View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4667_low_16 (Length: 374)
Name: NF4667_low_16
Description: NF4667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4667_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 365
Target Start/End: Complemental strand, 46557669 - 46557302
Alignment:
| Q |
1 |
ttataaggtgataatgatgataactttatattattctggaaagatctaggaatttctaacgatattctcctcccattcttcttcgtgatcaccttttata |
100 |
Q |
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| T |
46557669 |
ttataaggtgataatgatgataactttatattattctggaaagatctaggaatttctaacgatattctcctcccattcttcttcgtgatcaccttttata |
46557570 |
T |
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| Q |
101 |
taccaaaattaaccttaaagcct---tgttcttaattagtaacctcctctctttctctttctaaacatcgctcttgtttcttttcacttcccaatggaag |
197 |
Q |
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| T |
46557569 |
taccaaaattaaccttaaagcctccttgttcttaattagtaacctcctctctttctctttctaaacatcgctcttgtttcttttcacttcccaatggaag |
46557470 |
T |
|
| Q |
198 |
caacagaaacaagacccgaactagtagttgttcaagaagcaccaccacctctaccaccagaagaacaacaattacaacctctcatgtgcaaggtaaatca |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46557469 |
caacagaaacaagacccgaactagtagttgttcaagaagcaccaccacctctaccaccagaagaacaacaattacaacctctcatgtgcaaggtaaatca |
46557370 |
T |
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| Q |
298 |
aacattcattcattcctctgcatgcggttttaataactctcttttactacttctaacatacgtctctg |
365 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46557369 |
aacattcattcattcctctgcatgcggttttaataactctcttttactacttctaacatacgtctctg |
46557302 |
T |
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