View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4681_high_16 (Length: 413)

Name: NF4681_high_16
Description: NF4681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4681_high_16
NF4681_high_16
[»] chr5 (34 HSPs)
chr5 (6-89)||(40275766-40275849)
chr5 (6-95)||(43346900-43346989)
chr5 (6-95)||(20962567-20962656)
chr5 (6-95)||(26637048-26637137)
chr5 (6-95)||(42012184-42012273)
chr5 (6-98)||(27480986-27481078)
chr5 (6-95)||(36703851-36703940)
chr5 (6-94)||(15200552-15200640)
chr5 (1-95)||(27481329-27481423)
chr5 (1-95)||(29543020-29543114)
chr5 (6-95)||(555711-555800)
chr5 (6-95)||(14206826-14206915)
chr5 (6-95)||(35602828-35602917)
chr5 (1-95)||(11855660-11855754)
chr5 (1-95)||(12970535-12970629)
chr5 (6-95)||(6091692-6091781)
chr5 (6-95)||(18412186-18412275)
chr5 (6-95)||(19065510-19065599)
chr5 (6-94)||(3913206-3913294)
chr5 (1-64)||(8646427-8646490)
chr5 (1-95)||(4765565-4765659)
chr5 (1-87)||(28429673-28429759)
chr5 (1-95)||(28602527-28602621)
chr5 (1-83)||(31583080-31583161)
chr5 (6-95)||(41783625-41783714)
chr5 (6-95)||(6930617-6930710)
chr5 (6-94)||(28023810-28023898)
chr5 (1-94)||(8406866-8406959)
chr5 (6-63)||(32535914-32535971)
chr5 (6-95)||(36978176-36978265)
chr5 (10-94)||(35348534-35348616)
chr5 (6-95)||(22935917-22936006)
chr5 (6-62)||(17251789-17251845)
chr5 (6-94)||(19089723-19089811)
[»] scaffold0702 (1 HSPs)
scaffold0702 (1-95)||(3570-3664)
[»] scaffold0662 (1 HSPs)
scaffold0662 (1-95)||(4440-4534)
[»] chr2 (44 HSPs)
chr2 (9-95)||(25455004-25455090)
chr2 (1-94)||(45694160-45694253)
chr2 (1-95)||(18713662-18713756)
chr2 (9-95)||(39819676-39819762)
chr2 (1-85)||(14253494-14253578)
chr2 (6-95)||(1988288-1988377)
chr2 (1-98)||(5770112-5770209)
chr2 (6-95)||(14832787-14832876)
chr2 (6-95)||(37533929-37534018)
chr2 (6-94)||(4875752-4875840)
chr2 (1-108)||(11071577-11071684)
chr2 (1-95)||(28311702-28311796)
chr2 (1-95)||(37233401-37233495)
chr2 (1-95)||(40569992-40570086)
chr2 (6-95)||(21737405-21737494)
chr2 (6-95)||(40950864-40950953)
chr2 (6-93)||(6571664-6571751)
chr2 (1-95)||(20426488-20426582)
chr2 (1-95)||(34356705-34356799)
chr2 (6-95)||(638570-638659)
chr2 (6-95)||(9733851-9733940)
chr2 (6-95)||(37192499-37192588)
chr2 (6-95)||(39995136-39995225)
chr2 (6-95)||(41750506-41750595)
chr2 (6-89)||(11763382-11763465)
chr2 (1-95)||(346350-346444)
chr2 (1-95)||(6171763-6171857)
chr2 (6-95)||(24499419-24499506)
chr2 (1-95)||(42674666-42674760)
chr2 (6-95)||(27357968-27358057)
chr2 (6-94)||(5002843-5002931)
chr2 (7-95)||(7007551-7007639)
chr2 (6-94)||(13539645-13539733)
chr2 (1-95)||(2050838-2050932)
chr2 (1-95)||(14777503-14777597)
chr2 (6-64)||(41729166-41729224)
chr2 (6-95)||(4685156-4685245)
chr2 (1-42)||(17965955-17965996)
chr2 (6-42)||(2521652-2521688)
chr2 (6-94)||(3902433-3902521)
chr2 (6-95)||(1723233-1723322)
chr2 (6-95)||(14403238-14403327)
chr2 (6-95)||(45409227-45409316)
chr2 (6-94)||(8868670-8868757)
[»] chr4 (51 HSPs)
chr4 (6-98)||(10400807-10400899)
chr4 (6-95)||(26165345-26165434)
chr4 (6-95)||(27555391-27555480)
chr4 (6-94)||(45596249-45596337)
chr4 (1-95)||(6279926-6280020)
chr4 (1-95)||(18931729-18931823)
chr4 (1-95)||(42773924-42774018)
chr4 (6-95)||(23686768-23686857)
chr4 (6-95)||(35999667-35999756)
chr4 (6-88)||(8322226-8322308)
chr4 (6-104)||(34049593-34049691)
chr4 (1-95)||(39730298-39730392)
chr4 (1-95)||(45747801-45747895)
chr4 (6-95)||(18405239-18405328)
chr4 (6-95)||(24805090-24805179)
chr4 (6-95)||(25932422-25932511)
chr4 (6-95)||(30415883-30415972)
chr4 (6-95)||(31937874-31937963)
chr4 (6-95)||(40435881-40435970)
chr4 (6-95)||(41744225-41744314)
chr4 (6-95)||(47670343-47670432)
chr4 (6-95)||(48879306-48879395)
chr4 (6-95)||(51968758-51968847)
chr4 (6-94)||(44309741-44309829)
chr4 (1-64)||(13230025-13230088)
chr4 (1-95)||(27762904-27762998)
chr4 (13-95)||(36860106-36860187)
chr4 (6-95)||(38414187-38414274)
chr4 (6-64)||(50672941-50672999)
chr4 (1-95)||(55968005-55968099)
chr4 (6-95)||(39498806-39498895)
chr4 (6-95)||(39502145-39502234)
chr4 (6-95)||(39835312-39835401)
chr4 (6-95)||(48518896-48518985)
chr4 (6-94)||(7258944-7259031)
chr4 (6-58)||(12275953-12276005)
chr4 (6-42)||(47426299-47426335)
chr4 (6-61)||(52469679-52469734)
chr4 (1-95)||(936102-936196)
chr4 (28-78)||(30790518-30790568)
chr4 (1-35)||(36858441-36858475)
chr4 (6-95)||(41859052-41859141)
chr4 (6-95)||(43723245-43723334)
chr4 (1-41)||(25916092-25916132)
chr4 (6-95)||(18405734-18405823)
chr4 (6-35)||(38394887-38394916)
chr4 (6-34)||(9297144-9297172)
chr4 (6-61)||(9327284-9327340)
chr4 (6-61)||(9374043-9374099)
chr4 (6-42)||(32953504-32953540)
chr4 (6-42)||(34238012-34238048)
[»] chr3 (37 HSPs)
chr3 (1-95)||(12930947-12931040)
chr3 (6-95)||(24784184-24784271)
chr3 (6-95)||(6831962-6832050)
chr3 (6-95)||(31435928-31436017)
chr3 (6-93)||(40584577-40584664)
chr3 (1-95)||(27823246-27823340)
chr3 (6-95)||(43132162-43132251)
chr3 (6-95)||(48339762-48339851)
chr3 (6-90)||(1246912-1246996)
chr3 (19-81)||(13643060-13643122)
chr3 (1-95)||(26848994-26849088)
chr3 (1-95)||(28124441-28124535)
chr3 (1-95)||(40908237-40908331)
chr3 (1-95)||(47114862-47114956)
chr3 (6-95)||(11239125-11239214)
chr3 (6-95)||(24574552-24574641)
chr3 (6-95)||(33647708-33647797)
chr3 (6-95)||(44952285-44952374)
chr3 (1-95)||(6231506-6231600)
chr3 (1-95)||(20414470-20414564)
chr3 (9-95)||(28770215-28770301)
chr3 (1-95)||(33217918-33218012)
chr3 (12-85)||(10822733-10822806)
chr3 (1-42)||(31611043-31611084)
chr3 (6-62)||(12228294-12228350)
chr3 (6-42)||(18460916-18460952)
chr3 (1-94)||(39932529-39932624)
chr3 (1-95)||(8476313-8476407)
chr3 (1-95)||(9320453-9320547)
chr3 (15-61)||(26849194-26849240)
chr3 (6-95)||(1099175-1099264)
chr3 (6-95)||(20297770-20297859)
chr3 (6-94)||(28139726-28139814)
chr3 (1-61)||(53165764-53165824)
chr3 (1-36)||(46359924-46359959)
chr3 (9-95)||(2565465-2565551)
chr3 (6-35)||(32071421-32071450)
[»] chr1 (54 HSPs)
chr1 (6-95)||(13931889-13931978)
chr1 (6-95)||(29091644-29091733)
chr1 (1-94)||(30240982-30241075)
chr1 (6-95)||(19083110-19083199)
chr1 (6-95)||(19130998-19131087)
chr1 (6-95)||(38519067-38519156)
chr1 (6-94)||(20504995-20505083)
chr1 (1-95)||(5518509-5518603)
chr1 (1-95)||(52186051-52186145)
chr1 (6-95)||(6911471-6911560)
chr1 (6-95)||(52630751-52630840)
chr1 (1-94)||(52699472-52699565)
chr1 (10-93)||(11014448-11014531)
chr1 (8-95)||(49822922-49823009)
chr1 (1-95)||(1007720-1007814)
chr1 (1-95)||(1597347-1597441)
chr1 (1-95)||(12190182-12190276)
chr1 (6-95)||(13521299-13521387)
chr1 (1-94)||(13653824-13653917)
chr1 (6-95)||(47037435-47037524)
chr1 (6-94)||(9011167-9011255)
chr1 (6-85)||(1227893-1227972)
chr1 (1-104)||(20260082-20260185)
chr1 (1-95)||(2430469-2430563)
chr1 (1-95)||(39329581-39329675)
chr1 (1-59)||(46960600-46960658)
chr1 (6-95)||(6978748-6978837)
chr1 (6-95)||(9115815-9115904)
chr1 (6-95)||(16257013-16257102)
chr1 (6-95)||(25789741-25789830)
chr1 (6-95)||(32824900-32824989)
chr1 (6-95)||(36361760-36361849)
chr1 (6-95)||(39930435-39930524)
chr1 (6-95)||(47677621-47677709)
chr1 (6-95)||(48916027-48916116)
chr1 (1-95)||(24116342-24116434)
chr1 (1-95)||(2632825-2632919)
chr1 (1-95)||(3572570-3572664)
chr1 (1-95)||(8331987-8332081)
chr1 (6-88)||(13440373-13440455)
chr1 (1-95)||(14788696-14788790)
chr1 (6-95)||(31806761-31806848)
chr1 (1-95)||(46666681-46666775)
chr1 (6-95)||(9831875-9831964)
chr1 (6-95)||(35187434-35187523)
chr1 (1-94)||(37261820-37261913)
chr1 (6-95)||(51445085-51445174)
chr1 (6-95)||(38964684-38964773)
chr1 (1-61)||(17475360-17475420)
chr1 (1-42)||(4683432-4683473)
chr1 (6-35)||(37436686-37436715)
chr1 (1-42)||(50190823-50190864)
chr1 (6-42)||(29769490-29769526)
chr1 (9-95)||(39871936-39872018)
[»] scaffold0238 (1 HSPs)
scaffold0238 (6-94)||(23302-23390)
[»] chr7 (44 HSPs)
chr7 (1-95)||(18824117-18824212)
chr7 (6-93)||(43445890-43445977)
chr7 (6-95)||(41684027-41684116)
chr7 (1-95)||(45440879-45440974)
chr7 (9-95)||(6656229-6656315)
chr7 (9-95)||(6656478-6656563)
chr7 (1-95)||(30685997-30686091)
chr7 (6-95)||(48160596-48160685)
chr7 (6-98)||(25924639-25924731)
chr7 (1-95)||(11000674-11000769)
chr7 (6-94)||(47246070-47246160)
chr7 (6-88)||(5543143-5543225)
chr7 (1-95)||(25045623-25045716)
chr7 (1-95)||(35488194-35488288)
chr7 (1-95)||(44566017-44566111)
chr7 (1-95)||(45448914-45449008)
chr7 (6-83)||(10902667-10902744)
chr7 (6-95)||(11329970-11330059)
chr7 (6-95)||(25098046-25098135)
chr7 (6-95)||(27213860-27213949)
chr7 (6-95)||(33378819-33378908)
chr7 (6-95)||(39554160-39554249)
chr7 (6-95)||(40212866-40212955)
chr7 (6-95)||(43949222-43949311)
chr7 (6-95)||(38528714-38528801)
chr7 (1-95)||(48314094-48314188)
chr7 (1-95)||(48341334-48341428)
chr7 (6-95)||(16825359-16825448)
chr7 (6-95)||(27248270-27248359)
chr7 (6-95)||(27419229-27419318)
chr7 (6-95)||(28904191-28904280)
chr7 (6-95)||(37534108-37534197)
chr7 (6-95)||(41632369-41632458)
chr7 (6-95)||(45265053-45265142)
chr7 (1-64)||(9947026-9947089)
chr7 (1-95)||(38396371-38396465)
chr7 (6-95)||(45045603-45045692)
chr7 (6-94)||(31598654-31598742)
chr7 (6-95)||(34930470-34930561)
chr7 (1-95)||(38544166-38544260)
chr7 (1-47)||(45723121-45723167)
chr7 (6-95)||(8419594-8419683)
chr7 (1-95)||(9814223-9814313)
chr7 (6-95)||(44820231-44820320)
[»] chr8 (33 HSPs)
chr8 (1-95)||(33444631-33444724)
chr8 (6-95)||(25899609-25899698)
chr8 (6-94)||(15226941-15227029)
chr8 (1-95)||(21137137-21137231)
chr8 (6-95)||(38132742-38132831)
chr8 (1-95)||(1554359-1554453)
chr8 (1-95)||(35394362-35394456)
chr8 (6-95)||(7317350-7317439)
chr8 (6-95)||(29421494-29421583)
chr8 (1-93)||(41432712-41432804)
chr8 (1-97)||(43871969-43872065)
chr8 (1-95)||(16313512-16313606)
chr8 (1-95)||(32660938-32661032)
chr8 (1-94)||(3049981-3050074)
chr8 (6-95)||(7931216-7931305)
chr8 (6-95)||(12710622-12710711)
chr8 (6-95)||(18726624-18726713)
chr8 (6-95)||(26062121-26062210)
chr8 (6-95)||(42755844-42755933)
chr8 (6-94)||(16218949-16219037)
chr8 (1-95)||(18298084-18298178)
chr8 (1-95)||(35818429-35818523)
chr8 (1-95)||(38364053-38364147)
chr8 (6-95)||(14763936-14764025)
chr8 (6-95)||(26601943-26602032)
chr8 (1-93)||(37392553-37392645)
chr8 (6-94)||(38437431-38437519)
chr8 (6-98)||(40197078-40197170)
chr8 (1-95)||(25837883-25837977)
chr8 (6-95)||(10896222-10896311)
chr8 (9-63)||(19160778-19160832)
chr8 (1-95)||(41228719-41228813)
chr8 (6-79)||(44161731-44161806)
[»] chr6 (16 HSPs)
chr6 (6-95)||(6705770-6705859)
chr6 (1-89)||(21008035-21008123)
chr6 (6-93)||(16968902-16968989)
chr6 (6-95)||(345835-345925)
chr6 (6-95)||(7053575-7053664)
chr6 (1-98)||(8314885-8314982)
chr6 (6-94)||(9760376-9760464)
chr6 (12-95)||(8029316-8029399)
chr6 (1-95)||(2657672-2657766)
chr6 (6-95)||(14170990-14171079)
chr6 (6-95)||(3869482-3869571)
chr6 (251-301)||(8769632-8769683)
chr6 (6-95)||(1316995-1317084)
chr6 (6-95)||(7344088-7344177)
chr6 (6-35)||(14781685-14781714)
chr6 (6-95)||(18897898-18897987)
[»] scaffold0189 (1 HSPs)
scaffold0189 (1-97)||(28955-29051)
[»] scaffold0006 (3 HSPs)
scaffold0006 (6-95)||(119297-119387)
scaffold0006 (1-94)||(143585-143678)
scaffold0006 (6-95)||(201902-201991)


