaagtctagtttctacc 125  Q
    |||||||||||||||||||    
T  52442766 cctaagtctagtttctacc 52442784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 43240591 - 43240737
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||| ||||  | ||||| ||| |||||| || |||||||||||||||||  |||||  |||  |||||||||||||  ||||||     
T  43240591 ggtcttctctctacatgctcaaactatctaagcctattttctatcaatttttctactataggtgctacccccactc--tctctctctaatggcgtcattc 43240688  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  43240689 ataatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 43240737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 49377473 - 49377417
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctac 63  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||    
T  49377473 agtttttctaggtcttcctctgcctctagtgatttgactactctccatctgatctac 49377417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 51602126 - 51601984
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||    ||||  |||||||||||| |||||||     
T  51602126 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacc----ctca--ctctctctaatggtgtcattc 51602033  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||    |   ||||||||||||||| |||| |||||||||||||||    
T  51602032 ctaatcatatcatgtctagtcttaccactcatctaacgcaacatcctca 51601984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 224
Target Start/End: Original strand, 27848004 - 27848155
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    ||||| ||| |||||||||||| || |||||||||| ||||||||  || |||||||||| |||||||| | |||||  ||| ||    |||||||||||    
T  27848004 tacagcatctacaggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgctaccaca----actctctctct 27848099  T
Q  168 aatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacat 224  Q
    |||| ||| ||| || || |  | ||||||||||||||||| |||||||| ||||||    
T  27848100 aatggtgttattcct-atcctatcccgtctagtcttaccactcatccaacacaacat 27848155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 40416454 - 40416355
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||| |||| |||| ||||||| ||||||||| ||| |||||||| || ||||| ||||| ||||||||||||||||  || ||| ||| ||||||||||    
T  40416454 tacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctactccaactctctctctctct 40416355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 3818989 - 3819131
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatat-----acagaatccacaggtcttctcactacatgccca 101  Q
    |||||||| ||||||||| ||  |||||||| ||||| | | ||| |||||||||||| | |     | |||||||||| |||||||  |||||||||||    
T  3818989 agtttttcaaggtcttcctctttctctagtggtttgattaccctccatctgatctactctctttactagagaatccacaagtcttctttctacatgccca 3819088  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    || ||| ||||||||||| | ||||| |||||||| |||||||    
T  3819089 aaccacttaagtctagttaccaccatcttttctaccataggtg 3819131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 17815537 - 17815402
Alignment:
Q  86 tctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaat 185  Q
    |||| ||||||||||||| || ||||| |||||||| ||||| ||||| | |||| ||     || | |||| |||||||||||| ||||||||||||||    
T  17815537 tctctctacatgcccaaaccaactaagcctagtttccaccatcttttccattataagt-----cctacctca-tctctctctaatattgtcatttctaat 17815444  T
Q  186 tcggttccgtctagtcttaccacacatccaacgcaacatcctc 228  Q
     |  | |||||||||| ||||||||||||||| ||||||||||    
T  17815443 gctatcccgtctagtc-taccacacatccaacacaacatcctc 17815402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 51584893 - 51584855
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgact 45  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51584893 agtttttctaggtcttcccctacctctagtgatttgact 51584855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 12261846 - 12261971
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctac-----tatatacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||| ||| |||||||||||||||||||  ||| ||| |||||||     |   |||| |||||| | |||||| | | |||||||||    
T  12261846 agtttttctaggtcttaccccacctctagtgatttgactctcctccatcagatctaccctcattactacaaaatccaaaagtcttccctccacatgccca 12261945  T
Q  102 aatcacctaagtctagtttctaccat 127  Q
    || |||||||||||||||| ||||||    
T  12261946 aaccacctaagtctagtttataccat 12261971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 4380049 - 4379931
Alignment:
Q  115 tagtttctaccattttttctactataggtgtcaccccagc--tcactctctctct--aatgttgtcatttctaattcggttccgtctagtcttaccacac 210  Q
    ||||||| ||||| ||||||||||||| ||  |||||| |  |||||||||||||  ||||||||||||||||||    |    ||||||||||||||||    
T  4380049 tagtttccaccatcttttctactatagttgctaccccaacactcactctctctctctaatgttgtcatttctaatcatatcttttctagtcttaccacac 4379950  T
Q  211 atccaacgcaacatcctca 229  Q
    ||||||| |||||||||||    
T  4379949 atccaacacaacatcctca 4379931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 32404728 - 32404807
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccc 150  Q
    |||||| |||||||||||| ||||||  ||||| |||||||| ||| |||| ||||| |||| |||||||||||| ||||    
T  32404728 agaatctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtgttaccc 32404807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 5338797 - 5338731
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||||| || |||||||||| ||||||||   |||||| ||||| ||||||||||||||||    
T  5338797 acaggtcttctctctgcatgcccaaaccacctaagctcagtttccaccatcttttctactataggtg 5338731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 6025754 - 6025612
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| || ||||||||||||||||| | ||  |||||||||||| |      |  || ||||| |||| |||||  ||||||||||    
T  6025754 agtttttctaggtcttcctctgcctctagtgatttgactaccctacatctgatctactctccttattggagtatccataggtgttctctgtacatgccca 6025655  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    | ||| ||||| |||||||| |||||  ||| |||||||||||    
T  6025654 agtcatctaagcctagtttcaaccatcgtttttactataggtg 6025612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 13827926 - 13827992
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||||| |||||||  |||| |||||||  |||||||| ||||| ||||||||||||||||    
T  13827926 acaggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtg 13827992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 43898378 - 43898321
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||| ||||||| |||||||| | ||||||||||||| ||| ||||||||||||    
T  43898378 agtttttccaggtctttccctacctttggtgatttgactcccctccatctgatctact 43898321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 52073185 - 52073241
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| ||||||| ||||    
T  52073185 agtttttctaggtcttcctctgcctctagtgatttgactactctc-atctgatttact 52073241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 10569266 - 10569310
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaag 112  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||    
T  10569266 tacagaatctacaggtcttctctctacatgcccaaaccacctaag 10569310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 52442788 - 52442860
Alignment:
Q  157 actctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||| |||||| |||||||||||    |   |||||||||||||||||||||||| |||||||||||    
T  52442788 actctctctccaatgttctcatttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctca 52442860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 1661510 - 1661419
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctc 162  Q
    |||||| | |||||||||| |||||||| |||| || || || ||| |||| ||||| ||||||||||||||||  |||||| ||| |||||    
T  1661510 agaatctataggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctaccccaactctctctc 1661419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 19908238 - 19908350
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||| |||| |||||| ||||| |||||||||||||||||||||   | |||||  |||| |||| |||||||||||  ||| ||    ||||||||| |    
T  19908238 tacataatctacaggttttctctctacatgcccaaatcacctaaacttggtttcccccatcttttttactataggtgctaccaca----actctctcttt 19908333  T
Q  168 aatgttgtcatttctaa 184  Q
    ||| |||||||||||||    
T  19908334 aattttgtcatttctaa 19908350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 39140590 - 39140527
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| ||||||||||||| |||||||| | | ||| | |||| ||||||||||||||||    
T  39140590 ggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtg 39140527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 40920822 - 40920889
Alignment:
Q  158 ctctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||||||||||||| |||| ||||||||| |  |  |||||| ||||||||||||||||| ||||||||    
T  40920822 ctctctctctaatattgtaatttctaatcctatctcgtctaatcttaccacacatccaatgcaacatc 40920889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 50806817 - 50806762
Alignment:
Q  8 gtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctac 63  Q
    ||||||||||||||||  |||| ||||||||||||||||| ||| || ||||||||    
T  50806817 gtttttctaggtcttcatctacttctagtgatttgactcccctccatttgatctac 50806762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 6641112 - 6641062
Alignment:
Q  175 tcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    |||||||||||||  | || ||||||| |||||||||||||||||||||||    
T  6641112 tcatttctaattctatgccatctagtcataccacacatccaacgcaacatc 6641062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 16822231 - 16822289
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctac 136  Q
    |||||||||||| ||||||| ||||| |||||||| | |||||||||||| || |||||    
T  16822231 acaggtcttctctctacatgtccaaaccacctaagccgagtttctaccatcttgtctac 16822289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 16943243 - 16943113
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| ||||| ||||||| ||| ||| ||||||||| ||||| |||||||||||||||   ||||||    |||||||| ||||| |||| || ||    
