View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4679_low_30 (Length: 215)

Name: NF4679_low_30
Description: NF4679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4679_low_30
NF4679_low_30
[»] chr4 (30 HSPs)
chr4 (17-118)||(53755106-53755207)
chr4 (117-205)||(22199443-22199531)
chr4 (117-205)||(53123215-53123303)
chr4 (118-205)||(10442581-10442668)
chr4 (121-205)||(9089054-9089138)
chr4 (117-205)||(46442028-46442116)
chr4 (118-205)||(21802114-21802201)
chr4 (114-205)||(31078609-31078700)
chr4 (119-201)||(33530479-33530561)
chr4 (119-205)||(36073533-36073619)
chr4 (117-205)||(47290250-47290338)
chr4 (118-205)||(44893007-44893094)
chr4 (119-205)||(44893610-44893696)
chr4 (117-205)||(2625021-2625109)
chr4 (117-205)||(36073135-36073223)
chr4 (117-205)||(49387680-49387768)
chr4 (118-205)||(7744906-7744993)
chr4 (121-205)||(17655614-17655699)
chr4 (117-205)||(4751631-4751719)
chr4 (121-205)||(24128423-24128507)
chr4 (117-194)||(11314044-11314122)
chr4 (129-205)||(23964269-23964345)
chr4 (121-205)||(24392858-24392942)
chr4 (119-205)||(42671852-42671939)
chr4 (118-205)||(50156373-50156459)
chr4 (117-197)||(37219823-37219904)
chr4 (118-205)||(37934735-37934823)
chr4 (119-201)||(36073256-36073339)
chr4 (119-168)||(25063369-25063419)
chr4 (149-201)||(30563397-30563449)
[»] chr7 (19 HSPs)
chr7 (117-205)||(15577640-15577728)
chr7 (118-205)||(45637895-45637982)
chr7 (117-205)||(3962162-3962250)
chr7 (118-205)||(35445581-35445668)
chr7 (118-201)||(42611999-42612082)
chr7 (119-205)||(24395155-24395241)
chr7 (114-203)||(25167646-25167735)
chr7 (117-205)||(15329458-15329546)
chr7 (119-205)||(34483022-34483108)
chr7 (119-205)||(35876428-35876514)
chr7 (121-205)||(4974532-4974616)
chr7 (118-205)||(48880721-48880808)
chr7 (119-205)||(30848753-30848839)
chr7 (118-205)||(15238568-15238655)
chr7 (120-205)||(37476876-37476961)
chr7 (128-205)||(29737328-29737406)
chr7 (117-205)||(18037161-18037249)
chr7 (121-205)||(20009895-20009980)
chr7 (118-205)||(42696267-42696355)
[»] chr3 (27 HSPs)
chr3 (117-205)||(6042061-6042149)
chr3 (119-205)||(19650695-19650781)
chr3 (117-205)||(3456248-3456336)
chr3 (119-205)||(3089603-3089689)
chr3 (119-205)||(3574321-3574407)
chr3 (117-205)||(3137207-3137295)
chr3 (117-205)||(22426138-22426226)
chr3 (117-205)||(33113978-33114066)
chr3 (117-205)||(34482681-34482769)
chr3 (117-205)||(37216846-37216934)
chr3 (117-205)||(48161090-48161178)
chr3 (119-205)||(30385584-30385670)
chr3 (120-205)||(8320378-8320463)
chr3 (110-205)||(8361825-8361920)
chr3 (119-205)||(47738295-47738382)
chr3 (119-205)||(9796824-9796910)
chr3 (117-205)||(36864825-36864914)
chr3 (117-201)||(40328019-40328104)
chr3 (121-201)||(33145900-33145980)
chr3 (119-205)||(2754903-2754989)
chr3 (119-205)||(37522237-37522323)
chr3 (118-205)||(41224418-41224505)
chr3 (121-205)||(42921309-42921394)
chr3 (119-205)||(26612930-26613017)
chr3 (131-205)||(33839719-33839794)
chr3 (119-201)||(24343737-24343820)
chr3 (120-201)||(46919082-46919164)
[»] scaffold0096 (1 HSPs)
scaffold0096 (119-205)||(41194-41280)
[»] chr1 (22 HSPs)
chr1 (119-205)||(3559801-3559887)
chr1 (117-205)||(20304923-20305011)
chr1 (117-205)||(44094881-44094969)
chr1 (119-205)||(25463860-25463946)
chr1 (120-205)||(40215172-40215257)
chr1 (117-205)||(51737689-51737777)
chr1 (119-205)||(37821629-37821715)
chr1 (117-205)||(18404632-18404720)
chr1 (117-205)||(33786424-33786512)
chr1 (117-205)||(36966501-36966589)
chr1 (117-205)||(41876235-41876323)
chr1 (118-205)||(19015588-19015675)
chr1 (119-205)||(25973591-25973677)
chr1 (119-205)||(32000061-32000147)
chr1 (119-205)||(6883671-6883757)
chr1 (119-195)||(19722894-19722970)
chr1 (121-205)||(40273892-40273976)
chr1 (119-198)||(9910086-9910165)
chr1 (122-184)||(33786634-33786696)
chr1 (117-201)||(10167587-10167672)
chr1 (123-195)||(40273706-40273779)
chr1 (120-168)||(52064373-52064422)
[»] scaffold0228 (2 HSPs)
scaffold0228 (117-205)||(16168-16256)
scaffold0228 (117-205)||(26120-26208)
[»] chr8 (31 HSPs)
chr8 (117-205)||(1645757-1645845)
chr8 (121-205)||(24211169-24211253)
chr8 (118-205)||(15187744-15187831)
chr8 (117-205)||(31347569-31347657)
chr8 (118-205)||(1503637-1503724)
chr8 (118-205)||(26041907-26041994)
chr8 (118-205)||(37985850-37985937)
chr8 (118-205)||(40779923-40780010)
chr8 (119-205)||(3596836-3596922)
chr8 (119-205)||(6108028-6108114)
chr8 (119-205)||(10044532-10044618)
chr8 (119-205)||(17841645-17841731)
chr8 (119-205)||(30055700-30055786)
chr8 (120-205)||(14129043-14129128)
chr8 (121-205)||(20091598-20091682)
chr8 (121-205)||(34665565-34665649)
chr8 (118-205)||(32064930-32065017)
chr8 (119-205)||(25581034-25581120)
chr8 (119-205)||(42754837-42754923)
chr8 (121-205)||(38017116-38017201)
chr8 (130-199)||(39772608-39772677)
chr8 (117-205)||(7022163-7022251)
chr8 (121-201)||(37132477-37132558)
chr8 (117-205)||(7017651-7017739)
chr8 (122-195)||(3890412-3890486)
chr8 (149-205)||(41819593-41819649)
chr8 (118-199)||(30834849-30834931)
chr8 (131-205)||(32394041-32394114)
chr8 (131-205)||(35353225-35353299)
chr8 (160-205)||(8454017-8454062)
chr8 (164-205)||(27835293-27835334)
[»] chr2 (17 HSPs)
chr2 (117-205)||(13355032-13355120)
chr2 (123-205)||(3989260-3989342)
chr2 (119-205)||(7475303-7475389)
chr2 (119-205)||(9293370-9293456)
chr2 (119-205)||(10662072-10662158)
chr2 (119-205)||(33380391-33380477)
chr2 (119-205)||(35160943-35161029)
chr2 (118-205)||(43331096-43331183)
chr2 (119-205)||(23267857-23267943)
chr2 (117-195)||(22592906-22592985)
chr2 (122-205)||(31174633-31174716)
chr2 (121-205)||(21393483-21393566)
chr2 (149-205)||(21936266-21936322)
chr2 (119-201)||(9723594-9723677)
chr2 (149-205)||(16767287-16767343)
chr2 (117-154)||(34320961-34320998)
chr2 (160-205)||(34320993-34321038)
[»] chr5 (17 HSPs)
chr5 (118-205)||(14138851-14138938)
chr5 (119-205)||(8145557-8145643)
chr5 (118-205)||(4892386-4892473)
chr5 (118-205)||(37321587-37321674)
chr5 (119-205)||(33584124-33584210)
chr5 (117-205)||(25398422-25398510)
chr5 (118-205)||(3521801-3521888)
chr5 (119-201)||(2477824-2477906)
chr5 (119-205)||(6043307-6043393)
chr5 (119-205)||(22912852-22912938)
chr5 (122-205)||(12850986-12851069)
chr5 (120-205)||(3362963-3363048)
chr5 (118-205)||(12614531-12614619)
chr5 (118-205)||(17545476-17545563)
chr5 (119-205)||(38899520-38899607)
chr5 (140-197)||(11360947-11361004)
chr5 (161-201)||(4433845-4433885)
[»] scaffold0085 (1 HSPs)
scaffold0085 (119-205)||(48033-48119)
[»] chr6 (16 HSPs)
chr6 (119-205)||(18365369-18365455)
chr6 (119-205)||(18370633-18370719)
chr6 (119-205)||(33695121-33695207)
chr6 (117-205)||(23290874-23290962)
chr6 (117-205)||(28675332-28675420)
chr6 (117-205)||(33696881-33696969)
chr6 (119-205)||(17175816-17175902)
chr6 (117-205)||(17705262-17705349)
chr6 (117-205)||(32702389-32702477)
chr6 (119-205)||(2309218-2309304)
chr6 (121-205)||(11548386-11548470)
chr6 (121-205)||(6031537-6031621)
chr6 (117-201)||(29693633-29693718)
chr6 (149-205)||(18889469-18889525)
chr6 (120-184)||(34238883-34238947)
chr6 (158-205)||(6127461-6127508)
[»] scaffold0204 (1 HSPs)
