View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4672-Insertion-2 (Length: 740)

Name: NF4672-Insertion-2
Description: NF4672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4672-Insertion-2
NF4672-Insertion-2
[»] chr7 (2 HSPs)
chr7 (8-740)||(38884162-38884896)
chr7 (12-740)||(38893354-38894078)
[»] chr1 (14 HSPs)
chr1 (12-214)||(30619994-30620196)
chr1 (8-217)||(33115832-33116041)
chr1 (338-713)||(30620320-30620696)
chr1 (42-190)||(16184718-16184866)
chr1 (563-713)||(30615794-30615945)
chr1 (587-731)||(33115298-33115444)
chr1 (327-442)||(16174790-16174905)
chr1 (327-442)||(16223847-16223962)
chr1 (42-190)||(16224108-16224256)
chr1 (327-442)||(16184457-16184572)
chr1 (594-700)||(16175060-16175166)
chr1 (594-700)||(16184196-16184302)
chr1 (594-700)||(16223586-16223692)
chr1 (12-85)||(30615240-30615313)
[»] chr3 (1 HSPs)
chr3 (586-700)||(37315767-37315881)


Alignment Details
Target: chr7 (Bit Score: 703; Significance: 0; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 703; E-Value: 0
Query Start/End: Original strand, 8 - 740
Target Start/End: Complemental strand, 38884896 - 38884162
Alignment:
Q  8 aaatcttcctattctgtctatgaaagccacggtaaaccaataacctggaactgtactgcatagagcaataagtgtttgagctcgagcaattttgtaaacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38884896 aaatcttcctattctgtctatgaaagccacggtaaaccaataacctggaactgtactgcatagagcaataagtgtttgagctcgagcaattttgtaaacc 38884797  T
Q  108 tcctcaagtgcattcatggtttgtggaggtggtatccaaccaattgcgctgaaaatatccttctggaagagattttggctataaaatgctatatcaagca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38884796 tcctcaagtgcattcatggtttgtggaggtggtatccaaccaattgcgctgaaaatatccttctggaagagattttggctataaaatgctatatcaagca 38884697  T
Q  208 agaaccaagtgcttgttgtaccaagtaaatgtagtccatgtcgactcatgaactcttttgagaacaagccatatgctttagccttttccggctccgcttt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38884696 agaaccaagtgcttgttgtaccaagtaaatgtagtccatgtcgactcatgaactcttttgagaacaagccatatgctttagccttttccggctccgcttt 38884597  T
Q  308 ctgcggttcggcttcaatctcaacctgcaaaaccttagacatatccgctgcagcctgcgctgtgttcttagcaactaaagctgtataacgagcagtttct 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38884596 ctgcggttcggcttcaatctcaacctgcaaaaccttagacatatccgctgcagcctgcgctgtgttcttagcaactaaagctgtataacgagcagtttct 38884497  T
Q  408 ggcatcttcgtccgcgagtagtaagtcattgcagccgggaatgctcctaccatcacaattatcctccaaatatagtctacttggggaacagttgaaccaa 507  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  38884496 ggcatcttcgtccgcgagtagtaagtcattgcagccgggagtgctcctaccatcacaattatcctccaaatgtagtctgcttggggaacagttgaaccaa 38884397  T
Q  508 ctggatcaacctcgtaagacggagaatcaaacctggccttgaatgcagatgaaattatgattgcaaatataccagctcccaaaattccaaaaccctgcat 607  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38884396 ctggatcaacctcgtaagacggagaatcaaacctggccttgaatgcagatgaaattatgattgcaaatataccagctcccaaaattccgaaaccctgcat 38884297  T
Q  608 ggcaaagactgctgcaatgaaggccccacgagtctttttattagaatactccgacattatggtagccgaaagtgggtagtcaccaccaataccgaa-cca 706  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38884296 ggcaaagactgctgcaatgaaggccccacgagtctttttattagaatactccgacattatggtagccgaaagtgggtagtcaccaccaataccgaaccca 38884197  T
Q  707 agccag-accggaagaagcaaagggttgtcatgac 740  Q
    |||||| ||||||||||||||||||||||||||||    
