View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4667-Insertion-17 (Length: 279)
Name: NF4667-Insertion-17
Description: NF4667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4667-Insertion-17 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 8 - 279
Target Start/End: Complemental strand, 3621991 - 3621720
Alignment:
| Q |
8 |
atcattaaaataagggaaatttgcatagaacacatcataatcttaagtgcaacactttacttaaaataaatacaagggaagttacatttgaaaactaggt |
107 |
Q |
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| T |
3621991 |
atcattaaaataagggaaatttgcatagaacacatcataatcttaagtgcaacactttttttaaaataaatacaagggaagttacatttgaaaactaggt |
3621892 |
T |
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| Q |
108 |
gtacaattcaatgtatttttcccccaaattaaattaatataaaaaagtagatagtgacatagatatattatagtacattaggaagacacaaacatcatag |
207 |
Q |
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||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
3621891 |
gtacaattcaatgtattttccccctaaattaaattaatataaaaaagtagatagtgacatagatatattatagtatattaggaagacacaaacatcataa |
3621792 |
T |
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| Q |
208 |
tagtttcatatgtttgtcaaactcagcataagtacaaaaagcatataatttgttatgagagcacacatgtga |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3621791 |
tagtttcatatgtttgtcaaactcagcataagtacaaaaagcatataatttgttatgagagcacacatgtga |
3621720 |
T |
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