Alignment Details
Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 40275849 - 40275766
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaa 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40275849 ataaaatttagcaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaaatctacaaatataacttgaaa 40275766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 43346989 - 43346900
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||  ||  | ||||||||||||||||||||||||||    
T  43346989 ataaaatttagtaaacttgtaacaaacacatacatatgtatttttatgattttattttcaggaatctacaaatataacttgaaacaaaca 43346900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 20962567 - 20962656
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| ||  ||||||  ||| ||||||||||||| | ||||| ||||||||||||||||||||    
T  20962567 ataaaatttagtaaacttgtaacaaacataggcacgtgtattcctatcattttattcccaagaatctacgaatataacttgaaacaaaca 20962656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 26637137 - 26637048
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||| |||||||||| || || ||| ||||||||||||  | || |||||||||||||||||||||||    
T  26637137 ataaaatttagtaaacttgtaacaaatatagacatatataattctatcattttattcccattaatcaacaaatataacttgaaacaaaca 26637048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 42012273 - 42012184
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| | | || ||||||||| ||| |||||||||    
T  42012273 ataaaatttagtaaatttgtaacaaacatagacatatgtatttctatcattttattcccgagaatcaacaaatatagcttcaaacaaaca 42012184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 27480986 - 27481078
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatac 98  Q
    ||||||||||||||||||||||||||||||||||||  ||||  ||| ||||||||| ||||| || ||||||||||||||||| ||| ||||    
T  27480986 ataaaatttagtaaacttgtaacaaacatagacatacatattcctatcattttattctcaaaaatcaacaaatataacttgaaataaaaatac 27481078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 36703851 - 36703940
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||||||||||  |||| ||| ||||||||||| | | || |||| ||||||||||||||||||    
T  36703851 ataaattttagtaaacttgtaacaaacatagacatatacatttctatcattttattcccgataatcaacaattataacttgaaacaaaca 36703940  T

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Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 15200640 - 15200552
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||| |||| || |||||||||||||||||| ||||| ||| ||||||||  ||||| |||| ||||||||||||||||||||    
T  15200640 ataaaatttaataaatttataacaaacatagacatatatatttatatcattttattttcaaaaatctataaatataacttgaaacaaac 15200552  T

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Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27481329 - 27481423
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||| |||||| || | || ||||||||||||||||||    
T  27481329 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttatttccaaaaatcaaaaattataacttgaaacaaaca 27481423  T

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Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 29543114 - 29543020
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||   || ||||||||||||  | || |||| ||||||||||||||||||    
T  29543114 cgggaataaaatttagtaaacttgtaacaaacatagacatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaaca 29543020  T

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Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 555800 - 555711
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||||||||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  555800 ataaattttagtaaacttgtaacaaacatagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 555711  T

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Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 14206915 - 14206826
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||  || || |||| ||||||||||||||||||    
T  14206915 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaacaaaca 14206826  T

