View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4676_high_21 (Length: 261)
Name: NF4676_high_21
Description: NF4676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4676_high_21 |
 |  |
|
| [»] scaffold1838 (3 HSPs) |
 |  |  |
|
| [»] scaffold0041 (2 HSPs) |
 |  |  |
|
| [»] scaffold0013 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 40729356 - 40729205
Alignment:
| Q |
14 |
agaaagatgaaaatgtgagtttgtgaaatgatggacttttggttgtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggc-ggttataa |
112 |
Q |
| |
|
||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||| |
|
|
| T |
40729356 |
agaaagatgaacatgtgaatttgtgaaatggtggacttttggttgtgtgtttgatgatgcgttaatatttgactgtaattgtcttagtggcaggttataa |
40729257 |
T |
 |
| Q |
113 |
ttatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
40729256 |
ttatattctgtgtggtgccttagtggcgggttttagtctgcattttcatgat |
40729205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 252
Target Start/End: Complemental strand, 18292680 - 18292410
Alignment:
| Q |
5 |
aaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggttgtgtgtttgatgatgcattaatatttgagt-----------gtaatt |
93 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
18292680 |
aaagaaaagagaaagatgaaaatgtgagtttgtgaaatgattgacggttggttgtgtgtttgatgatgcattaatatttggttaatatttggctgtaatt |
18292581 |
T |
 |
| Q |
94 |
gccttagtggcgg-ttataattatat-tctgtgtggtgccttagtggcgggttttaatctgcatttt--------catgattga---gttttaatctgca |
180 |
Q |
| |
|
|||||||||| || ||| ||||||| |||||| ||||||||||||||||||| |||| | ||||| | | | || |||||| |||||| |
|
|
| T |
18292580 |
gccttagtggtgggttaatattatatatctgtggggtgccttagtggcgggttataat-tatattttgtgtggtgccttagtggcgggttttagtctgca |
18292482 |
T |
 |
| Q |
181 |
ttttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
18292481 |
ttttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattctgtgt |
18292410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 40729227 - 40729146
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctg |
249 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| |
|
|
| T |
40729227 |
gttttagtctgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggtggaaattgcaattatattctg |
40729146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 36732125 - 36732029
Alignment:
| Q |
11 |
aagagaaagatgaaaatgtgagtttgtgaaatgatggacttttgg-ttgtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggcgg |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| |||| |||||||||||||| ||||| |
|
|
| T |
36732125 |
aagagaaagatgaaaatgtgagtttgtgaaatgattgacttttggtttgtgtgcgtgatgatgcattaatacttgattgtaattgccttaggggcgg |
36732029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 40447722 - 40447818
Alignment:
| Q |
11 |
aagagaaagatgaaaatgtgagtttgtgaaatgatggacttttgg-ttgtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggcgg |
106 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
40447722 |
aagaaaaagatgataatgtgagtttgtgaaatgattgacttttggtttgtgtacttgatgatgcattaatacttgactgtaattgccttagtggcgg |
40447818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 40447887 - 40447967
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
40447887 |
gttttagtttgcattttcatgatcatgcatgtcatatgcatctgtgtggtgccttagtggcgggatttgcaattatattct |
40447967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 41340053 - 41339973
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| ||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
41340053 |
gttttagtcttcattttcatgaccatgcatggcatatgcacctgtgtggtgccttagtggcgggaattgcaattatattct |
41339973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 34397604 - 34397535
Alignment:
| Q |
183 |
ttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||||| |
|
|
| T |
34397604 |
ttcatgatcatgcatggtatatgcatctgtgtggtgccttagtggcagaaattgcaattatattctgtgt |
34397535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 34397667 - 34397603
Alignment:
| Q |
93 |
tgccttagtggcgg-ttataattatattctgtgtggtgccttagtggcgggttttaatctgcatt |
156 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
34397667 |
tgccttagtggcgggttataattatattctgtgtggtgccttagtggcgggttttagtctgcatt |
34397603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 40447850 - 40447909
Alignment:
| Q |
105 |
ggttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
40447850 |
ggttataattatattttgtgtggtgccttagtggcgggttttagtttgcattttcatgat |
40447909 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 12774181 - 12774137
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcgcctta |
223 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
12774181 |
cattttcatgatcatgcatcgcatatgcatctgtgtggtgcctta |
12774137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 28266910 - 28266832
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgcatggcatatgcatctgtgtgg-cgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||| ||| |||||| ||||||||||||||||||||||||| ||||| | |||||||||||| ||| |||||||||||| |
|
|
| T |
28266910 |
tttagtcttcattttaatgatcatgcatggcatatgcatctatgtggatgtcttagtggcggg-attacaattatattct |
28266832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 44789002 - 44789053
Alignment:
| Q |
180 |
attttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcggg |
231 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||| |||||||| |
|
|
| T |
44789002 |
attttcatgatcatgcaaggcatatgcatctgtgtggtgcctgtgtggcggg |
