View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4669_low_4 (Length: 436)

Name: NF4669_low_4
Description: NF4669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4669_low_4
NF4669_low_4
[»] chr3 (48 HSPs)
chr3 (124-426)||(2820514-2820816)
chr3 (124-426)||(2761168-2761470)
chr3 (124-426)||(2809221-2809523)
chr3 (19-123)||(10208426-10208530)
chr3 (19-123)||(10094494-10094598)
chr3 (19-123)||(10100517-10100621)
chr3 (19-123)||(10201380-10201484)
chr3 (19-123)||(47878577-47878681)
chr3 (33-123)||(16461853-16461943)
chr3 (19-123)||(29914380-29914484)
chr3 (19-123)||(29963533-29963637)
chr3 (40-123)||(22627612-22627695)
chr3 (42-123)||(54192897-54192978)
chr3 (19-123)||(10896655-10896759)
chr3 (40-123)||(5858197-5858280)
chr3 (19-123)||(10595437-10595541)
chr3 (42-122)||(54188160-54188240)
chr3 (58-123)||(10901398-10901463)
chr3 (129-417)||(2771019-2771307)
chr3 (40-123)||(51727460-51727543)
chr3 (40-125)||(43225825-43225910)
chr3 (40-123)||(4308735-4308818)
chr3 (40-123)||(35918403-35918486)
chr3 (42-123)||(10949729-10949810)
chr3 (129-417)||(2792273-2792561)
chr3 (19-107)||(10613205-10613293)
chr3 (40-123)||(20031798-20031882)
chr3 (40-123)||(9605067-9605150)
chr3 (40-122)||(29956218-29956300)
chr3 (40-122)||(30005373-30005455)
chr3 (42-123)||(27762476-27762557)
chr3 (56-123)||(11079169-11079236)
chr3 (48-123)||(25690818-25690893)
chr3 (40-123)||(27101714-27101797)
chr3 (129-255)||(2750954-2751080)
chr3 (42-123)||(47883331-47883412)
chr3 (129-417)||(2799320-2799608)
chr3 (75-123)||(27543946-27543994)
chr3 (40-123)||(4535262-4535345)
chr3 (126-247)||(2853874-2853995)
chr3 (22-71)||(6303015-6303064)
chr3 (75-123)||(6302984-6303032)
chr3 (78-123)||(43228032-43228077)
chr3 (22-68)||(27543980-27544026)
chr3 (48-123)||(45882659-45882734)
chr3 (123-175)||(2836736-2836788)
chr3 (363-415)||(2853706-2853758)
chr3 (44-120)||(38002494-38002570)
[»] chr8 (14 HSPs)
chr8 (19-123)||(4812914-4813018)
chr8 (19-123)||(25684296-25684400)
chr8 (24-123)||(28327561-28327660)
chr8 (24-123)||(28332284-28332383)
chr8 (22-123)||(16757675-16757776)
chr8 (19-123)||(590466-590570)
chr8 (22-123)||(16752951-16753052)
chr8 (40-123)||(29555234-29555317)
chr8 (40-123)||(9021555-9021638)
chr8 (22-123)||(28895153-28895254)
chr8 (40-120)||(3275955-3276035)
chr8 (44-123)||(21033520-21033599)
chr8 (40-123)||(23180008-23180091)
chr8 (40-124)||(22685122-22685206)
[»] chr7 (18 HSPs)
chr7 (19-123)||(7069433-7069537)
chr7 (19-123)||(7074440-7074544)
chr7 (24-123)||(25405046-25405145)
chr7 (19-117)||(3320475-3320573)
chr7 (19-117)||(3325223-3325321)
chr7 (19-123)||(7464925-7465029)
chr7 (19-123)||(8378845-8378949)
chr7 (40-124)||(34547290-34547374)
chr7 (40-123)||(30246642-30246725)
chr7 (40-124)||(44512974-44513058)
chr7 (42-117)||(25409809-25409884)
chr7 (42-124)||(25351004-25351086)
chr7 (42-124)||(25356698-25356780)
chr7 (40-121)||(40946076-40946157)
chr7 (42-123)||(44144357-44144438)
chr7 (77-124)||(2120591-2120638)
chr7 (77-124)||(48457440-48457487)
chr7 (75-123)||(3878322-3878370)
[»] chr6 (25 HSPs)
chr6 (19-123)||(13883128-13883232)
chr6 (19-123)||(31249139-31249243)
chr6 (19-123)||(35201751-35201855)
chr6 (19-124)||(26887650-26887755)
chr6 (19-123)||(30975124-30975228)
chr6 (19-123)||(30981563-30981667)
chr6 (19-123)||(30987727-30987831)
chr6 (24-123)||(35208991-35209090)
chr6 (22-123)||(16785572-16785673)
chr6 (22-123)||(13878380-13878481)
chr6 (19-110)||(25941330-25941421)
chr6 (40-123)||(17695299-17695382)
chr6 (19-123)||(25466327-25466431)
chr6 (40-123)||(1230684-1230767)
chr6 (40-123)||(26064756-26064839)
chr6 (40-123)||(26084725-26084808)
chr6 (45-123)||(28241782-28241860)
chr6 (40-124)||(26642828-26642912)
chr6 (40-124)||(26748794-26748878)
chr6 (45-119)||(22343257-22343331)
chr6 (42-123)||(13467955-13468036)
chr6 (77-123)||(33215499-33215545)
chr6 (48-123)||(15533145-15533220)
chr6 (40-123)||(22352303-22352386)
chr6 (75-123)||(14507668-14507716)
[»] chr4 (20 HSPs)
chr4 (19-123)||(11853202-11853306)
chr4 (40-125)||(16488999-16489084)
chr4 (19-123)||(31300074-31300178)
chr4 (40-123)||(15311994-15312077)
chr4 (40-123)||(15316630-15316713)
chr4 (40-123)||(18586616-18586699)
chr4 (19-123)||(40636868-40636972)
chr4 (40-119)||(15830817-15830896)
chr4 (40-124)||(8528917-8529001)
chr4 (40-123)||(4884531-4884614)
chr4 (40-124)||(8631879-8631963)
chr4 (40-123)||(6764654-6764737)
chr4 (49-123)||(4556511-4556585)
chr4 (45-123)||(47868195-47868273)
chr4 (40-121)||(2485310-2485390)
chr4 (44-123)||(16689394-16689472)
chr4 (42-123)||(25699401-25699482)
chr4 (43-123)||(7050722-7050802)
chr4 (71-123)||(26086240-26086292)
chr4 (91-123)||(4569723-4569755)
[»] chr2 (21 HSPs)
chr2 (24-123)||(2735858-2735957)
chr2 (24-123)||(2740594-2740693)
chr2 (24-123)||(39686636-39686735)
chr2 (19-123)||(45567062-45567166)
chr2 (24-123)||(39679698-39679797)
chr2 (19-123)||(17462088-17462192)
chr2 (19-123)||(22712922-22713026)
chr2 (33-123)||(22717666-22717756)
chr2 (19-123)||(30478666-30478770)
chr2 (22-123)||(33674835-33674936)
chr2 (19-123)||(12781647-12781751)
chr2 (42-123)||(17943210-17943291)
chr2 (40-124)||(20055217-20055301)
chr2 (19-123)||(27518047-27518151)
chr2 (40-123)||(20050471-20050554)
chr2 (40-123)||(35894688-35894771)
chr2 (42-123)||(37171202-37171283)
chr2 (42-123)||(38190649-38190730)
chr2 (71-121)||(5377898-5377948)
chr2 (77-123)||(45280457-45280503)
chr2 (77-122)||(17932328-17932373)
[»] chr1 (10 HSPs)
chr1 (19-123)||(9526117-9526221)
chr1 (19-123)||(9521367-9521471)
chr1 (22-123)||(2232262-2232363)
chr1 (40-124)||(21353774-21353858)
chr1 (40-123)||(2393729-2393812)
chr1 (40-123)||(2401643-2401726)
chr1 (40-123)||(2617280-2617363)
chr1 (42-123)||(25133681-25133762)
chr1 (56-123)||(23689317-23689384)
chr1 (75-123)||(20291280-20291328)
[»] scaffold0209 (1 HSPs)
scaffold0209 (19-123)||(17392-17496)
[»] chr5 (15 HSPs)
chr5 (19-123)||(35385858-35385962)
chr5 (19-117)||(1170470-1170568)
chr5 (19-123)||(25452146-25452250)
chr5 (40-123)||(2298445-2298528)
chr5 (40-123)||(40222414-40222497)
chr5 (41-123)||(42237954-42238036)
chr5 (38-123)||(25445219-25445304)
chr5 (40-123)||(1240078-1240161)
chr5 (40-123)||(6747044-6747127)
chr5 (40-124)||(10529555-10529639)
chr5 (40-123)||(22672504-22672587)
chr5 (40-124)||(6744800-6744884)
chr5 (40-123)||(4409797-4409880)
chr5 (40-121)||(39854226-39854307)
chr5 (68-118)||(17841766-17841816)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-106)||(224510-224597)
[»] scaffold1764 (1 HSPs)
scaffold1764 (17-123)||(1108-1214)
[»] scaffold0131 (1 HSPs)
scaffold0131 (22-121)||(30795-30894)
[»] scaffold0256 (1 HSPs)
scaffold0256 (19-123)||(15976-16080)
[»] scaffold0004 (1 HSPs)
scaffold0004 (41-124)||(188671-188754)
[»] scaffold0552 (1 HSPs)
scaffold0552 (40-123)||(1266-1349)
[»] scaffold0038 (1 HSPs)
scaffold0038 (45-123)||(41944-42022)
[»] scaffold0016 (1 HSPs)
scaffold0016 (83-123)||(120569-120609)
[»] scaffold0691 (1 HSPs)
scaffold0691 (124-208)||(4252-4336)


Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 124 - 426
Target Start/End: Original strand, 2820514 - 2820816
Alignment:
Q  124 cctacgatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatccgtataga 223  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2820514 cctacgatggtgaaattttgcattttcgaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatctgtataga 2820613  T
Q  224 cgaaggaactttgatctctcttgaatatcttaccatgaacagaatccccgaactgatgggggtaccctccggcatcatgttcttgaataatctcaaagct 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||    
T  2820614 cgaaggaactttgatctctcttgaatatcttaccatgaacagaatccccgaactgatggaggtaccctacggcatcaagtccttgaataatctcaaagct 2820713  T
Q  324 attaacttcaatgaaatgtcgtatgaacttgttgagagtattgaaacagacaaaggaaaagaccactggattatcaagcatgttcctcttgtatcctttc 423  Q
    |||||||||| ||||||| |  ||||| |  |||||||||||||   | |||| ||||| ||| | |||| ||||||||||| |||||||||||||||||    
T  2820714 attaacttcagtgaaatggcagatgaattctttgagagtattgatcaaaacaatggaaatgactattggagtatcaagcatgctcctcttgtatcctttc 2820813  T
Q  424 atc 426  Q
    |||    
T  2820814 atc 2820816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 124 - 426
Target Start/End: Original strand, 2761168 - 2761470
Alignment:
Q  124 cctacgatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatccgtataga 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| | ||||| ||||||    
T  2761168 cctatgatggtgaaattttgcattttcaaattggagggtttctaaagttgaagagactgaacctcaggcgcttgaatagggtaaattctatccttataga 2761267  T
Q  224 cgaaggaactttgatctctcttgaatatcttaccatgaacagaatccccgaactgatgggggtaccctccggcatcatgttcttgaataatctcaaagct 323  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||||| | || | || ||| ||||| ||||||| || |||| |||| ||||||| |    
T  2761268 cgaaggaactttgatctctcttgaatatctgaacatggacagaatcccccagctaaaggaggtgccctcaggcatcaggtccttggataaactcaaagat 2761367  T
Q  324 attaacttcaatgaaatgtcgtatgaacttgttgagagtattgaaacagacaaaggaaaagaccactggattatcaagcatgttcctcttgtatcctttc 423  Q
    |||||||||| ||||||| | | |||| ||||||| ||||||||  ||||||||||||||||| ||  ||||||||||||||| |||||||||||| |||    
T  2761368 attaacttcactgaaatgccatctgaatttgttgaaagtattgatccagacaaaggaaaagactacatgattatcaagcatgtccctcttgtatccattc 2761467  T
Q  424 atc 426  Q
    |||    
T  2761468 atc 2761470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 124 - 426
Target Start/End: Original strand, 2809221 - 2809523
Alignment:
Q  124 cctacgatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatccgtataga 223  Q
    |||| |||||||||||||| |||||||| | ||| |||||| ||||||||| || |||  | ||||||||||||||||||||| |   | ||| ||||||    
T  2809221 cctatgatggtgaaattttacattttcagaatggcgggtttttaaaattgaggaaactagatctcagtcgcttgaatagagtacatactgtccttataga 2809320  T
Q  224 cgaaggaactttgatctctcttgaatatcttaccatgaacagaatccccgaactgatgggggtaccctccggcatcatgttcttgaataatctcaaagct 323  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||| || ||||||||| |||||||  | |||| |||| |||||||||    
T  2809321 cgaaggaactttgatctctcttgaatatcttaccatggacagaataccccagctgaaggaggtaccctcaggcatcagatccttggataaactcaaagct 2809420  T
Q  324 attaacttcaatgaaatgtcgtatgaacttgttgagagtattgaaacagacaaaggaaaagaccactggattatcaagcatgttcctcttgtatcctttc 423  Q
    |||||||||| ||||||| |   |||| ||||||| ||  ||||  ||||||||||||||||| || |||| |||||||||||||||||||||||| |||    
T  2809421 attaacttcactgaaatgccagctgaatttgttgaaagcgttgatccagacaaaggaaaagactaccggataatcaagcatgttcctcttgtatccattc 2809520  T
Q  424 atc 426  Q
    |||    
T  2809521 atc 2809523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 10208426 - 10208530
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10208426 aaatttccagtgtcttcccagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 10208525  T
Q  119 tcaca 123  Q
    |||||    
T  10208526 tcaca 10208530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 10094494 - 10094598
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10094494 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtgacgcgatgcttctccatcgtggaacgatactccagatttctgattttaagttaactc 10094593  T
Q  119 tcaca 123  Q
    |||||    
T  10094594 tcaca 10094598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 10100517 - 10100621
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10100517 aaatttccagtgtcttcccagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactctagatttctgattttaagttaactc 10100616  T
Q  119 tcaca 123  Q
    |||||    
T  10100617 tcaca 10100621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 10201380 - 10201484
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  10201380 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggaacgatactccagatttctgattttaagttaaatc 10201479  T
Q  119 tcaca 123  Q
    |||||    
T  10201480 tcaca 10201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 47878577 - 47878681
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47878577 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 47878676  T
Q  119 tcaca 123  Q
    |||||    
T  47878677 tcaca 47878681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 16461943 - 16461853
Alignment:
Q  33 ttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16461943 ttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 16461853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 29914380 - 29914484
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29914380 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 29914479  T
Q  119 tcaca 123  Q
     ||||    
T  29914480 ccaca 29914484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 29963533 - 29963637
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29963533 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 29963632  T
Q  119 tcaca 123  Q
     ||||    
T  29963633 ccaca 29963637  T

