View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4667_low_29 (Length: 304)
Name: NF4667_low_29
Description: NF4667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4667_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 29 - 296
Target Start/End: Complemental strand, 32082653 - 32082387
Alignment:
| Q |
29 |
cattaacattcatccatgcacattctttttatttattacgtatcaggtatcctcagcatgcaactgcaacataaaatatttttatatgatatgattttgn |
128 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||| |
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| T |
32082653 |
cattaacattcatccatgcacattctttttatttattacgtatcaggtatcctctgcatgcaactgcaacgtaaaatatctttatttgatatgattttgt |
32082554 |
T |
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| Q |
129 |
nnnnnngatcaggtttggagatgaggaatggtgatggattaaagatgccaaagttcgttgtaattggacatagaggaaacggtatgaatgtcttacaatc |
228 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32082553 |
ttttt-gatcaggtttggagatgagcaatggtgatggattaaagatgccaaagttcgttgtaattggacatagaggaaacggtatgaatgtcttacaatc |
32082455 |
T |
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| Q |
229 |
tacggatcggagaatgagagccatcaaagaaaactccattatgtcttttaatgctgcttcttcttttc |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32082454 |
tacggatcggagaatgagagccatcaaagaaaactccattatgtcttttaatgctgcttcttcttttc |
32082387 |
T |
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