44789053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 44788932 - 44788982
Alignment:
| Q |
93 |
tgccttagtggcgg-ttataattatattctgtgtggtgccttagtggcggg |
142 |
Q |
| |
|
||||||||||| || ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
44788932 |
tgccttagtggagggttacaattatattctgtgtggtgccttagtggcggg |
44788982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 35670541 - 35670504
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtgg |
216 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
35670541 |
cattttcatgatcatgcatagcatatgcatctgtgtgg |
35670504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 41340071 - 41340032
Alignment:
| Q |
124 |
gtggtgccttagtggcgggttttaatctgcattttcatga |
163 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
41340071 |
gtggtgccttagtggcgggttttagtcttcattttcatga |
41340032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 40447976 - 40448004
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
40447976 |
gccttagtggcgggaattgcaattatatt |
40448004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 40729138 - 40729110
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
40729138 |
gccttagtggcgggaattgcaattatatt |
40729110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1838 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold1838
Description:
Target: scaffold1838; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 448 - 614
Alignment:
| Q |
1 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggttg-tgtgttt-gatgatgcattaatatttgagtgtaattgcctt |
98 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||| |||||||||||| |
|
|
| T |
448 |
aattaaagaaaagagaaagttgaaaatgtgagtttgtgaaatgatgaacttttggttggtgtgttttgatgatgtgttaatatttgactgtaattgcctt |
547 |
T |
 |
| Q |
99 |
agtggcgg-ttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
548 |
agtggcgggttataattatattctgtgtggtgccttagtggcgagttttagtctgcattttcatgat |
614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1838; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 590 - 676
Alignment:
| Q |
166 |
gagttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||||||||||| |||||| |||||||||| |||||||||||||||| ||||||| |
|
|
| T |
590 |
gagttttagtctgcattttcatgatcatgaaaggcatatgcatttgtgtgatgccttagtggtgggaattgcaattatagtctgtgt |
676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1838; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 681 - 714
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatattctgtg |
251 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
681 |
gccttagtggcgggaattgcaattatattctgtg |
714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 25)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 9537332 - 9537169
Alignment:
| Q |
1 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggttgtgtgtttgatgatgcattaatatttgagtgtaattgccttag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| || |||||||| |||||||| ||||| |
|
|
| T |
9537332 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggttgcgtgtttgaccatgcgtt-atatttgattgtaattgtcttag |
9537234 |
T |
 |
| Q |
101 |
tggc-ggttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
9537233 |
cggcgggttataattatattctgtgtggtgccttagtggcgggttttagtctacattttcatgat |
9537169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 8421839 - 8421990
Alignment:
| Q |
11 |
aagagaaagatgaaaatgtgagtttgtgaaatgatggacttttgg-ttgtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggc-ggtt |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||| |||| |
|
|
| T |
8421839 |
aagagaaagatgaaaatgtgagtttgtgaaatgactgacttttggtttgtgtgcttgatgatgcattaata----cctgtaattaccttagtggcaggtt |
8421934 |
T |
 |
| Q |
109 |
ataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
8421935 |
gtgattatattctgtgtggtgccttagcggcgggttttagtctgcattttcatgat |
8421990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 8421968 - 8422052
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8421968 |
gttttagtctgcattttcatgatcatgcatggcatatgcatctatgtggtgccttagtggcggaaattgcaattatattctgtgt |
8422052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 43407167 - 43407087
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
43407167 |
gttttagtttgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattct |
43407087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 37666977 - 37666898
Alignment:
| Q |
169 |
ttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37666977 |
ttttagtctgcattttcatgatcatgcatgtcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattct |
37666898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 338349 - 338445
Alignment:
| Q |
11 |
aagagaaagatgaaaatgtgagtttgtgaaatgatggacttttgg-ttgtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggcgg |
106 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
338349 |
aagaaaaagatgagaatgtgagtttgtgaaatgattgacttttggtttgtgtacttgatgatgcattaatacttgactgtaattgccttagtggcgg |
338445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 338514 - 338594
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
338514 |
gttttagtttgcattttcatgatcatgcatgtcatatgcatctgtgtggtgccttagtggcgggatttgcaattatattct |
338594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 9537191 - 9537120
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaa |
