View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4664-Insertion-4 (Length: 838)
Name: NF4664-Insertion-4
Description: NF4664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4664-Insertion-4 |
 | |
|
| [»] scaffold0428 (3 HSPs) |
| |
|
| [»] scaffold1408 (2 HSPs) |
| | |
|
| [»] scaffold1749 (1 HSPs) |
| |
|
Alignment Details
Target: chr6 (Bit Score: 394; Significance: 0; HSPs: 39)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 7 - 420
Target Start/End: Original strand, 33359347 - 33359760
Alignment:
| Q |
7 |
acttagatccaatgttctcaaattgggaagatactgtgacatgaaaaccaacaaaaatagagcattgctttgattaaaagataattgttttcaattggtt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
33359347 |
acttagatccaatgttctcaaattgggaagatactgtgacatgaaaaccaacaaaactagagcattgctttgattaaaagataattattttcaattggtt |
33359446 |
T |
|
| Q |
107 |
tatatttctaaaataaacattaataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
33359447 |
tatatttctaaaataaacattaataataagagaatttatattaccttcttgtttttccatagttgtttaatgctgcttttcttcaagatcaattctacaa |
33359546 |
T |
|
| Q |
207 |
gttcattggggttaaaacttgttggcaaatactggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagactcgttgggcttcttgagat |
306 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33359547 |
gttcattggagttaaaacttgttggcaaatactggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagactcgttgggcttcttgagat |
33359646 |
T |
|
| Q |
307 |
atatgcattgatgatgagcactctaagattactcatttttgacaagtgttcaaagtccaccatcttttcatgaatcaaaactatggcttcaacatgtttt |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33359647 |
atatgcattgatgatgagcactctaagattactcatttttgacaagtgttcaaagtccaccatcttttcatgaatcaaaactatggcttcaacatgtttt |
33359746 |
T |
|
| Q |
407 |
tcctaaagtattgc |
420 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
33359747 |
tcctaaagtattgc |
33359760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 500 - 838
Target Start/End: Original strand, 33359843 - 33360180
Alignment:
| Q |
500 |
ctatatttctaaacagctactttaccatattctccttcataacattgcaaatttgtttatgggaccacaacctgaatcagaagggctctttcatgacaaa |
599 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
33359843 |
ctatatttctaaacagctactttaccatattctccttcataacattgcaaatttgtttatgggaccacaacctgaatcaaaagggctctttcatgacata |
33359942 |
T |
|
| Q |
600 |
gcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaataggattttcttttgtgcatcgagtgg |
699 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33359943 |
gcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaataggattttcttttgtgcatcgagtgg |
33360042 |
T |
|
| Q |
700 |
attatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttgggccatataaagtcgtagcaagggttgt |
799 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
33360043 |
attatcatgtagtctgtaaattttagttacatcatcaataaaaaaagatgcactaaattggtgagagattt-ggccatataaagtcgtagcaagggttgt |
33360141 |
T |
|
| Q |
800 |
tttcccaattcctccaattccacaaattcctatagcacg |
838 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33360142 |
tttcccaattcctccaattccacaaattcctatagcacg |
33360180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 7 - 414
Target Start/End: Original strand, 33263264 - 33263679
Alignment:
| Q |
7 |
acttagatccaatgttctcaaattgggaagatactgtgacatgaa-aaccaacaaaaatagagc-attgctttgattaaaagataattgttttcaattgg |
104 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||| ||||||||| |||| |||||||| |||| | |
|
|
| T |
33263264 |
acttagatccaatgttctcaaattgggcagatactgtgacatgaataaacaataaaaatagagccattactttgattataagagaattgtttcgaatttg |
33263363 |
T |
|
| Q |
105 |
tttatatttctaaaataa---acattaataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattc |
201 |
Q |
| |
|
|||||||||||| || | | |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||| |||| |||||||||||| |
|
|
| T |
33263364 |
gttatatttctaagatgatgaatattaataataagagaatttatagtaccttcttgtttttccatagttgtgtaatgttgcttttcaccaagatcaattc |
33263463 |
T |
|
| Q |
202 |
tacaagttcattggggttaaaacttgttggcaaatactggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagactcgttgggcttctt |
301 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||| |||||||| | ||||||| || | |||| ||| ||||||||||| ||||||||| | |
|
|
| T |
33263464 |
tacaagttcattggggtgaaaacttgatggcaaatactttgaaggatattcatcccactcaacatatctcaatttgtttgaaagacaacttgggcttcct |
33263563 |
T |
|
| Q |
302 |
gagatata---tgcat---tgatgatgagcactctaagattactcatttttgacaagtgttcaaagtccaccatcttttcatgaatcaaaactatggctt |
395 |
Q |
| |
|
|||||||| | | | |||||||||||| |||||||||||||||||||||||| ||||||| |||||| || ||||| | |||||||||||||| |
|
|
| T |
33263564 |
gagatatacattccgtacctgatgatgagcaatctaagattactcatttttgacaattgttcaacgtccac---ctcttcatcatccaaaactatggctt |
33263660 |
T |
|
| Q |
396 |
caacatgtttttcctaaag |
414 |
Q |
| |
|
||| || ||||||||||| |
|
|
| T |
33263661 |
taacttgcttttcctaaag |
33263679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 573 - 838
Target Start/End: Original strand, 33059400 - 33059664
Alignment:
| Q |
573 |
gaatcagaagggctctttcatgacaaagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaa |
672 |
Q |
| |
|
|||||| ||||| |||||||||||| ||| |||||||||||||||||||||||||||||| || |||||||| | ||||||||||| |||||||||||| |
|
|
| T |
33059400 |
gaatcataagggttctttcatgacatagcttcctttgtatcaaagtagttgcatggtaacgattgcatatttgttggtgttctatgccgagagtttgaaa |
33059499 |
T |
|
| Q |
673 |
taggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttgg |
772 |
Q |
| |
|
|||||||| |||||| |||||||||||| |||||||| || |||||||| |||||||| ||||| |||||||||||||| ||||| |||| | |
|