scaffold0204 (119-205)||(4580-4666)
[»] scaffold0178 (1 HSPs)
scaffold0178 (119-205)||(11805-11891)
[»] scaffold0471 (1 HSPs)
scaffold0471 (121-205)||(13026-13110)


Alignment Details
Target: chr4 (Bit Score: 94; Significance: 5e-46; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 53755207 - 53755106
Alignment:
Q  17 ataaagatgatttcaatgtgtcaaggggccaatttgaagatgattacaagttcaaatttgttaccataaaaactatataaccccacggtgtgtataaatc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  53755207 ataaagatgatttcaatgtgtcaaggggccaatttgaagatgattacaagttcaaatttgttaccataaaaactatttaaacccacggtgtgtataaatc 53755108  T
Q  117 aa 118  Q
    ||    
T  53755107 aa 53755106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 22199531 - 22199443
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  22199531 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatt 22199443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 53123303 - 53123215
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  53123303 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatt 53123215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 10442581 - 10442668
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  10442581 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 10442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 9089138 - 9089054
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  9089138 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatt 9089054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 46442116 - 46442028
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  46442116 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 46442028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 21802114 - 21802201
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  21802114 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatt 21802201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 31078609 - 31078700
Alignment:
Q  114 atcaaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||||||| ||||||||||||| || ||| || ||||||||| ||| |||||||||||||||||||||||| |||||||    
T  31078609 atcaaggaaaatgctagatatcaagaatgattttataaaaaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatt 31078700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 33530479 - 33530561
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||||||||||| ||||||||||||| || |||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  33530479 ggaaaatgctagatatcaagaatgattttataaaaaagatccaagaatgacatggcacaataatcacctttagatttcagtct 33530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 36073619 - 36073533
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  36073619 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 36073533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 47290338 - 47290250
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| |||  |||||||||| ||||||||||||||||||||    
T  47290338 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatt 47290250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 44893007 - 44893094
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  44893007 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 44893094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 44893696 - 44893610
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  44893696 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 44893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 2625109 - 2625021
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||| ||||||| ||||||||||||| ||||||||| ||| ||||| ||  ||||||||||| ||||||||||||||||||||    
T  2625109 aaggaaaatgttagatatcaagaatgattttataagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatt 2625021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 36073223 - 36073135
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| || |||||||||| |||||| || ||||||||| ||| |||||||| || ||||||||||||||||||||    
T  36073223 aaggaaaatgctagatatcaaaaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatt 36073135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 49387680 - 49387768
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||| ||||||| ||| ||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  49387680 aaggaaaatgttagatatcaaggatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 49387768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 7744906 - 7744993
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||| ||  ||||||||||| |||||||||||| |||||||    
T  7744906 aggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatt 7744993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 17655699 - 17655614
Alignment:
Q  121 aaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||| ||| || |||||| | ||||||||||||||||||||    
T  17655699 aaaatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatt 17655614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 4751719 - 4751631
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| |||||| |||||| |||||| ||  |||||||| ||| |||||||| || ||||||||||||||||||||    
T  4751719 aaggaaaatgctagatatcaagaataattttataagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatt 4751631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 24128507 - 24128423
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  24128507 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatt 24128423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 11314044 - 11314122
Alignment:
Q  117 aaggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatt 194  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||| ||| ||||||||||| | |||||||    
T  11314044 aaggaaaatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagatt 11314122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 23964269 - 23964345
Alignment:
Q  129 agatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||| ||||||||||||| |||||||||  |||||||| ||| || ||||||||||||||||||||| |||||||    
T  23964269 agatatcaagaatgattttataagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatt 23964345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 24392942 - 24392858
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| |||||||||||  ||||||| ||  |||||||| ||  ||||||||||||| ||||||||||||||||||    
T  24392942 aaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatt 24392858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 42671939 - 42671852
Alignment:
Q  119 ggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||| ||||||| ||||||||||||| |||||||||| ||||||||| ||| || |||||||||  |||||||| |||||||||    
T  42671939 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatt 42671852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 50156373 - 50156459
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||| ||||||| ||||||||||||| |||||| || ||||||||| ||| || |||||||| | ||||||||||||||||||    
T  50156373 aggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatgacataataatca-ccttagatttcagtctcatt 50156459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 37219904 - 37219823