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Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 35602917 - 35602828
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| ||||||||||||||| |||  |||||| |||||| | ||||| |||| |||| |||||||||||||||| |||||||||    
T  35602917 ataaaatttaataaacttgtaacaaatatatgcatatgcatttttctgatttttttccgaaaaatctacaaatataacttcaaacaaaca 35602828  T

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Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11855754 - 11855660
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| ||||||||| ||  | || |||| ||||||||||||||||||    
T  11855754 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattctcaggaatcaacaattataacttgaaacaaaca 11855660  T

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Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12970629 - 12970535
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  12970629 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 12970535  T

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Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6091692 - 6091781
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  6091692 ataaattttagtaaacttgtaacaaacataggcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaaca 6091781  T

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Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 18412186 - 18412275
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| ||||||||||||  | || | || ||||||||||||||||||    
T  18412186 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccaggaatcaataattataacttgaaacaaaca 18412275  T

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Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 19065599 - 19065510
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  19065599 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 19065510  T

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Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 3913294 - 3913206
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||||||||||| |||||| ||||||| |||| | ||||| |||  |||||||||||| | ||||| |||||||||||||| ||||    
T  3913294 ataaaatttagtaaatttgtaataaacatacacatgtatatttctatcgttttattcccaagaatctacgaatataacttgaaataaac 3913206  T

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Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8646490 - 8646427
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattccc 64  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||    
T  8646490 cgggaataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattccc 8646427  T

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Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4765659 - 4765565
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||| |||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  4765659 cgggaataaaatttaataaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 4765565  T

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Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28429673 - 28429759
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttga 87  Q
    |||| |||||||||||||||||||||||||| |||| ||| | ||||| ||| |||||||| | || | ||||| ||||||||||||    
T  28429673 cgggaataaaatttagtaaacttgtaacaaatataggcatgtatatttctatcattttatttctaagaatctacgaatataacttga 28429759  T

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Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28602527 - 28602621
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  28602527 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 28602621  T

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Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31583161 - 31583080
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataac 83  Q
    |||| |||||||||||||||||||||||||||||||||| || ||||| |||  ||||||| ||| || ||||| ||||||||    
T  31583161 cgggaataaaatttagtaaacttgtaacaaacatagaca-atatatttctatcgttttatttccagaaatctacgaatataac 31583080  T

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Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 41783714 - 41783625
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||| |||||||||||  | | |  |||||||| |||||| |||||| | |||| ||||||||||||||| |||||    
T  41783714 ataaaatttagtaaacttataacaaacatatgcgtgtacatttttatgattttaatcccaagaatctataaatataacttgaaataaaca 41783625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6930617 - 6930710
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagac----atatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||| ||    |||| ||||| ||| ||||||||| ||  | || ||||||||||||||||| |||||    
T  6930617 ataaaatttagtaaacttgtaacaaacataaacatatatatatatttctatcattttattctcaggaatcaacaaatataacttgaaataaaca 6930710  T

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Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 28023810 - 28023898
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||| | ||||||||||||| ||||||||   |||||||||||||||||||  | || |||| |||||||| |||||| ||||    
T  28023810 ataaaatttaatgaacttgtaacaaatatagacatgaatatttttataattttattctaagaaatctataaatataatttgaaataaac 28023898  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8406866 - 8406959
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| ||||||||||| |||||||||||||| |||| ||| |  |||  ||| ||||||||| | ||| || |||| |||||||||||||||||    
T  8406866 cgggaataaaatttagcaaacttgtaacaaatataggcatgtacattcctatcattttattctcgaaaatcaacaattataacttgaaacaaac 8406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 32535914 - 32535971
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcc 63  Q
    ||||| |||||||||||||||||||||||| ||||||  |||| ||| ||||||||||    
T  32535914 ataaattttagtaaacttgtaacaaacataaacatatacatttctatcattttattcc 32535971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 36978265 - 36978176
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||| ||||  ||||||||||||||||||||| ||||| ||| ||||||||  || || | ||| ||| ||| ||||||||||||    
T  36978265 ataaaattttgtaagtttgtaacaaacatagacatatatatttctatcattttattttcagaaatatacgaatgtaatttgaaacaaaca 36978176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 35348616 - 35348534
Alignment:
Q  10 aatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||||||||||||||||||||||||||| | || || |||  |||||||||| ||| ||||| | ||||| |||||||||||    
T  35348616 aatttagtaaacttgtaacaaacatagacatgtata-ttctatctttttattcccgaaaatctacgattataa-ttgaaacaaac 35348534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 22936006 - 22935917
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||  |||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  22936006 ataaaataaagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 22935917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 17251789 - 17251845
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattc 62  Q
    ||||||||||||||| || ||||||||||| |||| | ||||| ||| |||||||||    
T  17251789 ataaaatttagtaaaattataacaaacataaacatgtatatttctatcattttattc 17251845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 19089811 - 19089723
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||| ||||||| ||||||||||| ||||   ||||| |||  |||||||||||  | | ||| |||||||||| ||||||||    
T  19089811 ataaaatttaataaacttataacaaacataaacatgcatatttctatttttttattcccaggaatttacgaatataacttaaaacaaac 19089723  T

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Target: scaffold0702 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3664 - 3570
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | || ||||||||||||||||||||||||||    
T  3664 cgggaataaaatttagtaaacttgtaacaaacataggcatatatatttttataattttattcctagaaatctacaaatataacttgaaacaaaca 3570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4440 - 4534
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | || ||||||||||||||||||||||||||    
T  4440 cgggaataaaatttagtaaacttgtaacaaacataggcatatatatttttataattttattcctagaaatctacaaatataacttgaaacaaaca 4534  T

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Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 25455004 - 25455090
Alignment:
Q  9 aaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||||||||||||||||||    
T  25455004 aaatttagtaaacttgtaacaaacatagacatatgtatttttatgattttattctcaggaatctacaaatataacttgaaacaaaca 25455090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45694160 - 45694253
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||| || ||||| |||||||||||||||||||    
T  45694160 cgggaataaaatttagtaaacttgtaacaaacatagacatgtgtattcctatcattttattcccagaaatctacgaatataacttgaaacaaac 45694253  T

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Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18713756 - 18713662
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||| |||  | || |||||||||||||||||||||||    
T  18713756 cgggaataaaatttagtaaacttgtaacaaacataggcatatatatttatatcattttattaccatgaatcaacaaatataacttgaaacaaaca 18713662  T

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Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 39819676 - 39819762
Alignment:
Q  9 aaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||||  ||  | ||||||||||||||||||||||||||    
T  39819676 aaatttagtaaacttgtaacaaacataggcatatgtattttcatgattttattttcaggaatctacaaatataacttgaaacaaaca 39819762  T

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Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14253494 - 14253578
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataactt 85  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| | | || |||||||||||||    
T  14253494 cgggaataaaatttagtaaacttgtaacaaacatagacatatatatttctatcattttattcccgagaatcaacaaatataactt 14253578  T

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Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 1988288 - 1988377
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| |||||||||||||||||||| ||| | ||||| ||| |||||||||||| || || ||||||||||||| |||||||||    
T  1988288 ataaaatttaataaacttgtaacaaacataggcatgtatatttctatcattttattcccagaaatcaacaaatataacttcaaacaaaca 1988377  T

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Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5770209 - 5770112
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatac 98  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| ||||||||||||  | || |||| |||||||||||||||||||||    
T  5770209 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaacatac 5770112  T

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Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 14832787 - 14832876
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||| |||||||||||| ||||| ||||| ||| |||||||||| |  | || |||||||||||||||||||||||    
T  14832787 ataaaatttagtaaacttttaacaaacataggcatatatatttctatcattttattcctaggaatcaacaaatataacttgaaacaaaca 14832876  T

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Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 37533929 - 37534018
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||  || || |||| ||||||||||||||||||    
T  37533929 ataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 37534018  T

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Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 4875752 - 4875840
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||||||| |||||||||||||||||| ||| || ||||| ||| |||||||| ||||||  ||||||||||||||| ||||||||    
T  4875752 ataaaatttagcaaacttgtaacaaacataaacaaatttatttctatcattttatttccaaaaagctacaaatataacttaaaacaaac 4875840  T

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Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 11071577 - 11071684
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatacgc 100  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||  || || |||| |||||||||||||||||| || |    
T  11071577 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccc 11071676  T
Q  101 ataagaaa 108  Q
     |||||||    
T  11071677 ttaagaaa 11071684  T

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Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28311796 - 28311702
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||| |||||||||||||||||||||| ||||| ||||  ||| |||||||||||   | || |||||||||||||||||||||||    
T  28311796 cgggaataaaattcagtaaacttgtaacaaacataggcatatatattcctatcattttattcccgggaatcaacaaatataacttgaaacaaaca 28311702  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 37233401 - 37233495
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| ||||| | ||  ||| |||||||||||   | || |||||||||||||||||||||||    
T  37233401 cgggaataaaatttagtaaacttgtaacaaacataggcatatatgttcctatcattttattcccgggaatcaacaaatataacttgaaacaaaca 37233495  T

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Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40569992 - 40570086
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||  ||||||||||||||||||| ||| | | ||||||| ||||||||||||  | ||||||| ||||||||||||||||||    
T  40569992 cgggaataaaatttaacaaacttgtaacaaacataggcatgtatgtttttatgattttattcccaggaatctacaattataacttgaaacaaaca 40570086  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 21737494 - 21737405
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  21737494 ataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 21737405  T

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Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 40950953 - 40950864
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||  ||||| ||||| ||| ||||||||||| | | || |||| ||||||||||||||||||    
T  40950953 ataaattttagtaaacttgtaacaaacataagcatatatatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 40950864  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 6571664 - 6571751
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaa 93  Q
    ||||||||||||||||||||||||||||||| ||||| ||||  ||| |||||||| ||  || || ||||||||||||| |||||||    
T  6571664 ataaaatttagtaaacttgtaacaaacataggcatatatattcctatcattttatttccggaaatcaacaaatataactttaaacaaa 6571751  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 20426582 - 20426488
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||||||||| ||||||||||||    
T  20426582 cggggataaaatttagtaaacttgtaacaaacataggcatataaattcctatcattttattcccgggaatcaacaaatataatttgaaacaaaca 20426488  T