|
| T |
33059500 |
taggatttgtttttgtacatcgagtggatcatcatgtaatccataaattttggttacatcgtcaataaaacaagatgcactaaattgatgagatattt-g |
33059598 |
T |
|
| Q |
773 |
gccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcacg |
838 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
33059599 |
gccatataaagtcgtagcaagggttgttttccctattcctcccattccacaaattcctatagcacg |
33059664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 33058195 - 33058438
Alignment:
| Q |
10 |
tagatccaatgttctcaaattgggaagatactgtgacatgaaaa-ccaacaaaaatagagcattgctttgattaaaagataattgttttcaattggttta |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| |||| |||||||| |||| ||||||||| |||| ||||| |
|
|
| T |
33058195 |
tagatccaatgttctcaaattgggaagatactgtgacgtgaaaaaccaacaaagttagc-cattactttgattgtaagagaattgttttgaatttgttta |
33058293 |
T |
|
| Q |
109 |
tatttctaaaat---aaacattaataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctaca |
205 |
Q |
| |
|
||||||||| || ||| ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||| | | ||||||||||||||||| |
|
|
| T |
33058294 |
tatttctaagatgataaatattaataataatagaatttatagtaccttcttgtttttccatagttgtttaatgttgctctccgtcaagatcaattctaca |
33058393 |
T |
|
| Q |
206 |
agttcattggggttaaaacttgttggcaaatactggcaaggatat |
250 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||| | |||||||| |
|
|
| T |
33058394 |
agttcattggggtgaaaatttgatggcaaatacttggaaggatat |
33058438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 31562266 - 31562021
Alignment:
| Q |
7 |
acttagatccaatgttctcaaattgggaagatactgtgacatgaaaaccaa-caaaaatagagc-attgctttgattaaaagataattgttttcaattgg |
104 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||||||||| |||| ||| |||||||||||| ||| ||||||||||||||||||||||| |||| | |
|
|
| T |
31562266 |
acttagatccaattttcttaaattgggaagatactgtgacataaaaaacaaacaaaaatagagccattactttgattaaaagataattgtttctaatttg |
31562167 |
T |
|
| Q |
105 |
tttatatttctaaaataaacattaataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctac |
204 |
Q |
| |
|
|||||| |||||| |||| | ||||||||||| |||||| | ||||||||||||| ||| |||||| ||||||||| | || ||||||||||||||| |
|
|
| T |
31562166 |
tttatagttctaagataattagtaataataagataatttacagtaccttcttgtttgtccatagttgcgtaatgctgcttctcgccaagatcaattctac |
31562067 |
T |
|
| Q |
205 |
aagttcattggggttaaaacttgttggcaaatactggcaaggatat |
250 |
Q |
| |
|
|||||||| ||||| |||||||| ||||||||||| | |||||||| |
|
|
| T |
31562066 |
aagttcataggggtgaaaacttgatggcaaatacttgaaaggatat |
31562021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 10 - 420
Target Start/End: Original strand, 33286178 - 33286599
Alignment:
| Q |
10 |
tagatccaatgttctcaaattgggaagatactgtgacatgaaaaccaa-caaaaatagagc-attgctttgattaaaagataattgttttcaattggttt |
107 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| | ||||||| ||| ||||||| |||| ||| ||||||| |||| |||||||| |||| |||| |
|
|
| T |
33286178 |
tagatccaatcccctcaaattgggaagatactgtaatatgaaaaacaaacaaaaatggagccattaatttgattttaagagaattgtttcaaatttgttt |
33286277 |
T |
|
| Q |
108 |
atatttctaaaataaacattaataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaag |
207 |
Q |
| |
|
|||||||||| || |||||| ||||||||| |||||||| ||||||||| ||| ||| ||||||||||||| ||| | | |||||||||||||||||| |
|
|
| T |
33286278 |
atatttctaagatgaacatttataataagataatttatagtaccttcttctttctccatagttgtttaatgttgctactatgcaagatcaattctacaag |
33286377 |
T |
|
| Q |
208 |
ttcattggggttaaaacttgttggcaaatactggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagactcgttgggcttcttgagata |
307 |
Q |
| |
|
||||||||||| |||| ||| ||||||||| | | |||||||| | |||||||| | |||||||| ||||||||||||| | |||||| |||||| |
|
|
| T |
33286378 |
ttcattggggtgaaaatttgatggcaaatatttgaaaggatatccagtccactgaacatatcttaatttgtttgaaagactcaataggcttccggagata |
33286477 |
T |
|
| Q |
308 |
tatgca------ttgatgatgagcactctaagattactcatttttgacaagtgttcaaagtcca---ccatcttttcatgaatcaaaactatggcttcaa |
398 |
Q |
| |
|
| || |||||||||||| |||||||||||||||||||||||||||||||| | || | | || ||||| | ||||||||| ||||| || |
|
|
| T |
33286478 |
ttcacaccccacatgatgatgagcaatctaagattactcatttttgacaagtgttcaacattcaatccaacctcttcatcattcaaaactaaggctttaa |
33286577 |
T |
|
| Q |
399 |
catgtttttcctaaagtattgc |
420 |
Q |
| |
|
|||| ||||||||||| ||||| |
|
|
| T |
33286578 |
catgcttttcctaaagcattgc |
33286599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 33305114 - 33305347
Alignment:
| Q |
8 |
cttagatccaa-tgttctcaaattgggaagatactgtgacatg-aaaaccaacaaaaatagagca-ttgctttgattaaaagataattgttttcaattgg |
104 |
Q |
| |
|
||||||||||| |||| |||||||||| |||||||| |||||| ||||| |||||||||| | || || |||||| || |||||||||||| | || | |
|
|
| T |
33305114 |
cttagatccaaatgtt-tcaaattgggcagatactgggacatgtaaaacaaacaaaaatacaccaattactttgactatgagataattgtttcaattttg |
33305212 |
T |
|
| Q |
105 |
tttatatttctaaaataaacattaataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctac |
204 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||| ||| |||| |||||||||||||| |
|
|
| T |
33305213 |
tttatatttctaagataaacattaataataagagaatttatagtaccttcttgtttgtccatagttgttcaattttgctgctctttaagatcaattctac |
33305312 |
T |
|
| Q |
205 |
aagttcattggggttaaaacttgttggcaaatact |
239 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||| |
|
|
| T |
33305313 |
aagttcattggggtgaaaatttgatggcaaatact |
33305347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 7 - 359
Target Start/End: Original strand, 33272433 - 33272789
Alignment:
| Q |
7 |
acttagatccaatgttctcaaattgggaagatactgtgacatgaaaacc-aacaaaaatagagc-attgctttgattaaaagataattgttttcaattgg |