T  16943243 gtcttctccctacacgcccaaaccac-taaatctagtttccaccatcttttctactataggtactacccca----actctctccctaatattgtaatgtc 16943149  T
Q  182 taattcggttccgtctagtcttaccacacatccaac 217  Q
    |||||   |  |||||||||||| ||| ||||||||    
T  16943148 taattttatctcgtctagtcttatcacgcatccaac 16943113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 9599527 - 9599584
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||||| ||||||||  |||| ||||||  ||| ||||||||||||    
T  9599527 agtttttctaggtcttcctctacctcttatgatctgactctcctccatctgatctact 9599584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 16273142 - 16273171
Alignment:
Q  195 tctagtcttaccacacatccaacgcaacat 224  Q
    ||||||||||||||||||||||||||||||    
T  16273142 tctagtcttaccacacatccaacgcaacat 16273171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 42501257 - 42501200
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||||||||||| |||| ||||||||| |||||||||| | ||| |||||| |||||    
T  42501257 agtttttctaggttttcctctacctctaatgatttgactaccctccatctgaactact 42501200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 52073800 - 52073829
Alignment:
Q  200 tcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||||||||||||||    
T  52073800 tcttaccacacatccaacgcaacatcctca 52073829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 7921906 - 7921834
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcacccca 152  Q
    |||| ||||| ||||||| ||||| ||| |||  |||||||| ||||| ||||||||||||||| | ||||||    
T  7921906 aggtattctctctacatgtccaaaccacataaacctagtttccaccatcttttctactataggttttacccca 7921834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 19969645 - 19969693
Alignment:
Q  157 actctctctctaatgttgtcatttctaattcggttccgtctagtcttac 205  Q
    ||||| |||||||||||||||||||||||||  |  |||||||||||||    
T  19969645 actctttctctaatgttgtcatttctaattctatcacgtctagtcttac 19969693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 29577275 - 29577307
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgat 39  Q
    |||||||||||||||||| ||||||||||||||    
T  29577275 agtttttctaggtcttcctctacctctagtgat 29577307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 33560989 - 33561029
Alignment:
Q  5 acagtttttctaggtcttcccctacctctagtgatttgact 45  Q
    |||||||||||||| ||||| || |||||||||||||||||    
T  33560989 acagtttttctaggacttcctctgcctctagtgatttgact 33561029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 33561075 - 33561140
Alignment:
Q  159 tctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcc 226  Q
    ||||||||||||||||||||||| ||| |  | || | |||||||||  |||||||||||||||||||    
T  33561075 tctctctctaatgttgtcatttccaatcctatcccatttagtcttac--cacatccaacgcaacatcc 33561140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 34827422 - 34827458
Alignment:
Q  193 cgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||| |||||||| |||||||||||    
T  34827422 cgtctagtcttaccactcatccaacacaacatcctca 34827458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 36339936 - 36339968
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgat 39  Q
    |||||||||||||||||| ||||||||||||||    
T  36339936 agtttttctaggtcttcctctacctctagtgat 36339968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 44008726 - 44008690
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgact 45  Q
    |||||||||||||||| || |||||||||||||||||    
T  44008726 tttttctaggtcttcctctgcctctagtgatttgact 44008690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 229
Target Start/End: Complemental strand, 33084133 - 33083984
Alignment:
Q  76 ccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgt 175  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||||||| |||||||  ||||||    |||||||||||||| | ||    
T  33084133 ccacaggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctacccca----actctctctctaatatcgt 33084038  T
Q  176 catttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||  | || |||||||||||||||||||||||||| ||||||||    
T  33084037 catttctaattctatcccatctagtcttaccacacatccaacgcagcatcctca 33083984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 229
Target Start/End: Original strand, 9593843 - 9594068
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaa 103  Q
    |||||||||||||||| ||||||||  |||||||||||  ||| |||||||||||| |      ||||| ||| ||| |||||||| |||||||||||||    
T  9593843 tttttctaggtcttcctctacctct--tgatttgactctcctccatctgatctactcttcttactacagcatctacatgtcttctctctacatgcccaaa 9593940  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtgtcaccccagct--cactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
     |||||||| ||| |||||||||| ||||||||||  ||||  |||||| ||  | |||||||||||||| ||||||| ||||| |  | ||||||||||    
T  9593941 ccacctaagcctattttctaccatcttttctactaatggtgctaccccaactccctctctctctctaatggtgtcattcctaatcctatcccgtctagtc 9594040  T
Q  202 ttaccacacatccaacgcaacatcctca 229  Q
    ||||||| ||||||||||||||||||||    
T  9594041 ttaccactcatccaacgcaacatcctca 9594068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 10617367 - 10617574
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgat---ctactatatacagaatccacaggtcttctcactacatgcccaaa 103  Q
    ||||||||||||| |||  |||||||||||||||||||||| ||| || ||||   || ||  || ||||| |||||||||||||  |||||||| ||||    
T  10617367 agtttttctaggttttcttctacctctagtgatttgactcccctccatttgatactctccttaatgcagaaaccacaggtcttctttctacatgctcaaa 10617466  T
Q  104 tcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtctt 203  Q
     ||||||||||||||||||| | | |||||||||||| |||  ||||||    |||||| |||     ||||||||||||||||  || |||||||||||    
T  10617467 ccacctaagtctagtttcta-cgtcttttctactataagtgctacccca----actctcgctc-----ttgtcatttctaattctatttcgtctagtctt 10617556  T
Q  204 accacacatccaacgcaa 221  Q
    | ||||||||||||||||    
T  10617557 aacacacatccaacgcaa 10617574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 5631892 - 5631744
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || |||||  || |||||||||  ||||||||||||||||| |||||  ||| |||||||||||||| |||||||     
T  5631892 ggtcttctctctacatgtccaaaccatctaagcatattttctaccaacttttctactataggtgttacccccactctctctctctctaatggtgtcattc 5631793  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||    | | ||||||||||||||| |||||||| |||||||||||    
T  5631792 ctaatcatatccggtctagtcttaccactcatccaacacaacatcctca 5631744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 28085446 - 28085302
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  28085446 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 28085351  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  28085350 gtaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 28085302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 30031326 - 30031182
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| |||| ||| ||||| ||| |||||||||  ||||||||||||||||  |||||    ||||| |||||||||| || |||||    
T  30031326 ggtcttctctctacatgtccaactcatctaagcctattttctaccaacttttctactataggtgctacccc----cactccctctctaatggtgacattt 30031231  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | ||||||||||||||||| |||||||| ||||| |||||    
T  30031230 ctaatcctatcccgtctagtcttaccactcatccaacacaacaacctca 30031182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 228
Target Start/End: Original strand, 6641635 - 6641764
Alignment:
Q  95 atgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccg 194  Q
    |||||||||  ||| |||||||||||||||||| ||||||||||||||||  ||||||    ||||| |||||||| |||||||||| |||    | ||     
T  6641635 atgcccaaacaacccaagtctagtttctaccatcttttctactataggtgatacccca----actctatctctaatattgtcatttccaatcttatccca 6641730  T
Q  195 tctagtcttaccacacatccaacgcaacatcctc 228  Q
    ||||||||||| | ||||| ||||||||||||||    
T  6641731 tctagtcttacaaaacatcgaacgcaacatcctc 6641764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 5258351 - 5258506
Alignment:
Q  72 gaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatg 171  Q
    ||||| || ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||  | | |||||||||||| |    
T  5258351 gaatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc--cactctctctctctaacg 5258448  T
Q  172 ttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||||||  |||| |  |   ||||||||||||||| ||||||||||||||| ||||    
T  5258449 gtgtcattcataatcctatcttgtctagtcttaccactcatccaacgcaacattctca 5258506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 21352046 - 21352112
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||||| ||||||| |||||||| ||||| ||| ||||||||| |||||||||||||||||    
T  21352046 acaggtcttctctctacatgtccaaatcatctaagcctattttctaccaatttttctactataggtg 21352112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 24665888 - 24665818
Alignment:
Q  73 aatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggt 143  Q
    |||| |||||||||||| ||||||| ||||| |||||||| ||| |||||||||| |||||||||||||||    
T  24665888 aatctacaggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 32755991 - 32755845
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||| | ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||  | | |||||||||||||| |||||||     
T  32755991 ggtcttccctctacatgaccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc--cactctctctctctaatggtgtcattc 32755894  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||    |   ||||||||||||||| |||||||| |||||||||||    
T  32755893 ctaatattatcatgtctagtcttaccactcatccaacacaacatcctca 32755845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 33998288 - 33998356
Alignment:
Q  157 actctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    |||||||||||||||| |||||||||||| |  |  | |||||||||||||||||||||||||||||||    
