View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4679_low_19 (Length: 332)
Name: NF4679_low_19
Description: NF4679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4679_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 279
Target Start/End: Complemental strand, 12168064 - 12167803
Alignment:
| Q |
18 |
aaaaaccttattgcatgtcttttcttattaaattctcttccaaaattcctttcatttcatatatatatgctgcttcaaaaccaaaacatgatgcataata |
117 |
Q |
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| T |
12168064 |
aaaaaccttattgcatgtcttttcttattaaattctcttccaaaattcccttcatttcatatatatatgctgcttcaaaaccaaaacatgatgcataata |
12167965 |
T |
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| Q |
118 |
acaagaaactcttgtttttcaactaagcatgtgtagtatctttgtttcttcaacaagtatggacaattacctaggtgatttaactgacataatcagaggt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12167964 |
acaagaaactcttgtttttcaactaagcatgtgtagtatctttgtttcttcaacaagtatggacaattacctaggtgatttaactgacataatcagaggt |
12167865 |
T |
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| Q |
218 |
ggtactgctggagcttatagtagtacaggaacttcatcatcatctgctgaacctgcagtttc |
279 |
Q |
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| T |
12167864 |
ggtactgctggagcatatagtagtacaggaacttcatcatcatctgctgaacctgcagtttc |
12167803 |
T |
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