View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4672-Insertion-6 (Length: 233)
Name: NF4672-Insertion-6
Description: NF4672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4672-Insertion-6 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 233
Target Start/End: Original strand, 34304138 - 34304379
Alignment:
| Q |
7 |
atataatactttcaacaaatatcaaa-------agagaa--tttatagagacacaaaaaaccattacaatacctattacaacactagacacactnnnnnn |
97 |
Q |
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|||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
34304138 |
atataatactttcaacaaatatcaaacataaaaagagaagttttatagagacacaaaaaaccattacaatacccattacaacactagacacactaaaaaa |
34304237 |
T |
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| Q |
98 |
nnn---tctagacacactagaagagcgaagactatatccatcacaa---caacaacagcagcagcaacaaaaagacccattatgacaccgacacacttaa |
191 |
Q |
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||||||||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| |
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| T |
34304238 |
aaaaaatctagacacactagaagagtgaagactatatccatcacaacaacaacaacaacagtagcaacaaaaagacccattatgacaccgacacacttaa |
34304337 |
T |
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| Q |
192 |
aagaaaactagacacactcattcatcatcgaacaagtgacta |
233 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
34304338 |
aagaaaactagacacactcattcatcatcgaacaagtgacta |
34304379 |
T |
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