T  33998288 actctctctctaatgtagtcatttctaatcctatcacatctagtcttaccacacatccaacgcaacatc 33998356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 608230 - 608085
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||||||| ||||||| ||||| || ||||| ||| |||||| ||  ||||||||||||||||  |||    ||||  |||||||||||| |||||    
T  608230 acaggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttttctactataggtgatacc----ctca--ctctctctaatggtgtca 608137  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    || ||||| |  | |  |||||||||||||| ||||||||| ||||||||||    
T  608136 ttcctaatcctatcctatctagtcttaccactcatccaacggaacatcctca 608085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 9568651 - 9568588
Alignment:
Q  164 ctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||||||||||||||||| ||||||  |   ||||||||||||||||||||||||||||||||||    
T  9568651 ctctaatgttgtcatttataattctatcatgtctagtcttaccacacatccaacgcaacatcct 9568588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 20427875 - 20427992
Alignment:
Q  108 ctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttacca 207  Q
    ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| ||||||| ||||| |  | | |||| ||| |||||    
T  20427875 ctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattcctaatcctatcctgtcttgtcctacca 20427970  T
Q  208 cacatccaacgcaacatcctca 229  Q
    | |||||| |||||||||||||    
T  20427971 ctcatccagcgcaacatcctca 20427992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 5129123 - 5129193
Alignment:
Q  159 tctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||| |||||||||||||| || |  | || | ||||||||||||| ||||||||||||||||    
T  5129123 tctctctctaatattgtcatttctaatccgatcacatcgaatcttaccacacattcaacgcaacatcctca 5129193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 7513616 - 7513666
Alignment:
Q  94 catgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||| ||||||||||||| ||||||||| ||||||| ||||||||    
T  7513616 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 7513666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 31818680 - 31818539
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||||| ||||||| ||||||| | ||| | ||| || ||||||||| |      | ||||||| |||||||||||| |  |||||  |    
T  31818680 agtttttctaggtcttctcctacctttagtgatctcactaccctccatatgatctactttccttactgcagaatcaacaggtcttctctcatcatgca-a 31818582  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    || |||||||||||| |||| |||||||||| |||||||||||    
T  31818581 aaccacctaagtctattttccaccattttttgtactataggtg 31818539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 3963948 - 3963895
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatc 60  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||  |||||||    
T  3963948 agtttttctaggtcttcctctacctctggtgatttgactcccctccttctgatc 3963895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 6293585 - 6293674
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctca 157  Q
    |||| |||| |||||| ||||| ||||||||||||| ||||| |  |||||||| ||||| |||| ||||||||||  ||||||| ||||    
T  6293585 tacataatctacaggtgttctctctacatgcccaaaccacctgaacctagtttccaccatattttgtactataggtaccaccccacctca 6293674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 229
Target Start/End: Original strand, 14389379 - 14389517
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatt 179  Q
    |||||||||| ||||||| ||||| ||||||||| | ||||| ||||| |||||||| |||||||  ||| || |||      |||||||| | ||||||    
T  14389379 aggtcttctctctacatgtccaaaccacctaagttt-gtttccaccatcttttctacgataggtgctacctcaactc------tctctaatatggtcatt 14389471  T
Q  180 tctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    || |||||    |  ||||||||||||||||||||||||||||| |||||    
T  14389472 tcaaattc----ctatctagtcttaccacacatccaacgcaacaacctca 14389517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 26291848 - 26291786
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtc 146  Q
    |||||||| ||||||||  ||| |||||||||||| |||||||||| ||||||| ||||||||||    
T  26291848 gtcttctctctacatgc--aaaccacctaagtctattttctaccatattttctattataggtgtc 26291786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 43266 - 43326
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggt 143  Q
    ||||||| ||||||| ||| | |||||||| |||||||| ||||||||||||| |||||||    
T  43266 tcttctctctacatggccagaccacctaagcctagtttccaccattttttctattataggt 43326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 14030876 - 14030732
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    ||||||||  |||||| ||||| ||  |||| ||| | |||||||  ||||||||||||||||  |||||    |||| ||||||||||| ||||||| |    
T  14030876 gtcttctctatacatgtccaaaccatttaagcctattatctaccaacttttctactataggtgctacccc----cactatctctctaatggtgtcattcc 14030781  T
Q  182 taattcggttccgtctagtctt-accacacatccaacgcaacatcctca 229  Q
    |||| |  | | |||||||||| ||||| |||||| |||||||||||||    
T  14030780 taatcctatcctgtctagtcttaaccactcatccatcgcaacatcctca 14030732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 21870200 - 21870348
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaa 103  Q
    |||||||||||||||| || ||| ||||||||||||| ||||| |||| ||||||| |      |||| |||| |||||||||||| ||| ||||| |||    
T  21870200 tttttctaggtcttcctctgcctttagtgatttgactactctccatcttatctactctccttactacaaaatctacaggtcttctctctaaatgcctaaa 21870299  T
Q  104 t--------cacctaagtctagtttctaccattttttctactataggtg 144  Q
    |        |||||||| | |||||||||||| |||||||||| |||||    
T  21870300 tgcccaaaccacctaagccgagtttctaccatcttttctactacaggtg 21870348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 30679476 - 30679417
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactata 140  Q
    ||||| ||| |||||||||||||||| ||||| ||| |||||||||  ||||||||||||    
T  30679476 ggtctcctctctacatgcccaaatcatctaagcctattttctaccaacttttctactata 30679417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 32400160 - 32400113
Alignment:
Q  138 ataggtgtcaccccagctcactctctctctaatgttgtcatttctaat 185  Q
    ||||| || |||||| ||| ||||||||||||||||||||||||||||    
T  32400160 ataggcgttaccccaactctctctctctctaatgttgtcatttctaat 32400113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 225
Target Start/End: Original strand, 7513305 - 7513335
Alignment:
Q  195 tctagtcttaccacacatccaacgcaacatc 225  Q
    |||||||||||||||||||||||||||||||    
T  7513305 tctagtcttaccacacatccaacgcaacatc 7513335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 12134187 - 12134257
Alignment:
Q  159 tctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||| ||||||||||||||||  |  | ||| ||||| ||||||||||||| |||||| ||||    
T  12134187 tctctctctaatattgtcatttctaattctatatcatcttgtcttgccacacatccaacacaacattctca 12134257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 4948628 - 4948661
Alignment:
Q  194 gtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||||||||||||||||||||||| ||||||||||    
T  4948628 gtctagtcttaccacacatccaaagcaacatcct 4948661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 4955599 - 4955632
Alignment:
Q  194 gtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||||||||||||||||||||||| ||||||||||    
T  4955599 gtctagtcttaccacacatccaaagcaacatcct 4955632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 4598695 - 4598916
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||| | || |||||||||||||  ||||||| ||| || | ||||  ||||     |||| ||| |||| |||||||  ||| ||| |||    
T  4598695 agtttttctaggtttaccactacctctagtgacctgactcccctccattttatctgttatacttactacaaaattcacaagtcttctttctatatgtcca 4598794  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || |||| |||||||||||||||||| ||| ||||||||||||  |||||| |||  |||||||||||||| |||||||  |||||  | ||||||||||    
T  4598795 aaccaccaaagtctagtttctaccatctttactactataggtgctaccccaactc--tctctctctaatgtcgtcattttgaattctatcccgtctagtc 4598892  T
Q  202 ttaccacacatccaacgcaacatc 225  Q
    ||||||||||||||||||||||||    
T  4598893 ttaccacacatccaacgcaacatc 4598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 44437854 - 44438003
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatcta-----ctatatacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||| |||| |||||     ||   ||||||||||||| |||||||| ||||||||| |    
T  44437854 agtttttctaggtctacccctacctctagtgatctgactcccctccatctcatctatactccttattacagaatccacaagtcttctctctacatgccga 44437953  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcacccc 151  Q
    || |||||| |||||||||||||||| |||||||||||||| || |||||    
T  44437954 aaccacctatgtctagtttctaccatcttttctactataggggttacccc 44438003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 229
Target Start/End: Original strand, 9556568 - 9556724
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    ||||||||| ||  |||||||| ||||||||| ||| |||||||| ||| |||| ||||||||| |||||||| |||| ||||||    ||| |||||||    
T  9556568 tacagaatctacttgtcttctctctacatgcctaaaccacctaagcctattttccaccattttt-ctactataagtgttacccca----actttctctct 9556662  T
Q  168 aatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||    | ||||||| |||||||||||||||||| |||||||||||    
T  9556663 aatgttgtcatttctaatcatatcccgtctaatcttaccacacatccaacacaacatcctca 9556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 38452897 - 38453045
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||| ||  |||||  ||| |||||||||||||| |||||||     
T  38452897 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgctacccccactctctctctctctaatggtgtcattc 38452996  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  38452997 ctaatcctatgatgtctagtcttaccactcatccaacgcaacatcctca 38453045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 229
Target Start/End: Complemental strand, 8180857 - 8180706
Alignment:
Q  74 atccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgtt 173  Q