T  38884196 agccagaaccggaagaagcaaagggttgtcatgac 38884162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 12 - 740
Target Start/End: Complemental strand, 38894078 - 38893354
Alignment:
Q  12 cttcctattctgtctatgaaagccacggtaaaccaataacctggaactgtactgcatagagcaataagtgtttgagctcgagcaattttgtaaacctcct 111  Q
    |||||||| ||||| |||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  38894078 cttcctatcctgtcaatgagagccaccgtaaaccagtagcctggaactgtactgcatagagcaataagtgtttgagctcttgcgattttgtaaacctcct 38893979  T
Q  112 caagtgcattcatggtttgtggaggtggtatccaaccaattgcgctgaaaatatccttctggaagagattttggctataaaatgctatatcaagcaagaa 211  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  38893978 caagtgcattcatagtttgtgcaggtggtatccaaccaattgcactgaagatatccttctggaagagattttgactgtaaaatgctatatcaagcaagaa 38893879  T
Q  212 ccaagtgcttgttgtaccaagtaaatgtagtccatgtcgactcatgaactcttttgagaacaagccatatgctttagccttttccggctccgctttctgc 311  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||| |||||      ||||||||  ||     
T  38893878 ccaagtgcttgttgtaccaagtaaatgtagtccatgacgactcatgaactcctttgacaacaagccatatgattttgcctt------ctccgcttgttgt 38893785  T
Q  312 ggttcggcttcaatctcaacctgcaaaaccttagacatatccgctgcagcctgcgctgtgttcttagcaactaaagctgtataacgagcagtttctggca 411  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||||||||||   |||| ||||||||||| ||| || |||||||||||||||||||    
T  38893784 ggttcagcttgaatctcaacctgcaaaaccttagacatatctgctgcagcctgcttggtgtccttagcaactagagcagtgtaacgagcagtttctggca 38893685  T
Q  412 tcttcgtccgcgagtagtaagtcattgcagccgggaatgctcctaccatcacaattatcctccaaatatagtctacttggggaacagttgaaccaactgg 511  Q
    ||||| ||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| ||||||    
T  38893684 tcttcatccgccaatagtaagtcattgcagccgggagtgctcctaccatcacaattatcctccaaatgtagtctgcttgtggaacagttgaacgaactgg 38893585  T
Q  512 atcaacctcgtaagacggagaatcaaacctggccttgaatgcagatgaaattatgattgcaaatataccagctcccaaaattccaaaaccctgcatggca 611  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  38893584 atcaacctcgtaagacggtgaatcaaacatggccttgaatgcagctgaaactatgattgcaaatataccacctcccaaaattccaaacccctgcatggca 38893485  T
Q  612 aagactgctgcaatgaaggccccacgagtctttttattagaatactccgacattatggtagccgaaagtgggtagtcaccaccaataccgaa-ccaagcc 710  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| || ||||||||||| || |||||||    
T  38893484 aagactgcagcaatgaaggcaccacgagtcttcttattagaatactctgacattatagtagccgaaagcgggtaatctccaccaataccaaacccaagcc 38893385  T
Q  711 -agaccggaagaagcaaagggttgtcatgac 740  Q
     | | |||||||||||||| |||| ||||||    
T  38893384 aaaaacggaagaagcaaagagttgccatgac 38893354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 9e-32; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 30619994 - 30620196
Alignment:
Q  12 cttcctattctgtctatgaaagccacggtaaaccaataacctggaactgtactgcatagagcaataagtgtttgagctcgagcaattttgtaaacctcct 111  Q
    ||||| ||||| || ||||| || || || ||||| ||||| ||||||||||||||||  |||||||||||||| || |  |||||||| |||||||| |    
T  30619994 cttccaattctatcaatgaatgcaactgtgaaccagtaaccaggaactgtactgcataatgcaataagtgtttgcgccctcgcaattttataaacctctt 30620093  T
Q  112 caagtgcattcatggtttgtggaggtggtatccaaccaattgcgctgaaaatatccttctggaagagattttggctataaaatgctatatcaagcaagaa 211  Q