104 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||| ||||||||| |||||||||||| | ||| | |||||| |||| |||||||| |||| | |
|
|
| T |
33272433 |
acttagacccaatcttctcaaattgggaagatactg--acatgaaaaaataacaaaaatagaaccattacattgattctaagagaattgtttcaaatttg |
33272530 |
T |
|
| Q |
105 |
tttatatttctaaaataaacattaataataagagaatttatat-taccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattcta |
203 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||| || ||| ||||||||||||||| |
|
|
| T |
33272531 |
tttatatttctaagataaacattaataata---gaatttataggtaccttcttgtttttccatagttgtttgatgtcgctattcatcaagatcaattcta |
33272627 |
T |
|
| Q |
204 |
caagttcattggggttaaaacttgttggcaaatactggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagactcgttgggcttcttga |
303 |
Q |
| |
|
||| |||||||||| |||||||||||| | | ||| | |||||||| | ||||||| || | |||||||||| |||||||| |||| | | || | || |
|
|
| T |
33272628 |
taaggtcattggggtgaaaacttgttggtagacacttgaaaggatatccatcccactcaacatatcttaatgcatttgaaaggctcgatagactacctgg |
33272727 |
T |
|
| Q |
304 |
gatat-----atgca-ttgatgatgagcactctaagattactcatttttgacaagtgttcaa |
359 |
Q |
| |
|
||||| ||| ||||| ||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
33272728 |
gatattccgaccgcacttgattatgagcaatctaagattactcatttttgccaagtgttcaa |
33272789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 637 - 838
Target Start/End: Complemental strand, 33642781 - 33642581
Alignment:
| Q |
637 |
gcatattttattgtgttctatgctgagagtttgaaataggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatca |
736 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| |||||||| ||||||||||| |
|
|
| T |
33642781 |
gcatatttgatggtgttctatgccaagagtttgaaataggatttgcttttgtgcttcgagtggaccatcatgtaatctataaattttgcttacatcatca |
33642682 |
T |
|
| Q |
737 |
atnnnnnnngatgcactaaattggtgagagatttgggccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagca |
836 |
Q |
| |
|
|| |||||||||||| | ||||| |||| || ||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
33642681 |
ataaaacatgatgcactaaatcgatgagatattt-ggtcatataaagccgtagcaagggttgtcttccctattcctcccattccacaaattcctatagca |
33642583 |
T |
|
| Q |
837 |
cg |
838 |
Q |
| |
|
|| |
|
|
| T |
33642582 |
cg |
33642581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 42 - 288
Target Start/End: Original strand, 9167431 - 9167679
Alignment:
| Q |
42 |
gtgacatgaaaa-ccaacaaaaatagagc-attgctttgattaaaagataattgttttcaattggtttatatttctaaaataaacattaataataagaga |
139 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||| |||||||| |||| |||||||| |||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9167431 |
gtgacatgaaaaaccaacaaaaatagagccattactttgattgtaagaaaattgtttcgaatttgtttatatttctaaaataaacggtaataataagaga |
9167530 |
T |
|
| Q |
140 |
atttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaagttcattggggttaaaacttgttggcaaatact |
239 |
Q |
| |
|
|||||| |||||| |||||||||| ||||||||||||| ||| |||||||||| || |||||||||||||| || |||||| | ||||||||||| |
|
|
| T |
9167531 |
gtttatagtacctttttgtttttccatagttgtttaatgttgctccagttcaagatcagttgtacaagttcattggcgtgaaaactcgatggcaaatact |
9167630 |
T |
|
| Q |
240 |
ggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagact |
288 |
Q |
| |
|
| |||||||| | ||||| || | |||||||| |||| |||||||| |
|
|
| T |
9167631 |
tgaaaggatatcgataccactcaagatatcttaattcgttcgaaagact |
9167679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 128 - 420
Target Start/End: Original strand, 33401373 - 33401671
Alignment:
| Q |
128 |
aataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaagttcattggggttaaaacttg |
227 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
33401373 |
aataataagagaatttatagtaccttcttgtttttccatagttgtttaatgttgctacaccacaagatcaattctacaagttcattggggtgaaaacttg |
33401472 |
T |
|
| Q |
228 |
ttggcaaatactggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagactcgttgggcttcttgagatat-----atgca-ttgatgat |
321 |
Q |
| |
|
|||||||||||| | |||||||| | | ||| | || | |||||||| ||||||||||| ||| || || |||||||| |||| |||||||| |
|
|
| T |
33401473 |
ttggcaaatacttgaaaggatattcatgccaatcaacatatcttaattcgtttgaaagaaaatttgagcctcctgagatattccaattgcacttgatgat |
33401572 |
T |
|
| Q |
322 |
gagcactctaagattactcatttttgacaagtgttcaaagtccaccatctt-ttcatgaatcaaaactatggcttcaacatgtttttcctaaagtattgc |
420 |
Q |
| |
|
||| | ||||||||||||||||||||| |||||||||| |||||| |||| | | | |||||| |||||||||||||| ||||||||||| ||||| |
|
|
| T |
33401573 |
gagaagtctaagattactcatttttgataagtgttcaacatccacc-tcttcattacgtttcaaaagtatggcttcaacattcttttcctaaagcattgc |
33401671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 573 - 838
Target Start/End: Original strand, 33273629 - 33273893
Alignment:
| Q |
573 |
gaatcagaagggctctttcatgacaaagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaa |
672 |
Q |
| |
|
||||||||||| | |||||| |||| ||||| ||| |||||||| ||||| | |||| || |||||||| || ||||||||||| ||||||||||| |
|
|
| T |
33273629 |
gaatcagaaggaccctttcacgacatagcctacttcgtatcaaattagttacgctgtaatgattgcatatttgatggtgttctatgccgagagtttgaag |
33273728 |
T |
|
| Q |
673 |
taggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttgg |
772 |
Q |
| |
|
|||||||| ||||||||||||||| ||| |||||||| | | |||||||| |||||||||| || |||||||||||| | ||||| |||| | |
|
|
| T |
33273729 |
taggatttgcttttgtgcatcgaggggaccatcatgtaatttataaattttgcttacatcatctataaaacaggatgcactaaatcgatgagatattt-g |
33273827 |
T |
|
| Q |
773 |
gccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcacg |
838 |
Q |
| |
|
||||||||| | ||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
33273828 |
