View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4675-Insertion-2 (Length: 1025)

Name: NF4675-Insertion-2
Description: NF4675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4675-Insertion-2
NF4675-Insertion-2
[»] chr4 (51 HSPs)
chr4 (9-685)||(53119575-53120257)
chr4 (358-622)||(53115633-53115908)
chr4 (724-825)||(6056505-6056606)
chr4 (711-825)||(53119463-53119577)
chr4 (724-825)||(32131642-32131743)
chr4 (698-825)||(866133-866263)
chr4 (724-825)||(9170554-9170655)
chr4 (724-825)||(29144712-29144813)
chr4 (696-819)||(572038-572161)
chr4 (724-825)||(44876719-44876820)
chr4 (711-818)||(55593250-55593357)
chr4 (362-468)||(53110381-53110487)
chr4 (704-816)||(31970813-31970925)
chr4 (703-819)||(47864564-47864680)
chr4 (703-819)||(52477719-52477835)
chr4 (696-820)||(53535467-53535591)
chr4 (704-818)||(7402759-7402873)
chr4 (697-818)||(42711501-42711619)
chr4 (703-819)||(15807730-15807844)
chr4 (724-820)||(24250372-24250468)
chr4 (722-818)||(53779034-53779130)
chr4 (724-799)||(6220784-6220859)
chr4 (719-818)||(42712000-42712099)
chr4 (724-810)||(48614325-48614411)
chr4 (696-818)||(51162781-51162903)
chr4 (190-272)||(53116549-53116631)
chr4 (732-820)||(7402079-7402167)
chr4 (731-790)||(12659045-12659103)
chr4 (711-818)||(49863935-49864042)
chr4 (703-820)||(15808348-15808466)
chr4 (720-818)||(24251073-24251171)
chr4 (704-786)||(47848729-47848811)
chr4 (772-818)||(31971297-31971343)
chr4 (720-818)||(39263718-39263816)
chr4 (541-610)||(53110239-53110307)
chr4 (723-819)||(46620104-46620200)
chr4 (772-820)||(47865160-47865208)
chr4 (766-818)||(51162396-51162448)
chr4 (775-818)||(54109566-54109609)
chr4 (711-789)||(47848293-47848371)
chr4 (626-676)||(54110495-54110545)
chr4 (766-818)||(52503383-52503435)
chr4 (723-818)||(6242760-6242855)
chr4 (723-818)||(6710534-6710629)
chr4 (751-818)||(6823861-6823927)
chr4 (779-818)||(53118924-53118963)
chr4 (722-800)||(37706511-37706589)
chr4 (124-166)||(53112584-53112626)
chr4 (149-187)||(53116857-53116895)
chr4 (715-752)||(16836806-16836843)
chr4 (724-789)||(39264247-39264312)
[»] chr1 (45 HSPs)
chr1 (695-825)||(29373819-29373949)
chr1 (695-819)||(7649704-7649828)
chr1 (723-817)||(39841169-39841262)
chr1 (724-817)||(46046507-46046600)
chr1 (724-825)||(1743306-1743407)
chr1 (715-818)||(49057498-49057601)
chr1 (711-817)||(45916227-45916332)
chr1 (719-800)||(4583418-4583499)
chr1 (720-818)||(23350825-23350923)
chr1 (695-819)||(36005754-36005878)
chr1 (720-820)||(46728027-46728127)
chr1 (724-793)||(30856792-30856861)
chr1 (722-818)||(22506813-22506909)
chr1 (695-818)||(39025442-39025565)
chr1 (720-818)||(23351511-23351609)
chr1 (696-818)||(37910605-37910726)
chr1 (696-820)||(19439139-19439263)
chr1 (714-818)||(28650273-28650377)
chr1 (722-818)||(44870321-44870417)
chr1 (767-818)||(4954412-4954463)
chr1 (723-782)||(43380441-43380500)
chr1 (722-817)||(49058091-49058186)
chr1 (720-818)||(4584208-4584306)
chr1 (696-818)||(39840581-39840703)
chr1 (766-819)||(4062427-4062480)
chr1 (727-818)||(51993516-51993607)
chr1 (759-818)||(4029671-4029730)
chr1 (711-786)||(30984051-30984126)
chr1 (723-818)||(39958095-39958190)
chr1 (720-818)||(5567251-5567349)
chr1 (720-818)||(44598528-44598626)
chr1 (720-818)||(45915597-45915695)
chr1 (759-820)||(39972154-39972215)
chr1 (695-764)||(51466386-51466454)
chr1 (695-750)||(50126384-50126439)
chr1 (766-820)||(21080909-21080963)
chr1 (720-818)||(22506232-22506330)
chr1 (759-820)||(44503290-44503352)
chr1 (777-818)||(29373280-29373321)
chr1 (720-752)||(19438671-19438703)
chr1 (724-787)||(5567805-5567868)
chr1 (776-818)||(48233038-48233080)
chr1 (776-818)||(48238078-48238120)
chr1 (782-815)||(272924-272957)
chr1 (720-789)||(21080469-21080538)
[»] chr3 (52 HSPs)
chr3 (695-819)||(43656084-43656208)
chr3 (723-820)||(41354645-41354742)
chr3 (720-825)||(42488531-42488636)
chr3 (711-820)||(12216712-12216821)
chr3 (724-825)||(42121064-42121165)
chr3 (722-820)||(35325632-35325730)
chr3 (720-817)||(54294285-54294382)
chr3 (704-820)||(44527216-44527332)
chr3 (720-818)||(9175609-9175707)
chr3 (711-817)||(39452052-39452158)
chr3 (721-818)||(1984939-1985036)
chr3 (711-820)||(39617729-39617838)
chr3 (696-820)||(15951382-15951506)
chr3 (714-818)||(39452641-39452745)
chr3 (695-818)||(17527101-17527224)
chr3 (723-818)||(21102697-21102792)
chr3 (731-818)||(37737524-37737611)
chr3 (697-820)||(44878857-44878980)
chr3 (704-819)||(52935760-52935874)
chr3 (720-818)||(12216185-12216283)
chr3 (696-786)||(53427872-53427962)
chr3 (724-794)||(54280949-54281019)
chr3 (696-820)||(44706978-44707102)
chr3 (696-815)||(17527558-17527676)
chr3 (723-820)||(31090767-31090864)
chr3 (723-811)||(48045517-48045605)
chr3 (695-818)||(27843704-27843827)
chr3 (696-815)||(41780267-41780386)
chr3 (731-817)||(35325097-35325183)
chr3 (696-816)||(25913234-25913350)
chr3 (772-820)||(25166043-25166091)
chr3 (724-820)||(27843211-27843307)
chr3 (723-818)||(41779823-41779918)
chr3 (724-818)||(37736888-37736982)
chr3 (696-818)||(39185343-39185464)
chr3 (725-818)||(36006-36099)
chr3 (695-812)||(21103201-21103318)
chr3 (723-820)||(23485594-23485691)
chr3 (724-796)||(8482453-8482525)
chr3 (720-820)||(15445084-15445183)
chr3 (724-820)||(41354506-41354602)
chr3 (703-819)||(25166609-25166731)
chr3 (698-789)||(31091231-31091322)
chr3 (696-818)||(8481991-8482112)
chr3 (695-752)||(23143456-23143513)
chr3 (723-820)||(43655432-43655529)
chr3 (724-820)||(11058311-11058407)
chr3 (696-750)||(23486077-23486132)
chr3 (720-818)||(3990721-3990819)
chr3 (766-816)||(26051611-26051661)
chr3 (780-818)||(48045055-48045093)
chr3 (724-818)||(54281561-54281655)
[»] chr2 (36 HSPs)
chr2 (695-818)||(28784687-28784810)
chr2 (724-815)||(2076280-2076371)
chr2 (696-825)||(2214900-2215033)
chr2 (703-819)||(2238690-2238806)
chr2 (703-819)||(28916973-28917089)
chr2 (720-818)||(1907356-1907454)
chr2 (724-819)||(27352607-27352702)
chr2 (720-818)||(15272215-15272313)
chr2 (695-812)||(39475470-39475587)
chr2 (697-825)||(25455856-25455982)
chr2 (696-818)||(8873754-8873875)
chr2 (696-820)||(22277087-22277211)
chr2 (724-817)||(44075932-44076025)
chr2 (696-800)||(22386955-22387059)
chr2 (731-819)||(35907462-35907550)
chr2 (703-820)||(2238057-2238175)
chr2 (703-820)||(28916360-28916478)
chr2 (720-818)||(35421111-35421209)
chr2 (695-816)||(11735658-11735779)
chr2 (724-813)||(26240890-26240979)
chr2 (749-825)||(914744-914820)
chr2 (723-818)||(35908296-35908391)
chr2 (703-820)||(29090965-29091083)
chr2 (720-817)||(1906724-1906821)
chr2 (723-764)||(5429721-5429762)
chr2 (696-820)||(22386431-22386556)
chr2 (723-819)||(28783899-28783995)
chr2 (724-786)||(15993841-15993903)
chr2 (695-789)||(19281793-19281887)
chr2 (724-818)||(41916997-41917091)
chr2 (723-800)||(80703-80780)
chr2 (777-818)||(1907324-1907365)
chr2 (731-787)||(29359388-29359444)
chr2 (759-820)||(9276957-9277019)
chr2 (722-820)||(24558936-24559034)
chr2 (696-750)||(26240532-26240586)
[»] chr5 (39 HSPs)
chr5 (724-819)||(19432410-19432505)
chr5 (697-820)||(40372285-40372407)
chr5 (723-825)||(19825411-19825513)
chr5 (724-825)||(6895061-6895162)
chr5 (704-818)||(24051606-24051719)
chr5 (695-818)||(13911239-13911362)
chr5 (695-818)||(38913821-38913943)
chr5 (720-825)||(9189344-9189449)
chr5 (724-819)||(40567232-40567327)
chr5 (695-781)||(31558942-31559026)
chr5 (723-820)||(26710747-26710844)
chr5 (723-820)||(26980483-26980580)
chr5 (721-818)||(8894067-8894163)
chr5 (723-786)||(8430653-8430716)
chr5 (724-796)||(29096918-29096990)
chr5 (720-818)||(1665480-1665578)
chr5 (724-818)||(4808519-4808613)
chr5 (696-817)||(29627001-29627122)
chr5 (751-825)||(39083588-39083662)
chr5 (717-818)||(13911530-13911631)
chr5 (703-820)||(31023661-31023778)
chr5 (722-787)||(35151672-35151737)
chr5 (724-816)||(2320283-2320375)
chr5 (695-818)||(38914148-38914268)
chr5 (703-818)||(35989451-35989566)
chr5 (766-820)||(2046608-2046662)
chr5 (699-752)||(29626572-29626625)
chr5 (724-764)||(3099009-3099049)
chr5 (766-818)||(15795595-15795647)
chr5 (625-681)||(29096823-29096879)
chr5 (629-676)||(6895212-6895259)
chr5 (632-679)||(19432552-19432599)
chr5 (768-818)||(1040748-1040798)
chr5 (759-816)||(7600896-7600954)
chr5 (768-818)||(9189025-9189075)
chr5 (768-818)||(10091419-10091469)
chr5 (772-825)||(32693934-32693987)
chr5 (777-818)||(32694482-32694523)
chr5 (777-818)||(40366407-40366448)
[»] chr8 (53 HSPs)
chr8 (723-817)||(41723304-41723398)
chr8 (720-818)||(23154179-23154277)
chr8 (727-825)||(30136196-30136294)
chr8 (704-818)||(31618080-31618194)
chr8 (727-825)||(40575727-40575825)
chr8 (724-817)||(11596442-11596535)
chr8 (724-825)||(38938309-38938410)
chr8 (695-818)||(5875626-5875749)
chr8 (695-785)||(42094954-42095042)
chr8 (695-820)||(37321785-37321909)
chr8 (723-819)||(40142547-40142643)
chr8 (696-818)||(13388873-13388995)
chr8 (720-818)||(39528952-39529050)
chr8 (697-818)||(39529433-39529555)
chr8 (723-820)||(10499952-10500049)
chr8 (726-818)||(3809492-3809584)
chr8 (722-818)||(16472386-16472482)
chr8 (722-818)||(16476957-16477053)
chr8 (724-820)||(30427177-30427273)
chr8 (697-816)||(5340415-5340534)
chr8 (704-818)||(23153623-23153737)
chr8 (724-825)||(7600936-7601036)
chr8 (703-820)||(9122995-9123112)
chr8 (704-818)||(8390897-8391012)
chr8 (696-818)||(15224818-15224938)
chr8 (724-818)||(30328775-30328869)
chr8 (695-820)||(5339933-5340058)
chr8 (723-819)||(10500427-10500523)
chr8 (724-820)||(15225294-15225390)
chr8 (696-820)||(23404320-23404443)
chr8 (703-818)||(11761615-11761730)
chr8 (768-818)||(1982574-1982624)
chr8 (768-818)||(3809015-3809065)
chr8 (723-825)||(13388465-13388567)
chr8 (722-819)||(17132608-17132705)
chr8 (697-750)||(23404869-23404922)
chr8 (724-800)||(24700517-24700593)
chr8 (731-818)||(8977594-8977681)
chr8 (724-787)||(36186576-36186639)
chr8 (723-818)||(37727510-37727604)
chr8 (724-787)||(43937966-43938028)
chr8 (724-818)||(36187049-36187142)
chr8 (768-818)||(37727811-37727861)
chr8 (725-818)||(25211588-25211681)
chr8 (766-818)||(1939591-1939643)
chr8 (726-818)||(7824783-7824875)
chr8 (766-818)||(9899524-9899576)
chr8 (724-820)||(32637775-32637871)
chr8 (767-817)||(14445375-14445425)
chr8 (696-750)||(24701064-24701118)
chr8 (622-676)||(40784799-40784853)
chr8 (722-751)||(1983071-1983100)
chr8 (777-818)||(26636129-26636170)
[»] chr6 (22 HSPs)
chr6 (710-820)||(21633717-21633827)
chr6 (718-813)||(29856625-29856720)
chr6 (703-819)||(24051864-24051980)
chr6 (696-817)||(476989-477109)
chr6 (720-815)||(29844360-29844455)
chr6 (720-818)||(21634226-21634324)
chr6 (703-820)||(29979091-29979209)
chr6 (714-818)||(17416672-17416777)
chr6 (710-820)||(24051337-24051448)
chr6 (696-818)||(1174973-1175094)
chr6 (720-818)||(1823003-1823101)
chr6 (720-818)||(5956031-5956129)
chr6 (724-819)||(16706249-16706344)
chr6 (696-818)||(31170731-31170853)
chr6 (767-818)||(477517-477568)
chr6 (749-800)||(544459-544509)
chr6 (703-818)||(9699026-9699141)
chr6 (759-818)||(22353137-22353197)
chr6 (768-815)||(29843877-29843924)
chr6 (723-818)||(34730033-34730128)
chr6 (759-820)||(18493570-18493632)
chr6 (781-818)||(14350776-14350813)
[»] chr7 (42 HSPs)
chr7 (696-825)||(26828830-26828959)
chr7 (724-825)||(44477855-44477956)
chr7 (700-786)||(41345336-41345423)
chr7 (724-818)||(7945425-7945519)
chr7 (723-825)||(24699305-24699407)
chr7 (703-819)||(23966390-23966506)
chr7 (704-825)||(38086207-38086328)
chr7 (723-819)||(4706729-4706825)
chr7 (724-818)||(25608992-25609086)
chr7 (695-820)||(26585541-26585666)
chr7 (724-784)||(34457405-34457465)
chr7 (696-820)||(42276597-42276721)
chr7 (695-818)||(48540608-48540730)
chr7 (696-820)||(41567402-41567525)
chr7 (727-818)||(6822702-6822793)
chr7 (724-818)||(12782857-12782951)
chr7 (695-817)||(16779665-16779786)
chr7 (723-793)||(40193954-40194023)
chr7 (768-818)||(43210588-43210638)
chr7 (772-820)||(4707333-4707381)
chr7 (696-752)||(21985512-21985568)
chr7 (766-820)||(28763113-28763167)
chr7 (720-818)||(44372482-44372580)
chr7 (720-818)||(44381338-44381436)
chr7 (723-819)||(46196621-46196706)
chr7 (695-764)||(32497068-32497137)
chr7 (723-800)||(39459103-39459180)
chr7 (724-820)||(40194530-40194626)
chr7 (720-818)||(38085649-38085748)
chr7 (766-820)||(3842650-3842704)
chr7 (696-750)||(11337648-11337702)
chr7 (696-750)||(41567860-41567914)
chr7 (766-820)||(46468237-46468291)
chr7 (766-819)||(20016615-20016668)
chr7 (713-750)||(35088970-35089007)
chr7 (704-820)||(43210212-43210329)
chr7 (724-800)||(28763463-28763539)
chr7 (766-818)||(46468636-46468688)
chr7 (777-820)||(11337183-11337226)
chr7 (772-818)||(35088516-35088562)
chr7 (777-818)||(34456806-34456847)
chr7 (777-822)||(48540155-48540200)
[»] scaffold0237 (3 HSPs)
scaffold0237 (718-815)||(2825-2922)
scaffold0237 (718-815)||(564-661)
scaffold0237 (768-815)||(2561-2608)
[»] scaffold0141 (2 HSPs)
scaffold0141 (703-819)||(11007-11123)
scaffold0141 (772-820)||(10451-10499)
[»] scaffold1636 (1 HSPs)
scaffold1636 (724-800)||(1436-1512)
[»] scaffold0187 (1 HSPs)
scaffold0187 (696-818)||(28351-28472)
[»] scaffold0100 (2 HSPs)
scaffold0100 (715-820)||(35135-35240)
scaffold0100 (769-818)||(34661-34710)
[»] scaffold0014 (2 HSPs)
scaffold0014 (695-785)||(135549-135639)
scaffold0014 (721-750)||(135934-135963)
[»] scaffold0785 (1 HSPs)
scaffold0785 (723-820)||(975-1071)
[»] scaffold0071 (1 HSPs)
scaffold0071 (720-820)||(17010-17109)
[»] scaffold0274 (1 HSPs)
scaffold0274 (777-818)||(912-953)


Alignment Details
Target: chr4 (Bit Score: 562; Significance: 0; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 562; E-Value: 0
Query Start/End: Original strand, 9 - 685
Target Start/End: Complemental strand, 53120257 - 53119575
Alignment:
Q  9 agaccaccttgaagatgtgtccgtgtctatggctggtagttagtctccggtttctatttcaacagttttgttttgtttgcggtggtctctcttgtgtagt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53120257 agaccaccttgaagatgtgtccgtgtctatggctggtagttagtctccggtttctatttcaacagttttgttttgtttgcggtggtctctcttgtgtagt 53120158  T
Q  109 tactaacttactctatatgttggtgctaattgtctttctacgtgttaggccgaattataaacaaagactcttcggatgcgaaggatatctgactttgatg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53120157 tactaacttactctatatgttggtgctaattgtctttctacgtgttaggccgaattataaacaaagactcttcggatgcgaaggatatctgacttggatg 53120058  T
Q  209 tggttgaatcttgattattccattctactgtggaactaggtgacactgttggcgtcattggattcgaaacgcatggtactgagaaaatgttagcgtgcag 308  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53120057 tggttgaattttgattattccattctactgtggaactaggtgacactgttggcgtcattggattcgaaacgcatggtactgagaaaatgttagcgtgcag 53119958  T
Q  309 tagcatgctgtattccttcannnnnnnnggtagtttggggtggggatcattagaaatggattgatatagaccaatgctaggcattttctatcactatttt 408  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  53119957 tagcatgctgtattccttca-tttttttggtagtttggggtggggatcattagaaatggattgatatagaccaatgctaggcatttcctatcactatttt 53119859  T
Q  409 gttgtatggttggcattgattttcctaattacctcgcaaaaataaaggtattgttattcataagcatatagatatttttaagtgaaatttgatgtttgag 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53119858 gttgtatggttggcattgattttcctaattacctcgcaaaaataaaggtattgttattcataagcatatagatatttttaagtgaaatttgatgtttgag 53119759  T
Q  509 cttaaactatgccatgcagtt--ttgattttct------gttttcccttttcaattttctgtttgctaatgtttgcacattgatttctattcaaaactga 600  Q
    ||||||||||||||||||  |  ||||| || |       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53119758 cttaaactatgccatgcacctgcttgatattatattaggattttcccttttcaattttctgtttgctaatgtttgcacattgatttctattcaaaactga 53119659  T
Q  601 acaaagaaaaccttaatcattattgaaaggtttaaatatgataatcgtacttgtaattggcttcagttttgatttttgttcttgt 685  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| |||||| ||||||||||||    
T  53119658 acaaagaaaaccttaatcattatttaaaggtttaaatatgataatcgttcctgtaattggattcaattttga-ttttgttcttgt 53119575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 358 - 622
Target Start/End: Complemental strand, 53115908 - 53115633
Alignment:
Q  358 ttagaaatggattgatatagaccaatgctaggcattttctatcactattttgttgtatggttggcattgattttcctaattacctcgcaaaaataaaggt 457  Q
    |||||||||||||||||||||| | |  |||| |||||||||||||||||||||||||| |||||||| ||||| |||||||| | ||||||||||||||    
T  53115908 ttagaaatggattgatatagacaattattaggaattttctatcactattttgttgtatgattggcattcatttttctaattactttgcaaaaataaaggt 53115809  T
Q  458 a---ttgttattcataagcatatagatatttttaagtgaaatttgatgtttgagcttaaactatgccatgca--gttttgat------tttctgttttcc 546  Q
    |   ||||||||||||| ||||   |||| ||||||||||||||||||||| |||||| |||| ||||||||    || |||      ||    ||||||    
T  53115808 actgttgttattcataaccataagaatatatttaagtgaaatttgatgtttaagcttacactaggccatgcacctgttagataatatattaggattttcc 53115709  T
Q  547 cttttcaattttctgtttgctaatgtttgcacattgatttctattcaaaactgaacaaagaaaaccttaatcatta 622  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  53115708 ctttccaattttctgtttgctaaagtttgcacattgatttctattcaaaattgaacaaaaaaaaccttaattatta 53115633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 724 - 825
Target Start/End: Original strand, 6056505 - 6056606
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||| |||    
T  6056505 ttgtttgaaaaaggtctctgaccccactattcagctgattttgcattgttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcgtgcc 6056604  T
Q  824 ac 825  Q
    ||    
T  6056605 ac 6056606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 711 - 825
Target Start/End: Complemental strand, 53119577 - 53119463
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgc 810  Q
    ||||| || ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| || ||||||    
T  53119577 tgtaattttttttttgtttgaaaaagctctctggcctcactattcagctgatttggcatggttttgaccacgtggcagctgctgactgtgcaacttttgc 53119478  T
Q  811 cacgtggcgcgccac 825  Q
    |||||||||||||||    
T  53119477 cacgtggcgcgccac 53119463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 724 - 825
Target Start/End: Original strand, 32131642 - 32131743
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||| |||    
T  32131642 ttgtttgaaaaaggtctctgaccccactattcagctgatttggcatggttttggccacgtggcagttgctgactatgcaacttttgccacgtggcgtgcc 32131741  T
Q  824 ac 825  Q
    ||    
T  32131742 ac 32131743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 698 - 825
Target Start/End: Complemental strand, 866263 - 866133
Alignment:
Q  698 tgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccacta---ttcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||||||| |||||| || |||||||||||||||||||| ||||||||||||   |||||||||||| | |||||||||||||||||||||||||||    
T  866263 tgaaatacatccctgtaattttttttttgtttgaaaaaggtccctggccccactactattcagctgatttggaatggttttggccacgtggcagttgctg 866164  T
Q  795 actgtgtaagttttgccacgtggcgcgccac 825  Q
    ||| || || ||||||||||||||| |||||    
T  866163 actttgcaacttttgccacgtggcgtgccac 866133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 724 - 825
Target Start/End: Complemental strand, 9170655 - 9170554
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||| |||    
T  9170655 ttgtttgaaaaaggtctttggctccactattcagctgatttggcatggttttggccacgtggcagttcctgactgtgcaacttttgccacgtggcgtgcc 9170556  T
Q  824 ac 825  Q
    ||    
T  9170555 ac 9170554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 724 - 825
Target Start/End: Complemental strand, 29144813 - 29144712
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    |||||||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||    
T  29144813 ttgtttgaaaaaggtccctgaccccactattcagctaatttggcatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcgtgcc 29144714  T
Q  824 ac 825  Q
    ||    
T  29144713 ac 29144712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 696 - 819
Target Start/End: Complemental strand, 572161 - 572038
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||||||||| |||||| |  |||||||||||||||||||| ||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  572161 tttgaaatacatccctgtaattctttttttgtttgaaaaaggtccctgaccccactattcagcttatttgacatggttttggccacgtggcagttgctga 572062  T
Q  796 ctgtgtaagttttgccacgtggcg 819  Q
    || || || |||| ||| ||||||    