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Target: chr3; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 22627612 - 22627695
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22627612 gaatcttgcttcaacaatcgtggcgagatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 22627695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 54192978 - 54192897
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54192978 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 54192897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 10896759 - 10896655
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||| ||||| | ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10896759 aaatttccagtagcttcctaggaaccatgcttcagcaatcgtggcgcgatgcttctccatcgtggcacgatactccatatttctgattttaagttaactc 10896660  T
Q  119 tcaca 123  Q
    |||||    
T  10896659 tcaca 10896655  T

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Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 5858280 - 5858197
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  5858280 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagattcctgattttaagttaactctcaca 5858197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 10595437 - 10595541
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10595437 aaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcaatgtttctccatcgtggcacgattctccagatttctgattttaagttaactc 10595536  T
Q  119 tcaca 123  Q
    |||||    
T  10595537 tcaca 10595541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 54188240 - 54188160
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 122  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  54188240 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattcttcagatttctgattttaagttaactctcac 54188160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 10901463 - 10901398
Alignment:
Q  58 cgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10901463 cgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 10901398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 417
Target Start/End: Original strand, 2771019 - 2771307
Alignment:
Q  129 gatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatccgtatagacgaag 228  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| || |||||| ||| || ||||||||| ||| || |  ||   ||| ||| | |    
T  2771019 gatggtgaaatttttcattttcaaaatggagggtttctaaaattgatgacactgaatctccgttgcttgaataaagttaactccattgttattgaccatg 2771118  T
Q  229 gaactttgatctctcttgaatatcttaccatgaacagaatccccgaactgatgggggtaccctccggcatcatgttcttgaataatctcaaagctattaa 328  Q
    ||| |||| ||||||||||| |||||||  || | | ||||||| |||||| || ||||||||  |||||||   || || |||| ||||||| |||| |    
T  2771119 gaaatttgctctctcttgaacatcttacactggaaaaaatcccccaactgaaggaggtaccctttggcatcaaactcatgcataaactcaaagatattca 2771218  T
Q  329 cttcaatgaaatgtcgtatgaacttgttgagagtattgaaacagacaaaggaaaagaccactggattatcaagcatgttcctcttgtat 417  Q
    | ||| ||| ||| |   |||| ||||||| || |||||  |||| |||||  ||||| ||| ||||||||||||||||||||||||||    
T  2771219 catcactgatatgccagctgaatttgttgaaagcattgatccagataaagggcaagactactcgattatcaagcatgttcctcttgtat 2771307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 51727460 - 51727543
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  51727460 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 51727543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 43225910 - 43225825
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacacc 125  Q
    |||| |||||||||| ||||| || ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  43225910 gaattttgcttcaacaatcgtagcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcacacc 43225825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 4308735 - 4308818
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  4308735 gaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattctccagaattctgattttaagttaactctcaca 4308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 35918403 - 35918486
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  35918403 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccataattctgattttaagttaactctcaca 35918486  T

