View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4671-Insertion-1 (Length: 751)
Name: NF4671-Insertion-1
Description: NF4671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4671-Insertion-1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 735; Significance: 0; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 735; E-Value: 0
Query Start/End: Original strand, 8 - 750
Target Start/End: Complemental strand, 9218510 - 9217768
Alignment:
| Q |
8 |
cttctaacaggtgccaaacctctttcttttaacaggccagaagagaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaactttttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9218510 |
cttctaacaggtgccaaacctctttcttttaacaggccagaagagaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaactttttg |
9218411 |
T |
|
| Q |
108 |
atgctattcaagttggaattttcaatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaag |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9218410 |
atgctattcaagttggaattttcaatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaag |
9218311 |
T |
|
| Q |
208 |
acctagtatgagggaagtagctatggagttggatggcataaggttaatggagaagcatccttggaatgatacagagcaaaattttgaggagagtcaacgc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9218310 |
acctagtatgagggaagtagctatggagttggatggcataaggttaatggagaagcatccttggaatgatacagagcaaaattttgaggagagtcaacgc |
9218211 |
T |
|
| Q |
308 |
ttacttcatgaggcatcttgtagtatctacaatgaaactgatgatagctataaccctggatatagtgggtatgatagcttgaaagatcagccattgattg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9218210 |
ttacttcatgaggcatcttgtagtatctacaatgaaactgatgatagctataaccctggatataatgggtatgatagcttgaaagatcagccattgattg |
9218111 |
T |
|
| Q |
408 |
tcttggatgatggaagatgattgtgatatatatatacctttcactataggatcaattgattttgaaagtgttggtaaaaagactttctattgtgaatgat |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9218110 |
tcttggatgatggaagatgattgtgatatatatatacctttcactataggatcaattgattttgaaagggttggtaaaaagactttctattgtgaatgat |
9218011 |
T |
|
| Q |
508 |
tgacctaataaattttttacttttgattttatttattgataaagtcattacatgtatgtagttatcactataggatcaatatataaactttcattgttaa |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9218010 |
tgacctaataaattttttacttttgattttatttattgataaagtcattacatgtatgtagttatcactataggatcaatatataaactttcattgttaa |
9217911 |
T |
|
| Q |
608 |
taattattttaatcatgttactagtatgcagtatccactaatttcattgttaacaatttgctaagggttgtcaagaatgtcaaaaacatgcaggaataca |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9217910 |
taattattttaatcatgttactagtatgcagtatccactaatttcattgttaacaatttgctaagggttgtcaagaatgtcaaaaacatgcaggaataca |
9217811 |
T |
|
| Q |
708 |
acatgtgcctccaagtgaactacattttattgtgaagccttgg |
750 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9217810 |
acatgtgcctccaagtgaactacattttattgtgaagccttgg |
9217768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 8 - 440
Target Start/End: Complemental strand, 9199994 - 9199562
Alignment:
| Q |
8 |
cttctaacaggtgccaaacctctttcttttaacaggccagaagagaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaactttttg |
107 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9199994 |
cttctaacaggtgacaaacctctttcttttaacaggcaagaagaaaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaactttttg |
9199895 |
T |
|
| Q |
108 |
atgctattcaagttggaattttcaatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaag |
207 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9199894 |
atgctattcaagttggaattttggatgatgaaaacaagaaagagattaaggaggttgctattcttgctgcaaggtgtttaagacttagaggtgatgaaag |
9199795 |
T |
|
| Q |
208 |
acctagtatgagggaagtagctatggagttggatggcataaggttaatggagaagcatccttggaatgatacagagcaaaattttgaggagagtcaacgc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| | |
|
|
| T |
9199794 |
acctagtatgagggaagtagctatggagttggatggtataaggttaatggagaagcatccttggaatgatacagaacaaaactttgaagagagtcaacac |
9199695 |
T |
|
| Q |
308 |
ttacttcatgaggcatcttgtagtatctacaatgaaactgatgatagctataaccctggatatagtgggtatgatagcttgaaagatcagccattgattg |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9199694 |