T  572061 ctatgcaacttttcccatgtggcg 572038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 724 - 825
Target Start/End: Complemental strand, 44876820 - 44876719
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    ||||||||||||| | |||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||||||| || ||||||||||||||| |||    
T  44876820 ttgtttgaaaaagatatctggctccactattcagctgatttgacatggttttgaccacgtggcagttgctgactgtgcaacttttgccacgtggcgtgcc 44876721  T
Q  824 ac 825  Q
    ||    
T  44876720 ac 44876719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 711 - 818
Target Start/End: Complemental strand, 55593357 - 55593250
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgc 810  Q
    |||||| | |||||||||| ||||||||| ||| ||||||||||||| | |  | |||||||||||||||||||||||||||||| |||| || ||||||    
T  55593357 tgtaaaatgttttttgttttaaaaaggtccctgaccccactattcagttaaagtggcatggttttggccacgtggcagttgctgattgtgcaacttttgc 55593258  T
Q  811 cacgtggc 818  Q
    ||||||||    
T  55593257 cacgtggc 55593250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 362 - 468
Target Start/End: Complemental strand, 53110487 - 53110381
Alignment:
Q  362 aaatggattgatatagaccaatgctaggcattttctatcactattttgttgtatggttggcattgattttcctaattacctcgcaaaaataaaggtattg 461  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||| |||||||| ||||||||||||     |||||||| ||| |||||    
T  53110487 aaatggattgatatagaccaatactaggcattttctctcactattatgtagtatgattggcattcattttcctaattgtgctgcaaaaatgaagttattg 53110388  T
Q  462 ttattca 468  Q
    |||||||    
T  53110387 ttattca 53110381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 704 - 816
Target Start/End: Original strand, 31970813 - 31970925
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaa 803  Q
    ||||| ||| ||||| |||||||||| ||||||||| ||| || |||||||||| |||  |  ||||||||||||||||||||||||||||||| || ||    
T  31970813 acatccctgcaaatttttttttgttttaaaaaggtccctgccctcactattcagttgaagtgacatggttttggccacgtggcagttgctgactttgcaa 31970912  T
Q  804 gttttgccacgtg 816  Q
     ||||||||||||    
T  31970913 cttttgccacgtg 31970925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 703 - 819
Target Start/End: Original strand, 47864564 - 47864680
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| |||||||  | ||||||||| ||||||||| |||||||||||     | |||||| ||| ||||||||||||||||||||||||||||||| |    
T  47864564 tacatccctgtaaaaaaatttttgttttaaaaaggtccctggccccacttcattggtgatttggcaaggttttggccacgtggcagttgctgactgtgca 47864663  T
Q  803 agttttgccacgtggcg 819  Q
    | |||||||||||||||    
T  47864664 acttttgccacgtggcg 47864680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 703 - 819
Target Start/End: Original strand, 52477719 - 52477835
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| |||||||  | ||||||||| ||||||||| |||||||||||     | |||||| ||| ||||||||||||||||||||||||||||||| |    
T  52477719 tacatccctgtaaaaaaatttttgttttaaaaaggtccctggccccacttcattggtgatttggcaaggttttggccacgtggcagttgctgactgtgca 52477818  T
Q  803 agttttgccacgtggcg 819  Q
    | |||||||||||||||    
T  52477819 acttttgccacgtggcg 52477835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 696 - 820
Target Start/End: Complemental strand, 53535591 - 53535467
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||||||||| ||||||||||||||| |||| ||||||||||  ||  | |||| | |||||| ||| |||||||||||||||||||    
T  53535591 tttgaaaaacatccctgtaaatttttttttgtttgaaaacggtccctggccccacatttttgatgatatggcatgggttttgccacgtggcagttgctga 53535492  T
Q  796 ctgtgtaagttttgccacgtggcgc 820  Q
    ||||| || || | |||||||||||    
T  53535491 ctgtgcaacttctaccacgtggcgc 53535467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 704 - 818
Target Start/End: Complemental strand, 7402873 - 7402759
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaa 803  Q
    ||||| ||| ||||| |||||||||| ||||||||| ||| ||||||| ||  |||||  | | |||| |||||||||||||||||||||||||||| ||    
T  7402873 acatccctgcaaatttttttttgtttcaaaaaggtccctgaccccacttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcaa 7402774  T
Q  804 gttttgccacgtggc 818  Q
     ||||||||||||||    
T  7402773 cttttgccacgtggc 7402759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 697 - 818
Target Start/End: Original strand, 42711501 - 42711619
Alignment:
Q  697 ttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgac 796  Q
    |||||| ||||| |||||||  ||||||||||||||||||||| ||||||||||| ||  |||||  | | ||| ||||||||| |||||||||||||||    
T  42711501 ttgaaaaacatccctgtaaa--attttttgtttgaaaaaggtccctggccccacttttttgctgacatggtatg-ttttggccatgtggcagttgctgac 42711597  T
Q  797 tgtgtaagttttgccacgtggc 818  Q
    |||| || ||||||||||||||    
T  42711598 tgtgcaacttttgccacgtggc 42711619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 703 - 819
Target Start/End: Original strand, 15807730 - 15807844
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| |||||||||  ||||||||| ||||||||| ||||||||| |     | |||||| ||| ||||||||||||||||||||||||||||||| |    
T  15807730 tacatccctgtaaatt--tttttgttttaaaaaggtccctggccccatttccttggtgatttggcaaggttttggccacgtggcagttgctgactgtgca 15807827  T
Q  803 agttttgccacgtggcg 819  Q
    | |||||||||||||||    
T  15807828 acttttgccacgtggcg 15807844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 724 - 820
Target Start/End: Original strand, 24250372 - 24250468
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||| ||||| ||| ||||||| |||||| || |||  | |||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  24250372 ttgttttaaaaaagtcactggcccaactattaagttgaagtggcatggttttggccacgtggcagttgctgattgtgcaacttttgccacgtggcgc 24250468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 722 - 818
Target Start/End: Complemental strand, 53779130 - 53779034
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||| |||||||||  || ||||||||||||| |||  | |||||||||| |||||||||||||||||||||||| || |||||||| |||||    
T  53779130 ttttgttttaaaaaggtcattgaccccactattcagttgaagtggcatggttttagccacgtggcagttgctgactgtgcaacttttgccaggtggc 53779034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 6220784 - 6220859
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgt 799  Q
    ||||||||||| |||| ||||| ||||||||||||||||||  |||||||||||||||||| ||||| ||||||||    
T  6220784 ttgtttgaaaagggtcactggctccactattcagctgatttgacatggttttggccacgtgacagtttctgactgt 6220859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 719 - 818
Target Start/End: Complemental strand, 42712099 - 42712000
Alignment:
Q  719 attttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||||||| |||||||||||    | ||||||| |||| |||||  ||| ||||||||||||||||||| || ||||||||||||||    
T  42712099 attttttgtttgaaaaaggtccctggccccacttccgatctgatttggcattgtttttaccatgtggcagttgctgactgtgcaacttttgccacgtggc 42712000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 724 - 810
Target Start/End: Original strand, 48614325 - 48614411
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgc 810  Q
    ||||||||||| |||| ||| | |||||||||||||||  |  |||||||||||||||||||||||||||||||||| || ||||||    
T  48614325 ttgtttgaaaatggtccctgactccactattcagctgaagtgacatggttttggccacgtggcagttgctgactgtgcaacttttgc 48614411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 696 - 818
Target Start/End: Complemental strand, 51162903 - 51162781
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| |||| |||| |||||| ||||||||||||| ||| ||||||  ||  | |||| | |||||| ||| |||||||||||||||||||    
T  51162903 tttgaaaaacatccctgtcaatttttttttttttgaaaaaggtccctgaccccacatttttgatgatatggcatgggttttgccacgtggcagttgctga 51162804  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  51162803 ctgtgcaacttctgccacgtggc 51162781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 53116631 - 53116549
Alignment:
Q  190 aggatatctgactttgatgtggttgaatcttgattattccattctactgtggaactaggtgacactgttggcgtcattggatt 272  Q
    |||||||| ||||| |||| |||||||| |||   |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  53116631 aggatatccgacttggatgaggttgaattttgcaaattccattctactgtggaacgaggtgacactgttggtgtcattggatt 53116549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 732 - 820
Target Start/End: Original strand, 7402079 - 7402167
Alignment:
Q  732 aaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||| ||| |||||||||| || |||  | |||||||||| |||||||||||||||||||| ||| || ||||||||||||||||    
T  7402079 aaaaggtccctgaccccactattgagttgaagtggcatggtttttgccacgtggcagttgctgacggtgcaacttttgccacgtggcgc 7402167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 731 - 790
Target Start/End: Complemental strand, 12659103 - 12659045
Alignment:
Q  731 aaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagtt 790  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  12659103 aaaaaggtctctggccccactat-cagcttatttggcatggttttggccacgtggcagtt 12659045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 711 - 818
Target Start/End: Complemental strand, 49864042 - 49863935
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagct--gattttgcatggttttggccacgtggcagttgctgactgtgtaagtttt 808  Q
    ||||| || |||||||||| ||||||||  |||||||||||  |||| |  ||||| |||||||||||| || ||||||||||||||||||| || ||||    
T  49864042 tgtaattttttttttgttttaaaaaggttcctggccccact--tcagttatgatttagcatggttttggtcaggtggcagttgctgactgtgcaactttt 49863945  T
Q  809 gccacgtggc 818  Q
    ||||||||||    
T  49863944 gccacgtggc 49863935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 703 - 820
Target Start/End: Complemental strand, 15808466 - 15808348
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggtttt-ggccacgtggcagttgctgactgtgt 801  Q
    |||||| ||||||| | |||||||||| ||||||||| |||||||||||   | | |||| | |||   |||| |||||||||||||||||||||||||     
T  15808466 tacatccctgtaaaattttttttgttttaaaaaggtccctggccccacttcgctggtgatgtggcaacatttttggccacgtggcagttgctgactgtgc 15808367  T
Q  802 aagttttgccacgtggcgc 820  Q
    || ||||||||||||||||    
T  15808366 aacttttgccacgtggcgc 15808348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 24251171 - 24251073
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||| ||||||| ||  |||||  | | |||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  24251171 ttttttgtttcaaaaaggtccctgaccccacttttttgctgacatgggatggctttggccacgtggcagttgctgaatgtgcaacttttgccacgtggc 24251073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 704 - 786
Target Start/End: Complemental strand, 47848811 - 47848729
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggc 786  Q
    ||||| |||||| || |||||||||| |||||| || ||||||||||||||||| |||  | |||||||||||||||||||||    
T  47848811 acatccctgtaattttttttttgttttaaaaagatccctggccccactattcaggtgaagtggcatggttttggccacgtggc 47848729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 772 - 818
Target Start/End: Complemental strand, 31971343 - 31971297
Alignment:
Q  772 ttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  31971343 ttttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 31971297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 39263718 - 39263816
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||| ||||| || |||||||    | ||||||| |||| ||||| ||||||||||| |||||||||||| || |||| |||||||||    
T  39263718 ttttttgtttgaaaatggtctttgaccccacttccgatctgatttggcattgtttttgccacgtggcaattgctgactgtgcaacttttaccacgtggc 39263816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 541 - 610
Target Start/End: Complemental strand, 53110307 - 53110239
Alignment:
Q  541 ttttcccttttcaattttctgtttgctaatgtttgcacattgatttctattcaaaactgaacaaagaaaa 610  Q
    ||||||||||||||||| ||||| |||||  ||||||| ||||||||||||||| | |||||||||||||    
T  53110307 ttttcccttttcaattt-ctgttcgctaaaatttgcacgttgatttctattcaatattgaacaaagaaaa 53110239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 819
Target Start/End: Complemental strand, 46620200 - 46620104
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||||||||| ||||||||||  ||    |||| | |||||  ||| |||||||||||||||||||||||| || || ||||||||||||    
T  46620200 tttgtttgaaaaaggtccctggccccacattttttatgatatggcatgagttttgccacgtggcagttgctgactgtgcaacttctgccacgtggcg 46620104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 772 - 820
Target Start/End: Complemental strand, 47865208 - 47865160
Alignment:
Q  772 ttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||||    
T  47865208 ttttggccacgtggcagttgctaactgtgcaacttttgccacgtggcgc 47865160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 766 - 818
Target Start/End: Original strand, 51162396 - 51162448
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| |||||||||||||||||||||||| || || |||||||||||    
T  51162396 gcatggtttttgccacgtggcagttgctgactgtgcaacttatgccacgtggc 51162448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 818
Target Start/End: Original strand, 54109566 - 54109609
Alignment:
Q  775 tggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||||||||| || ||||||||||||||    
T  54109566 tggccacgtggcagttgctgactgtgcaatttttgccacgtggc 54109609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 789
Target Start/End: Original strand, 47848293 - 47848371
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagt 789  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||  |||||  | | |||  |||||||||||||||||    
T  47848293 tgtaaatttttttttgttttaaaaaggtctctggccccacttttttgctgacatgggatgactttggccacgtggcagt 47848371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 626 - 676
Target Start/End: Complemental strand, 54110545 - 54110495
Alignment:
Q  626 aaaggtttaaatatgataatcgtacttgtaattggcttcagttttgatttt 676  Q
    ||||||||||||||||||||||| | ||||||| | |||||||||||||||    
T  54110545 aaaggtttaaatatgataatcgtccctgtaatttgtttcagttttgatttt 54110495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 818
Target Start/End: Complemental strand, 52503435 - 52503383
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||| |||||||||||||||||||||||| || || |||||||||||    
T  52503435 gcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtggc 52503383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 818
Target Start/End: Complemental strand, 6242855 - 6242760
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||| ||||||||| ||| ||||||| ||  |||||  | | |||  ||||||||||||||||||| ||||||||  | ||||||||||||||    
T  6242855 tttgttttaaaaaggtccctgaccccacttttttgctgacatgggatgactttggccacgtggcagttgttgactgtgcgacttttgccacgtggc 6242760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 818
Target Start/End: Original strand, 6710534 - 6710629
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||| |||| ||  ||||||| ||  |||||  | | ||||||||||||| |||||||||||||| |||| || ||||||||| ||||    
T  6710534 tttgtttgaaaatggtccctaaccccacttttttgctgacatggtatggttttggccatgtggcagttgctgattgtgcaacttttgccacatggc 6710629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 751 - 818
Target Start/End: Complemental strand, 6823927 - 6823861
Alignment:
Q  751 tattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||| || ||||||||||||||||||||||  |||||| |||| |  ||||||||||||||    
T  6823927 tattcagctgagttggcatggttttggccacgtggca-atgctgattgtgcagcttttgccacgtggc 6823861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 779 - 818
Target Start/End: Original strand, 53118924 - 53118963
Alignment:
Q  779 cacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  53118924 cacgtggcagttgctgactgtgcaacttttgccacgtggc 53118963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 722 - 800
Target Start/End: Complemental strand, 37706589 - 37706511
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    ||||||||||||||||||  |||||||||||    | |||  |  ||||||||| ||||||||||||||||||||||||    
T  37706589 ttttgtttgaaaaaggtccttggccccactaaaatgttgaagtgacatggtttttgccacgtggcagttgctgactgtg 37706511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 53112626 - 53112584
Alignment:
Q  124 tatgttggtgctaattgtctttctacgtgttaggccgaattat 166  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||    
T  53112626 tatgttgatgctaatcgtctttctgcgtgttaggccgaattat 53112584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 187
Target Start/End: Complemental strand, 53116895 - 53116857
Alignment:
Q  149 cgtgttaggccgaattataaacaaagactcttcggatgc 187  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  53116895 cgtgttaggccaaattatgaacaaagactcttcggatgc 53116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 715 - 752
Target Start/End: Complemental strand, 16836843 - 16836806
Alignment:
Q  715 aattattttttgtttgaaaaaggtctctggccccacta 752  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  16836843 aatttttttttgtttgaaaaaggtccctggccccacta 16836806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 724 - 789
Target Start/End: Complemental strand, 39264312 - 39264247
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagt 789  Q
    ||||||||||||||||  |||||||||| ||  |||||  | | ||||||||||||||||||||||    
T  39264312 ttgtttgaaaaaggtcaatggccccacttttttgctgacatggtatggttttggccacgtggcagt 39264247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 4e-41; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 695 - 825
Target Start/End: Complemental strand, 29373949 - 29373819
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||||||||| |||||| || || |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  29373949 ctttgaaatacatccctgtaattttttgtttgtttgaaaaaggtccatggccccactattcagctgatttggcatggttttggctacgtggcagttgctg 29373850  T
Q  795 actgtgtaagttttgccacgtggcgcgccac 825  Q
    |||||| || ||||||||||||||| |||||    
T  29373849 actgtgcaatttttgccacgtggcgtgccac 29373819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 695 - 819
Target Start/End: Complemental strand, 7649828 - 7649704
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  7649828 ctttgaaatacatccctgtaaaaaatattttgtttgaaaaagatctctggccccactattcagctgatttgccatgcttttggccacgtggcagttgctg 7649729  T
Q  795 actgtgtaagttttgccacgtggcg 819  Q
    |||||| || |||| ||||||||||    
T  7649728 actgtgcaatttttaccacgtggcg 7649704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 723 - 817
Target Start/End: Complemental strand, 39841262 - 39841169
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || || |||||||||||||    
T  39841262 tttgtttgaaaaaggtctctggccccactattcagctgatttggcat-gttttggccacgtggcagttgctgactatgcaacttttgccacgtgg 39841169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 724 - 817
Target Start/End: Original strand, 46046507 - 46046600
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    |||||||||||||||| ||||| ||||||||||| |||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  46046507 ttgtttgaaaaaggtccctggctccactattcaggtgatttggcatggttttggccacgttgcagttgctgactgtgcaacttttgccacgtgg 46046600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 724 - 825
Target Start/End: Original strand, 1743306 - 1743407
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| || ||||  |||||| || |||    
T  1743306 ttgtttgaaaaaggtctctgaccccactattcagctgatttggcatggttttgaccacgtagcagttgctgactgtgcaacttttctcacgtgacgtgcc 1743405  T
Q  824 ac 825  Q
    ||    
T  1743406 ac 1743407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 715 - 818
Target Start/End: Original strand, 49057498 - 49057601
Alignment:
Q  715 aattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacg 814  Q
    |||| |||||||||| ||||||||| ||||||| ||||||||| |||  | ||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  49057498 aatttttttttgttttaaaaaggtccctggccctactattcagttgaaatggcatggttttgtccacgtggcagttgctgactgtgcaacttttgccacg 49057597  T
Q  815 tggc 818  Q
    ||||    
T  49057598 tggc 49057601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 711 - 817
Target Start/End: Complemental strand, 45916332 - 45916227
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgc 810  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| || |||  | ||||||||||||||||||||||||| ||||||||| || ||||||    
T  45916332 tgtaaatt-ttttttgttttaaaaaggtccctggccccactatttagttgaagtggcatggttttggccacgtggcagtttctgactgtgcaacttttgc 45916234  T
Q  811 cacgtgg 817  Q
    |||||||    
T  45916233 cacgtgg 45916227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 719 - 800
Target Start/End: Original strand, 4583418 - 4583499
Alignment:
Q  719 attttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    |||||||||||||||| ||||||||||||||||||||||||||  | |||||| ||||||||||||| ||||||||||||||    
T  4583418 attttttgtttgaaaatggtctctggccccactattcagctgaagtggcatggctttggccacgtggtagttgctgactgtg 4583499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 23350825 - 23350923
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||||| ||||||||||| |||  | ||||||||||||||||||||| ||||||||||||| || ||||||||| ||||    
T  23350825 ttttttgttttaaaaaggtccctggctccactattcagttgaaatggcatggttttggccacgtggccgttgctgactgtgcaacttttgccacatggc 23350923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 695 - 819
Target Start/End: Complemental strand, 36005878 - 36005754
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||| || |||||| |||||||||||||||||||| ||||||||||  ||  | |||| | |||||| ||| ||||||||||||||||||    
T  36005878 ctttgaattacatctctataaattcttttttgtttgaaaaaggtccctggccccacatttttgatgatatggcatgggttttgccacgtggcagttgctg 36005779  T
Q  795 actgtgtaagttttgccacgtggcg 819  Q
    |||||| || || |||||| |||||    
T  36005778 actgtgcaacttctgccacatggcg 36005754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 720 - 820
Target Start/End: Original strand, 46728027 - 46728127
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||||||||||| |||||||  |||||||||||||||||||||||  ||||||||||||||||| ||||||| ||| |||| || ||||| || ||||||    
T  46728027 ttttttgtttgataaaggtccttggccccactattcagctgatttaacatggttttggccacgtagcagttgttgattgtgcaacttttgtcatgtggcg 46728126  T
Q  820 c 820  Q
    |    
T  46728127 c 46728127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 724 - 793
Target Start/End: Complemental strand, 30856861 - 30856792
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgct 793  Q
    ||||||||||||||||  | ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  30856861 ttgtttgaaaaaggtcattagccccactattcagctgatttggcatggttttggccacgtgacagttgct 30856792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 722 - 818
Target Start/End: Complemental strand, 22506909 - 22506813
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||| |||||| ||  ||| |||||||||||| |||  | |||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  22506909 ttttgttttaaaaagatccttgggcccactattcagttgaagtggcatggttttggccacgtggcagttgctgactatgcaacttttgccacgtggc 22506813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 695 - 818
Target Start/End: Original strand, 39025442 - 39025565
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagc--tgattttgcatggttttggccacgtggcagttgc 792  Q
    |||||||||||||| ||| |||   |||||||||||||||||||| |||||| ||||  ||| |  ||| || ||||||||||  |||||||||||||||    
T  39025442 ctttgaaatacatccctgcaaaaatttttttgtttgaaaaaggtccctggccacact--tcatcattgagttggcatggttttacccacgtggcagttgc 39025539  T
Q  793 tgactgtgtaagttttgccacgtggc 818  Q
    |||||||| || ||||||||||||||    
T  39025540 tgactgtgcaacttttgccacgtggc 39025565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 23351609 - 23351511
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||||||||||| ||  |||||  | | |||| ||||||||||||| |||||||||||||| || ||||||||||||||    
T  23351609 ttttttgttttaaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggtagttgctgactgtgcaacttttgccacgtggc 23351511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 696 - 818
Target Start/End: Complemental strand, 37910726 - 37910605
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| || || ||||||||| |||||||||||||||||||| ||||||||||  ||  | |||| | |||||| ||| ||||||||| |||||||||    
T  37910726 tttgaaaaacttccctgtaaatt-ttttttgtttgaaaaaggtccctggccccacatttttgatgatatggcatgggttttgccacgtggtagttgctga 37910628  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  37910627 ctgtgcaacttctgccacgtggc 37910605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 696 - 820
Target Start/End: Complemental strand, 19439263 - 19439139
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| |||||| || |||||||||||||||||||| ||||||||||  ||  | |||| | |||||| ||| |||| ||||||||||||||    
T  19439263 tttgaaaaacatccctgtaattttttttttgtttgaaaaaggtcactggccccacatttttgatgatatggcatgggttttgccatgtggcagttgctga 19439164  T
Q  796 ctgtgtaagttttgccacgtggcgc 820  Q
    || || || || ||| |||||||||    
T  19439163 ctatgcaacttctgctacgtggcgc 19439139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 714 - 818
Target Start/End: Complemental strand, 28650377 - 28650273
Alignment:
Q  714 aaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccac 813  Q
    ||||| |||||||||| ||||||||  ||||||||||| ||  |||||  | | |||| ||||||||||||| |||||||||||||| || |||||||||    
T  28650377 aaatttttttttgttttaaaaaggttcctggccccacttttttgctgacatgggatggctttggccacgtggtagttgctgactgtgcaacttttgccac 28650278  T
Q  814 gtggc 818  Q
    |||||    
T  28650277 gtggc 28650273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 722 - 818
Target Start/End: Original strand, 44870321 - 44870417
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||| ||||||||| ||||||| ||||||||| |||  |  ||||||||||||||| ||||||||| |||||||| || ||||||| ||||||    
T  44870321 ttttgttttaaaaaggtccctggccctactattcagttgaagtgacatggttttggccacatggcagttgttgactgtgcaacttttgccgcgtggc 44870417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 767 - 818
Target Start/End: Complemental strand, 4954463 - 4954412
Alignment:
Q  767 catggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  4954463 catggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 4954412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 723 - 782
Target Start/End: Complemental strand, 43380500 - 43380441
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacg 782  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||    
T  43380500 tttgtttgaaaaaggtctctagccccactattcagctgatttggcatgcttttggtcacg 43380441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 722 - 817
Target Start/End: Complemental strand, 49058186 - 49058091
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    |||||||| ||||||||| ||||| ||||| ||  |||||  | | |||| |||||||||||||||||||||||||||| || |||||||||||||    
T  49058186 ttttgttttaaaaaggtccctggctccacttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcaacttttgccacgtgg 49058091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 4584306 - 4584208
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagc--tgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    |||||||||||||||||||| | |||||||||  ||| |  ||| || ||||||||||| |||||||||||||||||| |||| || |||||||||||||    
T  4584306 ttttttgtttgaaaaaggtccccggccccact--tcatcattgagttggcatggttttgcccacgtggcagttgctgattgtgcaacttttgccacgtgg 4584209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 696 - 818
Target Start/End: Original strand, 39840581 - 39840703
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| |||||||      |||| ||  |||| | || |||||||||||||||||||    
T  39840581 tttgaaatacatccctgtaaatttttttttgtttgaaaaaggtccctgaccccacttcatgtctgacttgacatgttattcgccacgtggcagttgctga 39840680  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || |||| |||| ||||    
T  39840681 ctgtgcaacttttaccacatggc 39840703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 766 - 819
Target Start/End: Complemental strand, 4062480 - 4062427
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  4062480 gcatggttttggccacgtgacagttgctgactgtgcaacttttgccacgtggcg 4062427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 727 - 818
Target Start/End: Original strand, 51993516 - 51993607
Alignment:
Q  727 tttgaaaaaggtctctggccccactattc-agctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||||||| || | | ||||||| |||| ||||| ||||||||||| ||||||||| || || ||||||||||||||    
T  51993516 tttgaaaaaggtctctggccccac-atccgatctgatttggcattgtttttgccacgtggcatttgctgactatgcaacttttgccacgtggc 51993607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 759 - 818
Target Start/End: Original strand, 4029671 - 4029730
Alignment:
Q  759 tgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| |||||| |||||||||||||||||||||||||||| || ||||||| ||||||    
T  4029671 tgatttggcatgggtttggccacgtggcagttgctgactgtgcaacttttgccgcgtggc 4029730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 711 - 786
Target Start/End: Complemental strand, 30984126 - 30984051
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggc 786  Q
    |||||||| |||||||||| ||||||||| ||| |||||||||| || |||  | |||||||||||||||||||||    
T  30984126 tgtaaatttttttttgttttaaaaaggtccctgaccccactattgagttgaagtggcatggttttggccacgtggc 30984051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 723 - 818
Target Start/End: Original strand, 39958095 - 39958190
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||| ||||||||||  ||    |||| | |||||||||| |||| ||||||||||||||||||| || || |||||||||||    
T  39958095 tttgtttgaaaaaggtccctggccccacattttttatgatgtggcatggtttttgccatgtggcagttgctgactgtgcaacttatgccacgtggc 39958190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 5567251 - 5567349
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||||||||||| ||  | |||  | | |||  ||||||||||||||||||||||||||||  | ||||||||||||||    
T  5567251 ttttttgttttaaaaaggtccctggccccacttttttgttgacatgggatgactttggccacgtggcagttgctgactgtgcgacttttgccacgtggc 5567349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 44598626 - 44598528
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||| ||||||| ||  |||||  | | |||| ||||||||||||| ||||||||| |||| || ||||||||||||||    
T  44598626 ttttttgttttaaaaaggtccctgaccccacttttttgctgacatgggatggctttggccacgtggtagttgctgattgtgcaacttttgccacgtggc 44598528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 45915597 - 45915695
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| || |||||| | ||  |||||  | | |||| |||||||||||||||||||||||||||| || |||||||| |||||    
T  45915597 ttttttgttttaaaaaggtccctagccccatttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcaacttttgccatgtggc 45915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 759 - 820
Target Start/End: Original strand, 39972154 - 39972215
Alignment:
Q  759 tgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||| |||||||||||||||| || |||||||||| |||| || ||||||||||||||||    
T  39972154 tgatttggcatggttttggccacatgacagttgctgaatgtgcaacttttgccacgtggcgc 39972215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 695 - 764
Target Start/End: Complemental strand, 51466454 - 51466386
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattt 764  Q
    |||||||||||||| |||||||  || ||||||| |||||||||  ||||||||||||||||||||||||    
T  51466454 ctttgaaatacatccctgtaaaa-atattttgttggaaaaaggttcctggccccactattcagctgattt 51466386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 695 - 750
Target Start/End: Complemental strand, 50126439 - 50126384
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccac 750  Q
    ||||||| |||||| |||||||  ||||||||||||||||||||| ||||||||||    
T  50126439 ctttgaattacatccctgtaaaaaattttttgtttgaaaaaggtcactggccccac 50126384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 766 - 820
Target Start/End: Complemental strand, 21080963 - 21080909
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||| |||||||||||||||||||||||  || || |||||||||||||    
T  21080963 gcatggtttttgccacgtggcagttgctgactgtacaacttatgccacgtggcgc 21080909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 22506232 - 22506330
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| |||||| |||| ||  |||||  | | |||| |||||||||||||||||||||| ||||| || |||| ||| |||||    
T  22506232 ttttttgttttaaaaaggtccctggcctcacttttttgctgacatgggatggatttggccacgtggcagttgctgtctgtgcaactttttccaagtggc 22506330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 759 - 820
Target Start/End: Original strand, 44503290 - 44503352
Alignment:
Q  759 tgattttgcatggttttgg-ccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||| ||| |||||||| ||||||||||||||||||||||| || || |||||||||||||    
T  44503290 tgatttggcaaggttttgggccacgtggcagttgctgactgtgcaacttatgccacgtggcgc 44503352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 777 - 818
Target Start/End: Original strand, 29373280 - 29373321
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  29373280 gccacgtggcagttgatgactgtgtaacttttgccacgtggc 29373321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 720 - 752
Target Start/End: Original strand, 19438671 - 19438703
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccacta 752  Q
    |||||||||||||||||||||||||||||||||    
T  19438671 ttttttgtttgaaaaaggtctctggccccacta 19438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 724 - 787
Target Start/End: Complemental strand, 5567868 - 5567805
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggca 787  Q
    |||||| ||||||||| ||| |||||| |||||| |||  | ||||||||||||||||||||||    
T  5567868 ttgtttcaaaaaggtccctgaccccacaattcagttgaagtggcatggttttggccacgtggca 5567805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 776 - 818
Target Start/End: Complemental strand, 48233080 - 48233038
Alignment:
Q  776 ggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||||||||||| || || |||||||||||    
T  48233080 ggccacgtggcagttgctgactgtgcaacttctgccacgtggc 48233038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 776 - 818
Target Start/End: Complemental strand, 48238120 - 48238078
Alignment:
Q  776 ggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||||||||||| || || |||||||||||    
T  48238120 ggccacgtggcagttgctgactgtgcaacttctgccacgtggc 48238078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 782 - 815
Target Start/End: Original strand, 272924 - 272957
Alignment:
Q  782 gtggcagttgctgactgtgtaagttttgccacgt 815  Q
    ||||||||||||||||||| ||||||||||||||    
T  272924 gtggcagttgctgactgtgcaagttttgccacgt 272957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 720 - 789
Target Start/End: Original strand, 21080469 - 21080538
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagt 789  Q
    |||||||||||||||||||| ||||||||||  ||  | |||| | |||||| ||| |||||||||||||    
T  21080469 ttttttgtttgaaaaaggtccctggccccacatttttgatgatatggcatgggttttgccacgtggcagt 21080538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 6e-40; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 695 - 819
Target Start/End: Complemental strand, 43656208 - 43656084
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  43656208 ctttgaaatacatccctgtaattttttttttgtttgaaaaaggtctctggccccactattcagctgatttgacatggttttggccacatggcagttgctg 43656109  T
Q  795 actgtgtaagttttgccacgtggcg 819  Q
      |||| || |||||||||||||||    
T  43656108 catgtgcaacttttgccacgtggcg 43656084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 723 - 820
Target Start/End: Complemental strand, 41354742 - 41354645
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  41354742 tttgtttgaaaaaggtctctggccccactattcagctgatttgacatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcgc 41354645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 720 - 825
Target Start/End: Original strand, 42488531 - 42488636
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||||||||||||  | |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  42488531 ttttttgtttgaaaaaggtccttagccccactattcagctgatttgacatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcg 42488630  T
Q  820 cgccac 825  Q
     |||||    
T  42488631 tgccac 42488636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 711 - 820
Target Start/End: Complemental strand, 12216821 - 12216712
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgc 810  Q
    |||||||| |||||||||| |||||||||  |||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| || ||||||    
T  12216821 tgtaaatttttttttgttttaaaaaggtccttggccccactattcaggtgaagtggcatggttttggccacgtggcagttgctgactgtgcaacttttgc 12216722  T
Q  811 cacgtggcgc 820  Q
    ||||||||||    
T  12216721 cacgtggcgc 12216712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 724 - 825
Target Start/End: Original strand, 42121064 - 42121165
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    ||||||||||||||||||||| || ||||||||||| |||| | |||||||||||||||||||||||| |||||||| || ||||||||||||||| |||    
T  42121064 ttgtttgaaaaaggtctctggtcctactattcagctaatttggtatggttttggccacgtggcagttggtgactgtgcaacttttgccacgtggcgtgcc 42121163  T
Q  824 ac 825  Q
    ||    
T  42121164 ac 42121165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 722 - 820
Target Start/End: Complemental strand, 35325730 - 35325632
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||| ||||||||| |||| |||||||||||| |||  | ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  35325730 ttttgttttaaaaaggtccctggtcccactattcaggtgaagtggcatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcgc 35325632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 720 - 817
Target Start/End: Original strand, 54294285 - 54294382
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||| |||| || |||||||||||||    
T  54294285 ttttttgtttaaaaaatgtctctggccccactattcagctaatttggtatggttttggccacatggcagttgctgattgtgcaacttttgccacgtgg 54294382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 704 - 820
Target Start/End: Original strand, 44527216 - 44527332
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaa 803  Q
    ||||| |||||| || |||||||||| ||||||||  ||| ||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| ||    
T  44527216 acatccctgtaattttttttttgttttaaaaaggttcctgaccccactattcagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaa 44527315  T
Q  804 gttttgccacgtggcgc 820  Q
     ||||| ||||||||||    
T  44527316 cttttgtcacgtggcgc 44527332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 9175707 - 9175609
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||| ||||||||||||| |||  |  |||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  9175707 ttttttgttttaaaaaggtccctgaccccactattcagttgaagtgacatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 9175609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 711 - 817
Target Start/End: Original strand, 39452052 - 39452158
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgc 810  Q
    |||||| |||||||||||| ||||||||| ||| ||||||||||||| |||  |  ||||||||||||||||||||||||||| |||||| || |||||     
T  39452052 tgtaaaatattttttgttttaaaaaggtccctgaccccactattcagttgaagtgacatggttttggccacgtggcagttgctaactgtgcaacttttgt 39452151  T
Q  811 cacgtgg 817  Q
    |||||||    
T  39452152 cacgtgg 39452158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 721 - 818
Target Start/End: Original strand, 1984939 - 1985036
Alignment:
Q  721 tttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||| |||| ||||||||| || |||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| || ||||| ||||||||    
T  1984939 ttttcgttttaaaaaggtccctagccccactattcagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaatttttgtcacgtggc 1985036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 711 - 820
Target Start/End: Original strand, 39617729 - 39617838
Alignment:
Q  711 tgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgc 810  Q
    ||||| || |||||||||| ||||||||| |||| |||||||||||| |||  |  |||| ||||||||||||||||||||||||||||| || ||||||    
T  39617729 tgtaattttttttttgtttcaaaaaggtccctggtcccactattcagttgaagtgacatgattttggccacgtggcagttgctgactgtgcaacttttgc 39617828  T
Q  811 cacgtggcgc 820  Q
    ||| ||||||    
T  39617829 cacatggcgc 39617838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 696 - 820
Target Start/End: Complemental strand, 15951506 - 15951382
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||||||| | ||||||||||||||| |||| ||||||||||  ||  | |||| | |||||| ||| |||||||||||||||||||    
T  15951506 tttgaaaaacatccctgtaaaattttttttgtttgaaaacggtccctggccccacatttttgatgatatggcatgggttttgccacgtggcagttgctga 15951407  T
Q  796 ctgtgtaagttttgccacgtggcgc 820  Q
    ||||| || || |||||||||||||    
T  15951406 ctgtgcaacttctgccacgtggcgc 15951382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 714 - 818
Target Start/End: Complemental strand, 39452745 - 39452641
Alignment:
Q  714 aaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccac 813  Q