    |||||||||||||||| ||||||||||||| || |||||  || |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |    
T  8180857 atccacaggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctacccc----cactctctctctaatggt 8180762  T
Q  174 gtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||| ||||| |  |   ||||||||||||||| |||||||| |||||||||||    
T  8180761 gtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctca 8180706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 123
Target Start/End: Complemental strand, 42543384 - 42543263
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||| || ||||||||| |      ||||||||||||||||||||||  ||||||||||    
T  42543384 agtttttctaggtctacccctacctctagtgatctgactcccctccatttgatctactctcctaactacagaatccacaggtcttctctgtacatgccca 42543285  T
Q  102 aatcacctaagtctagtttcta 123  Q
    || ||||||||| |||||||||    
T  42543284 aaccacctaagtttagtttcta 42543263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 43832239 - 43832068
Alignment:
Q  15 taggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaatcacct 109  Q
    |||||||||| || | |||| |||||||| | ||||| |||||||||||| |      |||| |||||||| || |||||  ||||||||||||||||||    
T  43832239 taggtcttcctctgcgtctactgatttgattactctccatctgatctactctcctaactacataatccacatgttttctctgtacatgcccaaatcacct 43832140  T
Q  110 aagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    ||| |||||||| || || |||| |||||||||||  |||||| ||| |||||||||||||||||||||||||    
T  43832139 aagcctagtttccac-atattttttactataggtgataccccaactctctctctctctaatgttgtcatttct 43832068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 229
Target Start/End: Original strand, 41763251 - 41763397
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||||||| || |||| ||||| |||||||| ||| |||||||||  ||||||||||||||||| ||||     |||||||||||||||| |||||    
T  41763251 acaggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtgttaccc-----cactctctctctaatggtgtca 41763345  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    || ||||| |  |   ||||||||||||||| |||||| |||||||||||||    
T  41763346 ttcctaatcctatcttgtctagtcttaccactcatccatcgcaacatcctca 41763397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 11412869 - 11412695
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgact-cctctctatctgatctactatatac---agaatccacaggtcttctcactacatgcccaa 102  Q
    ||||||||||||| |||| ||  |||||||||| ||||| || ||| |||||||||||| | |||   |||||| |||| |||| || ||| ||||||||    
T  11412869 agtttttctaggttttcctctggctctagtgatctgactacccctccatctgatctactctctactacagaatctacagttcttatctctaaatgcccaa 11412770  T
Q  103 atcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |  ||||||| ||| |||| ||||| ||||||||||||||||  ||||||    |||||||||||||||||||||||||    
T  11412769 acaacctaagcctattttccaccatattttctactataggtgctacccca----actctctctctaatgttgtcatttc 11412695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 38435021 - 38434877
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaa-gtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||  |||||||||||| |||| || |||||||||| ||||| ||||||||||||||||  ||||||    | ||||||||||||||||||||||    
T  38435021 gtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctacccca----attctctctctaatgttgtcattt 38434926  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||    |  |||||||| ||||||| ||||||| ||||||||||||    
T  38434925 ctaatcttctctcgtctagttttaccacgcatccaatgcaacatcctca 38434877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 12734769 - 12734627
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    |||||||||  |||||| ||||| || ||||| ||| ||||||||| |||||||||||||||||  |||||      | |||||||||||| ||||||||    
T  12734769 ggtcttctctttacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgctacccc------cactctctctaatggtgtcattt 12734676  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | ||||||||||||||||| |||||| | |||||||||||    
T  12734675 ctaatcctatcccgtctagtcttaccactcatccagcacaacatcctca 12734627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 40759169 - 40759069
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| |||||||| |||| ||||||| ||||||||| |||||||||||||||||| |||  | |||| |   ||||||||||||||||||||||||    
T  40759169 gtcttctctctacatgcacaaaccacctaactctagtttccaccattttttctactataagtgctaacccaac---ctctctctctaatgttgtcatttc 40759073  T
Q  182 taat 185  Q
    ||||    
T  40759072 taat 40759069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 224
Target Start/End: Original strand, 23714394 - 23714609
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||| ||||||  |||| ||||||||||||||||| | | || ||||||||| |      |||| |||||||| |||||||| ||||||||| |    
T  23714394 agtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctccttactacataatccacaagtcttctctctacatgccta 23714493  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    ||  || ||||||||||||| ||||| |||||||||||| |||  |||| |       |||| |||||||| ||||||| |||| |  ||  ||||||||    
T  23714494 aactacataagtctagtttccaccatcttttctactatatgtgctacccaa-------ctctatctaatgtcgtcatttttaatcctattttgtctagtc 23714586  T
Q  202 ttaccacacatccaacgcaacat 224  Q
    |||||||||||||||| ||||||    
T  23714587 ttaccacacatccaacacaacat 23714609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 224
Target Start/End: Original strand, 24102066 - 24102281
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||| ||||||  |||| ||||||||||||||||| | | || ||||||||| |      |||| |||||||| |||||||| ||||||||| |    
T  24102066 agtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctccttactacataatccacaagtcttctctctacatgccta 24102165  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    ||  || ||||||||||||| ||||| |||||||||||| |||  |||| |       |||| |||||||| ||||||| |||| |  ||  ||||||||    
T  24102166 aactacataagtctagtttccaccatcttttctactatatgtgctacccaa-------ctctatctaatgtcgtcatttttaatcctattttgtctagtc 24102258  T
Q  202 ttaccacacatccaacgcaacat 224  Q
    |||||||||||||||| ||||||    
T  24102259 ttaccacacatccaacacaacat 24102281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 229
Target Start/End: Original strand, 16097195 - 16097346
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||||||| ||||||| |||||||| ||||| ||| |||||||||  ||||||| ||||||||  |||||  |||   |||||||||| | |||||    
T  16097195 acaggtcttctctctacatgtccaaatcatctaagcctattttctaccaacttttctattataggtgctacccccactctaactctctctaacggtgtca 16097294  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||    | || |||||||||||||| ||||||  ||||||||||||    
T  16097295 tttctaatcatatcccatctagtcttaccactcatccagtgcaacatcctca 16097346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 38429954 - 38429810
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    |||||||||  |||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||   ||||    |||||||||||||||| |||||||     
T  38429954 ggtcttctctttacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctgcccc----cactctctctctaatggtgtcattc 38429859  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  38429858 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 38429810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 185
Target Start/End: Original strand, 37481750 - 37481929
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||| |||||||  ||||||| |||||| | ||||| ||| |||||||||||| |      |||| ||| |||| |||||||| |||||||| ||    
T  37481750 agtttttcttggtcttcatctacctccagtgatctaactcccctccatctgatctactctcctaactacaaaattcacaagtcttctctctacatgctca 37481849  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaat 185  Q
    || |||||||| |||| ||| ||||| |||| |||||||||    ||||||    |||||||||||||||||||||||||||||    
T  37481850 aaccacctaagcctaggttcaaccatcttttttactataggaactacccca----actctctctctaatgttgtcatttctaat 37481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 43752158 - 43752259
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatt 179  Q
    |||||||||| ||||||| |||||||||||||| ||| |||||||||  ||||||||||||||||  ||||||    |||||||||||||| | |||| |    
T  43752158 aggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctacccca----actctctctctaatatggtcagt 43752253  T
Q  180 tctaat 185  Q
    ||||||    
T  43752254 tctaat 43752259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 3866142 - 3866002
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||| |||| || ||||| ||| |||||||||  |||| |||||||||||  |||||    ||||||||||| |||| |||||||     
T  3866142 ggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttttactataggtgctacccc----cactctctctccaatggtgtcattc 3866047  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||||| |  |   ||||||||||||||| ||||||||||||||||    
T  3866046 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatc 3866002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 25834758 - 25834650
Alignment:
Q  74 atccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgtt 173  Q
    |||||||||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||  | | |||||||||||||| |    
T  25834758 atccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc--cactctctctctctaatggt 25834661  T
Q  174 gtcatttctaa 184  Q
    |||||| ||||    
T  25834660 gtcattcctaa 25834650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 36183521 - 36183377
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||| ||| || |||||  || |||||||||  ||||||||||||||||  |||||     ||||||||||||||  |||||||     
T  36183521 ggtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgctacccct----actctctctctaattgtgtcattc 36183426  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  36183425 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 36183377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 45077838 - 45077674