239 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
9537191 |
gttttagtctacattttcatgatcatgcatggcatatgcatttgtgtggtgccttagtggcgggaattgcaa |
9537120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 33007450 - 33007367
Alignment:
| Q |
169 |
ttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||| ||| ||||||||| ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| ||||| |
|
|
| T |
33007450 |
ttttagtctacattttcataatcatgcatagcatatgcatctgtgtggtgctttagtggcgggaattgcaattatattatgtgt |
33007367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 338477 - 338536
Alignment:
| Q |
105 |
ggttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
338477 |
ggttataattatattttgtgtggtgccttagtggcgggttttagtttgcattttcatgat |
338536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 43407204 - 43407145
Alignment:
| Q |
105 |
ggttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
43407204 |
ggttataattatattttgtgtggtgccttagtggcgggttttagtttgcattttcatgat |
43407145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 16075157 - 16075211
Alignment:
| Q |
177 |
tgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcggg |
231 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| | |||||||||||| |
|
|
| T |
16075157 |
tgcattttcatgatcatgcatggcaaatgcatctgtgtggtgtcttagtggcggg |
16075211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 25921905 - 25921977
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||||| |||||||||| ||| ||| |||||||||| ||||| |
|
|
| T |
25921905 |
cattttcatgatcatacatgacatatgcatctgtgtggtgccttagtggtggg-attacaattatattttgtgt |
25921977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 6836394 - 6836445
Alignment:
| Q |
180 |
attttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcggg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
6836394 |
attttcctgatcatgcatggcatatgcatctgtgtggtgcctgtgtggcggg |
6836445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 18472677 - 18472635
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcgcct |
221 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
18472677 |
cattttcatgatcatgcatagcatatgcatctgtgtggtgcct |
18472635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 35761803 - 35761741
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgca-tggcatatgcatctgtgtggcgccttagtggcggg |
231 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||||||||||||||| |||| |||||||| |
|
|
| T |
35761803 |
tttaatcttcattttcatgatcatgcattagcatatgcatctgtgtggtgcctgtgtggcggg |
35761741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 6836314 - 6836346
Alignment:
| Q |
112 |
attatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
6836314 |
attatattctgtgtggtgccttagtggcgggtt |
6836346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 9537098 - 9537068
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
9537098 |
gccttagtggcgggaattgcaattatattct |
9537068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 28561825 - 28561885
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgcatggcatatgca--tctgtgtggcgccttagtggc |
228 |
Q |
| |
|
|||||| | |||||||||||||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
28561825 |
tttaattttcattttcatgatcatgcatgatatatgcatttctgtgtggtgccttagtggc |
28561885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 37666993 - 37666956
Alignment:
| Q |
127 |
gtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
37666993 |
gtgccttagtggcggattttagtctgcattttcatgat |
37666956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 338603 - 338631
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
338603 |
gccttagtggcgggaattgcaattatatt |
338631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 33007360 - 33007328
Alignment:
| Q |
220 |
cttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
33007360 |
cttagtggcgggaattgcaattatattatgtgt |
33007328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 33007488 - 33007432
Alignment:
| Q |
105 |
ggttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcat |
161 |
Q |
| |
|
||||||||||||||||| ||||||| ||| |||| || ||||| ||| ||||||||| |
|
|
| T |
33007488 |
ggttataattatattctatgtggtgtcttcgtggtggattttagtctacattttcat |
33007432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 37666889 - 37666861
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
37666889 |
gccttagtggcgggaattgcaattatatt |
37666861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 43407078 - 43407050
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
43407078 |
gccttagtggcgggaattgcaattatatt |
43407050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 49170236 - 49170081
Alignment:
| Q |
11 |
aagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggtt-gtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggcgg-tt |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||| || |
|
|
| T |
49170236 |
aagagaaagatgaaaatgtgagtttgtgaaatgattgacttttggtttgtgtgcttgatgatgcattaatacttgaatgtaattgccttagtggcgggtt |
49170137 |
T |
 |
| Q |
109 |
ataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||| |||||||||||||||| |
|
|
| T |
49170136 |
gtaattatattctgtgtggtgtcttagtggcggattttagtctgcattttcatgat |
49170081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22077899 - 22078044
Alignment:
| Q |
1 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggttgtgtgtttgatgatgcattaatatttga--gtgtaattgcctt |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || | ||||||| |
