View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4667_low_23 (Length: 337)
Name: NF4667_low_23
Description: NF4667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4667_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 320
Target Start/End: Original strand, 46557829 - 46558149
Alignment:
| Q |
18 |
atttcttcttttgccattcacaatcatccccagatatacctctt----gatgtgtaattttaaatatttgatatttatctattttataagaattttcgta |
113 |
Q |
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| T |
46557829 |
atttcttcttttgccattcacaatcatccccagatatacctcttaattgatgtggaattttaaatatttgatatttatctattttataagaatttttgta |
46557928 |
T |
|
| Q |
114 |
atgtggagcaaagatcaatatgtatttaaacattgatgtttaagaaaacaacacatgtgttttactcg--------------aaacattgtcttacttgt |
199 |
Q |
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| T |
46557929 |
atgtggagcaaaggtcaatatgtatttaaacattgatgtttaagaaaacaacacatgcgttttactcgaaacattgtcctccaaacattgtcttacttgt |
46558028 |
T |
|
| Q |
200 |
tgagttcaagtgcgagtgactaatctcgcatcaattacgaatgaattaaatgttgaatatgtaagaatggtaactcatataccatatgcattcatatttt |
299 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
46558029 |
tgagttcaagtgcgagtgacttatctcgcatcaattacgaatgaattaaatgttgaatatgtaagagtggtaactcatataccatatgcattcatatttt |
46558128 |
T |
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| Q |
300 |
ggattgagatgtggtgtcaaa |
320 |
Q |
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||||||||||||||||||||| |
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| T |
46558129 |
ggattgagatgtggtgtcaaa |
46558149 |
T |
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