ttacttcatgaggcatcttgtagtatctacaatgaaactggtgatagctacaaccctggatatagtgggtatgatagcttgaaagatcaaccattgattg |
9199595 |
T |
|
| Q |
408 |
tcttggatgatggaagatgattgtgatatatat |
440 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| |
|
|
| T |
9199594 |
tcttggatagtggaagatgattgtgatgtatat |
9199562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 8 - 436
Target Start/End: Complemental strand, 9170427 - 9169999
Alignment:
| Q |
8 |
cttctaacaggtgccaaacctctttcttttaacaggccagaagagaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaactttttg |
107 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9170427 |
cttctaacaggtgacaaacctctttcttttaataggccagaagagaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaattttttg |
9170328 |
T |
|
| Q |
108 |
atgctattcaagttggaattttcaatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaag |
207 |
Q |
| |
|
| ||||||||||||||| || | || ||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
9170327 |
aagctattcaagttggatttgtgaacgatgataacaagaaagagattaaggaggttgctattcttgcttcaaggtgtttaagacttagaggggatgaaag |
9170228 |
T |
|
| Q |
208 |
acctagtatgagggaagtagctatggagttggatggcataaggttaatggagaagcatccttggaatgatacagagcaaaattttgaggagagtcaacgc |
307 |
Q |
| |
|
|||| |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9170227 |
accttgtatgaaggaagtggcaatggagttggatggcataaggttaatggagaagcatccttggaatgatacagagcaaaattttgaggagagtcaacgc |
9170128 |
T |
|
| Q |
308 |
ttacttcatgaggcatcttgtagtatctacaatgaaactgatgatagctataaccctggatatagtgggtatgatagcttgaaagatcagccattgattg |
407 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||||| |
|
|
| T |
9170127 |
ttacttcatgaggcatcttgtagtatttataatgaaactggtgatagctataaccttggatataatggatatgatagcttgaaagatcaatcattgattg |
9170028 |
T |
|
| Q |
408 |
tcttggatgatggaagatgattgtgatat |
436 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
9170027 |
ccttggatgatggaagatgattgtgatat |
9169999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 22 - 436
Target Start/End: Complemental strand, 9161587 - 9161173
Alignment:
| Q |
22 |
caaacctctttcttttaacaggccagaagagaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaactttttgatgctattcaagtt |
121 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
9161587 |
caaacctctttcttttaataggccagaagagaatatcagtcttgctatgcactttttgtcttgtttaaaacaagatagaatttttgaagctattcaagtt |
9161488 |
T |
|
| Q |
122 |
ggaattttcaatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaagacctagtatgaggg |
221 |
Q |
| |
|
|| ||||| ||||||||||||||| | ||||||||||||||| |||||||||| ||||||||||| ||||| ||||| |||||||| ||||| |||| || |
|
|
| T |
9161487 |
ggtattttaaatgatgaaaacaaggaggagattaaggaggttgctattcttgcagcaaggtgtttgagactaagaggggatgaaaggcctagcatgaagg |
9161388 |
T |
|
| Q |
222 |
aagtagctatggagttggatggcataaggttaatggagaagcatccttggaatgatacagagcaaaattttgaggagagtcaacgcttacttcatgaggc |
321 |
Q |
| |
|
|||| || |||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||| ||||||| | ||||| |
|
|
| T |
9161387 |
aagtggcaatggagttggatggtataaggttaatggagaaccatccttggaatgattcagagctaaattttgaggagagacaacacttacttaaagaggc |
9161288 |
T |
|
| Q |
322 |
atcttgtagtatctacaatgaaactgatgatagctataaccctggatatagtgggtatgatagcttgaaagatcagccattgattgtcttggatgatgga |
421 |
Q |
| |
|
||||| |||||| || ||||||| || ||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
9161287 |
atcttctagtatttataatgaaattggtgaaagcattaaccttggatatagtgggtatgatagcttgaaagatcaaccattgattgccttagatgatgga |
9161188 |
T |
|
| Q |
422 |
agatgattgtgatat |
436 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
9161187 |
agatgattgtgatat |
9161173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 433
Target Start/End: Original strand, 9118851 - 9119277
Alignment:
| Q |
8 |
cttctaacaggtgccaaacctctttcttttaacaggccagaagagaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaactttttg |
107 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9118851 |
cttctaacaggtgacaaacctcttgattttaacaggccagaagagaccattagtcttgctatgcacttcttgtcttgtttaaaacaagataaactttttg |
9118950 |
T |