atcatataaagccatagcaagggttgtcttccctattcctcccattccacaaattcctatagcacg |
33273893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 573 - 837
Target Start/End: Original strand, 33306323 - 33306586
Alignment:
| Q |
573 |
gaatcagaagggctctttcatgacaaagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaa |
672 |
Q |
| |
|
||||||||||| | ||||| ||| ||||| | | |||||||| |||||| | ||||| || || |||| || ||||||||||| ||||||||||| |
|
|
| T |
33306323 |
gaatcagaaggaccttttcacgacgtagcctacgtcgtatcaaatcagttgcgttgtaacgattgcttattagatggtgttctatgcctagagtttgaaa |
33306422 |
T |
|
| Q |
673 |
taggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttgg |
772 |
Q |
| |
|
|||||||| ||||||||||| ||||||| |||||||| || |||||||| |||||||||||||| |||||||||||| | ||||| |||| | |
|
|
| T |
33306423 |
taggatttgcttttgtgcattgagtggaccatcatgtaaactataaattttggttacatcatcaatatagcaggatgcactaaatcgatgagatattt-g |
33306521 |
T |
|
| Q |
773 |
gccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcac |
837 |
Q |
| |
|
| ||||||||| | ||||||||||||| ||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
33306522 |
gtcatataaagccatagcaagggttgtcttccctattcctcccattccagaaattcctatagcac |
33306586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 99 - 420
Target Start/End: Original strand, 33388768 - 33389098
Alignment:
| Q |
99 |
aattggtttatatttctaaaataaacattaataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaa |
198 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||| | ||| |||| |||||||||||| |||| ||||||||| ||| || | | |||||||||| |
|
|
| T |
33388768 |
aatttgtttatatttctaagataaacattaataatca---aatgtataataccttcttgttcttccatagttgtttgatgtcgctatacatcaagatcaa |
33388864 |
T |
|
| Q |
199 |
ttctacaagttcattggggttaaaacttgttggcaaatactggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagactcgttgggctt |
298 |
Q |
| |
|
|||||||| ||| |||||| |||||||| ||||||||||| | ||||||| | ||||| || | ||||||||| |||||||||||||| |||||| |
|
|
| T |
33388865 |
ctctacaagatcactggggtgaaaacttgatggcaaatacttgaaaggataataattccactcaacatatcttaatgtgtttgaaagactcgatgggcta |
33388964 |
T |
|
| Q |
299 |
cttgagatatatgca------ttgatgatgagcactctaagattactcatttttgacaagtgttcaaagtccaccatctt-------ttcatgaatcaaa |
385 |
Q |
| |
|
|||| ||||| | | ||||||||||| | |||||||||||||||||||||||| ||||||| ||||||| |||| |||| | ||||| |
|
|
| T |
33388965 |
cttgggatattcggaccccacttgatgatgagtaatctaagattactcatttttgacaactgttcaacgtccacc-tcttcaacatcatcatcattcaaa |
33389063 |
T |
|
| Q |
386 |
actatggcttcaacatgtttttcctaaagtattgc |
420 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||| |
|
|
| T |
33389064 |
actatggcttcaacatgcctttcctaaagcattgc |
33389098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 574 - 838
Target Start/End: Original strand, 33402452 - 33402715
Alignment:
| Q |
574 |
aatcagaagggctctttcatgacaaagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaat |
673 |
Q |
| |
|
||||||||| || ||||| ||| ||||| | |||||||||| | ||||| ||||| || |||||||| || ||||||||||| |||||||||| | |
|
|
| T |
33402452 |
aatcagaagagccttttcacgacgtagcctacgttgtatcaaatcaattgcactgtaacgattgcatatttgatggtgttctatgccgagagtttgatgt |
33402551 |
T |
|
| Q |
674 |
aggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttggg |
773 |
Q |
| |
|
||||||| |||||||||||| | ||| ||||| || ||| |||||||| ||||||||||||| |||||||||||| | |||||||||||| |
|
|
| T |
33402552 |
aggatttgcttttgtgcatcaattgggccatcatataatctataaattttgcttacatcatcaatgaaacaggatgcactaaatcgatgagagatttgg- |
33402650 |
T |
|
| Q |
774 |
ccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcacg |
838 |
Q |
| |
|
||||||||| || ||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| |
|
|
| T |
33402651 |
ccatataaattcatagcaagggttgtcttccctattcctcccattccacaaattcttatagcacg |
33402715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 573 - 838
Target Start/End: Complemental strand, 31561052 - 31560788
Alignment:
| Q |
573 |
gaatcagaagggctctttcatgacaaagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaa |
672 |
Q |
| |
|
||||||||||||| ||||||||||| || | || | |||||| ||||||| |||| || |||||||| |||||||||||||| || |||||||| |
|
|
| T |
31561052 |
gaatcagaagggccctttcatgacatagatttattcgcatcaaattagttgcgctgtaatgattgcatatttgattgtgttctatgccgacagtttgaag |
31560953 |
T |
|
| Q |
673 |
taggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttgg |
772 |
Q |
| |
|
|||||||| ||||||||||||||| ||| |||| | ||| |||||||| ||||||||||||| |||||||||||| | ||||| |||| | |
|
|
| T |
31560952 |
taggatttgcttttgtgcatcgaggggaccatcacctgatctataaattttgcttacatcatcaataaaacaggatgcactaaatcgatgagatattt-g |
31560854 |
T |
|
| Q |
773 |
gccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcacg |
838 |
Q |
| |
|
|||||| |||||| ||||||||| ||| ||||| |||||||| |||||||||||||||||| |||| |
|
|
| T |
31560853 |
gccatacaaagtcatagcaagggctgtcttccctattcctcccattccacaaattcctataacacg |
31560788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 573 - 838
Target Start/End: Complemental strand, 31567371 - 31567107
Alignment:
| Q |
573 |
gaatcagaagggctctttcatgacaaagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaa |
672 |
Q |
| |
|
||||||||||||| |||||| |||| ||||| ||| |||||||| |||| || |||| || |||||||| | ||| ||||||| | |||||||| |
|
|
| T |
31567371 |
gaatcagaagggccctttcacgacatagccttcttcgtatcaaattagtggcgctgtaatgattgcatatttgttggtgatctatgccaacagtttgaag |
31567272 |
T |
|
| Q |
673 |
taggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttgg |
772 |
Q |
| |
|
|||||||| ||||||||||||||| ||| ||||| | ||| |||||||| ||||||||||||| |||||||||||| | ||||| |||||| |