|
|
| T |
22077899 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggttgtgtgtttgatgatgcgttaatatttgactatgcatttgcctt |
22077998 |
T |
 |
| Q |
99 |
agtggc-ggttataattatat-tctgtgtggtgccttagtggcggg |
142 |
Q |
| |
|
|||||| ||||| | ||||| ||| |||||||||||||||||||| |
|
|
| T |
22077999 |
agtggcgggttaataatatatctctttgtggtgccttagtggcggg |
22078044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 12911673 - 12911409
Alignment:
| Q |
1 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttgg-ttgtgtgtttgatgatgcattaatatttgagtgtaattgcctta |
99 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12911673 |
aattaaagaaaaaagaactatgaaaatgtgagtttgtgaaatgattgacttttggtttgtgtacttgatgatgcattaatatttgactgtaattgcctta |
12911574 |
T |
 |
| Q |
100 |
gtggc-ggttataattata-ttctgtgtggtgccttagtggcgggttttaa------tctgcat-tttcatgatt---gagttttaatctgcattttcat |
187 |
Q |
| |
|
||| | ||||| || ||| |||| ||||||||| ||||||||||| ||| |||| | | | | | | | |||||| ||||||||||||| |
|
|
| T |
12911573 |
gtgacaggttaatatcatatttcttagtggtgcctaagtggcgggttataattatattctgtgtggtaccttagtggcgggttttagtctgcattttcat |
12911474 |
T |
 |
| Q |
188 |
gatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
12911473 |
aatcatgtatggcatatgcatctgtgtggtgccttagtggtaggaattgcaattatattctgtgt |
12911409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 40106217 - 40106300
Alignment:
| Q |
169 |
ttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
40106217 |
ttttagtctgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaatcgcaattatattctgtgt |
40106300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 10288591 - 10288511
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10288591 |
gttttagtttgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattct |
10288511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 12196494 - 12196412
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
12196494 |
tttagtctgcattttcatgatcatacatggcatattcatctgtgtggtgccttagtggcgggaattgcaattatattctgtgt |
12196412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 12196600 - 12196474
Alignment:
| Q |
40 |
aatgatggacttttggttgtgtgtttgatgatgcattaatatttgagtgtaattgccttagtgg-cggttataattatat-tctgtgtggtgccttagtg |
137 |
Q |
| |
|
|||||| |||| |||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||| |
|
|
| T |
12196600 |
aatgattgactgttggttgtgtgtctgatgatgcgttaatatttggctgtaattgccttagtggtgggttaatattatatatctgtgtggtgccttagtg |
12196501 |
T |
 |
| Q |
138 |
gcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
|||| |||| |||||||||||||||| |
|
|
| T |
12196500 |
gcggactttagtctgcattttcatgat |
12196474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 15873775 - 15873695
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||| || |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
15873775 |
gttttagtgtgcattttcatgttcgtgcatggcatatgcatctgtgtggtgccttagtggcgggatttgcaattatattct |
15873695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 11036145 - 11036062
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgcatg-gcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||| ||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
11036145 |
tttagtcttcattttcatgatcatgcattagcatatgcatctctgtggtgccttagtggcgggaattgcaattatattctgtgt |
11036062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 49170102 - 49170023
Alignment:
| Q |
169 |
ttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtgg-cgccttagtgg-cgggaattgcaattatatt |
246 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
49170102 |
ttttagtctgcattttcatgatcatgcatggcatatgcatctgtgtggatgccttagtggccgggaattgcaattatatt |
49170023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 10288628 - 10288569
Alignment:
| Q |
105 |
ggttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
10288628 |
ggttataattatattttgtgtggtgccttagtggcgggttttagtttgcattttcatgat |
10288569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 40106193 - 40106238
Alignment:
| Q |
119 |
tctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
40106193 |
tctgtgtggtgccttagtggcggattttagtctgcattttcatgat |
40106238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 40106305 - 40106339
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
40106305 |
gccttagtggcaggaattgcaattatattctgtgt |
40106339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 48653586 - 48653549
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtgg |
216 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
48653586 |
cattttcatgatcatgcataacatatgcatctgtgtgg |
48653549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 10288502 - 10288474
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
10288502 |
gccttagtggcgggaattgcaattatatt |
10288474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 11036057 - 11036025
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatattctgt |
250 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
11036057 |
gccttagtggcgggaattgcaattatactctgt |
11036025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 15873686 - 15873658
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15873686 |
gccttagtggcgggaattgcaattatatt |
15873658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 22078083 - 22078135