Alignment:
Q  117 aaggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttca 197  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||  |||||||| ||| || |||||||||| ||||||||||    
T  37219904 aaggaaaatgttagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttca 37219823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 37934735 - 37934823
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttac-aagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||| ||||||||| || ||||||||  ||||||||| ||| ||||||||| ||||||||||| | |||||||||| |||||||    
T  37934735 aggaaaatgttagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatt 37934823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 36073256 - 36073339
Alignment:
Q  119 ggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    ||||||||||||||| ||| |||||||||| ||||||||||  |||||||||||| || |||||| |   ||||||||||||||    
T  36073256 ggaaaatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtct 36073339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 25063369 - 25063419
Alignment:
Q  119 ggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatga 168  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  25063369 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatga 25063419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 30563449 - 30563397
Alignment:
Q  149 caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||||| ||||||||| ||| |||||||||||   ||||||||||||||    
T  30563449 caagaaagattcaagaatgacatgacacaataatcacacttagatttcagtct 30563397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 15577640 - 15577728
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  15577640 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatt 15577728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 45637982 - 45637895
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  45637982 aggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 45637895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 3962250 - 3962162
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  3962250 aaggaaaatgctagatatcaagaatgattttataagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatt 3962162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 35445668 - 35445581
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| || ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  35445668 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatt 35445581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 42612082 - 42611999
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||||| ||| ||||||||||| ||||||||||||||||    
T  42612082 aggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtct 42611999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 24395241 - 24395155
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| || |||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  24395241 ggaaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 24395155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 25167646 - 25167735
Alignment:
Q  114 atcaaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctca 203  Q
    |||| |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||    
T  25167646 atcagggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca 25167735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 15329546 - 15329458
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| |||||||||||  |||||||||||||||||||    
T  15329546 aaggaaaatgctagatataaagaatgattttataagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatt 15329458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 34483108 - 34483022
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||| ||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| |||||||||||| |||||||    
T  34483108 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatt 34483022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 35876514 - 35876428
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||| || ||||| ||| ||||||||||| ||||||||||||||||||||    
T  35876514 ggaaaatgctagatatcaagaatgattttataagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatt 35876428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 4974532 - 4974616
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| ||||||||||||| || |||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  4974532 aaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 4974616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 48880721 - 48880808
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| |||||||||||  ||||||||||||| |||||    
T  48880721 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatt 48880808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 30848839 - 30848753
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||| ||||| |||||| || ||||||||| ||| ||||||||||| ||||| ||||||||||||||    
T  30848839 ggaaaatgctagatatcaagaatgcttttataagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatt 30848753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 15238655 - 15238568
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| |||||||||||  ||| ||| ||  |||||||| ||| ||||||||||||| ||||||||||||||||||    
T  15238655 aggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatt 15238568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 37476876 - 37476961
Alignment:
Q  120 gaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||| |||||||||||  ||||||||||  || ||||| ||| ||||||||||| | ||||||||||||||||||    
T  37476876 gaaaatgctagatatcaagaatgatttatcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatt 37476961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 29737406 - 29737328
Alignment:
Q  128 tagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||| ||||||||||||| ||||||||||  |||||| | ||||||||||||||| | ||||||||||||||||||    
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatt 29737328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 18037249 - 18037161
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| || ||||||||  ||||||||||  |||||||| |||  |||||||||| | ||||||||||||| ||||    
T  18037249 aaggaaaatgctagatatcaacaatgatttatcaagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatt 18037161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 20009895 - 20009980
Alignment:
Q  121 aaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||| ||||||| | ||||||||||| ||| |||||| ||||||||| ||| ||||||||||||  |||||||| |||||||||    
T  20009895 aaaatgatagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatt 20009980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 42696355 - 42696267
Alignment:
Q  118 aggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||| ||||||| || |||||||||| ||| ||| || ||||||||| |||  |||||||||| | ||||||||||||||||||    
T  42696355 aggaaaatgttagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatt 42696267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 6042149 - 6042061