|
|
| T |
31567271 |
taggatttgcttttgtgcatcgaggggaccatcatatgatctataaattttgcttacatcatcaatataacaagatgcactaaatcgatgagatatttgg |
31567172 |
T |
|
| Q |
773 |
gccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcacg |
838 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
31567171 |
-ccatataaagtctcagcaagggctgtcttccctattccccccattccacaaattcctatagcacg |
31567107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 574 - 837
Target Start/End: Original strand, 33411791 - 33412053
Alignment:
| Q |
574 |
aatcagaagggctctttcatgacaaagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaat |
673 |
Q |
| |
|
|||||||||||| ||||||||| | ||| | | |||||||| ||||||| ||||| || |||||||| || ||||||||||| || |||||||| | |
|
|
| T |
33411791 |
aatcagaagggccttttcatgacgtaacctacgtcgtatcaaatcagttgcactgtaacgattgcatatttgatggtgttctatgccgacagtttgaagt |
33411890 |
T |
|
| Q |
674 |
aggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttggg |
773 |
Q |
| |
|
||||||| | ||||||||||||| ||| ||||| || ||| |||||||| ||||||| || || |||||||||||||| ||||| || ||| |
|
|
| T |
33411891 |
aggatttgcctttgtgcatcgaggggaccatcatataatctataaattttgcttacatcgtctataaaacaagatgcactaaattgatgagatatctgg- |
33411989 |
T |
|
| Q |
774 |
ccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcac |
837 |
Q |
| |
|
|||||||||||| ||||||||||||| || || ||||| || |||||||||||||| ||||||| |
|
|
| T |
33411990 |
ccatataaagtcatagcaagggttgtctttcctattccgcccattccacaaattccaatagcac |
33412053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 637 - 838
Target Start/End: Original strand, 9168675 - 9168875
Alignment:
| Q |
637 |
gcatattttattgtgttctatgctgagagtttgaaataggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatca |
736 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||||| || ||||| |||||||||||||||||| |||||| | ||| ||||||||| ||| ||||||| |
|
|
| T |
9168675 |
gcatatttgatggtgttctatgccgagagtttgaagtaagatttgcttttgtgcatcgagtgggccatcatgcaatctataaattttacttatatcatca |
9168774 |
T |
|
| Q |
737 |
atnnnnnnngatgcactaaattggtgagagatttgggccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagca |
836 |
Q |
| |
|
|| |||||||||||| | ||||| |||| || |||||||| | | ||||| ||||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
9168775 |
ataaaacaggatgcactaaatcgatgagatattt-ggtcatataaaaccattgcaagagttgtcttccctattcctcccattccacaaattcctatagca |
9168873 |
T |
|
| Q |
837 |
cg |
838 |
Q |
| |
|
|| |
|
|
| T |
9168874 |
cg |
9168875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 637 - 838
Target Start/End: Original strand, 33264550 - 33264750
Alignment:
| Q |
637 |
gcatattttattgtgttctatgctgagagtttgaaataggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatca |
736 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||| |||||||| |||||||||||| | |||| |||||||| ||| ||||||| ||||||||||| |
|
|
| T |
33264550 |
gcatatttgatggtgttctatgccaagagtttgatgtaggatttgcttttgtgcatctattggaccatcatgtaatctaaaaattttgcttacatcatca |
33264649 |
T |
|
| Q |
737 |
atnnnnnnngatgcactaaattggtgagagatttgggccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagca |
836 |
Q |
| |
|
|| |||||| |||| | ||| |||||| ||||||||||| || ||||||||||||| ||||| |||||||| || || ||||||||||||||| |
|
|
| T |
33264650 |
atgaaacaggatgcatcaaatcgatgacagattt-ggccatataaattcatagcaagggttgtcttccctattcctcccatcccccaaattcctatagca |
33264748 |
T |
|
| Q |
837 |
cg |
838 |
Q |
| |
|
|| |
|
|
| T |
33264749 |
cg |
33264750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 33643935 - 33643832
Alignment:
| Q |
132 |
ataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaagttcattggggttaaaacttgttgg |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||| |||||||||||||| |||||| | |||| ||| ||| |
|
|
| T |
33643935 |
ataagagaatttatattaccttcttgtttttccatagttgtctaatgttgctcttcttcaagaacaattctacaagttgattgggctgaaaatttgatgg |
33643836 |
T |
|
| Q |
232 |
caaa |
235 |
Q |
| |
|
|||| |
|
|
| T |
33643835 |
caaa |
33643832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 33410588 - 33410790
Alignment:
| Q |
6 |
cacttagatccaatgttctcaaattgggaagatactgtgacatgaaaa-ccaacaaaaatagag-cattgctttgattaaaagataattgttttcaattg |
103 |
Q |
| |
|
||||||||||||||| | |||||||||||| ||||||||||||||||| | ||||||||||||| |||| ||||||||| || | ||||||||| |||| |
|
|
| T |
33410588 |
cacttagatccaatgctttcaaattgggaaaatactgtgacatgaaaagcaaacaaaaatagagacattactttgattataacagaattgttttgaattt |
33410687 |
T |
|
| Q |
104 |
gtttatatttctaaaataaacattaataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattcta |
203 |
Q |
| |
|
|||||||| |||| |||||||||| |||||||||| |||||| ||||||||| | ||||| ||||||||||||||||| | |
|
|
| T |
33410688 |
gtttatatctcta--------------------agaatttatagtaccttcttgcttttccatagttgtttgaagctgctattcttcaagatcaattcaa |
33410767 |
T |
|
| Q |
204 |
caagttcattggggttaaaactt |
226 |
Q |
| |
|
|||||||||| |||| ||||||| |
|
|
| T |
33410768 |
caagttcattagggtgaaaactt |
33410790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 609 - 836
Target Start/End: Original strand, 33389945 - 33390171
Alignment:
| Q |
609 |
gtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaataggattttcttttgtgcatcgagtggattatcatg |
708 |
Q |
| |
|
|||||||| ||||||| ||||| || |||||||| || ||||| |||| ||||||||||||||| |||| |||||||||||| | ||| |||| |
|
|
| T |
33389945 |
gtatcaaatcagttgcaatgtaacgattgcatatttgatggtgttttatgtcgagagtttgaaatagaatttgcttttgtgcatccaaaggaccatcaca |
33390044 |
T |
|
| Q |
709 |
tagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttgggccatataaagtcgtagcaagggttgttttcccaat |
