View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4663_high_3 (Length: 421)
Name: NF4663_high_3
Description: NF4663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4663_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 394; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 19 - 416
Target Start/End: Original strand, 7801551 - 7801948
Alignment:
| Q |
19 |
attttcataacaagttttgtagtatctaacacagaactttgttttcttgtggttatgagatttttctggtagtatctaacttaattgcttccgtattatg |
118 |
Q |
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| T |
7801551 |
attttcataacaagttttgtagtatctaacacagaactttgttttcttgtggttatgagatttttctggtagtatctaacttaattgctttcgtattatg |
7801650 |
T |
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| Q |
119 |
tttttgtcaatcaattcatttctgagttttgttatgctaaatttatacccttatcttgctcttgtagattgatcggtataaatatataactaggtcaatt |
218 |
Q |
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| T |
7801651 |
tttttgtcaatcaattcatttctgagttttgttatgctaaatttatacccttatcttgctcttgtagattgatcggtataaatatataactaggtcaatt |
7801750 |
T |
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| Q |
219 |
ggtagtagaggaaacctaagtagttgttagtttcaattcaattagtgatattttggagtttgatatgcttttcagtttttcaattcactcaatctcaatt |
318 |
Q |
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| T |
7801751 |
ggtagtagaggaaacctaagtagttgttagtttcaattcaattagtgatattttggagtttgatatgcttttcagtttttcaattcactcaatctcaatt |
7801850 |
T |
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| Q |
319 |
ttcgttgtgttatgttggtgctcaatctgttttgttgtgttggcgttaaatcttttcattctcagtaatgttgtctttgtgctggtgttcatctcact |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7801851 |
ttcgttgtgttatgttggtgctcaatctgttttgttgtgttggcgttaaatcttttcattctcagtaatgttgtctttgtgctggtgttcatctcact |
7801948 |
T |
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