View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4677_high_2 (Length: 297)
Name: NF4677_high_2
Description: NF4677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4677_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 64 - 285
Target Start/End: Original strand, 3013571 - 3013792
Alignment:
| Q |
64 |
tcatatttgttacgttattagctgatgtaggtagataacttgtcaaataagtcactctctggggtgagagatttgtaaatctattacagtcctatccgtc |
163 |
Q |
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| T |
3013571 |
tcatatttgttacgttattagctgatgtaggtagataacttgtcaaataagtcactctcttgggtgagagatttgtaaatctattacagtcctatccgtc |
3013670 |
T |
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| Q |
164 |
ccagcccggttcacacaagaagaaataaataagttaaacaatgggttttccttaaaaaagagttaaacggtggtttgaaaaccctaatctgaaaaatcgt |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
3013671 |
ccagcccggttcacacaagaagaaataaataagttaaacagtcggttttccttaaaaaagagttaaacggtggtttgaaaaccctaatctgaaaaatagt |
3013770 |
T |
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| Q |
264 |
gaagcatcaaagaagatgaata |
285 |
Q |
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|||||||||||||||||||||| |
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| T |
3013771 |
gaagcatcaaagaagatgaata |
3013792 |
T |
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