808 |
Q |
| |
|
|| ||| || ||||| ||||||||||||| |||||||||| | ||||| |||||| | |||||||||| | ||||||||||| ||||| || |
|
|
| T |
33390045 |
taatctatatattttgcttacatcatcaataaaacaatttgcactaaatcgatgagatatttggtc-atataaagtcatggcaagggttgtcttccctat |
33390143 |
T |
|
| Q |
809 |
tcctccaattccacaaattcctatagca |
836 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
33390144 |
tcctcccattccacaaattcctatagca |
33390171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 573 - 838
Target Start/End: Original strand, 33287379 - 33287643
Alignment:
| Q |
573 |
gaatcagaagggctctttcatgacaaagcctcctttgtatcaaagtagttgcatggtaacaatcgcatattttattgtgttctatgctgagagtttgaaa |
672 |
Q |
| |
|
|||| |||||||| |||||| ||| ||||| |||||||||||| |||||||| ||| || || |||||| | || || |||||| | || ||||||| |
|
|
| T |
33287379 |
gaataagaagggccctttcacgacgtagcctactttgtatcaaattagttgcacggtgacgattgcatatatgatggtcttctattccgacggtttgaag |
33287478 |
T |
|
| Q |
673 |
taggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatcaatnnnnnnngatgcactaaattggtgagagatttgg |
772 |
Q |
| |
|
|||||||| ||||||||||||||| ||| |||||||| ||| | |||| | ||||| ||||| ||| |||||||| | || || |||| | |
|
|
| T |
33287479 |
taggatttccttttgtgcatcgaggggaccatcatgtaatctaaattttttggcaacatcttcaataaaacaagatccactaaatcgatgggatattt-g |
33287577 |
T |
|
| Q |
773 |
gccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcacg |
838 |
Q |
| |
|
||||||||| | ||| ||||||||||||||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
33287578 |
atcatataaagccatagaaagggttgttttccctattcctcccattccacaaattcctattgcacg |
33287643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 573
Target Start/End: Complemental strand, 31561757 - 31561690
Alignment:
| Q |
506 |
ttctaaacagctactttaccatattctccttcataacattgcaaatttgtttatgggaccacaacctg |
573 |
Q |
| |
|
|||||||||| |||||||||| |||||| ||||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
31561757 |
ttctaaacagaaactttaccattttctccatcataacattgtagatttgttcatgggaccacaacctg |
31561690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 316 - 420
Target Start/End: Original strand, 33058513 - 33058623
Alignment:
| Q |
316 |
gatgatgagcactctaagattactcatttttgacaagtgttcaaagtccacc-----atcttttcatgaat-caaaactatggcttcaacatgtttttcc |
409 |
Q |
| |
|
||||| ||||| ||| ||||||||||||||||||||||||||||||||| || ||||| | ||| ||||||||||||||||||||| |||||| |
|
|
| T |
33058513 |
gatgaagagcaatctgagattactcatttttgacaagtgttcaaagtccgcctcttcatcttctttgtaatacaaaactatggcttcaacatgcttttcc |
33058612 |
T |
|
| Q |
410 |
taaagtattgc |
420 |
Q |
| |
|
||||| ||||| |
|
|
| T |
33058613 |
taaagcattgc |
33058623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 33399658 - 33399768
Alignment:
| Q |
9 |
ttagatccaatgttctcaaattgggaagatactgtgacatga-aaaccaacaaaaatagag-cattgctttgattaaaagataattgttttcaattggtt |
106 |
Q |
| |
|
||||||||||| ||| ||||||| |||||||||||||||||| || ||| ||||| |||| |||| ||||||||| || | |||||||| |||| ||| |
|
|
| T |
33399658 |
ttagatccaattttcgcaaattgcgaagatactgtgacatgattaaacaataaaaacagagacattactttgattataaaagaattgtttcgaatttgtt |
33399757 |
T |
|
| Q |
107 |
tatatttctaa |
117 |
Q |
| |
|
||||||||||| |
|
|
| T |
33399758 |
tatatttctaa |
33399768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 9167705 - 9167750
Alignment:
| Q |
314 |
ttgatgatgagcactctaagattactcatttttgacaagtgttcaa |
359 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
9167705 |
ttgatgatgagcaatctaagactactcatttttgacaagtgttcaa |
9167750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 33644046 - 33643986
Alignment:
| Q |
6 |
cacttagatccaatgttctcaaattgggaagatactgtgacatgaaaa-ccaacaaaaata |
65 |
Q |
| |
|
|||||| ||||||| |||||| |||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
33644046 |
cacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaata |
33643986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 316 - 359
Target Start/End: Original strand, 33410916 - 33410959
Alignment:
| Q |
316 |
gatgatgagcactctaagattactcatttttgacaagtgttcaa |
359 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
33410916 |
gatgatgagcaatctaagattactcatttttgaaaagtgttcaa |
33410959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 31561935 - 31561898
Alignment:
| Q |
315 |
tgatgatgagcactctaagattactcatttttgacaag |
352 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
31561935 |
tgatgatgagcaatctaagattactcatttttgacaag |
31561898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 33388700 - 33388758
Alignment:
| Q |
8 |
cttagatccaatgttctcaaattgggaagatactgtgacatg-aaaaccaacaaaaataga |
67 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||| |
|
|
| T |
33388700 |
cttagatccaatcttctcaaattgggaagatac--tgacatgaaaaaacaacaaaaataga |
33388758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 546
Target Start/End: Original strand, 33305616 - 33305658
Alignment:
| Q |
504 |
atttctaaacagctactttaccatattctccttcataacattg |
546 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
33305616 |
atttctaaacagttactttaccatattctccaccataacattg |
33305658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 542
Target Start/End: Original strand, 33411082 - 33411120
Alignment:
| Q |
504 |
atttctaaacagctactttaccatattctccttcataac |
542 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
33411082 |
atttctaaacagttactttaccatattctccatcataac |
33411120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 573
Target Start/End: Complemental strand, 33643556 - 33643486
Alignment:
| Q |
503 |
tatttctaaacagctactttaccatattctccttcataacattgcaaatttgtttatgggaccacaacctg |
573 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| ||| ||||||| | |||||||| | |||||||| |||| |
|
|
| T |
33643556 |
tatttttaaacagctgatttaccatattctccatcacaacattgtagatttgttttttggaccacagcctg |
33643486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 33643744 - 33643702
Alignment:
| Q |
317 |
atgatgagcactctaagattactcatttttgacaagtgttcaa |
359 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
33643744 |
atgatcagcaatctaagattactcatttttgacaagtattcaa |
33643702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 28869643 - 28869610
Alignment:
| Q |
7 |
acttagatccaatgttctcaaattgggaagatac |
40 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
28869643 |
acttagatgcaatgttctcaaattgggaagatac |
28869610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 572
Target Start/End: Original strand, 33263778 - 33263847
Alignment:
| Q |
503 |
tatttctaaacagctactttaccatattctccttcataacattgcaaatttgtttatgggaccacaacct |
572 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| || |||||||| | | |||||| |||||||||||| |
|
|
| T |
33263778 |
tatttctatatagctactttaccatattctccatcttaacattgtagaattgttttgcggaccacaacct |
33263847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 100; Significance: 5e-49; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 6 - 420
Target Start/End: Complemental strand, 17440275 - 17439856
Alignment:
| Q |
6 |
cacttagatccaatgttctcaaattgggaagatactgtgacatgaaaaccaacaaaaatagagc-attgctttgattaaaagataattgttttcaattgg |
104 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||| ||| | ||||||| |||| |||||||| |||| | |
|
|
| T |
17440275 |
cacttagatccaatcttctcaaattgggaagatactgtgacataaaaa------aaaatagagccattacattgattataagaaaattgtttcgaatttg |
17440182 |
T |
|
| Q |
105 |
tttatatttctaaaataaacattaat-aataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattcta |
203 |
Q |
| |
|
|||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||| ||| | ||||||| ||| | ||| |||||||||| |
|
|
| T |
17440181 |
tttatatttcaaagataaacattaattaataagagaatttatggtaccttcttgtttttccataggtttttaatgttgctcccatccaaaatcaattcta |
17440082 |
T |
|
| Q |
204 |
caagttcattggggttaaaacttgttggcaaatactggcaaggatatgcctcccactgaataaatcttaatgcgtttgaaagactcgttgggcttcttga |
303 |
Q |
| |
|
| ||||||||||||| |||||||||||||||||||| | |||||||| ||||| || | |||||||| ||| ||||||| ||||| || ||| |
|
|
| T |
17440081 |
ctagttcattggggtgaaaacttgttggcaaatacttgaaaggatatttaggccactcaacatatcttaatttgttcgaaagacaacttgggaatcctga |
17439982 |
T |
|
| Q |
304 |
gatatatgcatt---------gatgatgagcactctaagattactcatttttgacaagtgttcaaagtccaccatctt-ttcatgaatcaaaactatggc |
393 |
Q |
| |
|
|||| |||| | ||||||||||| |||||||||||||||||||||||| |||||| ||||||| |||| || ||||||||||||| |
|
|
| T |
17439981 |
gatagttgcagtatggttgacgatgatgagcaatctaagattactcatttttgacaaatgttcagcgtccacc-tcttcagtatatttcaaaactatggc |
17439883 |
T |
|
| Q |
394 |
ttcaacatgtttttcctaaagtattgc |
420 |
Q |
| |
|
||||||||| ||||||||||| ||||| |
|
|
| T |
17439882 |
ttcaacatgcttttcctaaagcattgc |
17439856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 628 - 838
Target Start/End: Complemental strand, 17439016 - 17438807
Alignment:
| Q |
628 |
gtaacaatcgcatattttattgtgttctatgctgagagtttgaaataggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagtt |
727 |
Q |
| |
|
||||| || |||||||| || ||||||||||| ||||||||||||| ||||| ||||||||| || |||||| |||||||| ||| |||||||| || |
|
|
| T |
17439016 |
gtaacgattgcatatttgatggtgttctatgccaagagtttgaaatatgatttgcttttgtgcttcaagtggaccatcatgtaatctataaattttgctt |
17438917 |
T |
|
| Q |
728 |
acatcatcaatnnnnnnngatgcactaaattggtgagagatttgggccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaatt |
827 |
Q |
| |
|
||||||||||| |||||| |||| | |||||||||| ||||||||||| | |||||||||||| ||||| |||||||| || || |||||| |
|
|
| T |
17438916 |
acatcatcaatgaaacaagatgcatcaaatcgatgagagattt-ggccatataaatccaaagcaagggttgtcttccctattcctcccatcccccaaatt |
17438818 |
T |
|
| Q |
828 |
cctatagcacg |
838 |
Q |
| |
|
||||||||||| |
|
|
| T |
17438817 |
cctatagcacg |
17438807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 637 - 838
Target Start/End: Original strand, 8661 - 8861
Alignment:
| Q |
637 |
gcatattttattgtgttctatgctgagagtttgaaataggattttcttttgtgcatcgagtggattatcatgtagtctgtaaattttagttacatcatca |
736 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||| |||||||| |||||||||||| | |||| |||||||| ||| ||||||| ||||||||||| |
|
|
| T |
8661 |
gcatatttgatggtgttctatgccaagagtttgatgtaggatttgcttttgtgcatcaattggaccatcatgtaatctaaaaattttgcttacatcatca |
8760 |
T |
|
| Q |
737 |
atnnnnnnngatgcactaaattggtgagagatttgggccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagca |
836 |
Q |
| |
|
|| |||||| |||| | ||| |||||| ||||||||||| || ||||||||||||| ||||| |||||||| || || |||||||||||| || |
|
|
| T |
8761 |
atgaaacaggatgcatcaaatcgatgacagattt-ggccatataaattcatagcaagggttgtcttccctattcctcccatcccccaaattcctataaca |
8859 |
T |
|
| Q |
837 |
cg |
838 |
Q |
| |
|
|| |
|
|
| T |
8860 |
cg |
8861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 7131 - 7249
Alignment:
| Q |
132 |
ataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaagttcattggggttaaaacttgttgg |
231 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||||||||||| || | || ||| |||||||||||||||||| |||| |||||||| ||| |
|
|
| T |
7131 |
ataagagaatttatagtaccttcttgtttttccatagttgtttaatgcagcttctcaccaaaatcaattctacaagttcagcagggtgaaaacttgatgg |
7230 |
T |
|
| Q |
232 |