    ||||| |||||||||| ||||||||| ||||||||||| ||  |||||  | | |||| |||||||||||||||||||||||||||| || |||||||||    
T  39452745 aaatttttttttgttttaaaaaggtccctggccccacttttttgctgacataggatggctttggccacgtggcagttgctgactgtgcaacttttgccac 39452646  T
Q  814 gtggc 818  Q
    |||||    
T  39452645 gtggc 39452641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 695 - 818
Target Start/End: Original strand, 17527101 - 17527224
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||| ||||||| | |||||||||||||||||||| ||||||||||  ||    |||| | |||||||||| ||||| ||||||||||||    
T  17527101 ctttgaattacatccctgtaaaattttttttgtttgaaaaaggtccctggccccacattttttatgatgtggcatggtttttgccacctggcagttgctg 17527200  T
Q  795 actgtgtaagttttgccacgtggc 818  Q
    |||||| || || |||||||||||    
T  17527201 actgtgcaacttatgccacgtggc 17527224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 723 - 818
Target Start/End: Original strand, 21102697 - 21102792
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||| ||| ||||||| ||  |||||| | | |||||||||||||||||||||||||||||| || || ||||||||||||||    
T  21102697 tttgtttgaaaaaggtccctgaccccacttttttgctgatatggtatggttttggccacgtggcagttgctgactctgcaacttttgccacgtggc 21102792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 731 - 818
Target Start/End: Complemental strand, 37737611 - 37737524
Alignment:
Q  731 aaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||| |||| |||||||||||  |||  | ||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  37737611 aaaaaggtccctggtcccactattcaattgaagtggcatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 37737524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 697 - 820
Target Start/End: Complemental strand, 44878980 - 44878857
Alignment:
Q  697 ttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgac 796  Q
    ||||| |||||| |||||| || ||||||||||||||||||||  |||||||||  ||  | |||| | |||||||||| ||||||||||||||||||||    
T  44878980 ttgaattacatccctgtaattttttttttgtttgaaaaaggtccatggccccacatttttgatgatgtggcatggtttttgccacgtggcagttgctgac 44878881  T
Q  797 tgtgtaagttttgccacgtggcgc 820  Q
    |||| || || |||||| ||||||    
T  44878880 tgtgcaacttatgccacatggcgc 44878857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 704 - 819
Target Start/End: Original strand, 52935760 - 52935874
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaa 803  Q
    ||||| || |||||| |||| ||||| |||||||||  |||||||||||||||| |||    ||||||||||||||||||| ||||||||||||||||||    
T  52935760 acatccctctaaatttttttctgttttaaaaaggtccatggccccactattcagttgaagcggcatggttttggccacgtgacagttgctgactgtgtaa 52935859  T
Q  804 gttttgccacgtggcg 819  Q
     |||||| ||||||||    
T  52935860 -ttttgcaacgtggcg 52935874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 12216185 - 12216283
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||||||||||| ||  |||||  | | |||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  12216185 ttttttgttttaaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 12216283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 696 - 786
Target Start/End: Complemental strand, 53427962 - 53427872
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggc 786  Q
    ||||||||||||| ||||||  | |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||| | ||||||||    
T  53427962 tttgaaatacatccctgtaatattttttttgtttgaaaaaggtccctgaccccactattcagctgatttgacatggttttagtcacgtggc 53427872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 724 - 794
Target Start/End: Original strand, 54280949 - 54281019
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||||||||||||| | |||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  54280949 ttgtttgaaaaaggtctattgccccactattcagctcatttggcatggttttggtcacgtggcagttgctg 54281019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 696 - 820
Target Start/End: Original strand, 44706978 - 44707102
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||| ||||| |||||||||||||||||||| ||||||||||  ||    |||| | |||||| ||| |||||||||||||||||||    
T  44706978 tttgaaaaacatccctgcaaatttttttttgtttgaaaaaggtccctggccccacattttttatgatatggcatggattttgccacgtggcagttgctga 44707077  T
Q  796 ctgtgtaagttttgccacgtggcgc 820  Q
    ||||| || || ||||| |||||||    
T  44707078 ctgtgcaatttctgccaagtggcgc 44707102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 696 - 815
Target Start/End: Complemental strand, 17527676 - 17527558
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||||||| | |||||||||||||||||||| ||||||||||  ||    |||| | |||||| ||| |||||||||||||||||||    
T  17527676 tttgaaaaacatc-ctgtaaaattttttttgtttgaaaaaggtccctggccccacattttttatgatctggcatgggttttgccacgtggcagttgctga 17527578  T
Q  796 ctgtgtaagttttgccacgt 815  Q
    ||||| || |||||||||||    
T  17527577 ctgtgcaacttttgccacgt 17527558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 723 - 820
Target Start/End: Original strand, 31090767 - 31090864
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||||| ||||||||||||    | |||  | |||||||||| |||||||||||||||||||||||| || || |||||||||||||    
T  31090767 tttgtttgaaaaaggtccctggccccactaaaacgttgaagtggcatggtttttgccacgtggcagttgctgactgtgcaacttatgccacgtggcgc 31090864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 723 - 811
Target Start/End: Complemental strand, 48045605 - 48045517
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgcc 811  Q
    |||||||||||| | || ||||| | |||||||||||||||| ||||||||||| |||||||||||||  |||||||| || |||||||    
T  48045605 tttgtttgaaaatgatccctggctcaactattcagctgatttggcatggttttgaccacgtggcagttattgactgtgcaacttttgcc 48045517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 695 - 818
Target Start/End: Complemental strand, 27843827 - 27843704
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||| |||||||   ||| |||||||||||||||||||||||||||  ||    |||| |  ||||| ||| ||||||||||||||||||    
T  27843827 ctttgaattacatccctgtaaaaattttcttgtttgaaaaaggtctctggccccacattttttatgatatgacatggattttgccacgtggcagttgctg 27843728  T
Q  795 actgtgtaagttttgccacgtggc 818  Q
    |||||| || || |||||||||||    
T  27843727 actgtgcaacttctgccacgtggc 27843704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 696 - 815
Target Start/End: Complemental strand, 41780386 - 41780267
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||| |||  | ||||||||||||||||||| ||||||||||||    | |||  | |||||||||| |||||||||||||||||||    
T  41780386 tttgaaaaacatccctgcaaaaaaatttttgtttgaaaaaggtccctggccccactaaaacgttgaagtggcatggtttttgccacgtggcagttgctga 41780287  T
Q  796 ctgtgtaagttttgccacgt 815  Q
    ||||| || || ||||||||    
T  41780286 ctgtgcaacttatgccacgt 41780267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 731 - 817
Target Start/End: Original strand, 35325097 - 35325183
Alignment:
Q  731 aaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    ||||||||| ||||||||||| ||  |||||  | | |||| |||||||||||||||||||||||||||| || |||||||||||||    
T  35325097 aaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcaacttttgccacgtgg 35325183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 696 - 816
Target Start/End: Complemental strand, 25913350 - 25913234
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggt-tttggccacgtggcagttgctg 794  Q
    ||||||| |||||  |||||| |||||||||||||||||||||||||| ||||||| ||  |||||     |||||| |||| |||  ||||||||||||    
T  25913350 tttgaaaaacatccttgtaaaatattttttgtttgaaaaaggtctctgaccccacttttttgctga-----catggtatttgaccaaatggcagttgctg 25913256  T
Q  795 actgtgtaagttttgccacgtg 816  Q
    |||||| || ||||||||||||    
T  25913255 actgtgcaacttttgccacgtg 25913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 772 - 820
Target Start/End: Original strand, 25166043 - 25166091
Alignment:
Q  772 ttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  25166043 ttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcgc 25166091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 724 - 820
Target Start/End: Original strand, 27843211 - 27843307
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||||||||||||||||||||||      |||  | |||||||||| ||||||| |||||||||||||||| || || |||||||||||||    
T  27843211 ttgtttgaaaaaggtctctggccccactaaaacattgaagtcgcatggtttttgccacgttgcagttgctgactgtgcaacttatgccacgtggcgc 27843307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 723 - 818
Target Start/End: Original strand, 41779823 - 41779918
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||  |||||||||  ||  | |||| | |||||| ||| |||||||||||||||||||||||| || || |||||||||||    
T  41779823 tttgtttgaaaaaggtccatggccccacatttttgatgatatggcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtggc 41779918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 724 - 818
Target Start/End: Original strand, 37736888 - 37736982
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| |||||||||| || ||||||| ||  |||||  | | || | |||||||||||||||||||||||||||| || ||||||||||||||    
T  37736888 ttgttttaaaaaggtctttgaccccacttttttgctgacatgggatcgctttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 37736982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 696 - 818
Target Start/End: Original strand, 39185343 - 39185464
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||||||||  |||||||||||||||||  || || ||||||||    | |||  | |||||||||| |||||||||||||||||||    
T  39185343 tttgaaaaacatctctgtaaatctttttttgtttgaaaaagtcct-tgaccccactaaaacgttgaagtggcatggtttttgccacgtggcagttgctga 39185441  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  39185442 ctgtgcaacttatgccacgtggc 39185464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 725 - 818
Target Start/End: Complemental strand, 36099 - 36006
Alignment:
Q  725 tgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||| ||||||||| ||||||||||| ||  | |||  | | |||| ||||||||||||||||||||||||||||  | ||||||||||||||    
T  36099 tgttttaaaaaggtccctggccccacttttttgttgacatgggatggctttggccacgtggcagttgctgactgtgcgacttttgccacgtggc 36006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 695 - 812
Target Start/End: Complemental strand, 21103318 - 21103201
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||| ||||| |||||||   ||||||||||||||||| |  |||||||||||  |   || |||| |||| ||||| |||||||| |||||||||    
T  21103318 ctttgaaaaacatccctgtaaaaatttttttgtttgaaaaagattcctggccccacttctgctctaatttggcattgtttttgccacgtgccagttgctg 21103219  T
Q  795 actgtgtaagttttgcca 812  Q
    |||||| || ||||||||    
T  21103218 actgtgcaacttttgcca 21103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 723 - 820
Target Start/End: Original strand, 23485594 - 23485691
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||||||||||| |||||||||  ||  | |||| | |||||| ||| ||||| |||||||||||||||||| || || |||||| ||||||    
T  23485594 tttgtttgaaaaaggtctatggccccacatttttgatgatatggcatgggttttgccacatggcagttgctgactgtgcaacttatgccacatggcgc 23485691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 796
Target Start/End: Complemental strand, 8482525 - 8482453
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgac 796  Q
    |||||||||||||||| ||||||||||  ||  | |||| | |||||||||| ||||||||||||||||||||    
T  8482525 ttgtttgaaaaaggtccctggccccacatttttgatgatatggcatggtttttgccacgtggcagttgctgac 8482453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 720 - 820
Target Start/End: Original strand, 15445084 - 15445183
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||||||||||| |||  |||||||||||||||||||| |||  ||||||  ||| ||||||||| | | ||||||| || ||| ||||||||    
T  15445084 ttttttgtttgaaaaaggtttcta-ccccactattcagctgatttggcagagttttgatcacttggcagttgattagtgtgtaacttctgcaacgtggcg 15445182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 820
Target Start/End: Original strand, 41354506 - 41354602
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||| |||||||||||| |      |||| || ||||| | || ||||| ||||||||||||||||||||| ||||||||||||||||    
T  41354506 ttgtttgaaaaagatctctggccccatttcatgtctgacttggcatgttattcgccacatggcagttgctgactgtgtaacttttgccacgtggcgc 41354602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 703 - 819
Target Start/End: Complemental strand, 25166731 - 25166609
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagt------tgctgac 796  Q
    |||||| |||||||  | ||||||||| ||||||||| |||||||||||     | |||||| ||| ||||||||||||||||||||      |||||||    
T  25166731 tacatccctgtaaaaaaatttttgttttaaaaaggtccctggccccacttccttggtgatttggcaaggttttggccacgtggcagtggcagttgctgac 25166632  T
Q  797 tgtgtaagttttgccacgtggcg 819  Q
    |||| || |||||||||||||||    
T  25166631 tgtgcaacttttgccacgtggcg 25166609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 698 - 789
Target Start/End: Complemental strand, 31091322 - 31091231
Alignment:
Q  698 tgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagt 789  Q
    ||||| ||||| ||||||||| |||||||||||||||||||| ||| ||||||  ||  | |||| | |||||| ||| |||||||||||||    
T  31091322 tgaaaaacatccctgtaaatttttttttgtttgaaaaaggtccctgaccccacatttttgatgatatggcatgggttttgccacgtggcagt 31091231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 696 - 818
Target Start/End: Original strand, 8481991 - 8482112
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||||||| | ||||||||||||||||| || |||||||||   ||    |||  | |||||| ||| |||||||||||||||||||    
T  8481991 tttgaaaaacatccctgtaaaat-ttttttgtttgaaaaagatccctggccccatattttttatgacatggcatgggttttgccacgtggcagttgctga 8482089  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  8482090 ctgtgcaacttctgccacgtggc 8482112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 695 - 752
Target Start/End: Complemental strand, 23143513 - 23143456
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccacta 752  Q
    ||||||| |||||| || |||||| |||||||||||||||||||| |||| |||||||    
T  23143513 ctttgaattacatccctataaatttttttttgtttgaaaaaggtccctggtcccacta 23143456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 723 - 820
Target Start/End: Original strand, 43655432 - 43655529
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||||| |||||||||||      || | || ||||| | || |||| ||||||||||||||||||| || ||||||||||||||||    
T  43655432 tttgtttgaaaaaggtccctggccccacttcatgtctaacttggcatgttattcgccatgtggcagttgctgactgtgcaacttttgccacgtggcgc 43655529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 724 - 820
Target Start/End: Complemental strand, 11058407 - 11058311
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||||||||| |||||||||||    | |||| || |||| ||||| |||||||||||||||   |||||| || ||||| ||||||||||    
T  11058407 ttgtttgaaaaaggtccctggccccacttccgatctgaattggcattgtttttgccacgtggcagttgtcaactgtgcaacttttgtcacgtggcgc 11058311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 696 - 750
Target Start/End: Complemental strand, 23486132 - 23486077
Alignment:
Q  696 tttgaaatacatcgctgtaaattatttttt-gtttgaaaaaggtctctggccccac 750  Q
    ||||||| ||||| ||||||||| |||||| |||||||||||||| ||||||||||    
T  23486132 tttgaaaaacatccctgtaaattttttttttgtttgaaaaaggtccctggccccac 23486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 3990819 - 3990721
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||| ||| |||||||||||     | |||| | |||||| | | |||||||||||||||||||||||| || || |||||||||||    
T  3990819 ttttttgttttaaaaatgtccctggccccacttcgttggtgatgtggcatgggtcttgccacgtggcagttgctgactgtgcaacttctgccacgtggc 3990721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 816
Target Start/End: Original strand, 26051611 - 26051661
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtg 816  Q
    |||||| ||| |||||||||||||||||||||||| || || |||||||||    
T  26051611 gcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtg 26051661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 780 - 818
Target Start/End: Original strand, 48045055 - 48045093
Alignment:
Q  780 acgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  48045055 acgtggcagttgctgactgtgcaacttttgccacgtggc 48045093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 724 - 818
Target Start/End: Complemental strand, 54281655 - 54281561
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||| ||| |||||||      |||| || ||||| | || |||||||||||||||||||||||| || |||||||| |||||    
T  54281655 ttgtttgaaaaaggtccctgaccccacttcatgtctgacttggcatgttattagccacgtggcagttgctgactgtgcaacttttgccatgtggc 54281561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 5e-37; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 695 - 818
Target Start/End: Complemental strand, 28784810 - 28784687
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||||||||| ||||||| | ||||||||||||||| ||||  ||||||||||||||||||||  | |||||| ||||||||||||||||||||||    
T  28784810 ctttgaaatacatccctgtaaaattttttttgtttgaaaatggtccttggccccactattcagctgaagtggcatggctttggccacgtggcagttgctg 28784711  T
Q  795 actgtgtaagttttgccacgtggc 818  Q
    ||||||||| ||||||||||||||    
T  28784710 actgtgtaacttttgccacgtggc 28784687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 724 - 815
Target Start/End: Complemental strand, 2076371 - 2076280
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgt 815  Q
    |||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||    
T  2076371 ttgtttgaaaaatgtccctggccccaccattcagctgatttggcatggttttggccacgtggcagttgctgactgtgcaacttttgccacgt 2076280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 696 - 825
Target Start/End: Complemental strand, 2215033 - 2214900
Alignment:
Q  696 tttgaaatacatcgctgtaaattattt----tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttg 791  Q
    ||||||||||||| || ||||||||||    ||| ||| |||||||||||  | ||||||||| || |||||| |||||||||||||||||||| |||||    
T  2215033 tttgaaatacatccctataaattatttattattttttttaaaaaggtctcaagtcccactattaagttgatttggcatggttttggccacgtggtagttg 2214934  T
Q  792 ctgactgtgtaagttttgccacgtggcgcgccac 825  Q
    ||||||||| || ||||||||||||||| |||||    
T  2214933 ctgactgtgcaacttttgccacgtggcgtgccac 2214900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 703 - 819
Target Start/End: Complemental strand, 2238806 - 2238690
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| ||||||||| |||||||||| ||||||||| |||||||||||     | |||||| ||| ||||||||||||||||||||||||||||||| |    
T  2238806 tacatccctgtaaatttttttttgttttaaaaaggtccctggccccacttccttggtgatttggcaaggttttggccacgtggcagttgctgactgtgca 2238707  T
Q  803 agttttgccacgtggcg 819  Q
    | |||||||||||||||    
T  2238706 acttttgccacgtggcg 2238690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 703 - 819
Target Start/End: Complemental strand, 28917089 - 28916973
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| ||||||||| |||||||||| ||||||||| |||||||||||     | |||||| ||| ||||||||||||||||||||||||||||||| |    
T  28917089 tacatccctgtaaatttttttttgttttaaaaaggtccctggccccacttccttggtgatttggcaaggttttggccacgtggcagttgctgactgtgca 28916990  T
Q  803 agttttgccacgtggcg 819  Q
    | |||||||||||||||    
T  28916989 acttttgccacgtggcg 28916973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 1907454 - 1907356
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| || ||||||| |||||| |||  | ||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  1907454 ttttttgttttaaaaaggtccctagccccacaattcagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 1907356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 724 - 819
Target Start/End: Complemental strand, 27352702 - 27352607
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||| |||| |||||||||||||||||||||  | |||||  ||||||||| |||||||||||||||||| || |||||||||||||||    
T  27352702 ttgtttgaaaatggtccctggccccactattcagctgaagtggcatgactttggccacttggcagttgctgactgtgcaacttttgccacgtggcg 27352607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 15272313 - 15272215
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||||||||||||||||| |||  | | ||||||||| |||||||||||||| |||||||| || ||||||||||||||    
T  15272313 ttttttgttttaaaaaggtcactggccccactattcagttgaagtggtatggttttgaccacgtggcagttgttgactgtgcaacttttgccacgtggc 15272215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 695 - 812
Target Start/End: Original strand, 39475470 - 39475587
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||||||||||  || ||||| |||||||||| |||| |||| |||||||||||||||||||||  |  ||||  |||||||| |||||||||||||    