    ||||||||||||| || | || ||  || |||||||||||||| ||||| |||||||| ||||| ||||| || || |||||||| ||||||||||| ||    
T  30620094 caagtgcattcatcgtctttgcagacggaatccaaccaattgcactgaagatatccttttggaaaagattctgactgtaaaatgcaatatcaagcaaaaa 30620193  T
Q  212 cca 214  Q
    |||    
T  30620194 cca 30620196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 33116041 - 33115832
Alignment:
Q  8 aaatcttcctattctgtctatgaaagccacggtaaaccaataacctggaactgtactgcatagagcaataagtgtttgagctcgagcaattttgtaaacc 107  Q
    ||||||||| ||||| || ||||  ||||| || ||||| ||||| ||||| |||||||| || || || ||||| || |||| |||||| |||||||||    
T  33116041 aaatcttccaattctatcaatgagtgccactgtgaaccagtaaccaggaacagtactgcaaagtgctatgagtgtctgtgctctagcaatcttgtaaacc 33115942  T
Q  108 tcctcaagtgcattcatggtttgtggaggtggtatccaaccaattgcgctgaaaatatccttctggaagagattttggctataaaatgctatatcaagca 207  Q
    || || || ||| |||| ||||  |    ||| ||||| |||||||| ||||||||||| |||||||| |||||||| |||||| | || ||||| | ||    
T  33115941 tcttcgagggcactcatagttttagcttctggaatccatccaattgcactgaaaatatctttctggaaaagattttgactataataagcaatatccaaca 33115842  T
Q  208 agaaccaagt 217  Q
    ||||||||||    
T  33115841 agaaccaagt 33115832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 338 - 713
Target Start/End: Original strand, 30620320 - 30620696
Alignment:
Q  338 aaccttagacatatccgctgcagcctgcgctgtgttcttagcaactaaagctgtataacgagcagtttctggcatcttcgtccgcgagtagtaagtcatt 437  Q
    ||||||||||||||| |||||||| ||  |  | ||||| ||||| |  || || ||||| |||||||| |||||||| |  |  || || |||||||||    
T  30620320 aaccttagacatatctgctgcagcttgttccatattctttgcaacaagtgcggtgtaacgcgcagtttcaggcatcttagatcttgaataataagtcatt 30620419  T
Q  438 gcagccgggaatgctcctaccatcacaattatcctccaaatatagtctacttggggaacagttgaaccaactggatcaacctcgtaagacggagaatcaa 537  Q
    ||||| || | |||||| | ||| |  ||||||||||||| ||| ||  |||| |||||||||||||| |  ||||||| |  ||||| ||| | ||| |    
T  30620420 gcagctggaattgctccaaacattaagattatcctccaaacataatcggcttgcggaacagttgaacccaaaggatcaatcatgtaagccggtgcatcga 30620519  T
Q  538 acctggccttgaatgcagatgaaattatgattgcaaatataccagctcccaaaattccaaaaccctgcatggcaaagactgctgcaatgaaggccccacg 637  Q
    |  | |  || ||||||  |||||  ||||| ||||||| |||| || | |||||||||||||||||||| ||||| ||||| || || || || |||||    
T  30620520 atttcgatttaaatgcaattgaaacaatgatagcaaatacaccacctgctaaaattccaaaaccctgcatagcaaaaactgcagctataaacgcaccacg 30620619  T
Q  638 agtctttttattagaatactccgacattatggtagccgaaagtgggtagtcaccaccaataccg-aaccaagccaga 713  Q
     |||||||| || || || || ||||| || || || |||||||| || || |||||||||||| ||||||||||||    
T  30620620 tgtctttttgttcgagtattcagacataattgttgcagaaagtggataatctccaccaataccgaaaccaagccaga 30620696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 16184866 - 16184718
Alignment:
Q  42 aaccaataacctggaactgtactgcatagagcaataagtgtttgagctcgagcaattttgtaaacctcctcaagtgcattcatggtttgtggaggtggta 141  Q
    ||||| ||||| ||||| |||||||| |  |||||||||||||| ||||  ||||| ||||||||||| | || |||||||||   || ||  || ||||    
T  16184866 aaccagtaacccggaacagtactgcacaacgcaataagtgtttgtgctcttgcaatcttgtaaacctcatgaattgcattcatttcttttgccggaggta 16184767  T
Q  142 tccaaccaattgcgctgaaaatatccttctggaagagattttggctata 190  Q
    |||| ||||||||||| ||||| ||||| ||||| ||||| || |||||    
T  16184766 tccatccaattgcgctaaaaatgtccttttggaaaagattctgactata 16184718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 563 - 713