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Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34356799 - 34356705
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||| || |||||||||||||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  34356799 cgggaataaaatttagtaaacttataccaaacatagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 34356705  T

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Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 638570 - 638659
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||| ||||||||||||||||||||  |||  ||| |||||||| ||  || || |||| ||||||||||||||||||    
T  638570 ataaaatttagtaaacctgtaacaaacatagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaaca 638659  T

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Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 9733940 - 9733851
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  9733940 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 9733851  T

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Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 37192499 - 37192588
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||| ||||||||||||||||||||||||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  37192499 ataaattttaataaacttgtaacaaacatagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 37192588  T

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Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 39995225 - 39995136
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  39995225 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 39995136  T

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Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 41750506 - 41750595
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||| |  | || |||| ||||||||||||||||||    
T  41750506 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaaca 41750595  T

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Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 11763465 - 11763382
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaa 89  Q
    ||||||||||||||| || |||||||||||||||||| ||||  ||| |||| |||||| |||  | |||||||||||||||||    
T  11763465 ataaaatttagtaaatttataacaaacatagacatatatattcctatcatttcattcccgaaaaacaacaaatataacttgaaa 11763382  T

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Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 346444 - 346350
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||| |||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  346444 cgggaataaaatttaataaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 346350  T

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Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6171763 - 6171857
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| ||||||||| |   | || |||| ||||||||||||||||||    
T  6171763 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaaca 6171857  T

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Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 24499419 - 24499506
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||| ||||||||||||  |||| ||||| ||| |||||||| | |  | || |||||||||||||||||||||||    
T  24499419 ataaaatttagtaaacttataacaaacatag--atatatatttctatcattttatttctatgaatcaacaaatataacttgaaacaaaca 24499506  T

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Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 42674760 - 42674666
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  42674760 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 42674666  T

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Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 27358057 - 27357968
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||||||||||  ||   ||| ||||||| ||    | || |||||||||||||||||||||||    
T  27358057 ataaaatttagtaaacttgtaacaaacatagacatatacatccctatcattttatacctgggaatcaacaaatataacttgaaacaaaca 27357968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 5002931 - 5002843
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||||||| |||||||||||||| |||  ||| | || || ||| |||||||||  | || |||||||||||||||||||||||||    
T  5002931 ataaaatttagcaaacttgtaacaaatatatgcatgtatacttctatcattttattcttagaaatctacaaatataacttgaaacaaac 5002843  T

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Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 7007551 - 7007639
Alignment:
Q  7 taaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||  |||||| |||| || |||||  || ||||||| ||||| | || ||||||||||||||||| |||||    
T  7007551 taaaatttagtaaacttgtatgaaacattgacaaatatatttccatcattttatccccaagaatcaacaaatataacttgaaataaaca 7007639  T

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Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 13539645 - 13539733
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||| |||| |||||||||||||||||||   ||| | |||  |||||||||||||| |||||| | ||||||||||| ||||    
T  13539645 ataaaatttaataaatttgtaacaaacatagacatgcatatgtctattgttttattcccaaaaatctacatagataacttgaaataaac 13539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2050838 - 2050932
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||  ||||  |||  ||| ||||||||| |   | || |||| ||||||||||||||||||    
T  2050838 cgggaataaaatttagtaaacttgtaacaaacataggtatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaaca 2050932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14777597 - 14777503
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||| ||||||||||||    
T  14777597 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataaattgaaacaaaca 14777503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 41729224 - 41729166
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattccc 64  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||    
T  41729224 ataaaatttagtaaacttgtaacaaacataggcatatccattcctatcattttattccc 41729166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 4685156 - 4685245
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| |||| || ||||||||||| |||| | ||||| ||| |||||||| |||||| | | | ||||| ||||||||||||||    
T  4685156 ataaaatttaataaatttataacaaacataaacatgtatatttctatcattttatttccaaaaatatgcgaatatcacttgaaacaaaca 4685245  T

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Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17965955 - 17965996
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  17965955 cgggaataaaatttggtaaacttgtaacaaacatagacatat 17965996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 2521652 - 2521688
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    ||||||||||||||||||||||||||||||| |||||    
T  2521652 ataaaatttagtaaacttgtaacaaacataggcatat 2521688  T

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Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 3902433 - 3902521
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||||||||||||||||||||||||||    ||| ||||| ||| ||||||||| ||  |    ||||||||||||||||||||||    
T  3902433 ataaaatttagtaaacttgtaacaaacatatgtctatatatttctatcattttattctcaggaaagaacaaatataacttgaaacaaac 3902521  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 1723322 - 1723233
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| |||||||||||||||||| || || | |||||  || |||||||||    || | |||||| |||||||||||||||||    
T  1723322 ataaaatttaataaacttgtaacaaacattgaaatgtatatttccatcattttattcatggaaatatacaaacataacttgaaacaaaca 1723233  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 14403327 - 14403238
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| ||||||||||| |||  ||| ||| | ||||||||| |||||||| |||  | || ||||||| ||||| |||||||||    
T  14403327 ataaaatttattaaacttgtaataaatgtaggcatgtatatttttatcattttatttccaggaatcaacaaatacaacttcaaacaaaca 14403238  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 45409227 - 45409316
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||| |||||||| |||||  |||  ||| ||||||| |     | || |||||||||||||||||||||||    
T  45409227 ataaaatttagtaaacttgtaaaaaacataggcatatacattcctatcattttatacttgggaatcaacaaatataacttgaaacaaaca 45409316  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 8868757 - 8868670
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||| ||| | |||||||||||||   |||||||||| ||| | |||||||| |  | |||||||| ||||||||||||||||    
T  8868757 ataaaatttactaatcctgtaacaaacataagaatatgtatttctatcaatttattcctaggaatctacaaa-ataacttgaaacaaac 8868670  T

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Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 10400899 - 10400807
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatac 98  Q
    |||||||||||||||||||||| ||||||||||||||  |||| ||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  10400899 ataaaatttagtaaacttgtaataaacatagacatatacatttctatcattttattcccaaaaatcaacaaatataacttgaaacaaacatac 10400807  T

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Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 26165345 - 26165434
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||| |||| || |||||||| ||||||||| ||  | |||||||||||||| |||||||||||    
T  26165345 ataaaatttagtaaacttgtaacaaacataaacatgtgcatttttatgattttattctcaggaatctacaaatataacatgaaacaaaca 26165434  T

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Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 27555391 - 27555480
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||| ||||||||||| | | || |||| ||||||||||||||||||    
T  27555391 ataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaaca 27555480  T

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Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 45596249 - 45596337
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| ||||||||||| ||| || |||| |||||||||||||||||    
T  45596249 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgaaaatcaacaattataacttgaaacaaac 45596337  T

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Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6280020 - 6279926
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  6280020 cgggaataaaatttagtaaacttgtaacaaacatagacatatacattcatatcattttattcccgggaatcaacaattataacttgaaacaaaca 6279926  T

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Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 18931729 - 18931823
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||| || |||||||||||||||  |||  ||| |||||||||||| || || |||| ||||||||||||||||||    
T  18931729 cgggaataaaatttagtaaacttataccaaacatagacatatacattcctatcattttattcccagaaatcaacaattataacttgaaacaaaca 18931823  T

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Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42773924 - 42774018
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||| || || |||| ||||||||||||||||||    
T  42773924 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaaca 42774018  T

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Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 23686768 - 23686857
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  23686768 ataaattttagtaaacttgtaacaaacataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 23686857  T

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Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 35999667 - 35999756
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| ||||||||||| | | || |||| ||||||||||||||||||    
T  35999667 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 35999756  T

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Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 8322226 - 8322308
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaa 88  Q
    ||||| |||||||||||||||||||||||||||||||  |||| ||| ||||||||||||  | || |||| |||||||||||    
T  8322226 ataaattttagtaaacttgtaacaaacatagacatatacatttctatcattttattcccaggaatcaacaattataacttgaa 8322308  T

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Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 34049691 - 34049593
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatacgcataa 104  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||| ||   | || |||| |||||||||||||||||| || |||||    
T  34049691 ataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaacacacccataa 34049593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 39730392 - 39730298
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||   | || | || ||||||||||||||||||    
T  39730392 cgggaataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaaca 39730298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 45747895 - 45747801
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  45747895 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 45747801  T

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Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 18405328 - 18405239
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||||||||||||| |   | || |||| ||||||||||||||||||    
T  18405328 ataaattttagtaaacttgtaacaaacataggcatatacatttctataattttattctcgggaatcaacaattataacttgaaacaaaca 18405239  T

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Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 24805179 - 24805090
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||| |||||||||||||| |||| | ||||||| |  |||||||| || || ||||| || |||||||||||||||||    
T  24805179 ataaaatttagtaaatttgtaacaaacataaacatgtatatttttttcgttttattctcagaaatctacgaaaataacttgaaacaaaca 24805090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 25932422 - 25932511
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||| |  | || |||| ||||||||||||||||||    
T  25932422 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaaca 25932511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 30415883 - 30415972
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||| |||||||| ||||  ||| ||||||||  |   | || |||||||||||||||||||||||    
T  30415883 ataaaatttagtaaacttgtaacaaacacagacatatatattcctatcattttattatcgggaatcaacaaatataacttgaaacaaaca 30415972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 31937963 - 31937874
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| ||||||| |||||||||||  ||| | | ||||||| ||||||||  ||||| ||||||| ||||||||||||||||||    
T  31937963 ataaaatttaataaacttctaacaaacatatgcatgtatgtttttatgattttattttcaaaaatctacaattataacttgaaacaaaca 31937874  T

