View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4680_high_8 (Length: 329)
Name: NF4680_high_8
Description: NF4680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4680_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 13 - 311
Target Start/End: Original strand, 34505096 - 34505394
Alignment:
| Q |
13 |
tgagaagaaatgcaacgacgacagctataacactaatctttccttctagtaacacacgtgtatgtccaagaaacacctatttgactcatttgaccttacg |
112 |
Q |
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| T |
34505096 |
tgagaacaaatgcaactacgacagctataacactaatctttccttctagtaacacacgtgtatgtccatgaaacacctatttgactcatttgaccttacg |
34505195 |
T |
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| Q |
113 |
tgtcaagcaattacacgctgtctccaacggttttctatggtcctagacagaccacattaatctcaaaactcaat-gggtaccccacgtaacttatattac |
211 |
Q |
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| T |
34505196 |
tgtcaagcaattacacgctgtctccaacggttttctatggtcctagacagaccacattaatatcaaaactctatggggtaccccacgtaacttatattac |
34505295 |
T |
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| Q |
212 |
ccacctgttaaattctctttagatttattatattaattaataaataaaaacatacaatctcgtttgatttattatattagtacatgtctatagttttgtc |
311 |
Q |
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| T |
34505296 |
ccacctgttaaattctctttagattcctt-ttttattttataaataaaaacatacaatttcgtttgatttattatattagtacatgtctatagttttgtc |
34505394 |
T |
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