Target Start/End: Original strand, 30615794 - 30615945
Alignment:
Q  563 tatgattgcaaatataccagctcccaaaattccaaaaccctgcatggcaaagactgctgcaatgaaggccccacgagtctttttattagaatactccgac 662  Q
    |||||| ||||||| |||| || | | |||||||||||||||||| ||||| ||||| || |  || |||||||| || ||||| || || || || |||    
T  30615794 tatgatagcaaatacaccacctgctacaattccaaaaccctgcatagcaaaaactgcagctacaaacgccccacgtgtttttttgtttgagtattcagac 30615893  T
Q  663 attatggtagccgaaagtgggtagtcaccaccaatacc-gaaccaagccaga 713  Q
    || || ||||| |||||||| || ||||||||||||||  ||||||||||||    
T  30615894 ataattgtagcagaaagtggataatcaccaccaataccaaaaccaagccaga 30615945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 731
Target Start/End: Complemental strand, 33115444 - 33115298
Alignment:
Q  587 caaaattccaaaaccctgcatggcaaagactgctgcaatgaaggccccacgagtctttttattagaatactccgacattatggtagccgaaagtgggtag 686  Q
    ||||||||||||||| ||||| || || || || || || || || ||||||||||||||||| | |||||| ||||| || ||||| ||||| |||||     
T  33115444 caaaattccaaaaccttgcatagcgaaaacagccgctataaatgcaccacgagtctttttatttgcatactcagacatgatagtagctgaaagagggtaa 33115345  T
Q  687 tcaccaccaataccgaa-ccaagccag-accggaagaagcaaagggt 731  Q
    ||||| ||||| || || ||||||||| ||| |||||| ||||||||    
T  33115344 tcaccgccaattccaaatccaagccagaacctgaagaaacaaagggt 33115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 327 - 442
Target Start/End: Original strand, 16174790 - 16174905
Alignment:
Q  327 tcaacctgcaaaaccttagacatatccgctgcagcctgcgctgtgttcttagcaactaaagctgtataacgagcagtttctggcatcttcgtccgcgagt 426  Q
    ||||| ||||| ||||||||||||||||| ||||| ||    | |||||||||||| | ||| || |||||||| ||||||||||| ||| | ||| |||    
T  16174790 tcaacttgcaataccttagacatatccgcagcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcattcgccagt 16174889  T
Q  427 agtaagtcattgcagc 442  Q
    |||| |||| ||||||    
T  16174890 agtacgtcaatgcagc 16174905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 327 - 442
Target Start/End: Complemental strand, 16223962 - 16223847
Alignment:
Q  327 tcaacctgcaaaaccttagacatatccgctgcagcctgcgctgtgttcttagcaactaaagctgtataacgagcagtttctggcatcttcgtccgcgagt 426  Q
    ||||| ||||| ||||||||||||||||| ||||| ||    | |||||||||||| | ||| || |||||||| ||||||||||| ||| | ||| |||    
T  16223962 tcaacttgcaacaccttagacatatccgcagcagcttgtttcgcgttcttagcaacaagagccgtgtaacgagctgtttctggcattttcattcgccagt 16223863  T
Q  427 agtaagtcattgcagc 442  Q
    |||| |||| ||||||    
T  16223862 agtacgtcaatgcagc 16223847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 190
Target Start/End: Complemental strand, 16224256 - 16224108
Alignment:
Q  42 aaccaataacctggaactgtactgcatagagcaataagtgtttgagctcgagcaattttgtaaacctcctcaagtgcattcatggtttgtggaggtggta 141  Q
    ||||| ||||| ||||| |||||||| |  |||||||||||||| ||||  ||||| ||||||||||| | || |||||||||   || ||  || || |    
T  16224256 aaccagtaacccggaacagtactgcacaacgcaataagtgtttgtgctcttgcaatcttgtaaacctcatgaattgcattcatttcttttgccggaggga 16224157  T
Q  142 tccaaccaattgcgctgaaaatatccttctggaagagattttggctata 190  Q
    |||| || |||||||| ||||| ||||| ||||| ||||| || |||||    
T  16224156 tccatccgattgcgctaaaaatgtccttttggaaaagattctgactata 16224108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 442
Target Start/End: Complemental strand, 16184572 - 16184457
