View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4667_high_50 (Length: 234)
Name: NF4667_high_50
Description: NF4667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4667_high_50 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 1967499 - 1967716
Alignment:
| Q |
1 |
aacaaggtatttcaatatacatagaattttaaatataaattttcttgatattactaaccttccccaaaataattcccttgtatagtttgatgctttatta |
100 |
Q |
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| T |
1967499 |
aacaaggtatttcaatatacatagaattttaaatataaattttcttgatattactaaccttccccaaaataattcccttgtatagtttgatgctttatta |
1967598 |
T |
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| Q |
101 |
aaagtgtcgtgcaaattcatggatatttatttatttgttgatatgatcagaaaaaatacagaagctgttaaaggacatgggccagtaactgcttcaaggg |
200 |
Q |
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| T |
1967599 |
aaagtgtcgtgcaaattcatggatatttatttatttgttgatatgatcagaaaaaatacagaagctgttaaaggacatgggccagtaactgcttcaaggg |
1967698 |
T |
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| Q |
201 |
gagcaagaaataccaaag |
218 |
Q |
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|||||||||||||||||| |
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| T |
1967699 |
gagcaagaaataccaaag |
1967716 |
T |
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