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Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 40435881 - 40435970
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  40435881 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 40435970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 41744314 - 41744225
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||  || || |||| |||||||||||| |||||    
T  41744314 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaataaaca 41744225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 47670343 - 47670432
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||| |||  | || |||| ||||||||||||||||||    
T  47670343 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttatttccaggaatcaacaattataacttgaaacaaaca 47670432  T

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Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 48879306 - 48879395
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  48879306 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 48879395  T

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Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 51968758 - 51968847
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||| ||||||||||||||||||| |||   ||||| |||  ||||||||||| || | ||| ||||||||||||||||||||    
T  51968758 ataaaatttagcaaacttgtaacaaacataggcatgcatatttctatctttttattcccagaaatttacgaatataacttgaaacaaaca 51968847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 44309741 - 44309829
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||||||| ||||||||||||||||||||   ||||| |||  |||||||  || || ||||| |||||||||||||||||||    
T  44309741 ataaaatttagtaaccttgtaacaaacatagacatgcatatttctatcgttttattttcagaaatctacgaatataacttgaaacaaac 44309829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13230088 - 13230025
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattccc 64  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||| ||| |||||||||||    
T  13230088 cgggaataaaatttagtaaacttgtaacaaacataggcatatacatttctatcattttattccc 13230025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 27762998 - 27762904
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  27762998 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 27762904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 36860106 - 36860187
Alignment:
Q  13 ttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||| |||||| ||||| ||| ||||||||   | || || |||||||||||||||||||||||    
T  36860106 ttagtaaacttgtaacaaacataaacatatatatttatatcattttatt-taagaaatcaacaaatataacttgaaacaaaca 36860187  T

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Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 38414187 - 38414274
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||| | |||||||||||||| | ||||| ||| ||||||||||| ||  || ||||||||||||| | |||||||    
T  38414187 ataaaatttagtaaacttattacaaacatagacatgtatatttctatcattttattcccgaa--tcaacaaatataactttagacaaaca 38414274  T

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Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 50672999 - 50672941
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattccc 64  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||    
T  50672999 ataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattccc 50672941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 55968099 - 55968005
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||| ||||||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  55968099 cgggaataaaatttagtaaacttgtaacaaacagagacatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 55968005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 39498806 - 39498895
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||| ||||||  |||| ||| |||||||| ||   | || |||| ||||||||||||||||||    
T  39498806 ataaattttagtaaacttgtaacaaacataaacatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaaca 39498895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 39502145 - 39502234
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||| ||||||  |||| ||| |||||||| ||   | || |||| ||||||||||||||||||    
T  39502145 ataaattttagtaaacttgtaacaaacataaacatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaaca 39502234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 39835401 - 39835312
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||  |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  39835401 ataaattttagtaaacttgtaacaaacatatgcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaaca 39835312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 48518985 - 48518896
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || | || ||||||||||||||||||    
T  48518985 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaaca 48518896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 7258944 - 7259031
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||||||||||||||||||||| |||||| | || || ||| |||||||||  |  | ||||| |||||||||||||||||||    
T  7258944 ataaaatttagtaaacttgtaacaaacaaagacatgtata-ttctatcattttattctaaggaatctaccaatataacttgaaacaaac 7259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 12276005 - 12275953
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataatttt 58  Q
    |||||||||||||||||||||||||||||| |||||| ||||| ||| |||||    
T  12276005 ataaaatttagtaaacttgtaacaaacataaacatatatatttctatcatttt 12275953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 47426335 - 47426299
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    |||||||||||||||||||||||||||||||||||||    
T  47426335 ataaaatttagtaaacttgtaacaaacatagacatat 47426299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 52469679 - 52469734
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttatt 61  Q
    |||||||||| ||||||||||||||||||||||||||| | || ||| ||||||||    
T  52469679 ataaaatttaataaacttgtaacaaacatagacatatgcaattctatcattttatt 52469734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 936102 - 936196
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||  |||| ||||   || ||||||||| |   | || |||| ||||||||||||||||||    
T  936102 cgggaataaaatttagtaaacttgtaacaaacatagggatatatattccaatcattttattctcgggaatcaacaattataacttgaaacaaaca 936196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 30790518 - 30790568
Alignment:
Q  28 caaacatagacatatgtatttttataattttattcccaaaagtctacaaat 78  Q
    ||||||||||||||||||||||||| ||||||||| ||| | |||||||||    
T  30790518 caaacatagacatatgtatttttatgattttattcgcaagaatctacaaat 30790568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 36858475 - 36858441
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacata 35  Q
    |||||||||||||||||||||||||||||||||||    
T  36858475 cgggcataaaatttagtaaacttgtaacaaacata 36858441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 41859141 - 41859052
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||  |||||||||||||||||||||| |||||  |||   || |||||||||||  || || |||| ||||||||||||||||||    
T  41859141 ataaaataaagtaaacttgtaacaaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaaca 41859052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 43723245 - 43723334
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| ||||||||  |   | || |||| ||||||||||||||||||    
T  43723245 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaaca 43723334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25916132 - 25916092
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacata 41  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  25916132 cgggaataaaatttagtaaacttgtaacaaacataggcata 25916092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 18405734 - 18405823
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||| |||||||||||||||||||||| || | ||||| |||  |||||||| |  || |||   |||||||||| |||||||||    
T  18405734 ataaaattttgtaaacttgtaacaaacatagatatgtatatttatatcgttttattctcggaaatctctgaatataacttaaaacaaaca 18405823  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 38394887 - 38394916
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacata 35  Q
    ||||||||||||||||||||||||||||||    
T  38394887 ataaaatttagtaaacttgtaacaaacata 38394916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 9297172 - 9297144
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacat 34  Q
    |||||||||||||||||||||||||||||    
T  9297172 ataaaatttagtaaacttgtaacaaacat 9297144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 9327340 - 9327284
Alignment:
Q  6 ataaaatttagtaaacttgtaa-caaacatagacatatgtatttttataattttatt 61  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||| ||  ||||||||    
T  9327340 ataaaatttagtaaacttataaacaaacatagacatatatatttctaacattttatt 9327284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 9374099 - 9374043
Alignment:
Q  6 ataaaatttagtaaacttgtaa-caaacatagacatatgtatttttataattttatt 61  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||| ||  ||||||||    
T  9374099 ataaaatttagtaaacttataaacaaacatagacatatatatttctaacattttatt 9374043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 32953504 - 32953540
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    |||||||||||||||||||||||||| |||| |||||    
T  32953504 ataaaatttagtaaacttgtaacaaagataggcatat 32953540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 34238048 - 34238012
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  34238048 ataaattttagtaaacttgtaacaaacataggcatat 34238012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12931040 - 12930947
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||| | ||||| ||||||||||||||||||||    
T  12931040 cgggaataaaatttagtaaacttgtaacaaacatagccatatgcatttttatgattttattcccaacaatctac-aatataacttgaaacaaaca 12930947  T

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Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 24784184 - 24784271
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||||    
T  24784184 ataaaatttagtaaacttgtaacaaact--gacatatgtatttttataattttattccaaaaaatctacaattataacttaaaacaaaca 24784271  T

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Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 6832050 - 6831962
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| | |||||||| |||  | ||||||||||||| ||||||||||||    
T  6832050 ataaaatttagtaaacttgtaacaaacatagacatgtgt-tttttgtgattttatttccaggaatctacaaatataagttgaaacaaaca 6831962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 31436017 - 31435928
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||| ||| ||||||||| ||  | || |||||||||||||||||||||||    
T  31436017 ataaaatttagtaaacttgtaacaaacataggcatatacatttctatcattttattctcaggaatcaacaaatataacttgaaacaaaca 31435928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 40584577 - 40584664
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaa 93  Q
    |||||||||| ||||||||||  ||||||||||||||| |||||||| ||||||||| ||  | |||||||||||||||| |||||||    
T  40584577 ataaaatttaataaacttgtagaaaacatagacatatgcatttttatgattttattctcaggaatctacaaatataacttaaaacaaa 40584664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27823246 - 27823340
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||| || ||||||||||||| | ||||| ||| |||||||||||| || | ||  ||||||||||||||||||||    
T  27823246 cgggaataaaatttagtaaacttatagcaaacatagacatttatatttctatcattttattcccataaatttatgaatataacttgaaacaaaca 27823340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 43132251 - 43132162
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| |||||||||||||||||||| ||||| ||||  ||| ||||||||| | | | || |||||||||||||||||||||||    
T  43132251 ataaaatttaataaacttgtaacaaacataggcatatatattcctattattttattctcgagaatcaacaaatataacttgaaacaaaca 43132162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 48339851 - 48339762
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||  || || |||| ||||||||||||||||||    
T  48339851 ataaattttagtaaacttgtaacaaacataggcatatacatttatatcattttattcccggaaatcaacaattataacttgaaacaaaca 48339762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 1246996 - 1246912
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaac 90  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||| | | || ||||||||| ||| ||||    
T  1246996 ataaaatttagtaaacttgtaacaaacataagcatatgtatttctatcattttattcccgagaatcaacaaatatagcttcaaac 1246912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 13643060 - 13643122
Alignment:
Q  19 aacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatata 81  Q
    |||||||||||||||||||||||||||||||||| ||||||||  || || ||||||||||||    
T  13643060 aacttgtaacaaacatagacatatgtatttttatgattttattatcagaaatctacaaatata 13643122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26848994 - 26849088
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  26848994 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 26849088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28124535 - 28124441
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||| |||||||||||| |||||  |||  ||| ||||||||||| | | || |||| ||||||||||||||||||    
T  28124535 cgggaataaaatttagtaaacttataacaaacataggcatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaaca 28124441  T

