View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4674_high_1 (Length: 399)
Name: NF4674_high_1
Description: NF4674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4674_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 18 - 398
Target Start/End: Original strand, 45025256 - 45025636
Alignment:
| Q |
18 |
cagctatatccaattctatatgttattgggtcaatgtgttgttgatttcactctatgtaaaattttcttctacttgtaaacaaacatggacagggttttc |
117 |
Q |
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| T |
45025256 |
cagctatatccaattctatatgttattgggtcaatgtgttgttgatttcactctatgtaaaattttcttctacttgtaaacaaacatggacagggttttc |
45025355 |
T |
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| Q |
118 |
aaagagagctctgcaggatctctttgttttccttaggcttgctataccttcagctctcatggtctggtaataatttctttgaactgccaaacaatagtat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
45025356 |
aaagagagctctgcaggatctctttgttttccttagacttgctataccttcagctctcatggtctggtaataacttctttgaactgccaaacaatagtat |
45025455 |
T |
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| Q |
218 |
aatttgggaaaaattgcatctgacgtcctttaagttatatgtttgtactgcatttgtcttttaaggacgggccacataacttaaaagatcaatatgatac |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45025456 |
aatttgggaaaaattgcatctgacgtcctttaagttatatgtttgtactgcatttgtcttttaaggacgggccacataacttaaaagatcaatatgatac |
45025555 |
T |
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| Q |
318 |
aaacacatcatttaaaggatagtaaatgcaactttgcctataaatttacacaaaactagatttttcagagttcttttgatg |
398 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45025556 |
aaacacatcatttaaaggatagtaaatgcaactttgcctataaatttacacaaaactagatttttcagagttcttttgatg |
45025636 |
T |
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