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgca-tggcatatgcatctgtgtggcgcct |
221 |
Q |
| |
|
|||| ||| |||||||||||||||||| | |||||||||||||||||| |||| |
|
|
| T |
22078083 |
tttagtcttcattttcatgatcatgcattagcatatgcatctgtgtggtgcct |
22078135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 40691148 - 40691303
Alignment:
| Q |
11 |
aagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggtt-gtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggcgg-tt |
108 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||| || ||||||||||||||||| || |
|
|
| T |
40691148 |
aagaaaaagatgaaaatgtgagtttgtgaaatgattgacttttggtttgtgtgcttgatgatgcattaatacttgactggaattgccttagtggcgggtt |
40691247 |
T |
 |
| Q |
109 |
ataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
40691248 |
gtgattatattatgtgtggtgccttagtgacgggttttagtctgcattttcatgat |
40691303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 40691281 - 40691365
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| |
|
|
| T |
40691281 |
gttttagtctgcattttcatgatcatgcaaggcatatgcatctgtgtggtgccttattggcggaaattgcaattatattctgtgt |
40691365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 30910206 - 30910288
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
30910206 |
tttagtctgcatttccatgatcatgcatggcatatgcatctgtgtggtctcttagtagcgggaattgcaattatattctgtgt |
30910288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 537226 - 537306
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||| || |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
537226 |
gttttagtgtgcattttcatgttcgtgcatggcatatgcatctgtgtggtgccttagtggcgggatttgcaattatattct |
537306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 38001343 - 38001411
Alignment:
| Q |
97 |
ttagtggcg-gttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
38001343 |
ttagtggcgagttataattatattctgtgtggtgtcttagtggcgggttttaatctgcattttcatgat |
38001411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 30910033 - 30910129
Alignment:
| Q |
9 |
aaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttgg-ttgtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggc |
104 |
Q |
| |
|
|||| |||| |||||||||||| |||||||||||||| || |||||| |||||| ||||| ||||||||||| |||| |||||||||||||||||| |
|
|
| T |
30910033 |
aaaaaagaacgatgaaaatgtgtgtttgtgaaatgattgaattttggtttgtgtacttgatcatgcattaatacttgattgtaattgccttagtggc |
30910129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 38001389 - 38001463
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatat |
245 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||||| | | |||||||||||||||||||||||| |
|
|
| T |
38001389 |
gttttaatctgcattttcatgatc--gcatgacatatgcatctgtgtggtgtc-tagtggcgggaattgcaattatat |
38001463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 6309116 - 6309168
Alignment:
| Q |
93 |
tgccttagtggcgg-ttataattatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
6309116 |
tgccttagtggcgggttactattatattctgtgtggtgccttagtggcgggtt |
6309168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 6309186 - 6309222
Alignment:
| Q |
180 |
attttcatgatcatgcatggcatatgcatctgtgtgg |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6309186 |
attttcatgatcatgcatggcatatgcatctgtgtgg |
6309222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 25101669 - 25101617
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcggg |
231 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||| |||||||| |
|
|
| T |
25101669 |
cattttcatgatcatgcatggtatatgcatctgtgtggtgcctgtgtggcggg |
25101617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 25160762 - 25160710
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcggg |
231 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||| |||||||| |
|
|
| T |
25160762 |
cattttcatgatcatgcatggtatatgcatctgtgtggtgcctgtgtggcggg |
25160710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 30910155 - 30910226
Alignment:
| Q |
93 |
tgccttagtggcgg-ttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||| |||||||| ||||||||||||| ||||||||||||||||||| || |||| ||||||||| |||||| |
|
|
| T |
30910155 |
tgcctaagtggcgggttataattatattatgtgtggtgccttagtggc-ggatttagtctgcatttccatgat |
30910226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 42861832 - 42861871
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcg |
218 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
42861832 |
cattttcatgatcatgcatagcatatgcatctgtgtggcg |
42861871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 6309083 - 6309132
Alignment:
| Q |
96 |
cttagtggcgg-ttataattatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
6309083 |
cttagtggcgggttactattatattctgtgtggtgccttagtggcgggtt |
6309132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 252
Target Start/End: Original strand, 38001478 - 38001509
Alignment:
| Q |
221 |
ttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
38001478 |
ttagtggcgggaattgcaattatattctgtgt |
38001509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 27026850 - 27026899
Alignment:
| Q |
93 |
tgccttagtggcgg--ttataattatattctgtgtgg-tgccttagtggc |
139 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
27026850 |
tgccttagtggcgggattataattatattctgtgtggatgccttagtggc |
27026899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 537315 - 537343
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
537315 |
