View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4669-Insertion-10 (Length: 163)

Name: NF4669-Insertion-10
Description: NF4669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4669-Insertion-10
NF4669-Insertion-10
[»] chr7 (1 HSPs)
chr7 (8-114)||(6706502-6706608)


Alignment Details
Target: chr7 (Bit Score: 107; Significance: 6e-54; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 6e-54
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 6706608 - 6706502
Alignment:
8 gctaccatgttactattaataagtcttctctttgttcatcatgatcatgatattgttgatgatgtcaaatccctctaactcacaatataaactcaagatt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6706608 gctaccatgttactattaataagtcttctctttgttcatcatgatcatgatattgttgatgatgtcaaatccctctaactcacaatataaactcaagatt 6706509  T
108 caaaacc 114  Q
    |||||||    
6706508 caaaacc 6706502  T

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