T  39475470 ctttgaaatacatctttgcaaatttttttttgtttaaaaatggtccctggccccactattcagctgaagtgacatgactttggccatgtggcagttgctg 39475569  T
Q  795 actgtgtaagttttgcca 812  Q
    |||||| || ||||||||    
T  39475570 actgtgcaacttttgcca 39475587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 697 - 825
Target Start/End: Original strand, 25455856 - 25455982
Alignment:
Q  697 ttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgac 796  Q
    ||||||||| || ||||||| ||||||||||||||||||| || ||| || |||||||||||||||||  ||||||||||||||||| ||||||| ||||    
T  25455856 ttgaaatacgtc-ctgtaaaatattttttgtttgaaaaag-tccctgacctcactattcagctgatttgacatggttttggccacgtagcagttgttgac 25455953  T
Q  797 tgtgtaagttttgccacgtggcgcgccac 825  Q
    |||| || | |  |||||||||| |||||    
T  25455954 tgtgcaactctaaccacgtggcgtgccac 25455982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 696 - 818
Target Start/End: Original strand, 8873754 - 8873875
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| |||||  ||||||||||||||||||| ||||||||||||||||||||  ||  | |||| | |||||| ||| ||||| |||||||||||||    
T  8873754 tttgaaaaacatccatgtaaattattttttgttt-aaaaaggtctctggccccacatttttgatgatatggcatgggttttgccacatggcagttgctga 8873852  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  8873853 ctgtgcaatttctgccacgtggc 8873875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 696 - 820
Target Start/End: Complemental strand, 22277211 - 22277087
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| |||||| ||  ||||||||||||||||||| ||||||||||||    | |||  | |||||||||| |||||||||||||||||||    
T  22277211 tttgaaaaacatccctgtaattttatttttgtttgaaaaaggtccctggccccactaaaacgttgaagtggcatggtttttgccacgtggcagttgctga 22277112  T
Q  796 ctgtgtaagttttgccacgtggcgc 820  Q
    ||||| || || |||||| ||||||    
T  22277111 ctgtgcaacttatgccacatggcgc 22277087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 724 - 817
Target Start/End: Original strand, 44075932 - 44076025
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    |||||||||||||| | |||   |||||||||| ||||||| |||||||||| ||||||||||||||| |||||||| || |||||||| ||||    
T  44075932 ttgtttgaaaaaggacactgtgtccactattcaactgatttggcatggttttagccacgtggcagttgttgactgtgcaacttttgccatgtgg 44076025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 696 - 800
Target Start/End: Complemental strand, 22387059 - 22386955
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| || |||||| |||||||||||||||||||| ||||||||||||    | |||  | |||||||||| |||||||||||||| ||||    
T  22387059 tttgaaaaacatccctctaaatttttttttgtttgaaaaaggtccctggccccactaaaacgttgaagtggcatggtttttgccacgtggcagttactga 22386960  T
Q  796 ctgtg 800  Q
    |||||    
T  22386959 ctgtg 22386955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 731 - 819
Target Start/End: Original strand, 35907462 - 35907550
Alignment:
Q  731 aaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||| |||| |||||||||||||||||||||  | |||||  ||||||||||||||||||||||||| || || |||| ||||||||||    
T  35907462 aaaatggtccctggccccactattcagctgaactggcatgactttggccacgtggcagttgctgactttgcaacttttaccacgtggcg 35907550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 703 - 820
Target Start/End: Original strand, 2238057 - 2238175
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggtttt-ggccacgtggcagttgctgactgtgt 801  Q
    |||||| ||||||| | |||||||||| ||||||||| |||||||||||   | | |||| | |||   |||| |||||||||||||||||||||||||     
T  2238057 tacatcactgtaaaattttttttgttttaaaaaggtccctggccccacttcgctggtgatgtggcaacatttttggccacgtggcagttgctgactgtgc 2238156  T
Q  802 aagttttgccacgtggcgc 820  Q
    || ||||||||||||||||    
T  2238157 aacttttgccacgtggcgc 2238175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 703 - 820
Target Start/End: Original strand, 28916360 - 28916478
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggtttt-ggccacgtggcagttgctgactgtgt 801  Q
    |||||| ||||||| | |||||||||| ||||||||| |||||||||||   | | |||| | |||   |||| |||||||||||||||||||||||||     
T  28916360 tacatccctgtaaaattttttttgttttaaaaaggtccctggccccacttcgctggtgatgtggcaacatttttggccacgtggcagttgctgactgtgc 28916459  T
Q  802 aagttttgccacgtggcgc 820  Q
    || ||||||||||||||||    
T  28916460 aacttttgccacgtggcgc 28916478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 35421111 - 35421209
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||  ||||||||||| ||  |||||  | | |||| ||||||||||||||||||||||||||||  | ||||||||||||||    
T  35421111 ttttttgttttaaaaaggttcctggccccacttttttgctgacatgggatggatttggccacgtggcagttgctgactgtgcgacttttgccacgtggc 35421209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 695 - 816
Target Start/End: Complemental strand, 11735779 - 11735658
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||||  |||| |||||||  | |||||||||||||||||||  || ||||||| ||  ||| |  |   |||||||||||||| ||||||||||||    
T  11735779 ctttgaaaatcatccctgtaaaaaagtttttgtttgaaaaaggtccatgaccccacttttttgctaacatgatatggttttggccacatggcagttgctg 11735680  T
Q  795 actgtgtaagttttgccacgtg 816  Q
    |||||| |||||||||||||||    
T  11735679 actgtgcaagttttgccacgtg 11735658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 724 - 813
Target Start/End: Complemental strand, 26240979 - 26240890
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccac 813  Q
    |||||||||||||||| ||||||||||  ||  | |||| | |||||||||| |||||||||||||||||||||||| || || ||||||    
T  26240979 ttgtttgaaaaaggtccctggccccacatttttgatgatgtggcatggtttttgccacgtggcagttgctgactgtgcaacttatgccac 26240890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 749 - 825
Target Start/End: Complemental strand, 914820 - 914744
Alignment:
Q  749 actattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgccac 825  Q
    |||||||||||||||| |||||||||||| |||||| |||| ||||||| |  || ||||||||||||||| |||||    
T  914820 actattcagctgatttggcatggttttggtcacgtgacagtagctgactctacaacttttgccacgtggcgtgccac 914744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 818
Target Start/End: Complemental strand, 35908391 - 35908296
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccact-attcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||||||||||||||| | |||  ||| ||  |||||||||| ||| ||||||||||||||||||| || ||||| ||||||||    
T  35908391 tttgtttgaaaaaggtctctggccccacttaatcat-tgagttgccatggttttgcccatgtggcagttgctgactgtgcaacttttgtcacgtggc 35908296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 703 - 820
Target Start/End: Original strand, 29090965 - 29091083
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttg-gccacgtggcagttgctgactgtgt 801  Q
    |||||| ||||||| | |||||||||| ||||||||| |||||||||||   | | |||| | |||   ||||  ||||||||||||||||||||||||     
T  29090965 tacatccctgtaaaattttttttgttttaaaaaggtccctggccccacttcgctggtgatgtggcaacattttttgccacgtggcagttgctgactgtgc 29091064  T
Q  802 aagttttgccacgtggcgc 820  Q
    || ||||||||||||||||    
T  29091065 aacttttgccacgtggcgc 29091083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 720 - 817
Target Start/End: Original strand, 1906724 - 1906821
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    |||||||||| |||||||||  |||||||||| ||  |||||  | | |||  |||||||||||||||||||||||||||| || |||||| ||||||    
T  1906724 ttttttgttttaaaaaggtccttggccccacttttttgctgacatgggatgactttggccacgtggcagttgctgactgtgcaacttttgcaacgtgg 1906821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 723 - 764
Target Start/End: Complemental strand, 5429762 - 5429721
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattt 764  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  5429762 tttgtttgaaaaaggtctctgaccccactattcagctgattt 5429721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 696 - 820
Target Start/End: Original strand, 22386431 - 22386556
Alignment:
Q  696 tttgaaatacatcgctgtaaattatttt-ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||  |||||||| |||| |||||||||||||||| ||||||||||  ||  | |||| | |||||| ||| ||||| ||||||||||||    
T  22386431 tttgaaaaacatccttgtaaattttttttttgtttgaaaaaggtccctggccccacatttttgatgatatggcatggattttgccacatggcagttgctg 22386530  T
Q  795 actgtgtaagttttgccacgtggcgc 820  Q
    | |||| || || ||||| |||||||    
T  22386531 attgtgcaacttctgccatgtggcgc 22386556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 819
Target Start/End: Original strand, 28783899 - 28783995
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagc--tgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||||||||| ||| |||||||  ||| |  ||| || | ||||||||| ||||||||||||||||||||||| || ||||||||| |||||    
T  28783899 tttgtttgaaaaaggtccctgaccccact--tcatcattgagttggtatggttttgcccacgtggcagttgctgactgtgcaacttttgccacatggcg 28783995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 786
Target Start/End: Original strand, 15993841 - 15993903
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggc 786  Q
    |||||||||||||||   |||  |||||||||||||||||| |||||||||| ||||||||||    
T  15993841 ttgtttgaaaaaggttcatggttccactattcagctgatttggcatggttttagccacgtggc 15993903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 695 - 789
Target Start/End: Original strand, 19281793 - 19281887
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagt 789  Q
    |||||||| ||||| |||||||   |||||||||||||||||||| ||| ||||||| ||  |||||  | | ||||||||||||| ||||||||    
T  19281793 ctttgaaaaacatccctgtaaaactttttttgtttgaaaaaggtccctgaccccacttttttgctgacatggtatggttttggccatgtggcagt 19281887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 818
Target Start/End: Original strand, 41916997 - 41917091
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||||||||| ||||||||||| ||  |||||  | | |||  |||||||| |||||||||||||||||||  | ||||||||||||||    
T  41916997 ttgttttaaaaaggtccctggccccacttttttgctgacatgggatgactttggccatgtggcagttgctgactgtgcgacttttgccacgtggc 41917091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 723 - 800
Target Start/End: Original strand, 80703 - 80780
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    ||||||| ||||||||| ||||||||||| ||  |||||  | | |||| |||||||| |||||||||||||||||||    
T  80703 tttgtttcaaaaaggtccctggccccacttttttgctgacatgggatggctttggccatgtggcagttgctgactgtg 80780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 777 - 818
Target Start/End: Complemental strand, 1907365 - 1907324
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  1907365 gccacgtggcagttgctgactgtgcaacttttgccacgtggc 1907324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 731 - 787
Target Start/End: Original strand, 29359388 - 29359444
Alignment:
Q  731 aaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggca 787  Q
    ||||||||| ||| ||||||||||||| |||  | ||||||||||||||||||||||    
T  29359388 aaaaaggtccctgaccccactattcagttgaagtggcatggttttggccacgtggca 29359444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 820
Target Start/End: Original strand, 9276957 - 9277019
Alignment:
Q  759 tgattttgcatggttttgg-ccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||| ||| |||||||| |||||||||||||||||| |||| || || |||||||||||||    
T  9276957 tgatttggcaaggttttgggccacgtggcagttgctgattgtgcaacttatgccacgtggcgc 9277019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 722 - 820
Target Start/End: Original strand, 24558936 - 24559034
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||| ||||| ||| |||||||||||   | | |||| | |||||| ||| |||||||| |||||||||||| || || || |||||||||||||    
T  24558936 ttttgttttaaaaatgtccctggccccacttcgctggtgatgtggcatgggttttgccacgtgacagttgctgactatgcaacttctgccacgtggcgc 24559034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 696 - 750
Target Start/End: Original strand, 26240532 - 26240586
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccac 750  Q
    ||||||| |||||  |||||| | ||| |||||||||||||||||||||||||||    
T  26240532 tttgaaaaacatccttgtaaaatttttgttgtttgaaaaaggtctctggccccac 26240586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 1e-34; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 724 - 819
Target Start/End: Complemental strand, 19432505 - 19432410
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  19432505 ttgtttgaaaaaggtccctggccccactattcagctgatttggcatggtttttgccacatggcagttgctgactgtgtaacttttgccacgtggcg 19432410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 697 - 820
Target Start/End: Complemental strand, 40372407 - 40372285
Alignment:
Q  697 ttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgac 796  Q
    |||||||||||| |||||| || ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| | ||| ||||    
T  40372407 ttgaaatacatccctgtaattt-ttttttgtttgaaaaaggtccttggccccactattcagctgatttggcatggttttggccacgtgggaattgttgac 40372309  T
Q  797 tgtgtaagttttgccacgtggcgc 820  Q
    | || || ||||||||||||||||    
T  40372308 tatgcaacttttgccacgtggcgc 40372285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 723 - 825
Target Start/End: Complemental strand, 19825513 - 19825411
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgc 822  Q
    ||||||||||||||||| ||| |||||||||||||||||| | |||||||||||| |||||||||||||||||||||| || ||||||||||||||| ||    
T  19825513 tttgtttgaaaaaggtccctgaccccactattcagctgatctggcatggttttggtcacgtggcagttgctgactgtgcaacttttgccacgtggcgtgc 19825414  T
Q  823 cac 825  Q
    |||    
T  19825413 cac 19825411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 724 - 825
Target Start/End: Complemental strand, 6895162 - 6895061
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| |||| |||| || ||||||||||||||| |||    
T  6895162 ttgtttgaaaaaggtccctggccccactattcagccgatttggcatggttttggccacgtggcagttactgattgtgcaacttttgccacgtggcgtgcc 6895063  T
Q  824 ac 825  Q
    ||    
T  6895062 ac 6895061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 704 - 818
Target Start/End: Original strand, 24051606 - 24051719
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaa 803  Q
    ||||| ||||||||| |||||||||| ||||| ||  ||||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| ||    
T  24051606 acatccctgtaaatt-ttttttgtttcaaaaatgttcctggccccactattcagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaa 24051704  T
Q  804 gttttgccacgtggc 818  Q
     ||||||||||||||    
T  24051705 cttttgccacgtggc 24051719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 695 - 818
Target Start/End: Original strand, 13911239 - 13911362
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||  ||    |||| | |||||||||| ||||||||||||||||||    
T  13911239 ctttgaattacatccctgtaaatttttttttgtttgaaaaaggtccctggccccacatttttaatgatatggcatggtttttgccacgtggcagttgctg 13911338  T
Q  795 actgtgtaagttttgccacgtggc 818  Q
    |||||| || || |||||||||||    
T  13911339 actgtgcaacttatgccacgtggc 13911362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 695 - 818
Target Start/End: Original strand, 38913821 - 38913943
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||| ||  |||||  | | |||||||||||||||||||||||||||    
T  38913821 ctttgaaaaacatccctgtaaatt-ttttttgtttgaaaaaggtccctggccccacttttttgctgacatggtatggttttggccacgtggcagttgctg 38913919  T
Q  795 actgtgtaagttttgccacgtggc 818  Q
    |||||| ||  |||||||| ||||    
T  38913920 actgtgcaacctttgccacatggc 38913943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 720 - 825
Target Start/End: Complemental strand, 9189449 - 9189344
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||||||||| |||||  || ||| ||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  9189449 ttttttgttttaaaaatatccctgaccccactattcagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcg 9189350  T
Q  820 cgccac 825  Q
     |||||    
T  9189349 tgccac 9189344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 724 - 819
Target Start/End: Original strand, 40567232 - 40567327
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||||| |||||  |||||||||| ||||||||| |||  | ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  40567232 ttgttttaaaaaaatctctggccctactattcagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcg 40567327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 695 - 781
Target Start/End: Complemental strand, 31559026 - 31558942
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccac 781  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||    
T  31559026 ctttgaaatacatccctgtaaatt-ttttttgtttgaaaaaggtctctggccccac-attcagccaatttggcatggttttggccac 31558942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 723 - 820
Target Start/End: Complemental strand, 26710844 - 26710747
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||| ||||||||||||  ||  | |||| | |||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  26710844 tttgtttgaaaaaggcctctggccccacatttttgatgatgtggcatggtttttgccacgtggcagttgctgactgtgcaacttttgccacgtggcgc 26710747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 723 - 820
Target Start/End: Complemental strand, 26980580 - 26980483
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||| ||||||||||||  ||  | |||| | |||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  26980580 tttgtttgaaaaaggcctctggccccacatttttgatgatgtggcatggtttttgccacgtggcagttgctgactgtgcaacttttgccacgtggcgc 26980483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 721 - 818
Target Start/End: Original strand, 8894067 - 8894163
Alignment:
Q  721 tttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||| ||||||||||||| ||||||||||||| |||  | |||||||||||||||  |||||||||||||||||| ||  |||||||||||||    
T  8894067 tttttgttttaaaaaggtctctgaccccactattcagttgaagtggcatggttttggccatatggcagttgctgactgtgcaa-ctttgccacgtggc 8894163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 723 - 786
Target Start/End: Complemental strand, 8430716 - 8430653
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggc 786  Q
    ||||||||||||| |||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  8430716 tttgtttgaaaaaagtccatggccccactattcagctgatttggcatggttttggccacgtggc 8430653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 724 - 796
Target Start/End: Original strand, 29096918 - 29096990
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgac 796  Q
    |||||||||||||||||||| |||||||||| ||||||||| | |||||||||| |||||| |||| ||||||    
T  29096918 ttgtttgaaaaaggtctctgaccccactatttagctgatttggtatggttttggtcacgtgacagtcgctgac 29096990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 1665578 - 1665480
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||| |||||||| |||| |||  | ||||| |||| ||||||||||||| ||||||| || || ||||||||||||||    
T  1665578 ttttttgttttaaaaaggtccctgaccccactactcagttgaagtggcatgatttttgccacgtggcagtagctgactatgcaacttttgccacgtggc 1665480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 724 - 818
Target Start/End: Complemental strand, 4808613 - 4808519
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||||||||| || |||||||||||||| |||  | |||| ||||||| ||||||||||||| ||||| || || ||||||||||||||    
T  4808613 ttgttttaaaaaggtccctcgccccactattcagttgaagtggcatagttttggtcacgtggcagttgttgactatgcaacttttgccacgtggc 4808519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 696 - 817
Target Start/End: Complemental strand, 29627122 - 29627001
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| |||||||   |||||||||||||||| ||| ||||||||||  ||  | |||| | |||||| ||| |||| ||||||||||||||    
T  29627122 tttgaaaaacatccctgtaaaaacttttttgtttgaaaaatgtccctggccccacatttttgatgatatggcatgggttttgccatgtggcagttgctga 29627023  T
Q  796 ctgtgtaagttttgccacgtgg 817  Q
    ||||| || || ||||||||||    
T  29627022 ctgtgcaacttctgccacgtgg 29627001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 751 - 825
Target Start/End: Original strand, 39083588 - 39083662
Alignment:
Q  751 tattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgccac 825  Q
    ||||||||||||||  ||||||||||||||||||  || ||||||||||| || ||||| ||||||||| |||||    
T  39083588 tattcagctgatttgacatggttttggccacgtgagagctgctgactgtgcaacttttgtcacgtggcgtgccac 39083662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 717 - 818
Target Start/End: Complemental strand, 13911631 - 13911530
Alignment:
Q  717 ttattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtg 816  Q