caaatactggcaaggatat |
250 |
Q |
| |
|
|| ||||| | |||||||| |
|
|
| T |
7231 |
cagatacttgaaaggatat |
7249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 7027 - 7133
Alignment:
| Q |
6 |
cacttagatccaatgttctcaaattgggaagatactgtgacatg-aaaaccaacaaaaatagag-cattgctttgattaaaagataattgttttcaattg |
103 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| | |||| ||| |||| |||| |||| |||| |||| |
|
|
| T |
7027 |
cacttagatccaatcttctcaaattgggaagatgctgtgacatgaaaaaccaacaaaaatagggtcattacttcgattgtaagagaatttttttgaattt |
7126 |
T |
|
| Q |
104 |
gtttata |
110 |
Q |
| |
|
||||||| |
|
|
| T |
7127 |
gtttata |
7133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1408 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold1408
Description:
Target: scaffold1408; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 1385 - 1503
Alignment:
| Q |
132 |
ataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaagttcattggggttaaaacttgttgg |
231 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||||||||||| || | || ||| |||||||||||||||||| |||| |||||||| ||| |
|
|
| T |
1385 |
ataagagaatttatagtaccttcttgtttttccatagttgtttaatgcagcttctcaccaaaatcaattctacaagttcagcagggtgaaaacttgatgg |
1484 |
T |
|
| Q |
232 |
caaatactggcaaggatat |
250 |
Q |
| |
|
|| ||||| | |||||||| |
|
|
| T |
1485 |
cagatacttgaaaggatat |
1503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1408; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 1281 - 1387
Alignment:
| Q |
6 |
cacttagatccaatgttctcaaattgggaagatactgtgacatg-aaaaccaacaaaaatagag-cattgctttgattaaaagataattgttttcaattg |
103 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| | |||| ||| |||| |||| |||| |||| |||| |
|
|
| T |
1281 |
cacttagatccaatcttctcaaattgggaagatgctgtgacatgaaaaaccaacaaaaatagggtcattacttcgattgtaagagaatttttttgaattt |
1380 |
T |
|
| Q |
104 |
gtttata |
110 |
Q |
| |
|
||||||| |
|
|
| T |
1381 |
gtttata |
1387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 3e-16; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 31157992 - 31158108
Alignment:
| Q |
134 |
aagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaagttcattggggttaaaacttgttggca |
233 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| ||||||||| | ||||| | | ||| ||||||||| ||||||| |||||| | ||||| || ||||| |
|
|
| T |
31157992 |
aagagaatttatagtaccttcttgtctttccatagttgtttgacgctgctatgcctcatgatcaattcaacaagttgattgggctgaaaacatgctggca |
31158091 |
T |
|
| Q |
234 |
aatactggcaaggatat |
250 |
Q |
| |
|
|||||| | |||||||| |
|
|
| T |
31158092 |
aatacttgaaaggatat |
31158108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 31471958 - 31471897
Alignment:
| Q |
8 |
cttagatccaatgttctcaaattgggaagatactgtgacatg-aaaaccaacaaaaatagag |
68 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||||||| |
|
|
| T |
31471958 |
cttagatccaaatttctcaaattgggcagatactgtgacatgaaaaatcaacaaaaatagag |
31471897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 31478037 - 31477988
Alignment:
| Q |
371 |
ttttcatgaatcaaaactatggcttcaacatgtttttcctaaagtattgc |
420 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
31478037 |
ttttcatgattcaaaactatggcttcaacattcttttcctaaagcattgc |
31477988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 31498495 - 31498434
Alignment:
| Q |
8 |
cttagatccaatgttctcaaattgggaagatactgtgacatgaaa-accaacaaaaatagag |
68 |
Q |
| |
|
||||||||||| ||| ||||||| || |||||||||||||||||| |||||| ||||||||| |
|
|
| T |
31498495 |
cttagatccaaagttatcaaattcggcagatactgtgacatgaaagaccaaccaaaatagag |
31498434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 31149112 - 31149234
Alignment:
| Q |
128 |
aataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaagttcattggggttaaaacttg |
227 |
Q |
| |
|
||||| |||||||| |||| ||||||||| | ||||| ||| ||||| | |||| | | ||||||||||||| ||||||| ||| || |||||||| |
|
|
| T |
31149112 |
aataaaaagagaatgtatagtaccttcttatctttccatagctgtttgacactgctatacctcaagatcaattcgacaagttgattaggcagaaaacttg |
31149211 |
T |
|
| Q |
228 |
ttggcaaatactggcaaggatat |
250 |
Q |
| |
|
||||||||||| | |||||||| |
|
|
| T |
31149212 |
atggcaaatacttgaaaggatat |
31149234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 31503459 - 31503338
Alignment:
| Q |
129 |
ataataagagaatttatattaccttcttgtttttccgtagttgtttaatgctgcatttcttcaagatcaattctacaagttcattggggttaaaacttgt |
228 |
Q |
| |
|
||||| |||| ||||| | ||||||||||| || || || ||||| ||||||| ||||||||||||| || ||||||| ||| || | |||||||| |
|
|
| T |
31503459 |
ataattagaggatttagagtaccttcttgtcttcccataattgttcgatgctgctactcttcaagatcaactcaacaagttgatttggctgaaaacttga |
31503360 |
T |
|
| Q |
229 |
tggcaaatactggcaaggatat |
250 |
Q |
| |
|
|||||||||| | |||||||| |
|
|
| T |
31503359 |
cggcaaatacttgaaaggatat |
31503338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 31503608 - 31503563
Alignment:
| Q |
8 |
cttagatccaatgttctcaaattgggaagatactgtgacatgaaaa |
53 |
Q |
| |
|
||||||||||| ||||||||||| | ||||||||||||||||||| |
|
|
| T |
31503608 |
cttagatccaaatttctcaaattgcgcagatactgtgacatgaaaa |
31503563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 772 - 838
Target Start/End: Original strand, 34 - 100
Alignment:
| Q |
772 |
ggccatataaagtcgtagcaagggttgttttcccaattcctccaattccacaaattcctatagcacg |
838 |
Q |
| |
|
||||||||||| || ||||||||||||| ||||| |||||||| || || |||||||||||| |||| |
|
|
| T |
34 |
ggccatataaattcatagcaagggttgtcttccctattcctcccatcccccaaattcctataacacg |
100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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