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Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40908237 - 40908331
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  40908237 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 40908331  T

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Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47114956 - 47114862
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || ||||||||||||  | || |||| ||||||||||||||||||    
T  47114956 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaaca 47114862  T

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Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 11239214 - 11239125
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  11239214 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 11239125  T

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Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 24574552 - 24574641
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  24574552 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 24574641  T

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Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 33647797 - 33647708
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||||| || | ||||| ||   |||||||||| | | ||||| ||||| ||||||||||||||    
T  33647797 ataaaatttagtaaacttgtaacaaacatagagatgtatatttctaacgttttattcccgagaatctacgaatattacttgaaacaaaca 33647708  T

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Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 44952285 - 44952374
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  44952285 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 44952374  T

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Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6231600 - 6231506
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| ||||||||| |   | || |||| ||||||||||||||||||    
T  6231600 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaaca 6231506  T

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Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 20414564 - 20414470
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||| || |||||||||||| |||||  |||   || |||||||||||| || || |||| ||||||||||||||||||    
T  20414564 cgggaataaaatttagtaaatttataacaaacataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaaca 20414470  T

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Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 28770301 - 28770215
Alignment:
Q  9 aaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||| |||||||||||||   ||||| |||  |||||||||||  | ||||| |||||||||||||| |||||    
T  28770301 aaatttagtaaacttgtaccaaacatagacatgcatatttctatctttttattcccaggaatctacgaatataacttgaaagaaaca 28770215  T

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Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33218012 - 33217918
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||| |||| ||||||||||||||| |||||  |||  ||| |||||||||||  || || |||| ||||||||||||||||||    
T  33218012 cgggaataaaatttaataaatttgtaacaaacataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 33217918  T

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Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 10822806 - 10822733
Alignment:
Q  12 tttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataactt 85  Q
    |||||||||||||||||||||||||||||||  | || ||| |||||||||||  || || |||||||||||||    
T  10822806 tttagtaaacttgtaacaaacatagacatatacacttctatcattttattcccggaaatcaacaaatataactt 10822733  T

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Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31611084 - 31611043
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  31611084 cgggaataaaatttagtaaacttgtaacaaacatagacatat 31611043  T

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Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 12228350 - 12228294
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattc 62  Q
    |||||||||||||||||||||| |||||||| ||||| ||||| ||| |||||||||    
T  12228350 ataaaatttagtaaacttgtaataaacataggcatatatatttctatcattttattc 12228294  T

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Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 18460916 - 18460952
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    |||||||||||||||||||||||||||||||||||||    
T  18460916 ataaaatttagtaaacttgtaacaaacatagacatat 18460952  T

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Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 39932624 - 39932529
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgt--atttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| |||||||||||||||||| ||||||||||| |||||| |  |||| ||| ||||||||||||  | | ||  |||||||||||||||||||    
T  39932624 cgggaataaaatttagtaaacttataacaaacataaacatatatacatttctatcattttattcccatgaatttatgaatataacttgaaacaaac 39932529  T

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Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8476407 - 8476313
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||| || |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  8476407 cgggaataaaatttagtaaacttgtaacaaacacaggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 8476313  T

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Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9320547 - 9320453
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||   ||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  9320547 cgggaataaaatttagtaaacttgtaacaaacataagtatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 9320453  T

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Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 26849240 - 26849194
Alignment:
Q  15 agtaaacttgtaacaaacatagacatatgtatttttataattttatt 61  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  26849240 agtaaacttgtaacaaacatagacatatatatttctatcattttatt 26849194  T

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Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 1099175 - 1099264
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||||  ||||  |||| ||| |||||||||||   | || |||| |||||||| |||||||||    
T  1099175 ataaattttagtaaacttgtaacaaacatagggatatacatttctatcattttattcccgggaatcaacaattataacttaaaacaaaca 1099264  T

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Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 20297770 - 20297859
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||| |||||||||||||||||||| |||||  |||| ||| |||||||| ||   | || |||| ||||||||||||||||||    
T  20297770 ataaattttaataaacttgtaacaaacataggcatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaaca 20297859  T

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Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 28139814 - 28139726
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||| ||| |||||||||||||||  ||| | ||||| |||  ||||||||| || | | ||| |||||||||||||||||||    
T  28139814 ataaaatttactaatcttgtaacaaacataagcatgtatatttctatctttttattcctaagaatatacgaatataacttgaaacaaac 28139726  T

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Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53165824 - 53165764
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttatt 61  Q
    |||| ||||||||||||||||||||||||||||||  ||||| ||||  ||| ||||||||    
T  53165824 cgggaataaaatttagtaaacttgtaacaaacataagcatatatattcctatcattttatt 53165764  T

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Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 46359924 - 46359959
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatag 36  Q
    |||| |||||||||||||||||||||||||||||||    
T  46359924 cgggaataaaatttagtaaacttgtaacaaacatag 46359959  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 2565551 - 2565465
Alignment:
Q  9 aaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||  |||||||||||||||| ||  |||| ||||| ||| |||||||||| || | || ||||||||||||| |||| ||||    
T  2565551 aaatttaacaaacttgtaacaaacacaggtatatatatttctattattttattcctaagaatcaacaaatataacttaaaacgaaca 2565465  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 32071421 - 32071450
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacata 35  Q
    ||||||||||||||||||||||||||||||    
T  32071421 ataaaatttagtaaacttgtaacaaacata 32071450  T

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Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 13931978 - 13931889
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |  | |||||||||||||||| |||||||||    
T  13931978 ataaaatttagtaaacttgtaacaaacataggcatatgtatttttatgattttattcctaggaatctacaaatataacttcaaacaaaca 13931889  T

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Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 29091644 - 29091733
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  ||  | || |||||||||||||||||||||||    
T  29091644 ataaaatttagtaaacttgtaacaaacatagacatatatatttttatcattttattatcaggaatcaacaaatataacttgaaacaaaca 29091733  T

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Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30240982 - 30241075
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| |||||||||| |||||||||||||||||||| ||||| ||||| ||| |||||||| |||||| || ||||||||||||||||||||||    
T  30240982 cgggaataaaatttaataaacttgtaacaaacataggcatatatatttctatcattttattaccaaaaatcaacaaatataacttgaaacaaac 30241075  T

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Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 19083199 - 19083110
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||| |||||||||||||||| | ||||| ||| ||| ||||||||||| ||||| ||||||| ||||||||||||    
T  19083199 ataaaatttagtaaacttataacaaacatagacatgtatatttctatcattgtattcccaaaaatctacgaatataatttgaaacaaaca 19083110  T

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Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 19131087 - 19130998
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||| |||||||||||||||| | ||||| ||| ||| ||||||||||| ||||| ||||||| ||||||||||||    
T  19131087 ataaaatttagtaaacttataacaaacatagacatgtatatttctatcattgtattcccaaaaatctacgaatataatttgaaacaaaca 19130998  T

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Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 38519156 - 38519067
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||  ||| ||||||| |||   |||||| |||||| ||||||||||||||||||||||||||    
T  38519156 ataaaatttagtaaacttgtaacaaacataagcatctgtatttctattgatttatttccaaaaatctacaaatataacttgaaacaaaca 38519067  T

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Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 20505083 - 20504995
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||| || || ||||||||||||| || ||||||||    
T  20505083 ataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcattttattctcagaaatctacaaatataatttaaaacaaac 20504995  T

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Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5518603 - 5518509
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||    | || |||||||||||||||||||||||    
T  5518603 cgggaataaaatttagtaaacttgtaacaaacataggcatatatatttctatcattttattcctgggaatcaacaaatataacttgaaacaaaca 5518509  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 52186145 - 52186051
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||   | || || |||||||||||||||||||||||    
T  52186145 cgggaataaaatttagtaaacttgtaacaaatatagacatatatatttctatcattttattataagaaatcaacaaatataacttgaaacaaaca 52186051  T

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Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6911471 - 6911560
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  ||| |||| ||||||||||| | | || |||| ||||||||||||||||||    
T  6911471 ataaaatttagtaaacttgtaacaaacataggcatatacattcttatcattttattcccgagaatcaacaattataacttgaaacaaaca 6911560  T

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Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 52630751 - 52630840
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||| ||||||||||||  | || |||| ||||||||||||||||||    
T  52630751 ataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaaca 52630840  T

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Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 52699565 - 52699472
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| |||||||| |||||||||||||||||||||| ||| ||||||  ||| ||||||||||||  | ||||| |||||||||||||||||||    
T  52699565 cgggaataaaattcagtaaacttgtaacaaacataggcatgtgtattcctatcattttattcccaggaatctacgaatataacttgaaacaaac 52699472  T

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Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 11014531 - 11014448
Alignment:
Q  10 aatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaa 93  Q
    |||||| |||||||||||||||||||||||| | ||||| ||| ||||||||||||  | |||||| |||||||||||||||||    
T  11014531 aatttattaaacttgtaacaaacatagacatgtatatttctatcattttattcccaggaatctacatatataacttgaaacaaa 11014448  T

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Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 49823009 - 49822922
Alignment:
Q  8 aaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||| |||||  |||| ||| ||||||||||| | | || |||| ||||||||||||||||||    
T  49823009 aaaatttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 49822922  T

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Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1007720 - 1007814
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||||  ||| ||||||||| |   | || |||||||||||||||||||||||    
T  1007720 cgggaataaaatttagtaaacttgtaacaaacctagacatatatattcatatcattttattctcgggaatcaacaaatataacttgaaacaaaca 1007814  T

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Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 1597441 - 1597347
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||  || || |||| ||||||||||||||||||    
T  1597441 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 1597347  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12190276 - 12190182
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| ||| |  |||  ||| ||||||||||| ||| || |||| ||||||||||||||||||    
T  12190276 cgggaataaaatttagtaaacttgtaacaaacataggcatgtacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaaca 12190182  T