    ||||||||| ||||||||||||| || |||||||  ||    |||| | |||||| ||| |||||||||||||||||||||||| || || |||||||||    
T  13911631 ttattttttttttgaaaaaggtccctagccccacattttttatgatatggcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtg 13911532  T
Q  817 gc 818  Q
    ||    
T  13911531 gc 13911530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 703 - 820
Target Start/End: Original strand, 31023661 - 31023778
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| ||||||| | |||||||||| ||||| ||| |||||||||||   | | |||| | |||||| ||| ||||||| | |||||||||||||| |    
T  31023661 tacatccctgtaaaattttttttgttttaaaaatgtccctggccccacttcactggtgatgtggcatgggttttgccacgtagtagttgctgactgtgca 31023760  T
Q  803 agttttgccacgtggcgc 820  Q
    | || |||||||||||||    
T  31023761 acttctgccacgtggcgc 31023778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 722 - 787
Target Start/End: Original strand, 35151672 - 35151737
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagc--tgattttgcatggttttggccacgtggca 787  Q
    |||||||| ||||||||||||||||||||  ||||||  |||||| ||||||||||||||||||||||    
T  35151672 ttttgttttaaaaaggtctctggccccac--ttcagctgtgatttggcatggttttggccacgtggca 35151737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 816
Target Start/End: Original strand, 2320283 - 2320375
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtg 816  Q
    |||||| ||||||||| ||| ||||||| ||  |||||  | | |||||||||||||| ||||||||| |||||||| || ||||||||||||    
T  2320283 ttgttttaaaaaggtccctgaccccacttttttgctgacatgggatggttttggccacatggcagttgttgactgtgcaaattttgccacgtg 2320375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 695 - 818
Target Start/End: Complemental strand, 38914268 - 38914148
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||| ||||| |||||||||  ||||||||||||||||||| || ||||||||    | ||||||| ||||  |||| |||| |||||||||||||    
T  38914268 ctttgaaaaacatccctgtaaatt--tttttgtttgaaaaaggtccctcgccccacttccgatctgatttggcat-ttttttgccatgtggcagttgctg 38914172  T
Q  795 actgtgtaagttttgccacgtggc 818  Q
    ||| || || ||||||||| ||||    
T  38914171 actatgcaacttttgccacatggc 38914148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 703 - 818
Target Start/End: Complemental strand, 35989566 - 35989451
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| ||||||||| |||||||||| ||||| |||  ||||||||||     | |||| | |||||| | | |||||||||||||||||||||||| |    
T  35989566 tacatccctgtaaatttttttttgttttaaaaatgtccttggccccacttgattggtgatgtggcatgggtcttgccacgtggcagttgctgactgtgca 35989467  T
Q  803 agttttgccacgtggc 818  Q
    | || |||||||||||    
T  35989466 acttctgccacgtggc 35989451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 766 - 820
Target Start/End: Complemental strand, 2046662 - 2046608
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||| ||| |||||||||||||||||||||||| || || |||||||||||||    
T  2046662 gcatggattttgccacgtggcagttgctgactgtgcaacttctgccacgtggcgc 2046608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 699 - 752
Target Start/End: Original strand, 29626572 - 29626625
Alignment:
Q  699 gaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccacta 752  Q
    |||| ||||| ||||||| | |||||||||||||||||||| ||||||||||||    
T  29626572 gaaaaacatccctgtaaaattttttttgtttgaaaaaggtccctggccccacta 29626625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 724 - 764
Target Start/End: Complemental strand, 3099049 - 3099009
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattt 764  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  3099049 ttgtttgaaaaaggtctttggccccactatttagctgattt 3099009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 818
Target Start/End: Complemental strand, 15795647 - 15795595
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||| |||||||||||||||||||||||| || || |||||||||||    
T  15795647 gcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtggc 15795595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 625 - 681
Target Start/End: Original strand, 29096823 - 29096879
Alignment:
Q  625 gaaaggtttaaatatgataatcgtacttgtaattggcttcagttttgatttttgttc 681  Q
    ||||||||||||||||| |||||| | ||||||| | | ||||||||||||||||||    
T  29096823 gaaaggtttaaatatgaaaatcgtccatgtaatttggtccagttttgatttttgttc 29096879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 676
Target Start/End: Complemental strand, 6895259 - 6895212
Alignment:
Q  629 ggtttaaatatgataatcgtacttgtaattggcttcagttttgatttt 676  Q
    |||||||||||||||||||| ||||||||| | | |||||||||||||    
T  6895259 ggtttaaatatgataatcgtccttgtaatttggtccagttttgatttt 6895212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 679
Target Start/End: Complemental strand, 19432599 - 19432552
Alignment:
Q  632 ttaaatatgataatcgtacttgtaattggcttcagttttgatttttgt 679  Q
    ||||||||||||||||| | ||||||| | ||||||||||||||||||    
T  19432599 ttaaatatgataatcgttcctgtaatttggttcagttttgatttttgt 19432552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 1040748 - 1040798
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||| ||||| ||| |||||||| || ||||||||||||||    
T  1040748 atggttttggccacatggcaattgttgactgtgcaacttttgccacgtggc 1040798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 816
Target Start/End: Complemental strand, 7600954 - 7600896
Alignment:
Q  759 tgattttgcatggttttgg-ccacgtggcagttgctgactgtgtaagttttgccacgtg 816  Q
    |||||| ||| |||||||| ||||||||||||||||||||||| || || |||||||||    
T  7600954 tgatttggcaaggttttggaccacgtggcagttgctgactgtgcaacttatgccacgtg 7600896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 9189025 - 9189075
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||| ||||| |||||||||||||||||||||| || |||| |||||||||    
T  9189025 atggctttggtcacgtggcagttgctgactgtgcaacttttaccacgtggc 9189075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 818
Target Start/End: Complemental strand, 10091469 - 10091419
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||| |||||| |||||||||||||||| |||| || ||||||||||||||    
T  10091469 atggctttggcaacgtggcagttgctgattgtgcaacttttgccacgtggc 10091419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 772 - 825
Target Start/End: Original strand, 32693934 - 32693987
Alignment:
Q  772 ttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgccac 825  Q
    |||||||||||||||||||| ||| |||| || ||||||||| ||||| |||||    
T  32693934 ttttggccacgtggcagttgttgattgtgcaacttttgccacatggcgtgccac 32693987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 818
Target Start/End: Complemental strand, 32694523 - 32694482
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||| |||||||||||||||||| || ||||||||||||||    
T  32694523 gccacatggcagttgctgactgtgcaacttttgccacgtggc 32694482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 818
Target Start/End: Original strand, 40366407 - 40366448
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||| ||||||||||||||||||| || ||||||||||||||    
T  40366407 gccatgtggcagttgctgactgtgcaacttttgccacgtggc 40366448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 5e-34; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 723 - 817
Target Start/End: Original strand, 41723304 - 41723398
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  41723304 tttgtttgaaaaaggtctttggccccactattcagctgatttggcatggttttggccacgtggcagttgctgactgtgcaacttttgccatgtgg 41723398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 23154277 - 23154179
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| ||||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  23154277 ttttttgttttaaaaaggtccctggccccactattcaggtgaagtggcatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 23154179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 727 - 825
Target Start/End: Original strand, 30136196 - 30136294
Alignment:
Q  727 tttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgccac 825  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||| |||| || ||||||||||||||| |||||    
T  30136196 tttgaaaaaggtctctggtcccactattcagctgatttgacatggttttggccacgtggtagttgctgattgtgcaacttttgccacgtggcgtgccac 30136294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 704 - 818
Target Start/End: Complemental strand, 31618194 - 31618080
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaa 803  Q
    ||||| |||||| || |||||||||| ||||||||  ||||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| ||    
T  31618194 acatccctgtaattttttttttgtttcaaaaaggttcctggccccactattcagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaa 31618095  T
Q  804 gttttgccacgtggc 818  Q
     ||||||||||||||    
T  31618094 cttttgccacgtggc 31618080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 727 - 825
Target Start/End: Complemental strand, 40575825 - 40575727
Alignment:
Q  727 tttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgccac 825  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| || ||||||||||||||| |||||    
T  40575825 tttgaaaaaggtccctgaccccacaattcagctgattttgcatggttttggtcacatggcagttgctgactgtgaaacttttgccacgtggcgtgccac 40575727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 724 - 817
Target Start/End: Complemental strand, 11596535 - 11596442
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    ||||||||||||||||  || |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||| |||||||    
T  11596535 ttgtttgaaaaaggtcattgtccccactattcagctgatttggcatggttttggccacgtggcagttgctgattgtgcaacttttgacacgtgg 11596442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 724 - 825
Target Start/End: Original strand, 38938309 - 38938410
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    ||||||||||||||||| |  |||||||||||||||||||| || |||||||||||||||||||||| ||||||||| || |||||||| |||||| |||    
T  38938309 ttgtttgaaaaaggtctataaccccactattcagctgatttggcttggttttggccacgtggcagttactgactgtgcaacttttgccatgtggcgtgcc 38938408  T
Q  824 ac 825  Q
    ||    
T  38938409 ac 38938410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 695 - 818
Target Start/End: Original strand, 5875626 - 5875749
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||||||| |||||||| ||  |||||  | | |||||||||||||||||||||||||||    
T  5875626 ctttgaaaaacatccctgtaaatttttttttgtttgaaaaaggtctctagccccacttttttgctgacatggtatggttttggccacgtggcagttgctg 5875725  T
Q  795 actgtgtaagttttgccacgtggc 818  Q
    | |||| || |||||  |||||||    
T  5875726 aatgtgcaacttttgttacgtggc 5875749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 695 - 785
Target Start/End: Complemental strand, 42095042 - 42094954
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtgg 785  Q
    ||||||||||||||  ||||| ||  ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  42095042 ctttgaaatacatccatgtaattt--tttttgtttgaaaaaggtccctagccccactattcagctgattttgcatggttttgaccacgtgg 42094954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 695 - 820
Target Start/End: Complemental strand, 37321909 - 37321785
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    |||||||||||||| ||| ||||| ||||||||||||||| || | |||||||||| ||||||||||  | |||||  ||||| ||||||| ||||||||    
T  37321909 ctttgaaatacatccctgcaaatt-ttttttgtttgaaaatggcccctggccccacaattcagctgaagtggcatgactttggtcacgtggtagttgctg 37321811  T
Q  795 actgtgtaagttttgccacgtggcgc 820  Q
    |||||| || ||||||||| ||||||    
T  37321810 actgtgcaacttttgccacatggcgc 37321785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 723 - 819
Target Start/End: Original strand, 40142547 - 40142643
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||||||||||||| || ||| |||||||||||||||||||| ||||| ||||||| |||||||||||||| | |||| || |||| ||||||||||    
T  40142547 tttgtttgaaaaagatccctgaccccactattcagctgatttggcatgattttggctacgtggcagttgctaattgtgcaacttttaccacgtggcg 40142643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 696 - 818
Target Start/End: Complemental strand, 13388995 - 13388873
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    |||||||  |||| ||||||| | |||||||||||||||||||||||||||||||  ||  | | || | |||||| ||| |||||||||||||||||||    
T  13388995 tttgaaaagcatccctgtaaaattttttttgtttgaaaaaggtctctggccccacatttttgattatatggcatgggttttgccacgtggcagttgctga 13388896  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  13388895 ctgtgcaacttctgccacgtggc 13388873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 39528952 - 39529050
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||| |||||||||||| |  |  |||||  | | ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  39528952 ttttttgtttgaaaaagatctctggccccatttatttgctgacatggtatggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 39529050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 697 - 818
Target Start/End: Complemental strand, 39529555 - 39529433
Alignment:
Q  697 ttgaaatacatcgctgtaaatt-attttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    |||||| ||||| |||||| || |||||||||||||||||||| ||||||||||||    | ||||||| |||| ||||| ||||||||| ||||| |||    
T  39529555 ttgaaaaacatccctgtaattttattttttgtttgaaaaaggtatctggccccacttccgatctgatttggcattgtttttgccacgtggtagttgatga 39529456  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || ||||||||||||||    
T  39529455 ctgtgcaacttttgccacgtggc 39529433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 723 - 820
Target Start/End: Original strand, 10499952 - 10500049
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||||| ||||||||||  ||  | |||| | |||||||||| |||||||||||||||||||||||| || || |||||||||||||    
T  10499952 tttgtttgaaaaaggtccctggccccacatttttgatgatatggcatggtttttgccacgtggcagttgctgactgtgcaacttatgccacgtggcgc 10500049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 726 - 818
Target Start/End: Complemental strand, 3809584 - 3809492
Alignment:
Q  726 gtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||| |||||| || ||||||||||||||||| | |  | ||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  3809584 gttttaaaaagatccctggccccactattcagttaaagtggcatgattttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 3809492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 722 - 818
Target Start/End: Original strand, 16472386 - 16472482
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||| ||||||||| ||||||||||| ||  |||||  | | |||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  16472386 ttttgtttcaaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 16472482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 722 - 818
Target Start/End: Original strand, 16476957 - 16477053
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||| ||||||||| ||||||||||| ||  |||||  | | |||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  16476957 ttttgtttcaaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 16477053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 724 - 820
Target Start/End: Original strand, 30427177 - 30427273
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||| |||| ||| ||||| |||||||||||  | |||||| ||||||||||||||||||||||| |||| || ||||| ||||||||||    
T  30427177 ttgtttgaaaatggtccctgtccccaatattcagctgaagtagcatggctttggccacgtggcagttgctgattgtgcaacttttgtcacgtggcgc 30427273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 697 - 816
Target Start/End: Complemental strand, 5340534 - 5340415
Alignment:
Q  697 ttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgac 796  Q
    |||||| | ||| ||||||| | |||||||||||||||||||| ||||||||||  ||  | |||| | |||||| ||| ||||||||||||||||||||    
T  5340534 ttgaaaaatatccctgtaaaattttttttgtttgaaaaaggtccctggccccacatttttgatgatatggcatgggttttgccacgtggcagttgctgac 5340435  T
Q  797 tgtgtaagttttgccacgtg 816  Q
    |||| || || |||||||||    
T  5340434 tgtgcaacttctgccacgtg 5340415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 704 - 818
Target Start/End: Original strand, 23153623 - 23153737
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaa 803  Q
    ||||| ||||||||| |||||  ||| ||||||||| ||||||||||| ||  |||||  | | |||| ||||||||||||||||||| |||||||| ||    
T  23153623 acatccctgtaaattttttttaattttaaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggcagttgatgactgtgcaa 23153722  T
Q  804 gttttgccacgtggc 818  Q
     ||||||||||||||    
T  23153723 cttttgccacgtggc 23153737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 724 - 825
Target Start/End: Original strand, 7600936 - 7601036
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    ||||||||||||||||  || |||||| ||||||||||||| |||| |||| |||||| ||||||||||| |||||| || ||||||||||| ||| |||    
T  7600936 ttgtttgaaaaaggtccatgaccccaccattcagctgatttggcat-gtttcggccacatggcagttgctaactgtgcaaattttgccacgttgcgtgcc 7601034  T
Q  824 ac 825  Q
    ||    
T  7601035 ac 7601036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 703 - 820
Target Start/End: Complemental strand, 9123112 - 9122995
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| |||||||  ||||||||||| ||||| |||||||||||||||   |   |||| | |||||| ||| |||||||||||||||||||||||| |    
T  9123112 tacatccctgtaaaaaattttttgttttaaaaatgtctctggccccacttcgctagtgatgtggcatgggttttgccacgtggcagttgctgactgtgca 9123013  T
Q  803 agttttgccacgtggcgc 820  Q
    | || |||||||||||||    
T  9123012 acttctgccacgtggcgc 9122995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 704 - 818
Target Start/End: Original strand, 8390897 - 8391012
Alignment:
Q  704 acatcgctgtaaattatttttt-gtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    ||||| ||||||||| |||||| |||| ||||||||||||| ||||||||||||| |||  | ||||| |||||||||  | |||||||||||||||| |    
T  8390897 acatccctgtaaattttttttttgttttaaaaaggtctctgaccccactattcagttgaagtggcatgattttggccatatagcagttgctgactgtgca 8390996  T
Q  803 agttttgccacgtggc 818  Q
    | |||| ||| |||||    
T  8390997 acttttaccatgtggc 8391012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 696 - 818
Target Start/End: Original strand, 15224818 - 15224938
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| |||||||||  ||||||||||||||||||| ||||||||||  ||    |||| | |||||| ||| ||||||||| |||||||||    
T  15224818 tttgaaaaacatccctgtaaatt--tttttgtttgaaaaaggtccctggccccacattttttatgatatggcatgggttttgccacgtggtagttgctga 15224915  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  15224916 ctgtgcaacttctgccacgtggc 15224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 724 - 818
Target Start/End: Complemental strand, 30328869 - 30328775
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||||||||| ||||||||||| ||  |||||  | | |||| ||||||||||||||||||||||||||||  | ||||||||||||||    
T  30328869 ttgttttaaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcgacttttgccacgtggc 30328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 695 - 820
Target Start/End: Original strand, 5339933 - 5340058
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||| ||||||| |  |||||||||||||||||||  |  ||||||  ||  | |||| | |||||||||| ||||||||| ||||||||    
T  5339933 ctttgaattacatccctgtaaacttatttttgtttgaaaaaggtccataaccccacatttttgatgatatggcatggtttttgccacgtgggagttgctg 5340032  T
Q  795 actgtgtaagttttgccacgtggcgc 820  Q
    |||||| || || |||||||||||||    
T  5340033 actgtgcaacttatgccacgtggcgc 5340058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 723 - 819
Target Start/End: Complemental strand, 10500523 - 10500427
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||||||||| ||||||||||  ||| | |||| | |||||  ||| ||||||||| |||||||||||||| || || ||||||||||||    
T  10500523 tttgtttgaaaaaggtccctggccccacatttctgatgatatggcatgagttttgccacgtggtagttgctgactgtgcaaattctgccacgtggcg 10500427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 724 - 820
Target Start/End: Complemental strand, 15225390 - 15225294
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||||||||||||| ||||||||    | |||  | |||||||||| ||||||||||||| |||||||||| || || |||||||||||||    
T  15225390 ttgtttgaaaaaggtctctgaccccactaaaacgttgaagtggcatggtttttgccacgtggcagtcgctgactgtgcaacttatgccacgtggcgc 15225294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 696 - 820
Target Start/End: Original strand, 23404320 - 23404443
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| |||||| || |||||||||||||||| ||| ||||||||||||    | |||  | | |||||||| |||||||||||||||||||    