|
| Q |
108 |
atgctattcaagttggaattttcaatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaag |
207 |
Q |
| |
|
| |||||||||||||||||||| |||||||| |||||| ||||||||||||||||| |||||||||| ||||||||||| |||||| |||| || ||||| |
|
|
| T |
9118951 |
aagctattcaagttggaattttgaatgatgataacaaggaagagattaaggaggttgctattcttgcagcaaggtgtttgagacttcgaggagaggaaag |
9119050 |
T |
|
| Q |
208 |
acctagtatgagggaagtagctatggagttggatggcataaggttaatggagaagcatccttggaatgatacagagcaaaattttgaggagagtcaacgc |
307 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||| |||||||| ||| || |||||| |
|
|
| T |
9119051 |
acctagtatgaaggaaatagctatggagttggatggtataaggttaaaggagatgcatccatggaatgatacagagctaaattttggggaaagccaacgc |
9119150 |
T |
|
| Q |
308 |
ttacttcatgaggcatcttgtagtatctacaatgaaactgatgatagctataaccctggatatagtggg----tatgatagcttgaaagatcagccattg |
403 |
Q |
| |
|
||||||||||||||||||| ||| | || ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| || || |
|
|
| T |
9119151 |
ttacttcatgaggcatcttctagcttttatgatgaaac---tgatagctataaccttggatatagtggggtatgatgatagcttgaaagatcaaccgtta |
9119247 |
T |
|
| Q |
404 |
attgtcttggatgatggaagatgattgtga |
433 |
Q |
| |
|
|||| | |||||||||||||||||||||| |
|
|
| T |
9119248 |
attgccgaggatgatggaagatgattgtga |
9119277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 23 - 436
Target Start/End: Complemental strand, 9155674 - 9155261
Alignment:
| Q |
23 |
aaacctctttcttttaacaggccagaagagaccattagtcttgctatgcactttttgtcttgtttaaaacaagataaactttttgatgctattcaagttg |
122 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| |
|
|
| T |
9155674 |
aaacctctatcttttaataggccagaagagagtattagtcttgcaatgcactttttgtcttgtttaaaacaagatagaatttttgaagctattcaagttg |
9155575 |
T |
|
| Q |
123 |
gaattttcaatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaagacctagtatgaggga |
222 |
Q |
| |
|
| || || ||||||||||||||| | |||||||| |||||| ||||||| || ||| |||||||| ||||| ||||||| |||||||||||||||| ||| |
|
|
| T |
9155574 |
gtatcttaaatgatgaaaacaaggaggagattaaagaggttgctattctggcagcacggtgtttacgacttcgaggtgaggaaagacctagtatgaagga |
9155475 |
T |
|
| Q |
223 |
agtagctatggagttggatggcataaggttaatggagaagcatccttggaatgatacagagcaaaattttgaggagagtcaacgcttacttcatgaggca |
322 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| | ||| ||||||||||| |||| ||||||| | ||||| |
|
|
| T |
9155474 |
aatagctatggagttggatggtataaggttaatggagaaacatccttggaatgatacagacctaaaatttgaggagagacaacacttacttaaaaaggca |
9155375 |
T |
|
| Q |
323 |
tcttgtagtatctacaatgaaactgatgatagctataaccctggatatagtgggtatgatagcttgaaagatcagccattgattgtcttggatgatggaa |
422 |
Q |
| |
|
||| |||||| || | ||||| || ||||||| | ||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
9155374 |
acttctagtatttatagtgaaattggtgatagcattgaccttggatatagtgggtatgacagcttgaaagatcaatcattgattatcttggatgatggaa |
9155275 |
T |
|
| Q |
423 |
gatgattgtgatat |
436 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
9155274 |
gatgattctgatat |
9155261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 114 - 272
Target Start/End: Complemental strand, 9229289 - 9229131
Alignment:
| Q |
114 |
ttcaagttggaattttcaatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaagacctag |
213 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||| | ||||||||||| ||| ||||||||||||||||||| || ||||||| ||| || ||||||||||| |
|
|
| T |
9229289 |
ttcaagttggtattttgaatgatgagaacaaggaggagattaaggaagttgctattcttgctgcaaggtgcttgagacttaaaggcgaggaaagacctag |
9229190 |
T |
|
| Q |
214 |
tatgagggaagtagctatggagttggatggcataaggttaatggagaagcatccttgga |
272 |
Q |
| |
|
|||| ||||| ||||||||| | || || ||||||||||||||||||| ||||||| |
|
|
| T |
9229189 |
catgaaagaagtggctatggagctagaggggttaaggttaatggagaagcacccttgga |
9229131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 588
Target Start/End: Complemental strand, 9194931 - 9194827
Alignment:
| Q |
484 |
aaaagactttctattgtgaatgattgacctaataaatt-ttttacttttgattttatttatt-gataaagtcattacatgtatgtagttatcactatagg |
581 |
Q |
| |
|
|||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||||| | |||||||||| |