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  6042149 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatt 6042061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 19650695 - 19650781
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  19650695 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatt 19650781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 3456336 - 3456248
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||    
T  3456336 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatt 3456248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 3089689 - 3089603
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  3089689 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatt 3089603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 3574321 - 3574407
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  3574321 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatt 3574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 3137207 - 3137295
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  3137207 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 3137295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 22426138 - 22426226
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| |||||||||||  |||||||||||||||||||    
T  22426138 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatt 22426226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 33114066 - 33113978
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| |||||||||||| |||||||    
T  33114066 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatt 33113978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 34482681 - 34482769
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  34482681 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 34482769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 37216846 - 37216934
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| |||  |||||||||| ||||||||||||||||||||    
T  37216846 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatt 37216934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 48161178 - 48161090
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||||||| || ||| ||||||||||| ||||||||||||||||||||    
T  48161178 aaggaaaatgctagatatcaagaatgattttataagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatt 48161090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 30385670 - 30385584
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||| |||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  30385670 ggaaaatgctaaatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 30385584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 8320378 - 8320463
Alignment:
Q  120 gaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||| || |||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  8320378 gaaaatgctagatatcaataatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 8320463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 8361825 - 8361920
Alignment:
Q  110 ataaatcaaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||| |||||||||||||||||| |||||||||||  ||||||| || ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  8361825 ataaattaaggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatt 8361920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 47738382 - 47738295
Alignment:
Q  119 ggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||| ||||||| ||||||||||||| |||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  47738382 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatt 47738295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 9796824 - 9796910
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| |||||||||||  |||||||||| ||||||||| |||||||||||||||   ||||||||||||||||||    
T  9796824 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatt 9796910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 36864825 - 36864914
Alignment:
Q  117 aaggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||| |||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  36864825 aaggaaaatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatt 36864914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 40328104 - 40328019
Alignment:
Q  117 aaggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||    
T  40328104 aaggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtct 40328019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 33145980 - 33145900
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||    
T  33145980 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtct 33145900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 2754989 - 2754903
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| |||||| |||||| |||||||||  |||||||| ||| ||||||||||| ||||| ||||||||||||||    
T  2754989 ggaaaatgctagatatcaagaatcattttataagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatt 2754903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 37522323 - 37522237
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| || |||||||| ||||||||||||||||||||    
T  37522323 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatt 37522237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 41224505 - 41224418
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| |||||||||||  ||||||| || ||||||||| ||| ||||||||||| | ||| |||||| |||||||    
T  41224505 aggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatt 41224418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 42921394 - 42921309
Alignment:
Q  121 aaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||||||||||||| ||||||| ||  |||||||| ||| ||||| ||||| | ||| ||||||||||||||    
T  42921394 aaaatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatt 42921309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 26613017 - 26612930
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttac-aagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||| ||||||| || ||||||||||  ||||||||| ||||||| | ||| ||||||||||| | ||||||||||||||||||    
T  26613017 ggaaaatgttagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatt 26612930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 33839794 - 33839719
Alignment:
Q  131 atattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||| ||||||||||||| |||||||||| ||||||||| ||| ||||||||||| | ||| ||||||||||||||    
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatt 33839719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 24343820 - 24343737
Alignment:
Q  119 ggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||| ||||||| ||||||||||||| ||| |||||| ||||||||| |||  |  ||||||| | ||||||||||||||    
T  24343820 ggaaaatgttagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtct 24343737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 46919164 - 46919082
Alignment:
Q  120 gaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    ||||||| ||||||| ||||||||||||| ||| |||||| ||| ||||| ||| || |||||||| || |||||||| ||||    
T  46919164 gaaaatgttagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtct 46919082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 41280 - 41194