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacct---aagtctagtttctaccattttttctactataggtgtcaccccagctcactctctc 164  Q
    |||| |||| ||| || ||||| ||||||||| ||| |||||   ||||||| | || ||||| ||||||||||||| ||  || | | ||| ||||| |    
T  45077838 tacaaaatctacaagttttctctctacatgccaaaaccacctcccaagtctactctccaccatcttttctactatagatgctactcaaactctctctccc 45077739  T
Q  165 tctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |||  ||||||||||||  |   ||||||||||||||||||||||||||||||||||||    
T  45077738 tctaaagttcacatttctaattctatctagtctagtcttaccacacatccaacgcaacatcctca 45077674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 227
Target Start/End: Complemental strand, 7825440 - 7825286
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaat 170  Q
    |||||| ||| |||||||| |||||||| |||| || |||||  || |||  ||||| ||| | ||||||||||  || ||| |  ||||||||||||||    
T  7825440 agaatctacatgtcttctctctacatgctcaaaccaactaagcttatttttcaccatatttacaactataggtgctactccaac--actctctctctaat 7825343  T
Q  171 gttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
      |||||||||||||    | | ||||||||||||||||||||||||||||||||||    
T  7825342 agtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 7825286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 19235117 - 19235174
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||    
T  19235117 agtttttctaggtcttcctctatctctagtgatttgactcccctccatctgatctact 19235174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 9578912 - 9579053
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||||||| ||||||| ||||| |||||||||||| |||  | ||| ||| |||||||| |||||||||||       ||||||||||  ||||||    
T  9578912 acaggtcttctctctacatgtccaaaccacctaagtctattttacatcatctttactactatatgtgtcacccca------actctctctaacattgtca 9579005  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||| ||||||  |    |||| ||||||||||||||||||||||||||    
T  9579006 tttttaattctatcatatctattcttaccacacatccaacgcaacatc 9579053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 12141690 - 12141538
Alignment:
Q  10 ttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcccaaat 104  Q
    ||||||||||||||| |||||||| || ||||||||   ||| |||||||||||| |      || |||||| |||||||||||  |||| ||||||||     
T  12141690 ttttctaggtcttcctctacctcttgtaatttgactatcctcaatctgatctactctccttactagagaatctacaggtcttctttctacgtgcccaaac 12141591  T
Q  105 cacctaagtctagtttctaccattttttctactataggtgtcaccccagctca 157  Q
    |||||||| ||  |||| ||||| ||||||||||||||||  |||||| ||||    
T  12141590 cacctaagcctcttttccaccatcttttctactataggtgctaccccaactca 12141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 2610525 - 2610454
Alignment:
Q  158 ctctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||| ||||||| ||||| | || | ||||||||||||||| ||||||||||| ||||||||    
T  2610525 ctctctctctaatggtgtcattcctaatcctgtcctgtctagtcttaccactcatccaacgcagcatcctca 2610454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 225
Target Start/End: Complemental strand, 42092584 - 42092449
Alignment:
Q  84 cttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttcta 183  Q
    |||||| ||||||||||| |||||||||   ||||||||||||| ||||||| |||||| |  ||||||       ||||||||||  ||||||||||||    
T  42092584 cttctctctacatgcccagatcacctaatcttagtttctaccatcttttctagtataggcgctacccca------actctctctaacattgtcatttcta 42092491  T
Q  184 attcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    ||    | |||||||||||||| |||||||||| ||||||||    
T  42092490 atcatatcccgtctagtcttactacacatccaatgcaacatc 42092449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 5759128 - 5759185
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||||||||||| || |||||||||||||||||||| ||| ||| ||||||||||||    
T  5759128 agtttttctaggtatttccctacctctagtgatttgattcccctccatctgatctact 5759185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 13240947 - 13241057
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaat 170  Q
    |||||| ||| |||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||  |||  ||  || |||    | ||||||||||||    
T  13240947 agaatctacatgtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttctaacatacttgctactcca----attctctctctaat 13241042  T
Q  171 gttgtcatttctaat 185  Q
    |||||||||||||||    
T  13241043 gttgtcatttctaat 13241057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 4807629 - 4807518
Alignment:
Q  118 tttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaac 217  Q
    |||||||||  ||||||||||||||||  |||||  ||| |||||||||||||| |||||||  |||| |  |   ||||| ||||||||  ||||||||    
T  4807629 tttctaccaacttttctactataggtgctacccccactctctctctctctaatgatgtcattcataatcctatcatgtctattcttaccattcatccaac 4807530  T
Q  218 gcaacatcctca 229  Q
    ||||||||||||    
T  4807529 gcaacatcctca 4807518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 229
Target Start/End: Original strand, 9647927 - 9647961
Alignment:
Q  195 tctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||||||||||||||||||    
T  9647927 tctagtcttaccacacatccaacgcaacatcctca 9647961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 24583844 - 24583910
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtca 147  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||| |||||||||||    
T  24583844 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgtca 24583910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 2610657 - 2610572
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||||||| ||||||||||||| || ||||| ||| |||||||||  ||||| ||||||||||  |||||  ||| ||||||||||    
T  2610657 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctacccccactctctctctctct 2610572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 14197364 - 14197437
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaa-gtctagtttctaccattttttctactataggt 143  Q
    |||||| ||| |||||| | ||||||||||||| ||||||| | |||||||| ||||| |||||||||||||||    
T  14197364 agaatctacaagtcttcactctacatgcccaaaccacctaaagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 41779519 - 41779575
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctac 136  Q
    |||||||||| |||||||  |||| |||||||||| |||||| ||||||||||||||    
T  41779519 aggtcttctctctacatgatcaaaccacctaagtcgagtttccaccattttttctac 41779575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 7293749 - 7293694
Alignment:
Q  9 tttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||||||||| | |||||||||||||||||  |||| ||||| ||||||||||||    
T  7293749 tttttctaggtttacccctacctctagtgatccgacttctctccatctgatctact 7293694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 43238305 - 43238368
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||  |||||||||||| || ||||| ||| |||||||||  ||||||||||||||||    
T  43238305 ggtcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 43238368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 13149400 - 13149315
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||||||| ||||||| ||| | |||| ||||||| |||||| ||| |||||   ||||||||  |||||| ||||||||||||||    
T  13149400 gtcttctctctacatggccagaccaccgaagtctattttctatcatcttttcgtttataggtgctaccccaactcactctctctct 13149315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 23997616 - 23997547
Alignment:
Q  156 cactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    |||||| ||||||||| ||||||| ||||| || |   ||||||||||||||| |||||| |||||||||    
T  23997616 cactctatctctaatggtgtcattcctaatccgatcatgtctagtcttaccactcatccagcgcaacatc 23997547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 786873 - 786837
Alignment:
Q  108 ctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  786873 ctaagtctagtttctgccatcttttctactataggtg 786837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 9647811 - 9647883
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggt 143  Q
    |||||| |||||||||||   |||||| ||||| |||||||  |||||||| |||||  ||||||||||||||    
T  9647811 agaatctacaggtcttctttttacatgtccaaaccacctaaagctagtttccaccatcatttctactataggt 9647883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 19527858 - 19527894
Alignment:
Q  193 cgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| |||||| |||||||||||||||||||||||||    
T  19527858 cgtccagtcttgccacacatccaacgcaacatcctca 19527894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 26784473 - 26784529
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctac 63  Q
    |||||||||||||||| | || ||||||||||||||||| | ||| |||| ||||||    
T  26784473 agtttttctaggtctttctctgcctctagtgatttgactaccctccatcttatctac 26784529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 52138873 - 52138726
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||    
T  52138873 acaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtca 52138778  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    || ||||| |  |   ||||||||||||||| ||||||||||||||||||||    
T  52138777 ttcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctca 52138726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 28245503 - 28245363
Alignment:
Q  85 ttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaa 184  Q
    ||||| ||||||||||||| || ||||||||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| ||||||| ||||    
T  28245503 ttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactataggtgctacccc----cactctctctctaatgatgtcattcctaa 28245408  T
Q  185 ttcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    | |  | | | ||||||||||||| ||||||||||||||||||||    
T  28245407 tcctatccaggctagtcttaccactcatccaacgcaacatcctca 28245363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 21200697 - 21200561
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| || || |||||||||||||| ||||| || ||||||||| |      | ||||||| ||| |||||||| |||||||||||    
