View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4669_high_7 (Length: 310)
Name: NF4669_high_7
Description: NF4669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4669_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 48693186 - 48692894
Alignment:
| Q |
1 |
ttatttatatccgatgatgtttgttgcactttctgtttctttcccaaaaagaaaaacatgttcaaccaatcatggaattgtggaaagagaaaatggatgt |
100 |
Q |
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| T |
48693186 |
ttatttatatccgatgatgtttgttgcactttctgtttctttcccaaaaagaaaaacatgttcaaccaatcatggaattgtggaaagagaaaatggatgt |
48693087 |
T |
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| Q |
101 |
ttgtggaaagaatgaagtttttaaatacagagaaagccattgctgttcccctcgcatttcaaagtgaacccacgggcctatagtaatattatcgtgtgag |
200 |
Q |
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| T |
48693086 |
ttgtggaaagaatgaattttttaaatacagagaaagccattgctgttcccctcgcatttcaaagtgaacccacggacctatagtaatattatcgtgtgag |
48692987 |
T |
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| Q |
201 |
ttttgttttttaacctcggaattagtagttcaccaattgaatggaaccttataagtaa--cacaatgcaattgtataaattatagcaacagatt |
292 |
Q |
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| T |
48692986 |
ttttgttttttaacctcggaattagttgttcaccaattgaatggaaccttataagtaacacacaatgcaattgtat-aattatagcaacagatt |
48692894 |
T |
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