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  41280 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatt 41194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 3559887 - 3559801
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  3559887 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatt 3559801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 20304923 - 20305011
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  20304923 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 20305011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 44094969 - 44094881
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  44094969 aaggaaaatgctagatatcaagaattattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatt 44094881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 25463946 - 25463860
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||| |||||||||    
T  25463946 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatt 25463860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 40215257 - 40215172
Alignment:
Q  120 gaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  40215257 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 40215172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 51737777 - 51737689
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  51737777 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 51737689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 37821629 - 37821715
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  37821629 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatt 37821715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 18404720 - 18404632
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||||||  |||||||| ||| |||||||||||  |||||||||||||||||||    
T  18404720 aaggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatt 18404632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 33786424 - 33786512
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| |||||||||||  |||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  33786424 aaggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 33786512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 36966501 - 36966589
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||| | ||| ||||||||||| ||||||||||||||||||||    
T  36966501 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatt 36966589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 41876235 - 41876323
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  41876235 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatt 41876323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 19015675 - 19015588
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||| |||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  19015675 aggaaaatgctacatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 19015588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 25973677 - 25973591
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||| ||||||||||||||    
T  25973677 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatt 25973591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 32000061 - 32000147
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| |||||||||||  |||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  32000061 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 32000147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 6883757 - 6883671
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| || |||| ||| ||||||||||||||||||||    
T  6883757 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatt 6883671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 19722894 - 19722970
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagattt 195  Q
    |||||||| ||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||    
T  19722894 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 40273976 - 40273892
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| |||||||||||  ||||||| || ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  40273976 aaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 40273892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 9910086 - 9910165
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcag 198  Q
    |||||||| ||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| |||||||||||||    
T  9910086 ggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcag 9910165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 33786696 - 33786634
Alignment:
Q  122 aaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatca 184  Q
    ||||||||||||| |||||||||||  |||||||||| ||||||||| ||| |||||||||||    
T  33786696 aaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatca 33786634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 10167672 - 10167587
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaag-atccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||||| || |||||||||||||||||| || |||  ||  |||||| |||||  |||||||||| ||||||||||||||||    
T  10167672 aaggaaaatgttacatattaagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtct 10167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 40273706 - 40273779
Alignment:
Q  123 aatgctagatattaagaatga-ttttacaagaaagatccaagaatgatatgtcacaataatcatctttagattt 195  Q
    |||||||||||| ||||| || |||| ||||||| || ||||||||| |||||| |||||||| | ||||||||    
T  40273706 aatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 52064373 - 52064422
Alignment:
Q  120 gaaaatgctagatattaagaatgatttta-caagaaagatccaagaatga 168  Q
    ||||||||||||||| || |||||||||| |||||||||| |||||||||    
T  52064373 gaaaatgctagatatcaaaaatgattttatcaagaaagattcaagaatga 52064422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 16256 - 16168
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  16256 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatt 16168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 26208 - 26120
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  26208 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 26120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 9e-29; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 1645757 - 1645845
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  1645757 aaggaaaatgctagatatcaagaatgattttataagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatt 1645845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 24211169 - 24211253
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  24211169 aaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatt 24211253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 15187831 - 15187744
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  15187831 aggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatt 15187744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 31347569 - 31347657
