View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4679_low_28 (Length: 228)
Name: NF4679_low_28
Description: NF4679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4679_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 6 - 214
Target Start/End: Original strand, 38759235 - 38759443
Alignment:
| Q |
6 |
aaatattttctgaaaatattacactttcaagttcggtacaagtttataaaaatattccggaatattattcatttcccaagaattaaatttacacacaagt |
105 |
Q |
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| T |
38759235 |
aaatattttctgaaaatattacactttcaagttcggtacaagtttataaaaatattccggaatattattcatttcccaagaattaaatttacacacaagt |
38759334 |
T |
|
| Q |
106 |
gagaagatactaaaaacaacttctcatttgatttggaaacaatttatatatttttatcttattattaaaaaagctgtaataaacatgtgaaactcattta |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38759335 |
gagaagatactaaaaacaacttctcatttgatttggaaacaatttatatatttttatcttattattaaaaaagctgtaataaacatgtgaaactcattta |
38759434 |
T |
|
| Q |
206 |
ttgaaagtg |
214 |
Q |
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||||||||| |
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| T |
38759435 |
ttgaaagtg |
38759443 |
T |
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