gccttagtggcgggaattgcaattatatt |
537343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 6309064 - 6309096
Alignment:
| Q |
112 |
attatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
6309064 |
attatattctgtgtggtgtcttagtggcgggtt |
6309096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 55162427 - 55162582
Alignment:
| Q |
11 |
aagagaaagatgaaaatgtgagtttgtgaaatgatggacttttgg-ttgtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggc-ggtt |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| || | ||||||||| |||||||| |||| |
|
|
| T |
55162427 |
aagagaaagatgaaaatgtgagtttgtgaaatgattgacttttggtttgtgtgcttgatgatgcattaatacttaactgtaattgcattagtggcgggtt |
55162526 |
T |
 |
| Q |
109 |
ataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
| |||||||||||||||||||||| ||| ||| ||||| |||||||||||||||| |
|
|
| T |
55162527 |
gtgattatattctgtgtggtgccttggtgacggattttagtctgcattttcatgat |
55162582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28969164 - 28969072
Alignment:
| Q |
1 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggttgtgtgtttgatgatgcattaatatttgagtgtaatt |
93 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
28969164 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgattgacttttggttgtgtgtttcatgatgagttaatatttgagtgtaatt |
28969072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 55162561 - 55162644
Alignment:
| Q |
169 |
ttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
55162561 |
ttttagtctgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattctgtgt |
55162644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 28969044 - 28968955
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcat-----atgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
28969044 |
gttttaatctgcattttcatgatcatgcatggcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattttgtgt |
28968955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 40459366 - 40459437
Alignment:
| Q |
177 |
tgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
40459366 |
tgcattttcatgatcatgcatgtcatatgcatctgtgtggtgccttagtggcgggatttgcaattatattct |
40459437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 13652950 - 13653025
Alignment:
| Q |
177 |
tgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||||| ||||| |
|
|
| T |
13652950 |
tgcattttcatgatcatgcatggtatatgcatttgtgtggtgccttagtggcgagaattgcaattatattttgtgt |
13653025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 13661075 - 13661150
Alignment:
| Q |
177 |
tgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||||| ||||| |
|
|
| T |
13661075 |
tgcattttcatgatcatgcatggtatatgcatttgtgtggtgccttagtggcgagaattgcaattatattttgtgt |
13661150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 40459210 - 40459288
Alignment:
| Q |
29 |
tgagtttgtgaaatgatggacttttggtt-gtgtgtttgatgatgcattaatatttgagtgtaattgccttagtggcgg |
106 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
40459210 |
tgagtttgtgaaatgattgacttttggtttgtgtgcttgatgatgcattaatacttgaatgtaattgccttagtggcgg |
40459288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 28969076 - 28969022
Alignment:
| Q |
110 |
taattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28969076 |
taattatattctgtgtggtgccttagtggtaggttttaatctgcattttcatgat |
28969022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 2761849 - 2761801
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtgg |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
2761849 |
cattttcatgatcatgcatggcatatgcatttgtgtggtgccttagtgg |
2761801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 40459307 - 40459379
Alignment:
| Q |
93 |
tgccttagtggcgg-ttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
40459307 |
tgcctaagtggcgggttataattatattctatgttgtgccttagtggcgggttttaggttgcattttcatgat |
40459379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 55162638 - 55162682
Alignment:
| Q |
208 |
tctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
55162638 |
tctgtgtggtgccttagtggcgggaattgcaattatattctgtgt |
55162682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 69782 - 69833
Alignment:
| Q |
180 |
attttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcggg |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
69782 |
attttcatgatcatgcatggcatatgcatctgtgtggtgcctgtgtggcggg |
69833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 69712 - 69764
Alignment:
| Q |
93 |
tgccttagtggcgg-ttataattatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
69712 |
tgccttagtggcgggttacgattatattctgtgtggtgccttagtggcgggtt |
69764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 69696 - 69728
Alignment:
| Q |
112 |
attatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
69696 |
attatattctgtgtggtgccttagtggcgggtt |
69728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 55162630 - 55162661
Alignment:
| Q |
111 |
aattatattctgtgtggtgccttagtggcggg |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
55162630 |
aattatattctgtgtggtgccttagtggcggg |
55162661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 13653032 - 13653064
Alignment:
| Q |
220 |
cttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
13653032 |
cttagtggcggaaattgcaattatattctgtgt |
13653064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 13661157 - 13661189
Alignment:
| Q |
220 |
cttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