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| |||||||||||  |||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  31347569 aaggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 31347657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 1503637 - 1503724
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  1503637 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 1503724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 26041907 - 26041994
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  26041907 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 26041994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 37985850 - 37985937
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||| ||||    
T  37985850 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatt 37985937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 40779923 - 40780010
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  40779923 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 40780010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 3596836 - 3596922
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||  |||||||||||| ||||||||||| ||||||||||||||||||||    
T  3596836 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatt 3596922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 6108028 - 6108114
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  6108028 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatt 6108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 10044618 - 10044532
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| |||||||||||| |||||||    
T  10044618 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatt 10044532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 17841645 - 17841731
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  17841645 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 17841731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 30055786 - 30055700
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||| | |||||||| |||||||||    
T  30055786 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatt 30055700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 14129128 - 14129043
Alignment:
Q  120 gaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  14129128 gaaaatgctagatatcaagaatgattttataagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 14129043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 20091598 - 20091682
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  20091598 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 20091682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 34665649 - 34665565
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  34665649 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 34665565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 32065017 - 32064930
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  32065017 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatt 32064930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 25581034 - 25581120
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  25581034 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatt 25581120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 42754837 - 42754923
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||  |||||||| |||  |||||||||| ||||||||||||||||||||    
T  42754837 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatt 42754923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 38017201 - 38017116
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataa-tcatctttagatttcagtctcatt 205  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| |||||||| | | ||||||||||||||||||||    
T  38017201 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatt 38017116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 39772608 - 39772677
Alignment:
Q  130 gatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagt 199  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  39772608 gatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagt 39772677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 7022251 - 7022163
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| || ||||||||  |||||||||| ||||||||| | ||||||||||||  | ||||||||||||||||||    
T  7022251 aaggaaaatgctagatatcaacaatgatttatcaagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatt 7022163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 37132477 - 37132558
Alignment:
Q  121 aaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||||||||| ||||||||||||| |||||||||| || |||||| ||| ||||||||||| | ||||||||||||||    
T  37132477 aaaatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtct 37132558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 7017651 - 7017739
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| |||||||||||  ||||||| ||  |||||||| || | | |||||||||| ||||||||||||||||||    
T  7017651 aaggaaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatt 7017739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 3890412 - 3890486
Alignment:
Q  122 aaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagattt 195  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || |||||||| | ||||||||    
T  3890412 aaatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattt 3890486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 41819593 - 41819649
Alignment:
Q  149 caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  41819593 caagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatt 41819649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 30834849 - 30834931
Alignment:
Q  118 aggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagt 199  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||  |||||||| ||| || ||||| || | ||||||||||||    
T  30834849 aggaaaatgatagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagt 30834931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 32394114 - 32394041
Alignment:
Q  131 atattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||| ||||||||||||| || ||| ||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  32394114 atatcaagaatgattttataaaaaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatt 32394041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 35353299 - 35353225
Alignment:
Q  131 atattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||| |||| | |||||||    
T  35353299 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatt 35353225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 8454062 - 8454017
Alignment:
Q  160 caagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  8454062 caagaatgacatggcacaataatcacctttagatttcagtctcatt 8454017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 27835293 - 27835334
Alignment:
Q  164 aatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||| ||||||||||||| |||||||||| |||||||    
T  27835293 aatgatatgacacaataatcatccttagatttcaatctcatt 27835334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 9e-29; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 13355120 - 13355032
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||    