T  23404320 tttgaaaaacatccctgtaattttttttttgtttgaaaaatgtc-ctggccccactaaaacgttgaagtggaatggtttttgccacgtggcagttgctga 23404418  T
Q  796 ctgtgtaagttttgccacgtggcgc 820  Q
    ||||| |  || |||||||||||||    
T  23404419 ctgtgcagcttatgccacgtggcgc 23404443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 703 - 818
Target Start/End: Complemental strand, 11761730 - 11761615
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| ||||||||| |||||| ||| ||||| |||||||||||||||     | |||| | |||||| | | |||||||||||||||||||||||| |    
T  11761730 tacatccctgtaaatttttttttcttttaaaaatgtctctggccccacttcgttggtgatgtggcatgggtcttgccacgtggcagttgctgactgtgca 11761631  T
Q  803 agttttgccacgtggc 818  Q
    | || |||||||||||    
T  11761630 acttctgccacgtggc 11761615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 1982574 - 1982624
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||||    
T  1982574 atggttttggccacgtggcagttgctgactgtgcaacttttgccacatggc 1982624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 3809015 - 3809065
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  3809015 atggctttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 3809065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 723 - 825
Target Start/End: Original strand, 13388465 - 13388567
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgc 822  Q
    |||||||||||||||||  |||||||||||    | |||  | |||||||||| |||| |||||||||||||||||| ||| || ||||||||||| |||    
T  13388465 tttgtttgaaaaaggtccatggccccactaaaacgttgaagtggcatggtttttgccatgtggcagttgctgactgtataacttatgccacgtggcacgc 13388564  T
Q  823 cac 825  Q
    |||    
T  13388565 cac 13388567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 722 - 819
Target Start/End: Complemental strand, 17132705 - 17132608
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||||||| ||||| ||| |||||||||||   | | |||| | |||||| ||| |||||||||||||||||||||||| || || ||||||||||||    
T  17132705 ttttgttttaaaaatgtccctggccccacttcgctggtgatgtggcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtggcg 17132608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 697 - 750
Target Start/End: Complemental strand, 23404922 - 23404869
Alignment:
Q  697 ttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccac 750  Q
    |||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  23404922 ttgaaaaacatccctgtaaatttttttttgtttgaaaaaggtccctggccccac 23404869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 800
Target Start/End: Original strand, 24700517 - 24700593
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    |||||||||||||||| ||| ||||||  ||  | |||| | |||||||||| ||||||||||||||||||||||||    
T  24700517 ttgtttgaaaaaggtccctgaccccacatttttgatgatgtggcatggtttttgccacgtggcagttgctgactgtg 24700593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 731 - 818
Target Start/End: Complemental strand, 8977681 - 8977594
Alignment:
Q  731 aaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||| ||||||||||| ||  |||||  | | |||| ||||||||||||||||||| ||||||||  | ||||||||||||||    
T  8977681 aaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggcagttggtgactgtgcgacttttgccacgtggc 8977594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 724 - 787
Target Start/End: Original strand, 36186576 - 36186639
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggca 787  Q
    |||||||||||||||||||||||||||||||  |||||  | | ||| ||||||||||||||||    
T  36186576 ttgtttgaaaaaggtctctggccccactattttgctgacatggtatgtttttggccacgtggca 36186639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 723 - 818
Target Start/End: Original strand, 37727510 - 37727604
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||| |||||||||||    | ||||||| ||||  |||| ||||||||||||||||||||| || || ||||||||| ||||    
T  37727510 tttgtttgaaaaaggtccctggccccacttccgatctgatttggcat-ttttttgccacgtggcagttgctgactatgcaacttttgccacatggc 37727604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 724 - 787
Target Start/End: Complemental strand, 43938028 - 43937966
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggca 787  Q
    |||||||||||||||| || | ||||||||||| ||||||| |||| |||||||||||||||||    
T  43938028 ttgtttgaaaaaggtcactagtcccactattcaactgatttggcat-gttttggccacgtggca 43937966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 818
Target Start/End: Complemental strand, 36187142 - 36187049
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||| |||||||    | |||||||  ||| ||||| |||||||||||| ||||||||||| || |||||| |||||||    
T  36187142 ttgtttgaaaaaggtctctgaccccacttccgatctgatttgacattgtttttgccacgtggcag-tgctgactgtgcaacttttgctacgtggc 36187049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 768 - 818
Target Start/End: Complemental strand, 37727861 - 37727811
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||| ||||||||||||||||| ||  |||||||||||||    
T  37727861 atggttttggccacgcggcagttgctgactgtgcaacctttgccacgtggc 37727811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 725 - 818
Target Start/End: Original strand, 25211588 - 25211681
Alignment:
Q  725 tgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||| ||||||||| ||| ||||||| ||  |||||  | | ||||||||| |||||||| ||||||||||||||  | ||||||||||||||    
T  25211588 tgttttaaaaaggtccctgaccccacttttttgctgacatgggatggttttgaccacgtggaagttgctgactgtgcgacttttgccacgtggc 25211681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 818
Target Start/End: Original strand, 1939591 - 1939643
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||| |||||||||||||||||||||||| || || |||||||||||    
T  1939591 gcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtggc 1939643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 726 - 818
Target Start/End: Complemental strand, 7824875 - 7824783
Alignment:
Q  726 gtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||| ||||||||||||| ||||||| ||  |||||  | | |||| |||||||||| |||||||||||||||||  | ||||||| ||||||    
T  7824875 gttttaaaaaggtctctgaccccacttttttgctgacatgggatggctttggccacgaggcagttgctgactgtgcgacttttgccgcgtggc 7824783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 818
Target Start/End: Complemental strand, 9899576 - 9899524
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||| ||||||||||||||||||||||||||| || ||||| |||||    
T  9899576 gcatgggttttgccacgtggcagttgctgactgtgtaacttctgccatgtggc 9899524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 724 - 820
Target Start/End: Complemental strand, 32637871 - 32637775
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||||||||| |||||| |||||    | |||  | |||||||||| |||| ||||||||||||||| ||| || || |||||||||||||    
T  32637871 ttgtttgaaaaaggtccctggcctcactaaaacgttgaagtggcatggtttttgccatgtggcagttgctgaccgtgcaacttatgccacgtggcgc 32637775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 767 - 817
Target Start/End: Original strand, 14445375 - 14445425
Alignment:
Q  767 catggttttggccacgtggcagttgctgactgtgtaagttttgccacgtgg 817  Q
    ||||||||||||||| ||||||||||||| |||| || |||| ||||||||    
T  14445375 catggttttggccacttggcagttgctgattgtgcaacttttaccacgtgg 14445425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 696 - 750
Target Start/End: Complemental strand, 24701118 - 24701064
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccac 750  Q
    ||||||| ||| | ||||||||| |||||||||||||||||||| ||| ||||||    
T  24701118 tttgaaaaacaaccctgtaaatttttttttgtttgaaaaaggtccctgaccccac 24701064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 622 - 676
Target Start/End: Original strand, 40784799 - 40784853
Alignment:
Q  622 attgaaaggtttaaatatgataatcgtacttgtaattggcttcagttttgatttt 676  Q
    ||||| ||||||||||||||||||||| | ||||||| | | |||||||||||||    
T  40784799 attgataggtttaaatatgataatcgtccctgtaatttggtccagttttgatttt 40784853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 722 - 751
Target Start/End: Complemental strand, 1983100 - 1983071
Alignment:
Q  722 ttttgtttgaaaaaggtctctggccccact 751  Q
    ||||||||||||||||||||||||||||||    
T  1983100 ttttgtttgaaaaaggtctctggccccact 1983071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 818
Target Start/End: Complemental strand, 26636170 - 26636129
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||||||| || || |||||||||||    
T  26636170 gccacgtggcagttgctgactgtgcaacttctgccacgtggc 26636129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 1e-31; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 710 - 820
Target Start/End: Original strand, 21633717 - 21633827
Alignment:
Q  710 ctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttg 809  Q
    |||||||  ||||||||||| ||||||||| ||||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| || |||||    
T  21633717 ctgtaaaagattttttgttttaaaaaggtccctggccccactattcagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaacttttg 21633816  T
Q  810 ccacgtggcgc 820  Q
    |||||||||||    
T  21633817 ccacgtggcgc 21633827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 718 - 813
Target Start/End: Complemental strand, 29856720 - 29856625
Alignment:
Q  718 tattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccac 813  Q
    |||||||||||| ||||||||||||||||||||||||||| |||  | ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  29856720 tattttttgttttaaaaaggtctctggccccactattcagttgaagtggcatgattttggccacgtggcagttgctgactgtgtaacttttgccac 29856625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 703 - 819
Target Start/End: Complemental strand, 24051980 - 24051864
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| |||| || | |||||||||| ||||||||| |||||||||||     | |||||| ||| ||||||||||||||||||||||||||||||| |    
T  24051980 tacatccctgtgaaattttttttgttttaaaaaggtccctggccccacttccttggtgatttggcaaggttttggccacgtggcagttgctgactgtgca 24051881  T
Q  803 agttttgccacgtggcg 819  Q
    | |||||||||||||||    
T  24051880 acttttgccacgtggcg 24051864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 696 - 817
Target Start/End: Original strand, 476989 - 477109
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||| ||| ||||||  ||  | |||| | |||||| ||| |||||||||||||||| ||    
T  476989 tttgaaaaacatccctgtaaatt-ttttttgtttgaaaaaggtccctgaccccacatttttgatgatgtggcatgggttttgccacgtggcagttgccga 477087  T
Q  796 ctgtgtaagttttgccacgtgg 817  Q
    ||||| || |||||||||||||    
T  477088 ctgtgcaacttttgccacgtgg 477109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 720 - 815
Target Start/End: Complemental strand, 29844455 - 29844360
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgt 815  Q
    |||||||||| ||||||||| ||| ||||||||||||| |||  |||||||||||||  ||||| |||||||||||||||| || |||| ||||||    
T  29844455 ttttttgttttaaaaaggtccctgaccccactattcagttgaagttgcatggttttgatcacgtcgcagttgctgactgtgcaacttttaccacgt 29844360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 21634324 - 21634226
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||  |||||||| ||||||||||| ||  |||||  | | ||||||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  21634324 ttttttgttttcaaaaggtccctggccccacttttttgctgacatgggatggttttggccaggtggcagttgctgaatgtgtaacttttgccacgtggc 21634226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 703 - 820
Target Start/End: Complemental strand, 29979209 - 29979091
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgca-tggttttggccacgtggcagttgctgactgtgt 801  Q
    |||||| ||||||||| |||||||||| ||||||||| |||||||||||   | | |||| | ||| |  |||||||||||||||||||||||||||||     
T  29979209 tacatccctgtaaatttttttttgttttaaaaaggtccctggccccacttcgctggtgatgtggcaatatttttggccacgtggcagttgctgactgtgc 29979110  T
Q  802 aagttttgccacgtggcgc 820  Q
    || |||| |||||||||||    
T  29979109 aacttttaccacgtggcgc 29979091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 818
Target Start/End: Complemental strand, 17416777 - 17416672
Alignment:
Q  714 aaattattttttgtttgaaaaaggtctctggccccactattca-gctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgcca 812  Q
    ||||| |||||||||| ||||||||| ||| ||||||| ||   |||||  | | ||||||||||||||||||||||||||||||||| || ||||||||    
T  17416777 aaatttttttttgttttaaaaaggtccctgaccccactttttttgctgacatgggatggttttggccacgtggcagttgctgactgtgcaacttttgcca 17416678  T
Q  813 cgtggc 818  Q
    ||||||    
T  17416677 cgtggc 17416672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 710 - 820
Target Start/End: Original strand, 24051337 - 24051448
Alignment:
Q  710 ctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggtttt-ggccacgtggcagttgctgactgtgtaagtttt 808  Q
    ||||||||| |||||||||| ||||||||| |||||||||||   | | |||| | |||   |||| ||||||||||||||||||||||||| || ||||    
T  24051337 ctgtaaatttttttttgttttaaaaaggtccctggccccacttcgctggtgatgtggcaacatttttggccacgtggcagttgctgactgtgcaactttt 24051436  T
Q  809 gccacgtggcgc 820  Q
    ||||||||||||    
T  24051437 gccacgtggcgc 24051448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 696 - 818
Target Start/End: Complemental strand, 1175094 - 1174973
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||||||||| |||||||||| ||||||||| ||||||||||||    | |||  |  ||||||||| |||||||||||||||||||    
T  1175094 tttgaaaaacatc-ctgtaaatttttttttgttttaaaaaggtccctggccccactaaaacgttgaagtgacatggtttttgccacgtggcagttgctga 1174996  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || || ||||||||    
T  1174995 ctgtgcaacttatgtcacgtggc 1174973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 1823003 - 1823101
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||  ||| ||| |||||||||||||||||  | |||||  |||| |||||||| |||||||||||||| || ||||| ||||||||    
T  1823003 ttttttgtttgaaaatagtccctgaccccactattcagctgaagtggcatgactttgcccacgtggtagttgctgactgtgcaacttttgacacgtggc 1823101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 5956129 - 5956031
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| |||||||||| || ||| ||| ||  |||||| | | |||||||||||||||||| | |||||||||||| || ||||||||||||||    
T  5956129 ttttttgttttaaaaaggtctatgaccctacttttttgctgatatgggatggttttggccacgtggaaattgctgactgtgcaacttttgccacgtggc 5956031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 724 - 819
Target Start/End: Original strand, 16706249 - 16706344
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||||| ||||| ||| |||  |||||||||||| |||  | |||||||||||| ||| |||||||||||||||||| || ||||| |||||||||    
T  16706249 ttgtttcaaaaacgtccctgatcccactattcagttgaagtggcatggttttggtcacatggcagttgctgactgtgcaacttttgtcacgtggcg 16706344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 696 - 818
Target Start/End: Complemental strand, 31170853 - 31170731
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| | ||| |||||| || ||||||||||||||||||||  |||||||||  ||  |  ||| |  ||||| ||| |||||||||||||||||||    
T  31170853 tttgaaaaatatccctgtaattttttttttgtttgaaaaaggtccatggccccacatttttgaagatatgacatgggttttgccacgtggcagttgctga 31170754  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  31170753 ctgtgcaacttatgccacgtggc 31170731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 767 - 818
Target Start/End: Complemental strand, 477568 - 477517
Alignment:
Q  767 catggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||| |||||||||||||||||||||||| || || |||||||||||    
T  477568 catggtttttgccacgtggcagttgctgactgtgcaacttatgccacgtggc 477517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 749 - 800
Target Start/End: Original strand, 544459 - 544509
Alignment:
Q  749 actattcagctgattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  544459 actattcagctgatttggcatg-ttttggccatgtggcagttgctgactgtg 544509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 703 - 818
Target Start/End: Complemental strand, 9699141 - 9699026
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| ||||||| | |||||||||| ||||| ||| |||||||||||     | |||| | |||||| | | |||||||||||||||||||||||| |    
T  9699141 tacatccctgtaaaattttttttgttttaaaaatgtccctggccccacttcgttggtgatgtggcatgggtcttgccacgtggcagttgctgactgtgca 9699042  T
Q  803 agttttgccacgtggc 818  Q
    | || |||||||||||    
T  9699041 acttctgccacgtggc 9699026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 759 - 818
Target Start/End: Complemental strand, 22353197 - 22353137
Alignment:
Q  759 tgattttgcatggttttgg-ccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||| |||||||| ||||||||||||||||||||||| || || |||||||||||    
T  22353197 tgatttggcaaggttttgggccacgtggcagttgctgactgtgcaacttatgccacgtggc 22353137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 815
Target Start/End: Original strand, 29843877 - 29843924
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgt 815  Q
    |||| |||||||||||||||||||||||||||| || |||||| ||||    
T  29843877 atggctttggccacgtggcagttgctgactgtgcaacttttgcgacgt 29843924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 818
Target Start/End: Original strand, 34730033 - 34730128
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||| ||||| ||| |||||||||||   | | |||| | |||| | ||| |||||||||||||||||||||||| || || |||||||||||    
T  34730033 tttgttttaaaaatgtccctggccccacttcactggtgatgtggcataggttttgccacgtggcagttgctgactgtgcaacttctgccacgtggc 34730128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 759 - 820
Target Start/End: Complemental strand, 18493632 - 18493570
Alignment:
Q  759 tgattttgcatggttttgg-ccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||| ||| |||||||| ||||||||||||| ||||||||| || || |||||||||||||    
T  18493632 tgatttggcaaggttttgggccacgtggcagttactgactgtgcaacttatgccacgtggcgc 18493570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 781 - 818
Target Start/End: Complemental strand, 14350813 - 14350776
Alignment:
Q  781 cgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||| || ||||||||||||||    
T  14350813 cgtggcagttgctgactgtgcaacttttgccacgtggc 14350776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 5e-31; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 696 - 825
Target Start/End: Original strand, 26828830 - 26828959
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    |||||||||||||  ||||| || ||||||||||||||||| || |||  ||||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  26828830 tttgaaatacatccttgtaattttttttttgtttgaaaaagctccctgatcccactattcatctgatttggcattgttttggccacgtggcagttgctga 26828929  T
Q  796 ctgtgtaagttttgccacgtggcgcgccac 825  Q
    ||||| || |||||||| |||||| |||||    
T  26828930 ctgtgcaacttttgccatgtggcgtgccac 26828959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 724 - 825
Target Start/End: Complemental strand, 44477956 - 44477855
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgcc 823  Q
    |||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||| || |||| |||||||||| |||    
T  44477956 ttgtttgaaaaaggtccctggccccactattcagctaatttggcatggttttggccacacggcagttgctgactgtgcaacttttaccacgtggcgtgcc 44477857  T
Q  824 ac 825  Q
    ||    
T  44477856 ac 44477855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 700 - 786
Target Start/End: Complemental strand, 41345423 - 41345336
Alignment:
Q  700 aaatacatcgctgtaaat-tattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggc 786  Q
    ||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41345423 aaatacatccctgtaaaaatcttttttgtttgaaaaaggtctctggccccactattcagctgatttggcatggttttggccacgtggc 41345336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 724 - 818
Target Start/End: Original strand, 7945425 - 7945519
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| |||||||||||||||||||||||| || |||  | ||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  7945425 ttgttttaaaaaggtctctggccccactattaagttgaagtggcatggttttggccacgtggcagttgctgactgtgcaatttttgccacgtggc 7945519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 723 - 825
Target Start/End: Original strand, 24699305 - 24699407
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgc 822  Q
    |||||||||||||||   |||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||||| ||    
T  24699305 tttgtttgaaaaaggatcctggacccactattaagctgatttggcatgattttggccacgtggcagttgctgactgtgcaacttttgccacgtggcgtgc 24699404  T
Q  823 cac 825  Q
    |||    
T  24699405 cac 24699407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 703 - 819