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Target: chr3; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 10949729 - 10949810
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| |||||| |||||||| || |||||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  10949729 atcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttctccagattcctgattttaagttaactctcaca 10949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 417
Target Start/End: Original strand, 2792273 - 2792561
Alignment:
Q  129 gatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatccgtatagacgaag 228  Q
    |||||||||||||| |||||||||| |||||||||||| ||| ||| || |||||||||| || ||||| ||| |||||| |   |   ||| ||| | |    
T  2792273 gatggtgaaatttttcattttcaaaatggagggtttcttaaactgatgacactgaacctccgttgcttgtataaagtaaactcggttgttattgacaatg 2792372  T
Q  229 gaactttgatctctcttgaatatcttaccatgaacagaatccccgaactgatgggggtaccctccggcatcatgttcttgaataatctcaaagctattaa 328  Q
    |||| ||| ||||||| ||| |||||||  || | | ||||||| |||||| || ||||||||| |||||||   || || |||| ||||||| |||| |    
T  2792373 gaaccttgctctctctcgaacatcttactctggaaaaaatcccccaactgaaggcggtaccctctggcatcaaactcatgcataaactcaaagatattca 2792472  T
Q  329 cttcaatgaaatgtcgtatgaacttgttgagagtattgaaacagacaaaggaaaagaccactggattatcaagcatgttcctcttgtat 417  Q
    | ||| ||| ||| |   |||| ||||||| ||  ||||  |||| |||||  ||||| ||| ||||||||||||||||||||||||||    
T  2792473 cgtcactgatatgccagctgaatttgttgaaagctttgatccagataaagggcaagactactcgattatcaagcatgttcctcttgtat 2792561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 10613205 - 10613293
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattt 107  Q
    |||||||||||  |||||   ||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  10613205 aaatttccagtagcttcctcagaatcttgcttcaacaatcgtggtgcgatgtttctccatcgtggcacgattctccagatttctgattt 10613293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 20031798 - 20031882
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgctt-ctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||||| |  ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  20031798 gaatcttgcttcaacaatcgtggcacattgctttctccatcgtggcacgtttctccagatttctgattttaagttaactctcaca 20031882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 9605067 - 9605150
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| |||  |||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  9605067 gaattttgcttcaacaatcgtggcacgaaacttctccatcgtagcacgattctccagaattctgattttaagttaactctcaca 9605150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 29956300 - 29956218
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 122  Q
    |||| |||||||||| |||||||| ||| |||||||||||||| ||||||  |||||| ||||||||||||||||||||||||    
T  29956300 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtgacacgattatccagaattctgattttaagttaactctcac 29956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 30005455 - 30005373
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 122  Q
    |||| |||||||||| |||||||| ||| |||||||||||||| ||||||  |||||| ||||||||||||||||||||||||    
T  30005455 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtgacacgattatccagaattctgattttaagttaactctcac 30005373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 27762476 - 27762557
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| |||||| |||||||| || |||||||||||||||||||| | || |||||| |||||||||||||||||||||||    
T  27762476 atcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttcttcagattcctgattttaagttaactctcaca 27762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 11079236 - 11079169
Alignment:
Q  56 atcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||| || |||||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  11079236 atcgtggcacgttgcttctccatcgtggcacgtttctccagattactgattttaagttaactctcaca 11079169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 25690818 - 25690893
Alignment:
Q  48 cttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||| |||||||| ||| ||||||||||||||||||||| |  |||| |||||||||||||||||||||||||    
T  25690818 cttcaacaatcgtggcacgaagcttctccatcgtggcacgattcatcagaattctgattttaagttaactctcaca 25690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 27101714 - 27101797
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| ||| |||| | |  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  27101714 gaattttgcttcaacaatcatggcacaaaacttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 27101797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 2750954 - 2751080
Alignment:
Q  129 gatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatccgtatagacgaag 228  Q
    ||||||||||||||||||||||||| |||||| |||| || ||||||   |||||  ||||||| ||||||||||  ||| | ||||| ||||||  |||    
T  2750954 gatggtgaaattttgcattttcaaaatggaggatttcaaatattgaaagaactgattctcagtcacttgaatagaccaaattctatccttatagagaaag 2751053  T
Q  229 gaactttgatctctcttgaatatctta 255  Q
    || ||||| ||||||||||| ||||||    
T  2751054 gagctttgctctctcttgaaaatctta 2751080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 47883331 - 47883412
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| |||||| |||||| | || |||||||||||||||||||| | ||||| ||| |||||||||||||||||||||||    
T  47883331 atcttgtttcaacaatcgtgacacgttgcttctccatcgtggcacgtttctccaaattcctgattttaagttaactctcaca 47883412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 417
Target Start/End: Original strand, 2799320 - 2799608
Alignment:
Q  129 gatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatccgtatagacgaag 228  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||| | |||||||||  | | |||||||||| |||| |  |||  ||| ||  | |    
T  2799320 gatggtgaaatttttcattttcgaaatggagggtttctaaaattgaacacactgaaccttcgacacttgaatagaataaattccatcattattgagaatg 2799419  T
Q  229 gaactttgatctctcttgaatatcttaccatgaacagaatccccgaactgatgggggtaccctccggcatcatgttcttgaataatctcaaagctattaa 328  Q
    |||||||| | ||||||||| |||||||  || | | ||||||| | |||| || |||||||   ||||| | |  | || |||| ||||||| |||| |    
T  2799420 gaactttgctatctcttgaacatcttacactggaaaaaatcccccagctgaaggaggtacccattggcataaagcacatgcataaactcaaagatattta 2799519  T
Q  329 cttcaatgaaatgtcgtatgaacttgttgagagtattgaaacagacaaaggaaaagaccactggattatcaagcatgttcctcttgtat 417  Q
    ||||| ||| ||| |   | || ||||||| || |||||  ||||||||||| |  || |||  |||||||||||||||||||||||||    
T  2799520 cttcactgatatgccagctcaatttgttgaaagcattgatccagacaaaggacagaactactcaattatcaagcatgttcctcttgtat 2799608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 27543994 - 27543946
Alignment:
Q  75 ccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27543994 ccatcgtggcacgatactccaaatttctgattttaagttaactctcaca 27543946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 4535345 - 4535262
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||| |||||| |||||||| || |||||||||||||||  | ||| |||||||||  ||||||||||||||||||||||    
T  4535345 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgatatgattctccagattcatgattttaagttaactctcaca 4535262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 2853995 - 2853874
Alignment:
Q  126 tacgatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaagtatatccgtatagacg 225  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||   |||||  ||||||  ||||||||||  ||| | ||| | ||||||      
T  2853995 tacgatggtgaaattttgcattttcaaaatggaggatttcaaaaattgaaagaactgattctcagttacttgaatagaccaaattctattcttatagaga 2853896  T
Q  226 aaggaactttgatctctcttga 247  Q
    ||||| ||||||| ||||||||    
T  2853895 aaggagctttgatttctcttga 2853874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 6303064 - 6303015
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgct 71  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  6303064 tttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgct 6303015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 6303032 - 6302984
Alignment:
Q  75 ccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  6303032 ccatcgtggcgcgatgctccagatttctgattttaagttaactctcaca 6302984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 43228077 - 43228032
Alignment:
Q  78 tcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||    
T  43228077 tcgtggcacgattctccagaattctgattttaagttaactctcaca 43228032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 27544026 - 27543980
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgat 68  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||    
T  27544026 tttccagtagcttcccaggaatcttgcttcaaccatcgtggcacgat 27543980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 45882734 - 45882659
Alignment:
Q  48 cttcaaccatcgtggcgcgatgcttctccatcgtggcacga-tactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||||| || || |||||||||||||||||| |  | |||| | |||||||||||||||||||||||    
T  45882734 cttcaaccatcgtggcacgttgtttctccatcgtggcacgatttttgcaga-tcctgattttaagttaactctcaca 45882659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 2836788 - 2836736
Alignment:
Q  123 acctacgatggtgaaattttgcattttcaaattggagggtttctaaaattgaa 175  Q
    |||||||| ||||||||||| |||||| ||| || |||||||| |||||||||    
T  2836788 acctacgagggtgaaattttccattttgaaaatgaagggtttcaaaaattgaa 2836736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 2853758 - 2853706
Alignment:
Q  363 attgaaacagacaaaggaaaagaccactggattatcaagcatgttcctcttgt 415  Q
    |||||| ||||||||||| |   | ||||||||||||||||||||||||||||    
T  2853758 attgaaccagacaaaggacacagctactggattatcaagcatgttcctcttgt 2853706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 38002570 - 38002494
Alignment:
Q  44 cttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctc 120  Q
    ||||||||||| ||| || |  | ||||| |||||| || |||| | ||||||||| ||||||||||||||||||||    
T  38002570 cttgcttcaacaatcatgacatgttgcttatccatcatgacacgtttctccagattactgattttaagttaactctc 38002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 3e-52; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 4812914 - 4813018
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4812914 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 4813013  T
Q  119 tcaca 123  Q
    |||||    
T  4813014 tcaca 4813018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 25684400 - 25684296
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25684400 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactc 25684301  T
Q  119 tcaca 123  Q
    |||||    
T  25684300 tcaca 25684296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 28327660 - 28327561
Alignment:
Q  24 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28327660 tccagtgtcttcccaggaatcttgcttcagccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcaca 28327561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 28332383 - 28332284
Alignment:
Q  24 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28332383 tccagtgtcttcccaggaatcttgcttcagccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcaca 28332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 16757675 - 16757776
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16757675 tttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcctctccatcgtggcacgatgctccagatttctgattttaagttaactctca 16757774  T
Q  122 ca 123  Q
    ||    
T  16757775 ca 16757776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 590570 - 590466
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  590570 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctttatcgtggcacgatactccagatttctgattttaagttaactc 590471  T
Q  119 tcaca 123  Q
    |||||    
T  590470 tcaca 590466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 16752951 - 16753052
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  16752951 tttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcctctctatcgtggcacgatgctccagatttctgattttaagttaagtctca 16753050  T
Q  122 ca 123  Q
    ||    
T  16753051 ca 16753052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 29555234 - 29555317
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  29555234 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtagcacgattctccagatttctgattttaagttaactctcaca 29555317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 9021555 - 9021638
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  9021555 gaatcttgcttcaacaatcgtgacgcgatgcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 9021638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 28895254 - 28895153
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| | || | |||||||||||| |||||    
T  28895254 tttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctacatcgtggcacgattctccaaaatttttattttaagttaagtctca 28895155  T
Q  122 ca 123  Q
    ||    
T  28895154 ca 28895153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 3276035 - 3275955
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctc 120  Q
    ||||||||||||||| |||||||| |  |||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  3276035 gaatcttgcttcaacaatcgtggcacattgcttctccatcgtggcacgtttctccagatttctgattttaagttaactctc 3275955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 21033599 - 21033520
Alignment:
Q  44 cttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||| |||||||| || |||||||||||||||||||||| |||||| |||  |||||||||||||||||||||    
T  21033599 cttgcttcaacaatcgtggcacgttgcttctccatcgtggcacgattctccagtttttagattttaagttaactctcaca 21033520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 23180008 - 23180091
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||| |||||| ||| | || ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  23180008 gaatcttgtttcaacaatcatagcacgatgcttctccatcgtagcacgattctccagattcctgattttaagttaactctcaca 23180091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 22685122 - 22685206
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||| ||| |||||| |||||||| ||| |||||| |||||||||||||| || |||| ||||||||||||||||| || |||||    
T  22685122 gaattttggttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaattctgattttaagttaagtcccacac 22685206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 3e-52; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 7069537 - 7069433
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7069537 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 7069438  T
Q  119 tcaca 123  Q
    |||||    
T  7069437 tcaca 7069433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 7074544 - 7074440
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7074544 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcacgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 7074445  T
Q  119 tcaca 123  Q
    |||||    
T  7074444 tcaca 7074440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 25405145 - 25405046
Alignment:
Q  24 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405145 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 25405046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 3320475 - 3320573
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaact 117  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3320475 aaatttccagtggcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaact 3320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 3325223 - 3325321
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaact 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3325223 aaatttccagtggcttcccaggaatcttgcttcaaccatcgtggtgcgatgcttctccatcgtggcacgatgcttcagatttctgattttaagttaact 3325321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 7464925 - 7465029
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  7464925 aaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattctgattttaagttaactc 7465024  T
Q  119 tcaca 123  Q
    |||||    
T  7465025 tcaca 7465029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 8378845 - 8378949
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  8378845 aaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccaaatttctgattttaagttaactc 8378944  T
Q  119 tcaca 123  Q
    |||||    
T  8378945 tcaca 8378949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 34547290 - 34547374
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  34547290 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgacacgattctccagatttctgattttaagttaactctcacac 34547374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 30246725 - 30246642
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30246725 gaatcttgcttcaacaatcgtggcgcaatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 30246642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 44512974 - 44513058
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| || |||||||||||||||||||||||    
T  44512974 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacaattctccagaattttgattttaagttaactctcacac 44513058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 25409884 - 25409809
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaact 117  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25409884 atcttcctccaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaact 25409809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 25351086 - 25351004
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  25351086 atcttgctccaacaatcgtggcacgatgcttctccatcgtggcacgattctccaaatttctgattttaagttaactcccacac 25351004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 25356780 - 25356698
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  25356780 atcttgctccaacaatcgtggcacgatgcttctccatcgtggcacgattctccaaatttctgattttaagttaactcccacac 25356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 40946157 - 40946076
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    |||| |||||||||| |||||||| ||| |||||| |||||||||||||| || |||| |||||||||||||||||||||||    
T  40946157 gaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaattctgattttaagttaactctca 40946076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 44144357 - 44144438
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| |||||| |||||||| || || ||||||||||||||||| | ||| ||||| |||||||||||||||||||||||    
T  44144357 atcttgtttcaacaatcgtggcacgttgtttctccatcgtggcacgtttctctagattcctgattttaagttaactctcaca 44144438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 2120638 - 2120591
Alignment:
Q  77 atcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||    
T  2120638 atcgtggcgcgatactccagaattctgattttaagttaactctcacac 2120591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 48457487 - 48457440
Alignment:
Q  77 atcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  48457487 atcgtggcacgattctccagaattctgattttaagttaactctcacac 48457440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 3878370 - 3878322
Alignment:
Q  75 ccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||| |||||| || ||||  ||||||||||||||||||||||||    
T  3878370 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 13883232 - 13883128
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13883232 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 13883133  T
Q  119 tcaca 123  Q
    |||||    
T  13883132 tcaca 13883128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 31249139 - 31249243
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31249139 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 31249238  T
Q  119 tcaca 123  Q
    |||||    
T  31249239 tcaca 31249243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 35201751 - 35201855
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35201751 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 35201850  T
Q  119 tcaca 123  Q
    |||||    
T  35201851 tcaca 35201855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 26887650 - 26887755
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26887650 aaatttccagtgtctgcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactc 26887749  T
Q  119 tcacac 124  Q
    ||||||    
T  26887750 tcacac 26887755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 30975124 - 30975228
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30975124 aaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 30975223  T
Q  119 tcaca 123  Q
    |||||    
T  30975224 tcaca 30975228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 30981563 - 30981667
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30981563 aaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 30981662  T
Q  119 tcaca 123  Q
    |||||    
T  30981663 tcaca 30981667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 30987727 - 30987831
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30987727 aaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 30987826  T
Q  119 tcaca 123  Q
    |||||    
T  30987827 tcaca 30987831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 35208991 - 35209090
Alignment:
Q  24 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35208991 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccattgtggcacgatactccagatttctgattttaagttaactctcaca 35209090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 16785673 - 16785572
