View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4673_high_2 (Length: 257)
Name: NF4673_high_2
Description: NF4673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4673_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 8736912 - 8737154
Alignment:
| Q |
17 |
gtatcaacacgttaagcaagctattctatcatgtacaagtaagctaagttgtgtattatgtacaagctgattttcacaattt-aaaaataactttcattt |
115 |
Q |
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| T |
8736912 |
gtatcagcacgttaagcaagctattctaacatgtacaagtaagctaagttgtgtattatgtacaagctgattttcacaatttaaaaaataactttcattt |
8737011 |
T |
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| Q |
116 |
tagataaaatgagatatcaacccacttggttgatctaatagtattagtttgagaccta------gttttgactttaaatggagtccacacaaatgaaacg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
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| T |
8737012 |
tagataaaatgagatatcaacccacttggttgatctaatagtattagtttgagacctagctttggttctgactttaaatggagtccacacaaatgaaacg |
8737111 |
T |
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| Q |
210 |
gtcggttggataacgagttttaaagcaatcatttcttctctct |
252 |
Q |
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| T |
8737112 |
gtcggttggataacgagttttaaagcaatcatttcttctctct |
8737154 |
T |
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