T  13355120 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatt 13355032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 3989342 - 3989260
Alignment:
Q  123 aatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||| | ||||||||||||||||||||    
T  3989342 aatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatt 3989260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 7475303 - 7475389
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||||||| || |||||||| ||||||||||||||||||||    
T  7475303 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatt 7475389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 9293370 - 9293456
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  9293370 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatt 9293456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 10662158 - 10662072
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  10662158 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatt 10662072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 33380477 - 33380391
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  33380477 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 33380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 35161029 - 35160943
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  35161029 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 35160943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 43331183 - 43331096
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| |||||||||||  |||||||||| ||||||||| |||  |||||||||| ||||||||||||||||||||    
T  43331183 aggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatt 43331096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 23267857 - 23267943
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  23267857 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 23267943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 22592985 - 22592906
Alignment:
Q  117 aaggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagattt 195  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||| ||| ||||||||||| | ||||||||    
T  22592985 aaggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagattt 22592906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 31174633 - 31174716
Alignment:
Q  122 aaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| |||||||| |  |||||||||||| |||||||    
T  31174633 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatt 31174716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 21393483 - 21393566
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| |||||||||||  ||||||| || ||||||||| ||| ||||||||||| | ||| ||||||||||||||    
T  21393483 aaaatgctagatatcaagaatgatttatcaagaaa-attcaagaatgacatgacacaataatcacccttaaatttcagtctcatt 21393566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 21936322 - 21936266
Alignment:
Q  149 caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||| ||||||||||||| ||| ||||||||||| |||||||||||||| |||||    
T  21936322 caagaatgatccaagaatgacatggcacaataatcacctttagatttcagtttcatt 21936266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 9723677 - 9723594
Alignment:
Q  119 ggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||| ||||||| ||||||||||| | ||||||| ||  |||||||| ||| || |||||||| ||||||||||||||||    
T  9723677 ggaaaatgttagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtct 9723594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 16767287 - 16767343
Alignment:
Q  149 caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||| ||||||||| ||| |||||||||||   ||||||||||||||||||    
T  16767287 caagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatt 16767343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 34320961 - 34320998
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaa 154  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  34320961 aaggaaaatgctagatatcaagaatgatttttcaagaa 34320998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 34320993 - 34321038
Alignment:
Q  160 caagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  34320993 caagaatgacatggcacaataatcacccttagatttcagtctcatt 34321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 14138938 - 14138851
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||| |||||||||||| |||||||    
T  14138938 aggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatt 14138851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 8145643 - 8145557
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  8145643 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 8145557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 4892473 - 4892386
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  4892473 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 4892386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 37321587 - 37321674
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  37321587 aggaaaatgctagatatcaagaatgattttataagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatt 37321674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 33584124 - 33584210
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  33584124 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 33584210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 25398510 - 25398422
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||| ||||| ||| ||||||||||| ||||||||||||||||||||    
T  25398510 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatt 25398422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 3521801 - 3521888
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  3521801 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 3521888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 2477906 - 2477824
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||| ||| |||||| |||| ||||||||||||||||    
T  2477906 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtct 2477824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 6043307 - 6043393
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  6043307 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 6043393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 22912852 - 22912938
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| |||||||||||  |||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  22912852 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 22912938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 122 - 205
Target Start/End: Complemental strand, 12851069 - 12850986
Alignment:
Q  122 aaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||| ||||||||||||| |||||| || ||||||||| ||| |||||||| || ||||||||||||||||||||    
T  12851069 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatt 12850986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 3363048 - 3362963
Alignment:
Q  120 gaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| |||||||| || ||||||||||||||||||||    
T  3363048 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatt 3362963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 12614531 - 12614619