T  21200697 agtttttctaggtcttcctctccccctagtgatttgactactctccatgtgatctactctccttactgcagaatctacatgtcttctctctacatgccca 21200598  T
Q  102 aatcacctaagtctagtttctaccattttttctacta 138  Q
    || ||||||||||||||||| ||||| ||||||||||    
T  21200597 aaccacctaagtctagtttccaccatcttttctacta 21200561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 54128451 - 54128304
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    ||||||||| || ||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||  ||||||    || |||||||||||| |||||    
T  54128451 acaggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacccca----acactctctctaatggtgtca 54128356  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||  |||| |  |  |||||||| ||||||| |||| |||||||||||||||    
T  54128355 ttcataatcctatcgcgtctagttttaccactcatcaaacgcaacatcctca 54128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 3987116 - 3987015
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||    |||||||||| ||| | ||||||||    
T  3987116 gtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtgatacccca----actctctctccaatatcgtcatttc 3987021  T
Q  182 taattc 187  Q
    ||||||    
T  3987020 taattc 3987015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 186
Target Start/End: Original strand, 31454358 - 31454538
Alignment:
Q  7 agtttttctaggtcttcccctac--ctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgcc 99  Q
    |||||||||||||| ||||||||  |||||  ||||||||||| ||| |||||||||||| |      |||||||||| ||  ||||||| ||||||||     
T  31454358 agtttttctaggtcatcccctacatctctaaagatttgactcccctccatctgatctactctcctaactacagaatccgcatttcttctctctacatgca 31454457  T
Q  100 caaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaatt 186  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||     | | |  || |||||||||||||||||||||||||||    
T  31454458 caaaccacc-aagtctagtttctaccatcttttctactataggtg-----ctaaccaacactctctctaatgttgtcatttctaatt 31454538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 37351556 - 37351413
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactat-----atacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||||||||||||||||||||| ||||  || |||||||||||| |      ||| | || |||| | |||||| | |||||||||    
T  37351556 agtttttctaggtcttcccctacctctagtgatttgcctcccttccatctgatctactctccttactaccgcattcacatgacttctctccacatgccca 37351457  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgt 145  Q
    || |||  |||||||||||||||||| |||||||||||| ||||    
T  37351456 aaccactcaagtctagtttctaccatcttttctactataagtgt 37351413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 51447924 - 51448065
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    ||||||| |||||||||||||  | ||||| ||| |||||||||  ||||||||||||||||  |||| |     |||||||||||||| ||||||| ||    
T  51447924 tcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctacccta-----ctctctctctaatggtgtcattcct 51448018  T
Q  183 aattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||| |  | | ||||||||||||||| ||||||||||||||||||||    
T  51448019 aatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 51448065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 11581593 - 11581460
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    ||||||||||||||||| | ||||||||||||||||||||  ||  ||||||| |||| |      |||| ||| |||| |||||||| |||||| ||||    
T  11581593 agtttttctaggtcttctcatacctctagtgatttgactcacctacatctgatgtactcttcttactacataattcacatgtcttctctctacataccca 11581494  T
Q  102 aatcacctaagtctagtttctaccattttttcta 135  Q
    || ||||||||||||||||||||||| |||||||    
T  11581493 aaccacctaagtctagtttctaccatcttttcta 11581460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 212
Target Start/End: Original strand, 39600814 - 39601020
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactata-----tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||||||||||| |||||||| |  || |||||   ||| |||||||||||| |      ||||||||| ||||||||||||  |||||||| |    
T  39600814 agtttttctaggtcttcctctacctcttgcaatctgactatcctcgatctgatctactctcctcgctacagaatctacaggtcttctctttacatgccaa 39600913  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtc 201  Q
    || ||||||||  |  |||| ||||| |||||||||||||||   ||||||    |||||||||||||||||||||||||||||    | || |||||||    
T  39600914 aaccacctaagcttgttttccaccatcttttctactataggtactacccca----actctctctctaatgttgtcatttctaatcttatcccatctagtc 39601009  T
Q  202 ttaccacacat 212  Q
    |||||||||||    
T  39601010 ttaccacacat 39601020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 54279090 - 54278946
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||| |||||||| |  ||||| ||| |||||||||  ||||||||||||||||  |||||     ||||||||||||||| |||||||     
T  54279090 ggtcttctctctacgtgcccaaaccgtctaagcctattttctaccaacttttctactataggtgctacccct----actctctctctaatggtgtcattc 54278995  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||  |   |||||||||||||||  |||||||||||||||||||    
T  54278994 ctaattctatcttgtctagtcttaccacttatccaacgcaacatcctca 54278946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 49503766 - 49503897
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||  |||  |    ||||||||||||||| |||||||     
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacctga----actctctctctaatggtgtcattc 49503861  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaa 216  Q
    | ||| |  |  |||||||||||||||| |||||||    
T  49503862 ccaatcctatctcgtctagtcttaccactcatccaa 49503897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 50960844 - 50960908
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||    
T  50960844 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtg 50960908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 22142 - 21999
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| || ||||     
T  22142 ggtcttctctctacatgtccaaaccatctaagccta-tttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgacattc 22048  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  |   ||||||||||||||| |||||| |||||||||||||    
T  22047 ctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctca 21999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 19737070 - 19736926
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg-tcaccccagctcactctctctctaatgttgtc 176  Q
    |||||||||||| || ||||| |||| |||||||  ||| |||||||||| |||||||||||||||| |  |||||    ||||||||||||||| | ||    
T  19737070 acaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgccccca----actctctctctaatgatttc 19736975  T
Q  177 atttctaattcggttccgtctagtcttaccacacatccaacgcaacatc 225  Q
    | |||||||    | ||||||||||||||||| |||||||| |||||||    
T  19736974 acttctaatcgtatcccgtctagtcttaccactcatccaacacaacatc 19736926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 36820173 - 36820309
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    |||||||||  |||||| | ||| |||||||| |||||||| ||||| ||| ||| ||||||||  |||||| |||      |||||||||| |||||||    
T  36820173 ggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgctaccccaactc------tctctaatgtcgtcattt 36820266  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaaca 223  Q
    ||||| |  |  |||||||||||||||||||||||||||||||    
T  36820267 ctaatcctatctcgtctagtcttaccacacatccaacgcaaca 36820309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 46568113 - 46568042
Alignment:
Q  158 ctctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||||||||||||||||||  |   ||||||||||| |||||||||||| |||||||||||    
T  46568113 ctctctctctaatgttgtcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcctca 46568042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 47233808 - 47233952
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||  ||| |    || ||||||||||||| ||||||||    
T  47233808 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctacctc----cattctctctctaatggtgtcattt 47233903  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||    |   ||||||||||||||| |||||||||||| |||||||    
T  47233904 ctaatcttatcatgtctagtcttaccactcatccaacgcaatatcctca 47233952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 50249467 - 50249311
Alignment:
Q  71 agaatccacaggtcttctcactacatgcccaaatcacc---taagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctct 167  Q
    |||||| ||| |||||| | ||||||||||||| ||||   ||||||||||||| ||||| |||||||||||| | |  ||||||    |||||||||||    
T  50249467 agaatctacatgtcttcactctacatgcccaaaccaccacctaagtctagtttccaccatcttttctactatacgcgctacccca----actctctctct 50249372  T
Q  168 aatgttgtcatttctaat--tcggttc-cgtctagtcttaccacacatccaacgcaacatc 225  Q
    |||||| |||||||||||  ||   || ||||||||| |||||||||||||||| ||||||    
T  50249371 aatgttatcatttctaatcatcctatctcgtctagtcctaccacacatccaacgaaacatc 50249311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 38430997 - 38430855
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact----ata-tacagaatccacaggtcttctcactacatgccca 101  Q
    |||||||||| ||||||| ||||||||  |||||||||||  ||| ||||||||||||    ||| ||||  |||  |||||| |||| |||||||||||    
T  38430997 agtttttctaagtcttcctctacctcttttgatttgactctcctccatctgatctactcttcatactacaacatctgcaggtcgtctctctacatgccca 38430898  T
Q  102 aatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |   ||||||| ||| |||||||||| ||||||||||||||||    
T  38430897 atcaacctaagcctattttctaccatcttttctactataggtg 38430855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 344920 - 345065
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    ||||||| |||| ||||||| |||||  || |||| ||| |||||| ||| |||||||||||| |||  ||||||    ||||||||||||||||  |||    
T  344920 acaggtcctctctctacatgaccaaactacttaagcctattttctaacatcttttctactataagtgctacccca----actctctctctaatgtcatca 345015  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    |||||||| |  |  ||||||||||||||||| |||||||  ||||||||    
