View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4679_low_31 (Length: 214)
Name: NF4679_low_31
Description: NF4679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4679_low_31 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 24988533 - 24988684
Alignment:
| Q |
17 |
ctagggtttgagaagtcaatgtatgtatctgaatatgtcattttttgagtcggtccatatgagtatattatcttaaaggaataaggataatgttattaat |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24988533 |
ctagggtttgagaagtcaatgtatgtatctgaatatgtcatttttttagtccgtccatatgagtatattatcttaaaagaataaggataatgttattaat |
24988632 |
T |
|
| Q |
117 |
taattccttcaaaacaaaaatgttattaattaatgatttactgtatagtaat |
168 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24988633 |
taattccttcaaaacaaaaatgttattaattaatgatttactgtatagtaat |
24988684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University