View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4667-Insertion-16 (Length: 296)
Name: NF4667-Insertion-16
Description: NF4667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4667-Insertion-16 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 49995811 - 49996044
Alignment:
| Q |
6 |
caaataacttataactactctatcaattttataaaaaatcaggtctacacacaacaaatacagtccattggagacaaataccttgtactctatttgggag |
105 |
Q |
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| T |
49995811 |
caaataacttataactactctatcaattttataaaaaatcaggtttacacacaacaaatacagtccattggagacaaataccttgtactctatttgggag |
49995910 |
T |
|
| Q |
106 |
gaactactgaggttgaatatcctttccacctaaaatatgaatattacaatgttaacaccaatatcaagtggcttataaaataaaatctcatctttacacc |
205 |
Q |
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| T |
49995911 |
gaactactgaggttgaataccctttccacctaaaatatgaatattacaatgttaacaccaatatcaagtggcttataaaataaaatctcatctttacacc |
49996010 |
T |
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| Q |
206 |
ttaaatacactttagcattaaactaaatagaact |
239 |
Q |
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|||||||||||||||||||| ||||||||||||| |
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| T |
49996011 |
ttaaatacactttagcattacactaaatagaact |
49996044 |
T |
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