13661157 |
cttagtggcggaaattgcaattatattctgtgt |
13661189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 40459446 - 40459474
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
40459446 |
gccttagtggcgggaattgcaattatatt |
40459474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 55162687 - 55162715
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
55162687 |
gccttagtggcgggaattgcaattatatt |
55162715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 8e-36; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 41958222 - 41958138
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
41958222 |
gttttagtctgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattctgtgt |
41958138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 44436310 - 44436463
Alignment:
| Q |
1 |
aattaaagaaaagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggttgtgtgtttgatgatgcattaatatt-----tgagtgtaattgc |
95 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||| |||||||||||| |||||||| ||||||||||||||||| |||||||| | |||| || |
|
|
| T |
44436310 |
aattaaagaaaaaagaaagatgaaaacgtgagattgtgaaatgattgacttttgcctgtgtgtttgatgatgcgttaatattatatatccgtgt-ggtgt |
44436408 |
T |
 |
| Q |
96 |
cttagtggc-ggttataattatattctgtgtggtgccttagtggcgggttttaat |
149 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
44436409 |
cttagttgcgggttataattatattctgtgtggtgccttagttgcgggttataat |
44436463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 44436478 - 44436550
Alignment:
| Q |
93 |
tgccttagtggcgg-ttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |
|
|
| T |
44436478 |
tgccttagttgcgggttataattatattctgtgtggtgccttagtggtgggttttagtctctattttcatgat |
44436550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 22635772 - 22635730
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcgcct |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22635772 |
cattttcatgatcatgcatggcatatgcatctgtgtggtgcct |
22635730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 44436442 - 44436499
Alignment:
| Q |
93 |
tgccttagtggcgg-ttataattatattctgtgtggtgccttagtggcgggttttaat |
149 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
44436442 |
tgccttagttgcgggttataattatattctgtgtggtgccttagttgcgggttataat |
44436499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 44436540 - 44436592
Alignment:
| Q |
180 |
attttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcggga |
232 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||| ||||||||| |
|
|
| T |
44436540 |
attttcatgatcatgcttggcatatgcatctgtgtggtgcctgtgtggcggga |
44436592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 22816064 - 22816031
Alignment:
| Q |
180 |
attttcatgatcatgcatggcatatgcatctgtg |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
22816064 |
attttcatgatcatgcatggcatatgcatctgtg |
22816031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 22635841 - 22635789
Alignment:
| Q |
93 |
tgccttagtggc-ggttataattatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
22635841 |
tgccttagtggcaggttgcaattatattctgtgtggtgcctcagtggcgggtt |
22635789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 22816136 - 22816082
Alignment:
| Q |
93 |
tgccttagtggcg---gttataattatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
22816136 |
tgccttagtggcgcgggttacaattatattatgtgtggtgccttagtggcgggtt |
22816082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 3189179 - 3189142
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtgg |
216 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
3189179 |
cattttcatgatcatgcatgacatatgcatttgtgtgg |
3189142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 40841276 - 40841215
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgcatg-gcatatgcatctgtgtggcgccttagtggcgg |
230 |
Q |
| |
|
|||| ||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||| |
|
|
| T |
40841276 |
tttagtcttcattttcatgatcatgcattagcatatgcatctgtgtggtgcctgtgtggcgg |
40841215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 22816197 - 22816161
Alignment:
| Q |
108 |
tataattatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
22816197 |
tataattattttctgtgtggtgcctaagtggcgggtt |
22816161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 23260414 - 23260330
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23260414 |
gttttagtctgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattttgtgt |
23260330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 10751360 - 10751280
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
10751360 |
gttttagtctgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattacaattatattct |
10751280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 34636593 - 34636673
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||| || |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
34636593 |
gttttagtgtgcattttcatgttcgtgcatggcatatgcatctgtgtggtgccttagtggcgggatttgcaattatattct |
34636673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 32450016 - 32449954
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgca-tggcatatgcatctgtgtggcgccttagtggcggg |
231 |
Q |
| |
|
|||||||| |||||||||||||||||| | |||||||||||||||||| |||| |||||||| |
|
|
| T |
32450016 |
tttaatcttcattttcatgatcatgcattagcatatgcatctgtgtggtgcctgtgtggcggg |
32449954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 10751375 - 10751338