|
|
| T |
9194931 |
aaaagactttgtattgtgtatgattgacccaataaatttttttacttttgattttatttattaaaaaaagtcattacatgtatgtaat--tcactatagg |
9194834 |
T |
|
| Q |
582 |
atcaata |
588 |
Q |
| |
|
|| |||| |
|
|
| T |
9194833 |
atgaata |
9194827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 9146471 - 9146401
Alignment:
| Q |
366 |
gatatagtgggtatgatagcttgaaagatcagccattgattgtcttggatgatggaagatgattgtgatat |
436 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||| |||||||| |
|
|
| T |
9146471 |
gatatagtgggtatgatagcttgaacgatcaaccatcgattgccttggatgatggaagatgactgtgatat |
9146401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 256
Target Start/End: Original strand, 1843377 - 1843502
Alignment:
| Q |
131 |
aatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaagacctagtatgagggaagtagcta |
230 |
Q |
| |
|
||||| |||||||| ||||||| |||||||| || ||||||| || | |||||| ||||||||||| || |||||||| || |||| |||||| |||| |
|
|
| T |
1843377 |
aatgaagaaaacaaacaagagatcaaggaggtggctgttcttgcggcgaagtgtttgagacttagaggggaagaaagaccaagcatgaaggaagtggcta |
1843476 |
T |
|
| Q |
231 |
tggagttggatggcataaggttaatg |
256 |
Q |
| |
|
|||| ||||| || || ||||||||| |
|
|
| T |
1843477 |
tggaattggagggaatgaggttaatg |
1843502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 256
Target Start/End: Original strand, 1857388 - 1857513
Alignment:
| Q |
131 |
aatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaagacctagtatgagggaagtagcta |
230 |
Q |
| |
|
||||| |||||||| ||||||| |||||||| || ||||||| || | |||||| ||||||||||| || |||||||| || |||| |||||| |||| |
|
|
| T |
1857388 |
aatgaagaaaacaaacaagagatcaaggaggtggctgttcttgcggcgaagtgtttgagacttagaggggaagaaagaccaagcatgaaggaagtggcta |
1857487 |
T |
|
| Q |
231 |
tggagttggatggcataaggttaatg |
256 |
Q |
| |
|
|||| ||||| || || ||||||||| |
|
|
| T |
1857488 |
tggaattggagggaatgaggttaatg |
1857513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 256
Target Start/End: Original strand, 1868986 - 1869111
Alignment:
| Q |
131 |
aatgatgaaaacaagaaagagattaaggaggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaagacctagtatgagggaagtagcta |
230 |
Q |
| |
|
||||| |||||||| ||||||| |||||||| || ||||||| || | |||||| ||||||||||| || |||||||| || |||| |||||| |||| |
|
|
| T |
1868986 |
aatgaagaaaacaaacaagagatcaaggaggtggctgttcttgcggcgaagtgtttgagacttagaggggaagaaagaccaagcatgaaggaagtggcta |
1869085 |
T |
|
| Q |
231 |
tggagttggatggcataaggttaatg |
256 |
Q |
| |
|
|||| ||||| || || ||||||||| |
|
|
| T |
1869086 |
tggaattggagggaatgaggttaatg |
1869111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 264
Target Start/End: Complemental strand, 1815728 - 1815523
Alignment:
| Q |
59 |
agtcttgctatgcactttttgtcttgtttaaaacaagataaactttttgatgctattcaagttggaattttcaatgatgaaaacaagaaagagattaagg |
158 |
Q |
| |
|
|||||||||| ||||||||| ||||| || ||| | ||||| | ||||| | |||||||| ||| | | ||||| |||||||| ||| ||| | || |
|
|
| T |
1815728 |
agtcttgctacgcactttttatcttgcttgaaaaaggataatgtgtttgaagttattcaagatggtttgtggaatgaagaaaacaaacaagtgatcatgg |
1815629 |
T |
|
| Q |
159 |
aggtttctattcttgctgcaaggtgtttaagacttagaggtgatgaaagacctagtatgagggaagtagctatggagttggatggcataaggttaatgga |
258 |
Q |
| |
|
|||| || ||||||| || | ||||| ||||||| ||| || |||||||| || |||| |||||| |||||||| ||||| || || ||||||||||| |
|
|
| T |
1815628 |
aggtggctgttcttgcggcgaactgtttgagacttataggggaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatgga |
1815529 |
T |
|
| Q |
259 |
gaagca |
264 |
Q |
| |
|
||||| |
|
|
| T |
1815528 |
taagca |
1815523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 676 - 734
Target Start/End: Complemental strand, 22849738 - 22849680
Alignment:
| Q |
676 |
tgtcaagaatgtcaaaaacatgcaggaatacaacatgtgcctccaagtgaactacattt |
734 |
Q |
| |
|
||||||||||||||| ||||| |||||| |||||||||||| | |||||| ||||||| |
|
|
| T |
22849738 |
tgtcaagaatgtcaactacatgtaggaatccaacatgtgcctgctagtgaattacattt |
22849680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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