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Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 13521299 - 13521387
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||| |||||| | ||||| ||| ||| || |||||||| ||||||||||||| | ||||||||||    
T  13521299 ataaaatttagtaaacttgtaacaaacacagacatgtatatttctatcattgta-tcccaaaaatctacaaatataattagaaacaaaca 13521387  T

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Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13653824 - 13653917
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| ||||||||||||||||||||||||||| || |||||| ||||| ||| ||||||||| ||  | || |||||| |||||||||||||||    
T  13653824 cgggaataaaatttagtaaacttgtaacaaacgtatacatatatatttctatcattttattctcaggaatcaacaaatttaacttgaaacaaac 13653917  T

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Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 47037435 - 47037524
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  47037435 ataaattttagtaaacttgtaacaaacataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 47037524  T

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Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 9011255 - 9011167
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||||||||||||||| |||||||||||| | ||||  ||| ||||||||  ||| | ||||| |||||||||||||||||||    
T  9011255 ataaaatttagtaaacttgtaataaacatagacatgtatattcctatcattttattttcaagaatctacgaatataacttgaaacaaac 9011167  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 1227972 - 1227893
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataactt 85  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||  ||| | ||||| ||||||||||    
T  1227972 ataaaatttaataaacttgtaacaagcataggcatatgtatttttatgattttattttcaagaatctacgaatataactt 1227893  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20260185 - 20260082
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatacgc 100  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || ||||||||||||  | || |||| |||||||||||||||||| || |    
T  20260185 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaacacaccc 20260086  T
Q  101 ataa 104  Q
    ||||    
T  20260085 ataa 20260082  T

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Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2430469 - 2430563
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  2430469 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 2430563  T

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Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39329581 - 39329675
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  39329581 cgggaataaaatttagtaaacttgtaacaaacatagacatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 39329675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 46960600 - 46960658
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataatttta 59  Q
    |||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  46960600 cgggaataaaatttagtaaacttgtaacaaacataggcatatgcatttttatgatttta 46960658  T

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Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6978748 - 6978837
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  6978748 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 6978837  T

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Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 9115815 - 9115904
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  9115815 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 9115904  T

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Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 16257102 - 16257013
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| ||||||||||| |||||| || || | ||||||||| |||||||||| | || | |||||||||||||| |||||||||    
T  16257102 ataaaatttaataaacttgtaaaaaacattgaaatgtatatttttatgattttattccaagaaatatacaaatataacttcaaacaaaca 16257013  T

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Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 25789741 - 25789830
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  25789741 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 25789830  T

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Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 32824900 - 32824989
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||| ||  || || |||| ||||||||||||||||||    
T  32824900 ataaaatttagtaaacttgtaacaaacataggcatatacattcctattattttatttccggaaatcaacaattataacttgaaacaaaca 32824989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 36361760 - 36361849
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  36361760 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 36361849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 39930435 - 39930524
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  39930435 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 39930524  T

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Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 47677621 - 47677709
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||| || ||||||||| | |||||||||||||||| |||||||||||  || || |||||||||||  ||||||||||    
T  47677621 ataaaatttagtaaatttataacaaacacaaacatatgtatttttatgattttattcccggaa-tccacaaatataacgggaaacaaaca 47677709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 48916116 - 48916027
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||| ||| ||||||||| |   | || ||||||||||||||||| |||||    
T  48916116 ataaaatttagtaaacttgtaacaaacataggcatatacatttctatcattttattctctggaatcaacaaatataacttgaaataaaca 48916027  T

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Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24116434 - 24116342
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||| ||||||||| |||||  ||||| |||  |||||||| ||  | |||||||||||||| |||||||||||    
T  24116434 cgggaataaaatttagtaaacttgtgacaaacataaacata--tatttctatcgttttattctcaggaatctacaaatataacctgaaacaaaca 24116342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2632825 - 2632919
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||| |||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  2632825 cgggaataaaatttaataaacttgtaacaaacataggcatatacattcctattattttattcccgggaatcaacaattataacttgaaacaaaca 2632919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3572664 - 3572570
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||| |||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  3572664 cgggaataaaatttaataaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 3572570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8331987 - 8332081
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||| ||||||||||| |||||  |||   || |||||||||||  || || |||| ||||||||||||||||||    
T  8331987 cgggaataaaatttagtaaacttgcaacaaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaaca 8332081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 13440373 - 13440455
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaa 88  Q
    ||||||||||||||| || |||||||||||| ||| | ||||| ||| ||| ||||||||||| ||||| ||||||| |||||    
T  13440373 ataaaatttagtaaaattctaacaaacatagtcatttatatttctatcattgtattcccaaaaatctacgaatataatttgaa 13440455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 14788696 - 14788790
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||| |||||||||||||||||||||||||||||||||  |||  ||| |||||||||||   | || | || ||||||||||||||||||    
T  14788696 cgggaatataatttagtaaacttgtaacaaacatagacatatacattcctattattttattcccgggaatcaaaaattataacttgaaacaaaca 14788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 31806848 - 31806761
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||  ||||||||||||  ||| | ||||| ||| ||||||||| ||  | ||||||||||||||||||||||||||    
T  31806848 ataaaatttagtaaac--gtaacaaacataagcatgtatatttctatcattttattctcaggaatctacaaatataacttgaaacaaaca 31806761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 46666681 - 46666775
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  46666681 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 46666775  T

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Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 9831964 - 9831875
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| ||||||||||    | || |||| ||||||||||||||||||    
T  9831964 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaaca 9831875  T

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Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 35187434 - 35187523
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||| ||||||  |||| ||| |||||||||||   | || |||| |||||||||||| |||||    
T  35187434 ataaattttagtaaacttgtaacaaacataaacatatacatttctatcattttattcccgggaatcaacaattataacttgaaaaaaaca 35187523  T

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Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37261820 - 37261913
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| |||||||||| |||||||||||||||||||  ||| | ||||| ||||||||||||| ||  | ||||  ||||||| |||||||||||    
T  37261820 cgggaataaaatttaataaacttgtaacaaacatatgcatgtatatttctataattttattctcaggaatctatgaatataatttgaaacaaac 37261913  T

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Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 51445174 - 51445085
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||||  ||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  51445174 ataaattttagtaaacttgtaacaaacataggtatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaaca 51445085  T

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Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 38964773 - 38964684
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||| ||||||||||||||||||||  |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  38964773 ataaatttttgtaaacttgtaacaaacataagcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 38964684  T

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Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17475420 - 17475360
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttatt 61  Q
    |||| |||||||||||||||||| ||||||||||| |||||| ||||| |||  |||||||    
T  17475420 cgggaataaaatttagtaaacttataacaaacataaacatatatatttctatcgttttatt 17475360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4683473 - 4683432
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    |||| ||||||||||||||| ||||||||||||||| |||||    
T  4683473 cgggaataaaatttagtaaatttgtaacaaacataggcatat 4683432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 37436715 - 37436686
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacata 35  Q
    ||||||||||||||||||||||||||||||    
T  37436715 ataaaatttagtaaacttgtaacaaacata 37436686  T

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Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50190864 - 50190823
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    |||| ||||||||||||||||||||||||||| ||| |||||    
T  50190864 cgggaataaaatttagtaaacttgtaacaaacgtaggcatat 50190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 29769490 - 29769526
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatat 42  Q
    ||||||||||||||  |||||||||||||||||||||    
T  29769490 ataaaatttagtaattttgtaacaaacatagacatat 29769526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 39872018 - 39871936
Alignment:
Q  9 aaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||   ||||||||| ||||| | ||||| ||| ||||||||| ||||| |||||  ||||||||||||| |||||    
T  39872018 aaatttagtaaact---aacaaacat-gacatgtatatttctatcattttattctcaaaaatctacggatataacttgaaagaaaca 39871936  T

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Target: scaffold0238 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 23390 - 23302
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| || || ||||||||||||| || ||||||||    
T  23390 ataaaatttagtaaacttgtaacaaacatagacatgtatatttctataattttattctcagaaatctacaaatataatttaaaacaaac 23302  T

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Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 18824117 - 18824212
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttt-tataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||| |||||||||||||||||| ||||| |||||| ||| ||||||||||||||| || ||||||| |||||||||||||||    
T  18824117 cgggaataaaatttagtgaacttgtaacaaacataggcatatatattttctatcattttattcccaaaaatcaacaaatacaacttgaaacaaaca 18824212  T

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Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 43445977 - 43445890
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaa 93  Q
    |||||||||||||||||| ||||||| |||| |||||  |||||||||||||||||| ||| | |||| |||||||||||||||||||    
T  43445977 ataaaatttagtaaacttataacaaatataggcatatacatttttataattttattcgcaagaatctataaatataacttgaaacaaa 43445890  T

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Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 41684116 - 41684027
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||| |||||| ||||| ||| || |||||| ||  | || |||||||||||||||||||||||    
T  41684116 ataaaatttagtaaacttgtaacaaacataaacatatatatttctatcatattattctcaggaatcaacaaatataacttgaaacaaaca 41684027  T

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Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 45440879 - 45440974
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacat--atgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||  |||  |||| ||||||| ||||||||||||| | ||||||| ||||||||||||||||||    
T  45440879 cgggaataaaatttagtaaacttgtaacaaacatatgcatgtatgt-tttttatgattttattcccaagaatctacaattataacttgaaacaaaca 45440974  T