T  345016 tttctaatcctatctcgtctagtcttaccacaaatccaacataacatcct 345065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 3365149 - 3365008
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    ||||||| ||||||||  ||||||  ||||||||||||||||||||||||  |||| |||||| ||||||    |  ||||||| ||| |||||||||||    
T  3365149 tcttctctctacatgctaaaatcatataagtctagtttctaccatttttttaactagaggtgttacccca----aaactctctccaatattgtcatttct 3365054  T
Q  183 aattcggttccgtctagtcttaccacacatccaacgcaacatcctc 228  Q
    |||||  |  ||||||  || ||||||||||| || ||||||||||    
T  3365053 aattctatgtcgtctaacctaaccacacatccgacacaacatcctc 3365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 5168902 - 5168754
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| |||||||  |||| || |||||  || |||||||||  |||||||| |||||||  |||||  ||| |||||||||||||| |||||||     
T  5168902 ggtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccataggtgctacccccactctctctctctctaatggtgtcattc 5168803  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||| |  | | |||||||||||||   |||||| |||||||||||||    
T  5168802 ctaatcctatcctgtctagtcttacctatcatccagcgcaacatcctca 5168754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 29375017 - 29374941
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||| |||| ||||||||| || ||||| |||||||||||||||||| |||||||||||| |||||| | |||||||    
T  29375017 tacaaaatctacaggtcttttctctacaagcccaaatcacctaagtcgagtttctaccatcttttctccaataggtg 29374941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 2341003 - 2341070
Alignment:
Q  162 ctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||| |||||||||||||  |   ||||||||||||||||||||||| ||||||||||||    
T  2341003 ctctctaatgttttcatttctaattctatcatgtctagtcttaccacacatccaatgcaacatcctca 2341070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 49841688 - 49841537
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggt------gtcaccccagctcactctctctctaatgttgt 175  Q
    |||||||| ||||| ||||||| ||||| ||||||||||| ||||| ||||||| |||||||      |  |||||| ||  ||||||| ||||||||||    
T  49841688 gtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgctacggctaccccaact--ctctctcactaatgttgt 49841591  T
Q  176 catttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||       ||||||||||||| ||||||||||| |||||||||||    
T  49841590 catttctaatcttacctcgtctagtcttactacacatccaacacaacatcctca 49841537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 45236850 - 45236784
Alignment:
Q  161 tctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    ||||||||||| |||||||||||||    | | ||||||||||||||||||||||||||||||||||    
T  45236850 tctctctaatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 45236784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 38054624 - 38054693
Alignment:
Q  160 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||| ||||||||||| |  | ||||||||||||||||| ||| ||||||||||| ||||    
T  38054624 ctctctctaatgttatcatttctaatcctatcccgtctagtcttaccacccattcaacgcaacattctca 38054693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 38060504 - 38060399
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||| ||||||||  |||||  ||| |||||||||||| | ||||     
T  38060504 acaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctacccccactctctctctctctaacggtgtct 38060405  T
Q  178 tttcta 183  Q
    ||||||    
T  38060404 tttcta 38060399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 39235211 - 39235154
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttcta 135  Q
    |||||||||||| ||||||||||||| |||||||| ||| |||||||||| |||||||    
T  39235211 acaggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 39535639 - 39535716
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgt 145  Q
    ||||||||| | |||||||||| |||| |||| ||| |||||||| |  ||||||||||| |||||||||||||||||    
T  39535639 tacagaatctataggtcttctctctacttgcctaaaccacctaagccgggtttctaccatcttttctactataggtgt 39535716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 45289290 - 45289434
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctact--ataggtgtcaccccagctcactctctct 165  Q
    |||| |||| ||| || ||||| |||| |||||||| |||||||| ||| |||| ||||| |||||||||  |||||||  |||||| |||  |||||||    
T  45289290 tacaaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctactgaataggtgctaccccaactc--tctctct 45289387  T
Q  166 ctaatgttgtcatttctaattcggttccgtctagtcttaccacacatc 213  Q
    ||||||| ||||||||||||    | ||||||||||||| ||||||||    
T  45289388 ctaatgt-gtcatttctaatcttatcccgtctagtcttatcacacatc 45289434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 19676212 - 19676446
Alignment:
Q  5 acagtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctactatat-----acagaatccacaggtcttctcactacatgcc 99  Q
    ||||||||||||||||||||  |||||||  |||| ||||||  ||||||||||||| || | |     |||| ||| |||||||||||| |||||||||    
T  19676212 acagtttttctaggtcttcct-tacctcttttgatctgactctcctctatctgatcttctctttgtactacagcatctacaggtcttctctctacatgcc 19676310  T
Q  100 caaatcacctaagtctagtttctaccattttttctactataggtgtcacccca------gctcactctctctctaatgttgtcatttctaattcggttcc 193  Q
     | | |||||||| | | |||||| ||| |||| |||||||||||  ||||||       ||| |||||||||||||| ||||| | |||||    | ||    
T  19676311 aataccacctaagccaattttctatcatcttttgtactataggtgctaccccaacactctctctctctctctctaatggtgtcactcctaatcttatccc 19676410  T
Q  194 gtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||||||||||| | ||||||| ||||||||||||    
T  19676411 atctagtcttaccgctcatccaatgcaacatcctca 19676446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 19757973 - 19757829
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg-tcaccccagctcactctctctctaatgttgtc 176  Q
    |||||||||||| || ||||| |||| |||||||  ||| |||||||||| |||||||||||||||| |  |||||    ||||||||||||||| | ||    
T  19757973 acaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgccccca----actctctctctaatgatttc 19757878  T
Q  177 atttctaattcggttc-cgtctagtcttaccacacatccaacgcaacatc 225  Q
    | |||||| |||  || ||| |||||||||||| |||||||| |||||||    
T  19757877 acttctaa-tcgtatctcgtgtagtcttaccactcatccaacacaacatc 19757829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 26990362 - 26990322
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcc 47  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  26990362 agtttttctaggtcttcccctacctcgagtgatttgactcc 26990322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 31453138 - 31453214
Alignment:
Q  69 acagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttc-tactataggtg 144  Q
    ||||||| || | |||||||| ||||||||| |||  |||||||||||||||||||||| ||||| |||||||||||    
T  31453138 acagaattcagacgtcttctctctacatgccaaaacaacctaagtctagtttctaccatcttttcttactataggtg 31453214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 41842710 - 41842786
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| || | ||||||| |||||| |||||| |||||||| || ||||| ||||| ||||||||||||||||    
T  41842710 tacagaatctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtg 41842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 25191447 - 25191384
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| ||||||| ||||| || ||||||||| ||||| ||| |||||||||||||||||    
T  25191447 ggtcttctctctacatgtccaaaccatctaagtctattttcttccaatttttctactataggtg 25191384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 26490375 - 26490243
Alignment:
Q  91 ctacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggt 190  Q
    ||||||| ||||| |||||||| ||| |||||||||| ||||||||||||||||  ||| ||       |||| |||||||  |||||| |||||    |    
T  26490375 ctacatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctacctca------actctgtctaatgacgtcattgctaatcatat 26490282  T
Q  191 tccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
     |||||| |||||||||| ||||||||||||||||||||    
T  26490281 cccgtcttgtcttaccactcatccaacgcaacatcctca 26490243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 33272235 - 33272384
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctac----tataggtgtcaccccagctcactctctctctaatgttgtca 177  Q
    |||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||    ||||||||  |||||  | | |||||||||||||| |||||    
T  33272235 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatatataggtgctacccc--cactctctctctctaatggtgtca 33272332  T
Q  178 tttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||  |||| |  |   ||||||||||||||| ||||||| ||||||||||||    
T  33272333 ttcttaatcctatcatgtctagtcttaccactcatccaatgcaacatcctca 33272384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 45728180 - 45728072
Alignment:
Q  118 tttctaccattttttctactataggtgtcaccccagctcactctctctctaa-tgttgtcatttctaattcggttccgtctagtcttaccacacatccaa 216  Q
    |||||||||  |||||||||||| |||  |||||    |||||||||||||| || ||||||||||||| |  || ||||| |||||||||| ||||||     
T  45728180 tttctaccaacttttctactatatgtgctacccc----cactctctctctaaatgatgtcatttctaatcctatttcgtctcgtcttaccactcatccag 45728085  T
Q  217 cgcaacatcctca 229  Q
    |||||||||||||    
T  45728084 cgcaacatcctca 45728072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 48953645 - 48953700
Alignment:
Q  92 tacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtca 147  Q
    ||||||||||||||| |||||| || |||||||||  |||||||||||||||||||    
T  48953645 tacatgcccaaatcatctaagtttattttctaccaacttttctactataggtgtca 48953700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 46140515 - 46140445
Alignment:
Q  68 tacagaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctacta 138  Q
    ||||||||| |||||||||||| ||| ||| ||||| ||||| ||||||||||| ||| | ||||||||||    
T  46140515 tacagaatctacaggtcttctctctatatgtccaaaccacctgagtctagtttccaccgtcttttctacta 46140445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 48734344 - 48734406