Alignment:
Q  118 aggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| ||| ||||||||| ||| ||||||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  12614531 aggaaaatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 12614619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 17545476 - 17545563
Alignment:
Q  118 aggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||||||||| |||||||||||  ||| ||| ||  |||||||| ||| ||||||||||||| ||||||||||||||||||    
T  17545476 aggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatt 17545563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 38899520 - 38899607
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaaga-tccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| || ||| | | ||||||||| ||| |||||||| || ||||||||||||||||||||    
T  38899520 ggaaaatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatt 38899607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 11360947 - 11361004
Alignment:
Q  140 atgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttca 197  Q
    ||||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  11360947 atgattttataagaaagattcaagaatgacatggcacaataatcatctttagatttca 11361004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 4433845 - 4433885
Alignment:
Q  161 aagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||| ||| ||||||||||| ||||||||||||||||    
T  4433845 aagaatgacatggcacaataatcacctttagatttcagtct 4433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 48119 - 48033
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||    
T  48119 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatt 48033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 1e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 18365369 - 18365455
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  18365369 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatt 18365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 18370633 - 18370719
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  18370633 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatt 18370719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 33695121 - 33695207
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  33695121 ggaaaatgctagatatcaagaatgattttataagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatt 33695207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 23290874 - 23290962
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| || |||||||||| ||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||    
T  23290874 aaggaaaatgctagatatcaaaaatgattttataagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatt 23290962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 28675420 - 28675332
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  28675420 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatt 28675332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 33696969 - 33696881
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||||||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  33696969 aaggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 33696881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 17175816 - 17175902
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||| |||  |||||||||| ||||||||||||||||||||    
T  17175816 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatt 17175902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 17705262 - 17705349
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  17705262 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatca-ccttagatttcagtctcatt 17705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 32702477 - 32702389
Alignment:
Q  117 aaggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||||||||| ||| ||||||||| | ||||||||||||||||||||    
T  32702477 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatt 32702389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 2309218 - 2309304
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||  ||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  2309218 ggaaaatgctagatatcaacgatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 2309304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 11548386 - 11548470
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| |||||||||||  |||||| ||| ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  11548386 aaaatgctagatatcaagaatgatttatcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcatt 11548470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 6031537 - 6031621
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||| || ||||| ||||||||||||| || ||||||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  6031537 aaaatactggatatcaagaatgattttataaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 6031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 29693718 - 29693633
Alignment:
Q  117 aaggaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtct 201  Q
    |||||||||||||||||| ||||||||||||| ||||||||||  |||||||| ||| || |||||| | | ||||||||||||||    
T  29693718 aaggaaaatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtct 29693633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 18889469 - 18889525
Alignment:
Q  149 caagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||| ||| ||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  18889469 caagaatgattcaagaatgacatggcacaataatcacctttagatttcagtctcatt 18889525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 34238883 - 34238947
Alignment:
Q  120 gaaaatgctagatattaagaatgatttta-caagaaagatccaagaatgatatgtcacaataatca 184  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||||||||| ||| |||||||||||    
T  34238883 gaaaatgctagatatcaagaatgattttatcaag-aagattcaagaatgacatgacacaataatca 34238947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 6127508 - 6127461
Alignment:
Q  158 tccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||||    
T  6127508 tccaagaatgacatggcacaataatcacttttagatttcagtctcatt 6127461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 4666 - 4580
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||||| ||||||||||||| |||||| ||  |||||||||||| ||||||||||| ||||||||||||||||||||    
T  4666 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatt 4580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 11891 - 11805
Alignment:
Q  119 ggaaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||| ||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  11891 ggaaaatgttagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatt 11805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 13110 - 13026
Alignment:
Q  121 aaaatgctagatattaagaatgattttacaagaaagatccaagaatgatatgtcacaataatcatctttagatttcagtctcatt 205  Q
    |||||||||||||| ||||||||||||| |||||| ||  |||||||| ||| ||||||||| | ||||||||||||||||||||    
T  13110 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatt 13026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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