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  16785673 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttttcgatcgtggcacgatgctccagatttctgattttaagttaactctca 16785574  T
Q  122 ca 123  Q
    ||    
T  16785573 ca 16785572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 13878481 - 13878380
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  13878481 tttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcatggcacgatgctccagatttctgattttaagttaactctca 13878382  T
Q  122 ca 123  Q
    ||    
T  13878381 ca 13878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 25941421 - 25941330
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaa 110  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25941421 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaa 25941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 17695299 - 17695382
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  17695299 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 17695382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 25466327 - 25466431
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||| || ||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  25466327 aaatttccagtagcttccttagaatcttgcttcaacaattgtggcacgatgcttctccatcgtggcatgattctctagatttctgattttaagttaactc 25466426  T
Q  119 tcaca 123  Q
    |||||    
T  25466427 tcaca 25466431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 1230684 - 1230767
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1230684 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 1230767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 26064839 - 26064756
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  26064839 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 26064756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 26084808 - 26084725
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  26084808 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 26084725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 28241782 - 28241860
Alignment:
Q  45 ttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||| |||| |||||||| ||| ||||||||||||||||||||| || |||| |||||||||||||||||||||||||    
T  28241782 ttgctccaacaatcgtggcacgaagcttctccatcgtggcacgattcttcagaattctgattttaagttaactctcaca 28241860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 26642912 - 26642828
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||||||| |||||| ||||| || || | |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  26642912 gaatcttgtttcaacaatcgttgcacgttccttctccatcgtggcacgtttctccagattcctgattttaagttaactctcacac 26642828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 26748878 - 26748794
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||||||| |||||| ||||| || || | |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  26748878 gaatcttgtttcaacaatcgttgcacgttccttctccatcgtggcacgtttctccagattcctgattttaagttaactctcacac 26748794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 22343257 - 22343331
Alignment:
Q  45 ttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactct 119  Q
    |||||||||| |||||||| ||| ||||||||||||||||  ||| ||||||| |||||||||||||||||||||    
T  22343257 ttgcttcaacaatcgtggcacgaagcttctccatcgtggcttgattctccagaattctgattttaagttaactct 22343331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 13467955 - 13468036
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||| |||||||| || |||||||||||||||| | | | ||||| ||| |||||||||||||||||||||||    
T  13467955 atcttgcttcaacaatcgtggcacgttgcttctccatcgtggtatgtttctccaaattcctgattttaagttaactctcaca 13468036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 33215545 - 33215499
Alignment:
Q  77 atcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  33215545 atcgtggcacgattctccagatttctgattttaagttaactctcaca 33215499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 15533145 - 15533220
Alignment:
Q  48 cttcaaccatcgtggcgcgatgcttctccatcgtggcacga-tactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||||| || ||||||||||||||||||||| | ||  ||| | |||||||||||||||||||||||    
T  15533145 cttcaaccatcgtggcacgttgcttctccatcgtggcacgatttctgtaga-tcctgattttaagttaactctcaca 15533220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 22352303 - 22352386
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| ||| |||||| |||||||| ||| |||||||||| || ||||||| ||| ||| ||  |||||||||||||||||||||    
T  22352303 gaattttgattcaacaatcgtggcacgaagcttctccattgtagcacgattctctagaatttagattttaagttaactctcaca 22352386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 14507668 - 14507716
Alignment:
Q  75 ccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||| |||||| || ||||  ||||||||||||||||||||||||    
T  14507668 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 11853306 - 11853202
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11853306 aaatttccaatgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 11853207  T
Q  119 tcaca 123  Q
    |||||    
T  11853206 tcaca 11853202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 16489084 - 16488999
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacacc 125  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16489084 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacacc 16488999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 31300178 - 31300074
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31300178 aaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgtgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 31300079  T
Q  119 tcaca 123  Q
    |||||    
T  31300078 tcaca 31300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 15312077 - 15311994
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15312077 gaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 15311994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 15316713 - 15316630
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15316713 gaatcttgcttcaacaatcgtgacgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 15316630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 18586699 - 18586616
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18586699 gaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 18586616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 40636972 - 40636868
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  40636972 aaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccaaaattctgattttaagttaactc 40636873  T
Q  119 tcaca 123  Q
    |||||    
T  40636872 tcaca 40636868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 15830896 - 15830817
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactct 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15830896 gaatcttgcttcaacaatcgtggcgtgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactct 15830817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 8529001 - 8528917
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  8529001 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgacacgattctccagaaatctgattttaagttaactctcacac 8528917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 4884614 - 4884531
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||| | || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4884614 gaatcttgcttcaacaatcgtgacacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 4884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 8631879 - 8631963
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  8631879 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctgacac 8631963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 6764737 - 6764654
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  6764737 gaattttgcttcaacaatcgtggcacgaagcttctacatcgtggcacgattctccagaattctgattttaagttaactctcaca 6764654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 4556511 - 4556585
Alignment:
Q  49 ttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| ||||||||  | |||||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  4556511 ttcaacaatcgtggcatgttgcttctccatcgtggcacgattctccagttttcagattttaagttaactctcaca 4556585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 47868273 - 47868195
Alignment:
Q  45 ttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||| || ||| | ||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  47868273 ttgcttcaacaatggtgacacgaagcttcttcatcgtggcacgattctccagaattctgattttaagttaactctcaca 47868195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 2485310 - 2485390
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| |||| ||  ||||||||||||||||||||||    
T  2485310 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctcctga-atctgattttaagttaactctca 2485390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 16689394 - 16689472
Alignment:
Q  44 cttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||| |||| ||  ||| ||||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  16689394 cttgcttcaacaatcgcggaacga-gcttctccatcgtggcacgattctccagttttcagattttaagttaactctcaca 16689472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 25699482 - 25699401
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| |||||| |||||||| || |||||||||||||||||||  | || | |||| |||||||||||||||||||||||    
T  25699482 atcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacatttcttctgattcctgattttaagttaactctcaca 25699401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 7050722 - 7050802
Alignment:
Q  43 tcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||| |||||| |||||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| | |||||||||    
T  7050722 tcttgtttcaacaatcgtggcacgttgcttctctatcgtggcacgtttctccagattcctgattttaagctgactctcaca 7050802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 26086240 - 26086292
Alignment:
Q  71 ttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  26086240 ttctccatcgtggcacgattctctagaattctgattttaagttaactctcaca 26086292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 123
Target Start/End: Complemental strand, 4569755 - 4569723
Alignment:
Q  91 ctccagatttctgattttaagttaactctcaca 123  Q
    ||||||||| |||||||||||||||||||||||    
T  4569755 ctccagattcctgattttaagttaactctcaca 4569723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 2735957 - 2735858
Alignment:
Q  24 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2735957 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 2735858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 2740693 - 2740594
Alignment:
Q  24 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2740693 tccagtgtcttcccaagaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 2740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 39686735 - 39686636
Alignment:
Q  24 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39686735 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcaca 39686636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 45567166 - 45567062
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  45567166 aaatttccagtgtctgcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaacgc 45567067  T
Q  119 tcaca 123  Q
    |||||    
T  45567066 tcaca 45567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 39679797 - 39679698
Alignment:
Q  24 tccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39679797 tccagtatcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcaca 39679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 17462192 - 17462088
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17462192 aaatttccagtgtctgaccaggaatcttgcttcatccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactc 17462093  T
Q  119 tcaca 123  Q
    |||||    
T  17462092 tcaca 17462088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 22712922 - 22713026
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22712922 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 22713021  T
Q  119 tcaca 123  Q
    |||||    
T  22713022 tcaca 22713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 22717666 - 22717756
Alignment:
Q  33 ttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22717666 ttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgatacttcagatttctgattttaagttaactctcaca 22717756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 30478770 - 30478666
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30478770 aaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 30478671  T
Q  119 tcaca 123  Q
    |||||    
T  30478670 tcaca 30478666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 33674835 - 33674936
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||  ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  33674835 tttccagtagcttcccaggaatcttacttcaacaatcgtggcgcgatacttctccatcgtggcacgattctctagatttctgattttaagttaactctca 33674934  T
Q  122 ca 123  Q
    ||    
T  33674935 ca 33674936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 12781647 - 12781751
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12781647 aaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattatccagatttctgattttaagttaactc 12781746  T
Q  119 tcaca 123  Q
    |||||    
T  12781747 tcaca 12781751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 17943291 - 17943210
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17943291 atcttacttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 17943210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 20055217 - 20055301
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  20055217 gaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcatgattctccagaattctgattttaagttaactctcacac 20055301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 27518047 - 27518151
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  |||||   ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  27518047 aaatttccagtagcttcctcagaatcttgcttcaaaaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattttgattttaagttaactc 27518146  T
Q  119 tcaca 123  Q
    |||||    
T  27518147 tcaca 27518151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 20050471 - 20050554
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  20050471 gaatcttgctgcaacaatcgtggcacgatgcttctccatcgtggcacgattctccagaattttgattttaagttaactctcaca 20050554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 35894688 - 35894771
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| | || || ||||||| |||||||||||||||||||||||||    
T  35894688 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtagtacaattctccagaattctgattttaagttaactctcaca 35894771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 37171202 - 37171283
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| |||||| ||| |||| || |||||||||||||||||||| | ||||||||| || ||||||||||||||||||||    
T  37171202 atcttgtttcaacaatcatggcacgttgcttctccatcgtggcacgtttctccagattccttattttaagttaactctcaca 37171283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 38190730 - 38190649
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||| |||||| |||||||| || |||||||||||||||||||| | ||||| ||| |||||||||| ||||||||||||    
T  38190730 atcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttctccatattcctgattttaaattaactctcaca 38190649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 5377898 - 5377948
Alignment:
Q  71 ttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  5377898 ttctccatcgtagcacgattctccagaattctgattttaagttaactctca 5377948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 45280457 - 45280503
Alignment:
Q  77 atcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  45280457 atcgtggcacgattctccagaattctgattttaagttaactctcaca 45280503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 17932373 - 17932328
Alignment:
Q  77 atcgtggcacgatactccagatttctgattttaagttaactctcac 122  Q
    ||||||||||||| || |||||||||||||||||||||||||||||    
T  17932373 atcgtggcacgattcttcagatttctgattttaagttaactctcac 17932328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 9526221 - 9526117
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9526221 aaatttccagtgtcttcccagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactc 9526122  T
Q  119 tcaca 123  Q
    |||||    
T  9526121 tcaca 9526117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 9521471 - 9521367
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9521471 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 9521372  T
Q  119 tcaca 123  Q
    |||||    
T  9521371 tcaca 9521367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 2232363 - 2232262
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2232363 tttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcatgatgctccagatttctgattttaagttaactctca 2232264  T
Q  122 ca 123  Q
    ||    
T  2232263 ca 2232262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 21353774 - 21353858
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  21353774 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactcccacac 21353858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 2393729 - 2393812
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2393729 gaatcttgcttcaacaatcgtggcgtgaagcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 2393812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 2401643 - 2401726
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||||||  | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2401643 gaatcttgcttcaacaatcgtggcgaaaagcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 2401726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 2617363 - 2617280
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| |||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  2617363 gaattttgcttcaacaatcgtggcacgaaacttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 2617280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 25133762 - 25133681
Alignment:
Q  42 atcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||| |||||||| || ||||||||||||||| |||| | ||||||||| |||||||||||||||||||||||    
T  25133762 atcttgcttcaacaatcgtggcacgttgcttctccatcgtgacacgtttctccagattcctgattttaagttaactctcaca 25133681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 23689317 - 23689384
Alignment:
Q  56 atcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  23689317 atcgtggcgcgatgcttctccatcgtggcatgattctctagatttttgattttaagttaactctcaca 23689384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 20291328 - 20291280
Alignment:
Q  75 ccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||| |||||| || ||||  ||||||||||||||||||||||||    
T  20291328 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 20291280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 17392 - 17496
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17392 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctctatcgtggcacgatactccagatttctgattttaagttaactc 17491  T
Q  119 tcaca 123  Q
    |||||    
T  17492 tcaca 17496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 9e-43; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 35385858 - 35385962
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35385858 aaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgatactctagatttctgattttaagttaactc 35385957  T
Q  119 tcaca 123  Q
    |||||    
T  35385958 tcaca 35385962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 1170568 - 1170470
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaact 117  Q
    |||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1170568 aaattttcagtgtctgcccaggaatcttgcttcagccattgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaact 1170470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 25452250 - 25452146
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    |||||||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  25452250 aaatttccagtagcttcccaggaatcttgcttcatcaatcgtggcgcgatgcttctccatcgtggcacgattctccatatttctaattttaagttaactc 25452151  T
Q  119 tcaca 123  Q
    |||||    
T  25452150 tcaca 25452146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 2298445 - 2298528
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2298445 gaatcttgcttcaacagtcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 2298528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 40222497 - 40222414
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40222497 gaatcttgcttcaacaatcgtggcacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 40222414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 42238036 - 42237954
Alignment:
Q  41 aatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42238036 aatcttgcttcaacaatcgtggcacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 42237954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 25445304 - 25445219
Alignment:
Q  38 aggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||    
T  25445304 aggaatcttgcttcatcaatcgtggcgcgatgcttctccatcatggtacgattctccagatttctaattttaagttaactctcaca 25445219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 1240161 - 1240078
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1240161 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 1240078  T

