View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4669-Insertion-4 (Length: 261)
Name: NF4669-Insertion-4
Description: NF4669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4669-Insertion-4 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 8 - 261
Target Start/End: Complemental strand, 39898348 - 39898095
Alignment:
| Q |
8 |
ccttgtatattctaaactcattaagcaaaatatacattttataacctcatactatttcctgcatataatctcttatgatccaaatggtgccacattatct |
107 |
Q |
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| T |
39898348 |
ccttatatattctaaactcattaagcaaaatatacattttataacctcataatatttcctgcatataatctcttatgatccaaatggtgccacattatct |
39898249 |
T |
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| Q |
108 |
tggtatgcctcatctaattcacttgttgatttttgttagttggagattcgattatatcttgtcattttcgactattccgaataaaactttttatctaaca |
207 |
Q |
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| T |
39898248 |
tcgtatgcctcatctaattcacttgttgatttttgttagttggagattcgattatatcttgtcattttcgactattccgaataaaactttttatctaaca |
39898149 |
T |
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| Q |
208 |
gcacctttcattgtggtcctgatgtggcaaactcatgtccctacctccaaatgc |
261 |
Q |
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| T |
39898148 |
gcacctttcattgtggtcctgatgtggcaaactcatgtccctacctcctaatgc |
39898095 |
T |
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