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactata 140  Q
    |||| ||||||| ||||||||||||| |||||||| ||| |||||||||| | ||||||||||    
T  48734344 acagttcttctctctacatgcccaaaccacctaagcctattttctaccatctgttctactata 48734406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 31261075 - 31261131
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||||    
T  31261075 agtttttctaggtcttcctctgcctctagtgatttgactac-ctccatctgatctact 31261131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 38850188 - 38850131
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactata 140  Q
    ||||||| ||||||||||||| || ||||||||| |||||||||  ||||||||||||    
T  38850188 tcttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactata 38850131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 43255040 - 43254983
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||||||||||||| ||||||||||||||||| ||||| | ||| |||||| |||||    
T  43255040 agtttttctaggtctacccctacctctagtgatctgacttccctccatctgaactact 43254983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 22902946 - 22902890
Alignment:
Q  8 gtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    |||||||||  ||||||||||| ||||||||||| ||||| ||| ||||||||||||    
T  22902946 gtttttctatatcttcccctacatctagtgatttaactcccctccatctgatctact 22902890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 26388540 - 26388488
Alignment:
Q  92 tacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||||||||||||||  ||| |||||||||| ||||||| ||||||||    
T  26388540 tacatgcccaaatcacctaaacctattttctaccatcttttctattataggtg 26388488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 26990285 - 26990234
Alignment:
Q  74 atccacaggtcttctcactacatgcccaaatcacctaagtctagtttctacc 125  Q
    ||||||| |||||||| |||||||||| |  |||||||||||||||||||||    
T  26990285 atccacatgtcttctctctacatgccccacccacctaagtctagtttctacc 26990234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 47542033 - 47542068
Alignment:
Q  194 gtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||||||||||||||| ||||||||||||||||||||    
T  47542033 gtctagtcttaccactcatccaacgcaacatcctca 47542068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 37487164 - 37487218
Alignment:
Q  91 ctacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgt 145  Q
    ||||||||||||| ||| || |||||||||||| ||| |||||||||||| ||||    
T  37487164 ctacatgcccaaaccacataggtctagtttctaacatattttctactatatgtgt 37487218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 229
Target Start/End: Original strand, 42510333 - 42510367
Alignment:
Q  195 tctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||||||||||||||||| ||||||||||||    
T  42510333 tctagtcttaccacacatccaatgcaacatcctca 42510367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 43694974 - 43695040
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||||||||||| ||||||||||||| || |||||   | |||||||||  ||||||||||||||||    
T  43694974 acaggtcttctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactataggtg 43695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 125
Target Start/End: Complemental strand, 46568166 - 46568132
Alignment:
Q  91 ctacatgcccaaatcacctaagtctagtttctacc 125  Q
    |||||||||||||||| ||||||||||||||||||    
T  46568166 ctacatgcccaaatcaactaagtctagtttctacc 46568132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 4472553 - 4472614
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggt 143  Q
    ||||||||||||||||  ||||| || |||| ||| |||||||||| ||||||| |||||||    
T  4472553 gtcttctcactacatgttcaaattacttaagactattttctaccatcttttctattataggt 4472614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 35033216 - 35033130
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatg 171  Q
    ||||||||| ||||||| ||||| ||  |||| ||| |||||||||  ||||||||||||||||  |||||    ||||||||||||||||    
T  35033216 ggtcttctctctacatgtccaaaccatataagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatg 35033130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 40743287 - 40743320
Alignment:
Q  13 tctaggtcttcccctacctctagtgatttgactc 46  Q
    |||||||||||||||| |||||||||||||||||    
T  40743287 tctaggtcttcccctaactctagtgatttgactc 40743320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 40982045 - 40981988
Alignment:
Q  7 agtttttctaggtcttcccctacctctagtgatttgactcctctctatctgatctact 64  Q
    ||||||||||||||||||  |  |||||||||||||||| |||| |||||||| ||||    
T  40982045 agtttttctaggtcttcctttgtctctagtgatttgactactctatatctgatgtact 40981988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 53519585 - 53519512
Alignment:
Q  156 cactctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||||||| ||||||| |||||||  |||| |  | | ||||||| ||||||| ||||||||||||||||||||    
T  53519585 cactctctgtctaatggtgtcattcttaatcctatcctgtctagtattaccactcatccaacgcaacatcctca 53519512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 29600897 - 29600869
Alignment:
Q  157 actctctctctaatgttgtcatttctaat 185  Q
    |||||||||||||||||||||||||||||    
T  29600897 actctctctctaatgttgtcatttctaat 29600869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 46431992 - 46432024
Alignment:
Q  194 gtctagtcttaccacacatccaacgcaacatcc 226  Q
    ||||||||||||||||||||||| |||||||||    
T  46431992 gtctagtcttaccacacatccaatgcaacatcc 46432024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 227
Target Start/End: Complemental strand, 31538 - 31396
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcattt 180  Q
    ||||||||| ||||||||||||| || ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||     
T  31538 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattc 31443  T
Q  181 ctaattcggttccgtctagtcttaccacacatccaacgcaacatcct 227  Q
    |||||    | | ||||||||||||||| ||||||||||||||||||    
T  31442 ctaatcttatcctgtctagtcttaccactcatccaacgcaacatcct 31396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 229
Target Start/End: Original strand, 44079 - 44227
Alignment:
Q  80 aggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatt 179  Q
    |||||||||| ||||||||||||| |||||||| ||| ||||  |||| ||||||||||||||||  |||||| ||| ||     | | |  ||||||||    
T  44079 aggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctaccccaactctctaatattgtca-attgtcatt 44177  T
Q  180 tctaattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    | |||| |  | || |||||||||||| ||||||||||||||||||||||    
T  44178 tttaatactataccatctagtcttaccgcacatccaacgcaacatcctca 44227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 4484 - 4628
Alignment:
Q  82 gtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttc 181  Q
    |||||||  |||||||||||||  | ||||| ||| ||| |||||  |||||||||||||||| |||||||   | |||||||||||||| ||||||||     
T  4484 gtcttctttctacatgcccaaactatctaagcctattttttaccaacttttctactataggtgccacccca---ctctctctctctaatggtgtcattta 4580  T
Q  182 taattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |||| |  |   ||||||||||||||  ||||||||||||||||||||    
T  4581 taatcctatcatgtctagtcttaccattcatccaacgcaacatcctca 4628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 11818 - 11954
Alignment:
Q  91 ctacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggt 190  Q
    |||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||  |||||  | |  ||||||||| ||| ||||||| ||||| |  |    
T  11818 ctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccc--cactatctctctctgatggtgtcattcctaatcctat 11915  T
Q  191 tccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    |  ||||||||||||| | |||||| |||||||||||||    
T  11916 tatgtctagtcttaccgctcatccagcgcaacatcctca 11954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 25684 - 25799
Alignment:
Q  108 ctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttctaattcggttccgtctagtcttacca 207  Q
    ||||| ||| |||||||||  ||||||||||||||||  |||||    |||||||||||||||| ||||||| ||||| |  |   ||||||||||||||    
T  25684 ctaagcctattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattcctaatcctatcatgtctagtcttacca 25779  T
Q  208 cacatccaacgcaacatcct 227  Q
    | |||||||| |||||||||    
T  25780 ctcatccaacacaacatcct 25799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 101001 - 101051
Alignment:
Q  95 atgcccaaatcacctaagtctagtttctaccattttttctactataggtgt 145  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  101001 atgcccgaaccacctaagtctagtttcaaccattttttctactataggtgt 101051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 11871 - 11805
Alignment:
Q  78 acaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    |||| ||||||| ||||||||||||| |||||||| | |||| ||||||| |||||||| |||||||    
T  11871 acagatcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtg 11805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 229
Target Start/End: Complemental strand, 82789 - 82647
Alignment:
Q  83 tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtgtcaccccagctcactctctctctaatgttgtcatttct 182  Q
    ||||||| ||| ||| |||||||| ||||| | | |||||||||  ||||||||||||||||  |||||    |||||||||||||||| |||||||  |    
T  82789 tcttctctctatatgtccaaatcatctaagcccattttctaccaacttttctactataggtgctacccc----cactctctctctaatggtgtcattctt 82694  T
Q  183 aattcggttccgtctagtcttaccacacatccaacgcaacatcctca 229  Q
    ||| |  |   |||||||||||| || ||||||  ||||||||||||    
T  82693 aatcctatcatgtctagtcttactactcatccagtgcaacatcctca 82647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 1160 - 1223
Alignment:
Q  81 ggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 144  Q
    ||||||||| ||||||| ||||| || ||||| ||| |||||||||  ||||||||||||||||    
T  1160 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtg 1223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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