View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4674_low_7 (Length: 253)
Name: NF4674_low_7
Description: NF4674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4674_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 32082404 - 32082163
Alignment:
| Q |
1 |
atgctgcttcttcttttcctcttgatttcattgaatttgatgttcaggtatatttcaattctttcatctttctttcacaataatttcannnnnnnnnnaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
32082404 |
atgctgcttcttcttttcctcttgatttcattgaatttgatgttcaggtatatttcaattctttcatctttctttcacaataatttcatttttttaa-aa |
32082306 |
T |
|
| Q |
101 |
aatataaatcattatccgaaaaatacgaatattattagattagatttagaagcacgaacgtatgtcctttttccagtttcgatcgccgcgtatctgatct |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32082305 |
aatataaatcattatccgaaaaatacgaatattattagattagatttagaagcacgaacgtatgtcctttttccagtttcggtcgccgcgtatctgatct |
32082206 |
T |
|
| Q |
201 |
gaaatcaagccgctttttctgggtttcctattttgcccctatg |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32082205 |
gaaatcaagccgctttttctgggtttcctattttgcccctatg |
32082163 |
T |
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