View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4665_high_4 (Length: 228)
Name: NF4665_high_4
Description: NF4665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4665_high_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 11402352 - 11402573
Alignment:
| Q |
7 |
gaaaagtcaagtgaacttcaataatattaatgaatccaatcaaatgggagaggacatggaaacttcgatcaaaagagagaacaatttcaatccaaaaggt |
106 |
Q |
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| T |
11402352 |
gaaaagtcaagtgaacttcaataacattaatgaatccaatcaaatgggagaggacatgaaaacttcgatcaaaagagagaacaatttcaatccaaaaggt |
11402451 |
T |
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| Q |
107 |
ggaaacaattttggttctatcaactatatatggcaaaggaagaagttattacaaccaagagaggagaaattatgttttcaccgcgacaagtttgagcgca |
206 |
Q |
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| T |
11402452 |
ggaaacaattttggttctatcaattatatatggcaaaggaagaagttattacaaccaagagaggagaaattatgttttcaccgcgaaaagtttgagcgca |
11402551 |
T |
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| Q |
207 |
aagcagacgattgaagatataa |
228 |
Q |
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| T |
11402552 |
aagcagacgattgaagatataa |
11402573 |
T |
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