View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4675_low_13 (Length: 224)
Name: NF4675_low_13
Description: NF4675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4675_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 31013068 - 31013224
Alignment:
| Q |
39 |
caaaggtagaaaaatacttttacttccataaatcatgagttgaattttccttcttattctccacttgctggtcctcatcatccccttcttgttaagttta |
138 |
Q |
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| T |
31013068 |
caaaggtagaaaaatacttttacttccataaatcatgagttgaattttccttcttattctccccttagtggtcctcatcatccccttcttgttaagttta |
31013167 |
T |
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| Q |
139 |
gccttaaccaagtaaagagaattctctgccacaattcagaggcaaaatcaacactat |
195 |
Q |
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|| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
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| T |
31013168 |
gcgttaaccaagtaaagagaattctctgccacaattcagagacaaaaacaacactat |
31013224 |
T |
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