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Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 6747127 - 6747044
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  6747127 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 6747044  T

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Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 10529555 - 10529639
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||| |||||||||| |||||||| ||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  10529555 gaattttgcttcaacaatcgtggcacgaagcttctcgatcgtggcacgattctccagaattctgattttaagttaactctcacac 10529639  T

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Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 22672587 - 22672504
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||||||||||||| || ||||||| |||||| |||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  22672587 gaatcttgcttcaacaattgtggcgcaatgcttttccatcgtggcacgattctccagaattctaattttaagttaactctcaca 22672504  T

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Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 6744884 - 6744800
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||| |||||||||| |||||||| ||| | ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  6744884 gaattttgcttcaacaatcgtggcacgaagtttctccatcgtggcacgattctccagaattctgattttaaattaactctcacac 6744800  T

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Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 4409880 - 4409797
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| |||||| |||||||||||||| || ||||  |||||||||||||||||| |||||    
T  4409880 gaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaactctgattttaagttaactttcaca 4409797  T

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Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 39854307 - 39854226
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    |||| |||||||||| |||||||| |||  |||||| ||| || |||||| ||||||| |||| ||||||||||||||||||    
T  39854307 gaattttgcttcaacaatcgtggcacgaaacttctctatcatgacacgattctccagaattctaattttaagttaactctca 39854226  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 17841766 - 17841816
Alignment:
Q  68 tgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||||||||||| |||| | ||||||||| |||||||||| |||||||    
T  17841766 tgcttctccatcgtgacacgtttctccagattcctgattttaaattaactc 17841816  T

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Target: scaffold0006 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 224597 - 224510
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  224597 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 224510  T

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Target: scaffold1764 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 1214 - 1108
Alignment:
Q  17 caaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaac 116  Q
    |||||||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1214 caaaatttccagtagcttcccaagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaac 1115  T
Q  117 tctcaca 123  Q
    |||||||    
T  1114 tctcaca 1108  T

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Target: scaffold0131 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 30894 - 30795
Alignment:
Q  22 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctca 121  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30894 tttccagtagcttcccaggaatcttgcttcaaccatcctggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctca 30795  T

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Target: scaffold0256 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 16080 - 15976
Alignment:
Q  19 aaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactc 118  Q
    ||||||| |||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16080 aaatttctagtagcttcccaggaagcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 15981  T
Q  119 tcaca 123  Q
    |||||    
T  15980 tcaca 15976  T

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Target: scaffold0004 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 188671 - 188754
Alignment:
Q  41 aatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcacac 124  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  188671 aatcttgcttcaacaatcgtggcgcgatgcttctccatcgtagcacgattctccagatttctaattttaagttaactctcacac 188754  T

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Target: scaffold0552 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 1266 - 1349
Alignment:
Q  40 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||| |||||||||| |||||||| ||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1266 gaattttgcttcaacaatcgtggcacgaagcttctacatcgtggcacgattctccagaattctgattttaagttaactctcaca 1349  T

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Target: scaffold0038 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 41944 - 42022
Alignment:
Q  45 ttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 123  Q
    ||||| |||| |||||||| ||| ||||||||||||||||||||| || |||| |||||||||||||||||||||||||    
T  41944 ttgctccaacaatcgtggcacgaagcttctccatcgtggcacgattcttcagaattctgattttaagttaactctcaca 42022  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 120609 - 120569
Alignment:
Q  83 gcacgatactccagatttctgattttaagttaactctcaca 123  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  120609 gcacgatactccagatttctgattttaagttaactctcaca 120569  T

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Target: scaffold0691 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 4336 - 4252
Alignment:
Q  124 cctacgatggtgaaattttgcattttcaaattggagggtttctaaaattgaagagactgaacctcagtcgcttgaatagagtaaa 208  Q
    |||| ||||| ||| ||||||||||||||| |||||| |||  |||||||| || |||||| || |||||||||| || ||||||    
T  4336 cctatgatggcgaagttttgcattttcaaagtggaggatttaaaaaattgatgacactgaatcttagtcgcttgagtaaagtaaa 4252  T

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