View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4679_high_22 (Length: 256)
Name: NF4679_high_22
Description: NF4679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4679_high_22 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 3575647 - 3575886
Alignment:
| Q |
16 |
ataatacttataataagcacatatttaatattttctttctttttctgaaaaacaagaatatatatattatcatcttgtctaatgtaataagcacatattt |
115 |
Q |
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| T |
3575647 |
ataatacttataataagcacatatttaatattttctttctttttctgaaaaacaagaatatat-tatcatcttgtcgtctaatgtaataagcacatattt |
3575745 |
T |
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| Q |
116 |
tataggaagaaggatgggttgtgtgtaaagtgttcaagaaacgaatagctacaacaatgaggaaaatggacgattcaccatgttggtatgatgatcaagt |
215 |
Q |
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| T |
3575746 |
tataggaagaaggatgggttgtgtgtaaagtgttcaagaaacgaatagctacaacaatgaggaaaatggacgattcaccatgttggtatgatgatcaagt |
3575845 |
T |
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| Q |
216 |
atcattcatgcaatcagagcttgaatccccaagcagaattt |
256 |
Q |
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| T |
3575846 |
atcattcatgcaatcagagcttgaatccccaagcagaattt |
3575886 |
T |
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