Alignment:
| Q |
127 |
gtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10751375 |
gtgccttagtggcgggttttagtctgcattttcatgat |
10751338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 13773172 - 13773121
Alignment:
| Q |
179 |
cattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgg |
230 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||| |||| ||||||| |
|
|
| T |
13773172 |
cattttcatgatcatgcatagcatatacatctgtgtggtgcctgtgtggcgg |
13773121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 23260325 - 23260297
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
23260325 |
gccttagtggcgggaattgcaattatatt |
23260297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 34636682 - 34636710
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
34636682 |
gccttagtggcgggaattgcaattatatt |
34636710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 5004520 - 5004440
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5004520 |
gttttagtctgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattct |
5004440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 7336494 - 7336414
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7336494 |
gttttagtttgcattttcatgatcatgcatggcatatgcatctgtgtggtgccttagtggcgggaattgcaattatattct |
7336414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 16975726 - 16975810
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
16975726 |
gttttagtctgcattttcatgatcatccatggcatatgcatctgtgtggtgccatagtggcgggaattgcaattatattctgtgt |
16975810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 43277834 - 43277762
Alignment:
| Q |
180 |
attttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattctgtgt |
252 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
43277834 |
attttcatgatcatacatgacatatgcatctgtgtggtgccttagtggcgggaattgcaattatattctgtgt |
43277762 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 46404401 - 46404321
Alignment:
| Q |
168 |
gttttaatctgcattttcatgatcatgcatggcatatgcatctgtgtggcgccttagtggcgggaattgcaattatattct |
248 |
Q |
| |
|
|||||| | |||||||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
46404401 |
gttttagtgtgcattttcatgtttgtgcatggcatatgcatctgtgtggtgccttagtggcgggatttgcaattatattct |
46404321 |
T |
 |
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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 7336531 - 7336472
Alignment:
| Q |
105 |
ggttataattatattctgtgtggtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
7336531 |
ggttataattatattttgtgtggtgccttagtggcgggttttagtttgcattttcatgat |
7336472 |
T |
 |
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Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 5004535 - 5004498
Alignment:
| Q |
127 |
gtgccttagtggcgggttttaatctgcattttcatgat |
164 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5004535 |
gtgccttagtggcgggttttagtctgcattttcatgat |
5004498 |
T |
 |
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Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 17542494 - 17542462
Alignment:
| Q |
112 |
attatattctgtgtggtgccttagtggcgggtt |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
17542494 |
attatattctgtgtggtgccttagtggcgggtt |
17542462 |
T |
 |
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Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 5004431 - 5004403
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5004431 |
gccttagtggcgggaattgcaattatatt |
5004403 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 7336405 - 7336377
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
7336405 |
gccttagtggcgggaattgcaattatatt |
7336377 |
T |
 |
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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 9104588 - 9104640
Alignment:
| Q |
170 |
tttaatctgcattttcatgatcatgca-tggcatatgcatctgtgtggcgcct |
221 |
Q |
| |
|
|||| ||| |||||||||||||||||| | |||||||||||||||||| |||| |
|
|
| T |
9104588 |
tttagtcttcattttcatgatcatgcattagcatatgcatctgtgtggtgcct |
9104640 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 16975815 - 16975843
Alignment:
| Q |
218 |
gccttagtggcgggaattgcaattatatt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
16975815 |
gccttagtggcgggaattgcaattatatt |
16975843 |
T |
 |
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Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 33248 - 33202
Alignment:
| Q |
11 |
aagagaaagatgaaaatgtgagtttgtgaaatgatggacttttggtt |
57 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33248 |
aagagaaagatgaaaatgtgagtttgtgaaatgattgacttttggtt |
33202 |
T |
 |
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Target: scaffold0041; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 33078 - 33038
Alignment:
| Q |
181 |
ttttcatgatcatgcatggcatatgcatctgtgtggcgcct |
221 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||| |||| |
|
|
| T |
33078 |
ttttcattatcatgcatgacatatgcatctgtgtggtgcct |
33038 |
T |
 |
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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 242894 - 242844
Alignment:
| Q |
93 |
tgccttagtggc-ggttataattatattctgtgtggtgccttagtggcggg |
142 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
242894 |
tgccttagtggcaggttactattatattctgtgtggtgccttcgtggcggg |
242844 |
T |
 |
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