Target Start/End: Original strand, 23966390 - 23966506
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| ||||||||| |||||||||| ||||||||| |||||||||||     | |||||| ||| ||||||||||||||||||||||||||||||| |    
T  23966390 tacatccctgtaaatttttttttgttttaaaaaggtccctggccccacttccttggtgatttggcaaggttttggccacgtggcagttgctgactgtgca 23966489  T
Q  803 agttttgccacgtggcg 819  Q
    | |||||||||||||||    
T  23966490 acttttgccacgtggcg 23966506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 704 - 825
Target Start/End: Complemental strand, 38086328 - 38086207
Alignment:
Q  704 acatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaa 803  Q
    ||||| |||||| || |||||||||| || |||||| ||| ||| ||||||||| |||  |  |||||||||||||||||||||||||||||||||| ||    
T  38086328 acatccctgtaattttttttttgttttaacaaggtccctgaccctactattcagttgaagtgacatggttttggccacgtggcagttgctgactgtgcaa 38086229  T
Q  804 gttttgccacgtggcgcgccac 825  Q
     ||||||||||||||| |||||    
T  38086228 cttttgccacgtggcgtgccac 38086207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 723 - 819
Target Start/End: Original strand, 4706729 - 4706825
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||| |||||||||||||||||||||     | |||||| ||| ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  4706729 tttgttttaaaaaggtctctggccccacttcattggtgatttggcaaggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcg 4706825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 724 - 818
Target Start/End: Complemental strand, 25609086 - 25608992
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||| ||||||||||| ||  |||||  | | |||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  25609086 ttgtttgaaaaaggtcactggccccacttttttgctgacatggtatggttttggccacgtggcagttgcttactgtgcaacttttgccacgtggc 25608992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 695 - 820
Target Start/End: Original strand, 26585541 - 26585666
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||| |||||||  |  |||||||||||||||||||||||||||||||    | |||  | |||| ||||| ||||||||||||||||||    
T  26585541 ctttgaattacatccctgtaaaaaaaattttgtttgaaaaaggtctctggccccactaaaacgttgaagtggcatagtttttgccacgtggcagttgctg 26585640  T
Q  795 actgtgtaagttttgccacgtggcgc 820  Q
    |||||| || || |||||||||||||    
T  26585641 actgtgcaacttatgccacgtggcgc 26585666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 724 - 784
Target Start/End: Complemental strand, 34457465 - 34457405
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtg 784  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  34457465 ttgtttgaaaaaggtctccggccccactattcagctgatttgacatggttttggccacgtg 34457405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 696 - 820
Target Start/End: Original strand, 42276597 - 42276721
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| ||||||| | |||||||||||||||||||| |||||||||   ||  | |||| | |||||| ||| |||||||||||||||||||    
T  42276597 tttgaaaaacatccctgtaaaattttttttgtttgaaaaaggtccctggccccatatttttgatgatatggcatgggttttgccacgtggcagttgctga 42276696  T
Q  796 ctgtgtaagttttgccacgtggcgc 820  Q
     |||| || || |||||||||||||    
T  42276697 ttgtgcaacttctgccacgtggcgc 42276721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 695 - 818
Target Start/End: Complemental strand, 48540730 - 48540608
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||| |||||||  ||||||||||||||||||||| ||||||||||||    | |||  | |||||||||| ||||||||||||||||||    
T  48540730 ctttgaattacatc-ctgtaaaaaattttttgtttgaaaaaggtccctggccccactaaaacgttgaagtggcatggtttttgccacgtggcagttgctg 48540632  T
Q  795 actgtgtaagttttgccacgtggc 818  Q
    |||||| || ||  ||||||||||    
T  48540631 actgtgcaacttaggccacgtggc 48540608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 696 - 820
Target Start/End: Original strand, 41567402 - 41567525
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||    | |||  | | || ||||| |||| ||||||||||||||    
T  41567402 tttgaaaaacatccctgtaaaaaattttttgtttgaaaaaggtctctggccccactaaaacgttgaagtggtat-gtttttgccatgtggcagttgctga 41567500  T
Q  796 ctgtgtaagttttgccacgtggcgc 820  Q
    ||||| || || |||||||||||||    
T  41567501 ctgtgcaacttatgccacgtggcgc 41567525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 727 - 818
Target Start/End: Original strand, 6822702 - 6822793
Alignment:
Q  727 tttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||| ||| ||  ||||||||||| |||| ||||| |||| | |||||||||||||||||||||| || |||||||| |||||    
T  6822702 tttgaaaaaggtcactgaccttactattcagctaatttggcatgattttaggcacgtggcagttgctgactgtgcaacttttgccatgtggc 6822793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 724 - 818
Target Start/End: Original strand, 12782857 - 12782951
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||| ||||||||| ||||||||||| ||  |||||  | | |||| ||||||||||||||||||||||||||||  | ||||||||||||||    
T  12782857 ttgttttaaaaaggtccctggccccacttttttgctgacatgggatggctttggccacgtggcagttgctgactgtgcgacttttgccacgtggc 12782951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 695 - 817
Target Start/End: Complemental strand, 16779786 - 16779665
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctg 794  Q
    ||||||| |||||| |||||||   ||||||| |||||||||||| |||||||||| |||    |||| | |||||||||| ||||||||||||||||||    
T  16779786 ctttgaattacatccctgtaaaaatttttttgattgaaaaaggtccctggccccac-atttttttgatgtggcatggtttttgccacgtggcagttgctg 16779688  T
Q  795 actgtgtaagttttgccacgtgg 817  Q
    |||||| || || ||||| ||||    
T  16779687 actgtgcaacttatgccatgtgg 16779665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 723 - 793
Target Start/End: Original strand, 40193954 - 40194023
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgct 793  Q
    ||||||||||||||||| ||| || |||||||||||||||||  ||||||||||||||| |||||||||||    
T  40193954 tttgtttgaaaaaggtc-ctgacctcactattcagctgatttgacatggttttggccacatggcagttgct 40194023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 768 - 818
Target Start/End: Complemental strand, 43210638 - 43210588
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  43210638 atggttttggccacgtggcagttgctgactgtgcaacttttgccacgtggc 43210588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 772 - 820
Target Start/End: Complemental strand, 4707381 - 4707333
Alignment:
Q  772 ttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  4707381 ttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcgc 4707333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 696 - 752
Target Start/End: Complemental strand, 21985568 - 21985512
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccacta 752  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  21985568 tttgaaaaacatccctgtaaatttttttttgtttgaaaaaggtccctggccccacta 21985512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 766 - 820
Target Start/End: Original strand, 28763113 - 28763167
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||| |||||||||||||||||||||||| || || |||||||||||||    
T  28763113 gcatggtttttgccacgtggcagttgctgactgtgcaacttatgccacgtggcgc 28763167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 44372580 - 44372482
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||||||| ||||||| ||  |||||  | | ||   ||||||||||||||||||||||| |||| || ||||||||||||||    
T  44372580 ttttttgttttaaaaaggtctctgaccccacttttttgctgacatgggattactttggccacgtggcagttgctgattgtgcaacttttgccacgtggc 44372482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 720 - 818
Target Start/End: Complemental strand, 44381436 - 44381338
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||||||| ||||||| ||  |||||  | | ||   ||||||||||||||||||||||| |||| || ||||||||||||||    
T  44381436 ttttttgttttaaaaaggtctctgaccccacttttttgctgacatgggattactttggccacgtggcagttgctgattgtgcaacttttgccacgtggc 44381338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 723 - 819
Target Start/End: Complemental strand, 46196706 - 46196621
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||||||||| ||| ||||||||||||||||||||           |||||||| |||||||||||||||| || |||||||||||||||    
T  46196706 tttgtttgaaaaaggtccctgaccccactattcagctgattt-----------ggccacgtcgcagttgctgactgtgcaacttttgccacgtggcg 46196621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 695 - 764
Target Start/End: Original strand, 32497068 - 32497137
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattt 764  Q
    |||||||||| ||| ||||||| |  ||||||||||||||||||| ||| |||||||||||| |||||||    
T  32497068 ctttgaaatatatccctgtaaaattatttttgtttgaaaaaggtccctgaccccactattcatctgattt 32497137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 723 - 800
Target Start/End: Original strand, 39459103 - 39459180
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    ||||||| ||||||||||||||||||||| ||  |||||  | | |||| |||||||| |||||||||||||||||||    
T  39459103 tttgttttaaaaaggtctctggccccacttttttgctgacatgggatggctttggccatgtggcagttgctgactgtg 39459180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 820
Target Start/End: Complemental strand, 40194626 - 40194530
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||||||||||||||||||||||    ||||| || ||||| | || |||||||| |||||| |||||||| || ||||| || |||||||    
T  40194626 ttgtttgaaaaaggtctctggccccactacatggctgacttggcatgttattcgccacgtgtcagttgttgactgtgcaacttttgtcatgtggcgc 40194530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 720 - 818
Target Start/End: Original strand, 38085649 - 38085748
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattca-gctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||||||| ||||||| ||   |||||  | | |||| |||| ||||||| ||||||||||||||| || ||||||||||||||    
T  38085649 ttttttgttttaaaaaggtctctgaccccactttttttgctgacatgggatggctttgaccacgtgacagttgctgactgtgcaacttttgccacgtggc 38085748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 766 - 820
Target Start/End: Original strand, 3842650 - 3842704
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||| ||| |||||||||||||||||||||||| || || |||||||||||||    
T  3842650 gcatggattttgccacgtggcagttgctgactgtgcaacttctgccacgtggcgc 3842704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 696 - 750
Target Start/End: Complemental strand, 11337702 - 11337648
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccac 750  Q
    ||||||| ||||| ||||||| | |||||||||||||||||||| ||||||||||    
T  11337702 tttgaaaaacatccctgtaaaattttttttgtttgaaaaaggtccctggccccac 11337648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 696 - 750
Target Start/End: Complemental strand, 41567914 - 41567860
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccac 750  Q
    ||||||| ||||| ||||||||| ||||||||||||||||| || ||||||||||    
T  41567914 tttgaaaaacatccctgtaaatttttttttgtttgaaaaagatccctggccccac 41567860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 766 - 820
Target Start/End: Original strand, 46468237 - 46468291
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||| ||| |||||||||||||||||||||||| || || |||||||||||||    
T  46468237 gcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtggcgc 46468291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 766 - 819
Target Start/End: Complemental strand, 20016668 - 20016615
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    |||||| ||| |||||||||||||||||||||||| || || ||||||||||||    
T  20016668 gcatgggttttgccacgtggcagttgctgactgtgcaacttctgccacgtggcg 20016615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 713 - 750
Target Start/End: Complemental strand, 35089007 - 35088970
Alignment:
Q  713 taaattattttttgtttgaaaaaggtctctggccccac 750  Q
    |||||| |||||||||||||||||||||||||||||||    
T  35089007 taaatttttttttgtttgaaaaaggtctctggccccac 35088970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 704 - 820
Target Start/End: Original strand, 43210212 - 43210329
Alignment:
Q  704 acatcgctgtaaat-tattttttgtttgaaaaaggtctctggccccactattcagct--gattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    ||||| |||||||| | |||||| ||| ||||||||||||| |||||||  |||| |  ||||| | ||||||| ||||| |||||||||||||||| ||    
T  43210212 acatccctgtaaatattttttttattttaaaaaggtctctgaccccact--tcagttatgatttggtatggtttgggccatgtggcagttgctgactatg 43210309  T
Q  801 taagttttgccacgtggcgc 820  Q
     || |||||||| |||||||    
T  43210310 caacttttgccatgtggcgc 43210329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 724 - 800
Target Start/End: Complemental strand, 28763539 - 28763463
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    ||||||||||||||||||| |||||||  ||  | |||| | |||||| |||  |||||||||||||||||||||||    
T  28763539 ttgtttgaaaaaggtctctagccccacatttttgatgatatggcatgggttttaccacgtggcagttgctgactgtg 28763463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 766 - 818
Target Start/End: Complemental strand, 46468688 - 46468636
Alignment:
Q  766 gcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||| ||||||||| |||||||||||||| || || |||||||||||    
T  46468688 gcatggtttttgccacgtggtagttgctgactgtgcaacttatgccacgtggc 46468636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 777 - 820
Target Start/End: Original strand, 11337183 - 11337226
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    |||||||||||||||||||||||| || || |||||||||||||    
T  11337183 gccacgtggcagttgctgactgtgcaacttatgccacgtggcgc 11337226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 772 - 818
Target Start/End: Original strand, 35088516 - 35088562
Alignment:
Q  772 ttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||| |||||||||||||||||||||||| || || |||||||||||    
T  35088516 tttttgccacgtggcagttgctgactgtgcaacttgtgccacgtggc 35088562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 818
Target Start/End: Original strand, 34456806 - 34456847
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||||| |||||||||||||| || ||||||||||||||    
T  34456806 gccacgtggtagttgctgactgtgcaacttttgccacgtggc 34456847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 822
Target Start/End: Original strand, 48540155 - 48540200
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggcgcgc 822  Q
    |||||||| ||||||||||||||| || || |||||||||||||||    
T  48540155 gccacgtgacagttgctgactgtgcaacttctgccacgtggcgcgc 48540200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 66; Significance: 1e-28; HSPs: 3)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 718 - 815
Target Start/End: Complemental strand, 2922 - 2825
Alignment:
Q  718 tattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgt 815  Q
    |||||||||||| ||||||||||||||||||||||||||| |||  | ||||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  2922 tattttttgttttaaaaaggtctctggccccactattcagttgaagtggcatgattttggccacgtggcagttgctgactgtgtaacttttaccacgt 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 718 - 815
Target Start/End: Complemental strand, 661 - 564
Alignment:
Q  718 tattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgt 815  Q
    |||||||||||| ||||||||| ||| ||||||||||||| |||  |||||||||||||  ||||| |||||||||||||||| || |||| ||||||    
T  661 tattttttgttttaaaaaggtccctgaccccactattcagttgaagttgcatggttttgatcacgtcgcagttgctgactgtgcaacttttaccacgt 564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 815
Target Start/End: Original strand, 2561 - 2608
Alignment:
Q  768 atggttttggccacgtggcagttgctgactgtgtaagttttgccacgt 815  Q
    |||| |||||||||||||||||||||||||||| || |||||| ||||    
T  2561 atggctttggccacgtggcagttgctgactgtgcaacttttgcgacgt 2608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 65; Significance: 5e-28; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 703 - 819
Target Start/End: Complemental strand, 11123 - 11007
Alignment:
Q  703 tacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgta 802  Q
    |||||| ||||||||| |||||||||| ||||||||| ||||||||||| |   | |||||| ||| ||||||||||||||||||||||||||||||| |    
T  11123 tacatccctgtaaatttttttttgttttaaaaaggtccctggccccactttcttggtgatttggcaaggttttggccacgtggcagttgctgactgtgca 11024  T
Q  803 agttttgccacgtggcg 819  Q
    | |||||||||||||||    
T  11023 acttttgccacgtggcg 11007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 772 - 820
Target Start/End: Original strand, 10451 - 10499
Alignment:
Q  772 ttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  10451 ttttggccacgtggcagttgctgactgtgcaacttttgccacgtggcgc 10499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1636 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold1636
Description:

Target: scaffold1636; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 724 - 800
Target Start/End: Original strand, 1436 - 1512
Alignment:
Q  724 ttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtg 800  Q
    |||||| ||| ||||||||||||||||| || ||||||  ||| |||||||||||||||||||||||||||||||||    
T  1436 ttgttttaaagaggtctctggccccacttttgagctgacattggatggttttggccacgtggcagttgctgactgtg 1512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 696 - 818
Target Start/End: Original strand, 28351 - 28472
Alignment:
Q  696 tttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctga 795  Q
    ||||||| || || ||||||||| |||||||||||||||||||| ||||||||||  ||  | |||| | |||||| ||| ||||||||| |||||||||    
T  28351 tttgaaaaacttccctgtaaatt-ttttttgtttgaaaaaggtccctggccccacatttttgatgatatggcatgggttttgccacgtggtagttgctga 28449  T
Q  796 ctgtgtaagttttgccacgtggc 818  Q
    ||||| || || |||||||||||    
T  28450 ctgtgcaacttctgccacgtggc 28472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 715 - 820
Target Start/End: Complemental strand, 35240 - 35135
Alignment:
Q  715 aattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacg 814  Q
    |||| |||||||||||||||||||| ||||||| |||    | ||||||| |||| ||||| |||||||| ||||||||||||||| || ||||| ||||    
T  35240 aatttttttttgtttgaaaaaggtccctggccctacttccgatctgatttggcattgtttttgccacgtgacagttgctgactgtgcaacttttggcacg 35141  T
Q  815 tggcgc 820  Q
    ||||||    
T  35140 tggcgc 35135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 769 - 818
Target Start/End: Original strand, 34661 - 34710
Alignment:
Q  769 tggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    ||||||| ||||||||||||||||||||| || || ||||||||||||||    
T  34661 tggttttagccacgtggcagttgctgactatgaaacttttgccacgtggc 34710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 695 - 785
Target Start/End: Original strand, 135549 - 135639
Alignment:
Q  695 ctttgaaatacatcgctgtaaattattttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtgg 785  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||  ||  | |||| | |||||||||| |||||||||    
T  135549 ctttgaattacatccctgtaaatttttttttgtttgaaaaaggtccctggccccacatttttgatgatgtggcatggtttttgccacgtgg 135639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 721 - 750
Target Start/End: Complemental strand, 135963 - 135934
Alignment:
Q  721 tttttgtttgaaaaaggtctctggccccac 750  Q
    ||||||||||||||||||||||||||||||    
T  135963 tttttgtttgaaaaaggtctctggccccac 135934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 723 - 820
Target Start/End: Original strand, 975 - 1071
Alignment:
Q  723 tttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcgc 820  Q
    ||||||||||||||||| ||||||||||  ||  | |||| | |||||| |||| ||||||||||||||||||||||| || || |||||| ||||||    
T  975 tttgtttgaaaaaggtccctggccccacatttttgatgatatggcatggatttg-ccacgtggcagttgctgactgtgcaacttctgccacatggcgc 1071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 720 - 820
Target Start/End: Complemental strand, 17109 - 17010
Alignment:
Q  720 ttttttgtttgaaaaaggtctctggccccactattcagctgattttgcatggttttggccacgtggcagttgctgactgtgtaagttttgccacgtggcg 819  Q
    ||||||||||||||||||| |||  |||||||||||||||||||| |||  ||||||  ||| ||||||||| | | ||||||| || ||| ||||||||    
T  17109 ttttttgtttgaaaaaggtttcta-ccccactattcagctgatttggcagagttttgatcacttggcagttgattagtgtgtaacttctgcaacgtggcg 17011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 818
Target Start/End: Complemental strand, 953 - 912
Alignment:
Q  777 gccacgtggcagttgctgactgtgtaagttttgccacgtggc 818  Q
    |||||||||||||||||||||||| || || |||||||||||    
T  953 gccacgtggcagttgctgactgtgcaacttctgccacgtggc 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University