Alignment:
Q  327 tcaacctgcaaaaccttagacatatccgctgcagcctgcgctgtgttcttagcaactaaagctgtataacgagcagtttctggcatcttcgtccgcgagt 426  Q
    ||||| ||||| ||||||||||||||||| ||||| ||    | |||||||||||| | ||| || ||||| || ||||||||||| ||| | ||| |||    
T  16184572 tcaacttgcaataccttagacatatccgcggcagcttgtttcgcgttcttagcaacaagagcggtgtaacgggctgtttctggcattttcattcgccagt 16184473  T
Q  427 agtaagtcattgcagc 442  Q
    |||| |||| ||||||    
T  16184472 agtacgtcaatgcagc 16184457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 700
Target Start/End: Original strand, 16175060 - 16175166
Alignment:
Q  594 ccaaaaccctgcatggcaaagactgctgcaatgaaggccccacgagtctttttattagaatactccgacattatggtagccgaaagtgggtagtcaccac 693  Q
    |||||||| ||||||||||| || || ||||| || || || | ||| ||||| |||| ||| || ||||| || ||||| ||||| ||||| |||||||    
T  16175060 ccaaaaccttgcatggcaaaaacagcagcaataaatgcacctctagtttttttgttagcatattcagacatgattgtagctgaaagagggtaatcaccac 16175159  T
Q  694 caatacc 700  Q
    |||||||    
T  16175160 caatacc 16175166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 700
Target Start/End: Complemental strand, 16184302 - 16184196
Alignment:
Q  594 ccaaaaccctgcatggcaaagactgctgcaatgaaggccccacgagtctttttattagaatactccgacattatggtagccgaaagtgggtagtcaccac 693  Q
    |||||||| ||||||||||| || || ||||| || || || | ||| ||||| |||| ||| || ||||| || ||||| ||||| ||||| |||||||    
T  16184302 ccaaaaccttgcatggcaaaaacagcagcaataaatgcacctctagtttttttgttagcatattcagacatgattgtagctgaaagagggtaatcaccac 16184203  T
Q  694 caatacc 700  Q
    |||||||    
T  16184202 caatacc 16184196  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 700
Target Start/End: Complemental strand, 16223692 - 16223586
Alignment:
Q  594 ccaaaaccctgcatggcaaagactgctgcaatgaaggccccacgagtctttttattagaatactccgacattatggtagccgaaagtgggtagtcaccac 693  Q
    |||||||| ||||||||||| || || ||||| || || || | ||| ||||| |||| ||| || ||||| || ||||| ||||| ||||| |||||||    
T  16223692 ccaaaaccttgcatggcaaaaacagcagcaataaatgcacctctagtttttttgttagcatattcagacatgattgtagctgaaagagggtaatcaccac 16223593  T
Q  694 caatacc 700  Q
    |||||||    
T  16223592 caatacc 16223586  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 30615240 - 30615313
Alignment:
Q  12 cttcctattctgtctatgaaagccacggtaaaccaataacctggaactgtactgcatagagcaataagtgtttg 85  Q
    ||||| ||||| || ||||  ||||| || ||||| ||||| ||||||||||| |||| |||||||||||||||    
T  30615240 cttcccattctatcaatgagtgccactgtgaaccagtaaccaggaactgtactacataaagcaataagtgtttg 30615313  T

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Target: chr3 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 586 - 700
Target Start/End: Original strand, 37315767 - 37315881
Alignment:
Q  586 ccaaaattccaaaaccctgcatggcaaagactgctgcaatgaaggccccacgagtctttttattagaatactccgacattatggtagccgaaagtgggta 685  Q
    ||||||||||||| || ||||| ||||| || |  || || || || |||||||||||||| || | ||| || ||||| || ||||| ||||| |||||    
T  37315767 ccaaaattccaaacccttgcatagcaaaaaccgaagctataaacgcgccacgagtctttttgttggcatattcagacataatagtagctgaaagagggta 37315866  T
Q  686 gtcaccaccaatacc 700  Q
     ||||||||||||||    
T  37315867 atcaccaccaatacc 37315881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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