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Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 6656315 - 6656229
Alignment:
Q  9 aaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||| ||||||||||||  |||| ||||  ||| |||||||| |||||| || |||||||||||||||||||||||    
T  6656315 aaatttagtaaacttataacaaacataggtatatatattcatatcattttatttccaaaaatcaacaaatataacttgaaacaaaca 6656229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 6656563 - 6656478
Alignment:
Q  9 aaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||| ||||| ||||  ||| | |||||| |||||| || |||||||||||||||||||||||    
T  6656563 aaatttagtaaacttgtaacaaacataggcatatatattcatatca-tttatttccaaaaatcaacaaatataacttgaaacaaaca 6656478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 30686091 - 30685997
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||  ||| | | ||||||| |||||||||| |  | ||||||| ||||||||||||||||||    
T  30686091 cgggaataaaatttagtaaacttgtaacaaacatatgcatgtatgtttttatgattttattccaacgaatctacaattataacttgaaacaaaca 30685997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 48160685 - 48160596
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  48160685 ataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 48160596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 25924731 - 25924639
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatac 98  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| |||||||||||||||||||||    
T  25924731 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacatac 25924639  T

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Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11000674 - 11000769
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagac-atatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| | |||| ||||| ||| |||||||| |||  | || ||| |||||||||||||||||||    
T  11000674 cgggaataaaatttagtaaacttgtaacaaacataggctatatatatttatatcattttatttccaggaatcaacatatataacttgaaacaaaca 11000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 47246160 - 47246070
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttata--attttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||| ||||||||||||||||||||||| |||| ||||| ||||  |||||||| | || | ||||||||||||| |||||||||||    
T  47246160 ataaaattcagtaaacttgtaacaaacatagaaatatatatttctatatcattttatttctaagaatctacaaatataatttgaaacaaac 47246070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 5543225 - 5543143
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaa 88  Q
    |||||||||||||||||||||||||||||| |||| | ||||| |||  |||||||||||| | ||||| || ||||||||||    
T  5543225 ataaaatttagtaaacttgtaacaaacataaacatgtatatttatatcgttttattcccaagaatctacgaaaataacttgaa 5543143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25045716 - 25045623
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||  ||||| ||||  |||  |||||| |||| || || |||||||||||||||||||||||    
T  25045716 cgggaataaaatttagtaaacttgtaacaaacatatgcatatatattcctatctttttatccccagaa-tcaacaaatataacttgaaacaaaca 25045623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 35488288 - 35488194
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||  || || |||| ||||||||||||||||||    
T  35488288 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaaca 35488194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 44566017 - 44566111
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||| ||||||||||||||||||||||||||  |||  ||| |||||||| ||  || || |||| ||||||||||||||||||    
T  44566017 cgggaataaaatttaataaacttgtaacaaacatagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaaca 44566111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 45448914 - 45449008
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||||||| |  |||  ||| ||||||||||| | | || | || ||||||||||||||||||    
T  45448914 cgggaataaaatttagtaaacttgtaacaaacatagacatctacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaaca 45449008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 10902744 - 10902667
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataac 83  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||   |||| ||||| ||||||||    
T  10902744 ataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcattttatttttaaaaatctactaatataac 10902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 11329970 - 11330059
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  11329970 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 11330059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 25098046 - 25098135
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||| | |||||  |||  ||| ||||||||||| ||| || | || ||||||||||||||||||    
T  25098046 ataaaatttagtaaacttgtaacaaacatgggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 25098135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 27213949 - 27213860
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  27213949 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 27213860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 33378819 - 33378908
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  33378819 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 33378908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 39554160 - 39554249
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  39554160 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 39554249  T

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Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 40212866 - 40212955
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  40212866 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgcgaatcaacaattataacttgaaacaaaca 40212955  T

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Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 43949222 - 43949311
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  43949222 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 43949311  T

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Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 38528801 - 38528714
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||| ||||||||||||||||||||||  ||||  ||| ||||| ||||||||  ||||| | || |||||||||||||||||||||    
T  38528801 ataaaatctagtaaacttgtaacaaacataagcata--tatatttatgattttattttcaaaaatatataaatataacttgaaacaaaca 38528714  T

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Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 48314094 - 48314188
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||| |||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  48314094 cgggaataaaatttagtaaacttctaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 48314188  T

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Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 48341334 - 48341428
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||| |||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  48341334 cgggaataaaatttaataaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 48341428  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 16825448 - 16825359
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||| |  | |  |||| ||||||||||||||||||    
T  16825448 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcctaggaattaacaattataacttgaaacaaaca 16825359  T

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Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 27248270 - 27248359
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  27248270 ataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 27248359  T

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Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 27419318 - 27419229
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | ||  ||| ||||||||||||||||||    
T  27419318 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcagcaattataacttgaaacaaaca 27419229  T

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Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 28904280 - 28904191
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||||||||||  |||| ||| ||||||||| |   | || |||| |||||||| |||||||||    
T  28904280 ataaattttagtaaacttgtaacaaacatagacatatacatttctatcattttattctcgggaatcaacaattataacttaaaacaaaca 28904191  T

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Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 37534197 - 37534108
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||| |||||||||||||||||||||||  ||| | | ||||||| |||||||| |||  | ||||||| |||||| |||||||||||    
T  37534197 ataaaagttagtaaacttgtaacaaacatatgcatgtatgtttttatgattttatttccaggaatctacaattataacatgaaacaaaca 37534108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 41632458 - 41632369
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||| |||||||| |||||  |||| ||| ||||||||| ||  | || |||| ||||||||||||||||||    
T  41632458 ataaattttagtaaacttgtaataaacataggcatatacatttctatcattttattctcaggaatcaacaattataacttgaaacaaaca 41632369  T

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Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 45265142 - 45265053
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||| |||||||||||| |||||  |||   || ||||||||||| | | || |||| ||||||||||||||||||    
T  45265142 ataaaatttagtaaacttataacaaacataggcatatacattccaatcattttattcccgagaatcaacaattataacttgaaacaaaca 45265053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9947089 - 9947026
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattccc 64  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||    
T  9947089 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattccc 9947026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 38396465 - 38396371
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||| || |||||||||||||||  |||  ||| |||||||||||   | || |||| ||||||||| ||||||||    
T  38396465 cgggaataaaatttagtaaacttataccaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttggaacaaaca 38396371  T

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Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 45045603 - 45045692
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| |||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| |||||||| |||||||||    
T  45045603 ataaaatttaataaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttaaaacaaaca 45045692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 31598654 - 31598742
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||||||||||||||||||| |||  ||| ||||||| |||  |||||||  ||  | ||||  |||||||||||||||||||    
T  31598654 ataaaatttagtaaacttgtaacaaatataagcatttgtatttctatcgttttattttcaggaatctatgaatataacttgaaacaaac 31598742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 34930561 - 34930470
Alignment:
Q  6 ataaaatttagtaaacttgtaac-aaacatagacatatgtatttttataattttattcccaaaagtctacaaatataac-ttgaaacaaaca 95  Q
    ||||| ||||||||||||||||| |||||||| |||||  |||| ||| ||||||||||||  | || |||| |||||| ||||||||||||    
T  34930561 ataaattttagtaaacttgtaacaaaacataggcatatacatttctatcattttattcccaggaatcaacaattataactttgaaacaaaca 34930470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38544166 - 38544260
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||| ||||| |||||||| |||||  |||  ||| |||||||| ||   | || |||| ||||||||||||||||||    
T  38544166 cgggaataaaatttagtaaacctgtaataaacataggcatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaaca 38544260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 45723121 - 45723167
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatt 47  Q
    |||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  45723121 cgggaataaaatttagtaaacttgtgacaaacataggcatatatatt 45723167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 8419683 - 8419594
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||  |||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  8419683 ataaaataaagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 8419594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9814313 - 9814223
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||    ||||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  9814313 cgggaataaaatttagtaaacttgtaacaaac----acatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 9814223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 44820231 - 44820320
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||| ||||| ||||||||||| | ||| ||  |||| ||| ||||||||||  ||| || |||| ||||||||||||||||||    
T  44820231 ataaattttaataaacatgtaacaaacacatacaaatacatttctatcattttattcctgaaaatcaacaattataacttgaaacaaaca 44820320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33444724 - 33444631
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| ||  | || |||||||||||||||||||||||    
T  33444724 cgggaataaaatttagtaa-cttgtaacaaacatagacatatatatttttatcattttattctcaggaatcaacaaatataacttgaaacaaaca 33444631  T

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Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 25899609 - 25899698
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| |||||||| |||||||||||||| ||| |||||||| ||||||||||||  | ||||||||||||| ||||||||||||    
T  25899609 ataaaatttaataaacttgcaacaaacatagacacatgcatttttatgattttattcccaggaatctacaaatataatttgaaacaaaca 25899698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 15226941 - 15227029
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||  |  | ||||| |||||||||||||||||||    
T  15226941 ataaaatttagtaaacttgtaacaaacataaacatatgtatttatatgattttattcagaggaatctacgaatataacttgaaacaaac 15227029  T

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Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21137231 - 21137137
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||| ||  | || ||||||||||||| |||||||||    
T  21137231 cgggaataaaatttagtaaacttgtaacaaacataggcatatatatttctattattttattctcaggaatcaacaaatataacttcaaacaaaca 21137137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 38132831 - 38132742
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||||||||||  |||| ||| ||||||||||| | | || |||| ||||||||||||||||||    
T  38132831 ataaattttagtaaacttgtaacaaacatagacatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 38132742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 1554453 - 1554359
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  1554453 cgggaataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 1554359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35394362 - 35394456
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||| |   | || | |||||||||||||||||||||    
T  35394362 cgggaataaaatttagtaaacttgtaacaaacatagacatatatatttctttcattttattctcgtgaatcaataaatataacttgaaacaaaca 35394456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 7317350 - 7317439
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| ||||| ||||  ||| ||||||||    ||| || |||||||||||||||||||||||    
T  7317350 ataaaatttagtaaacttgtaacaaacataggcatatatattcctatcattttatttttgaaaatcaacaaatataacttgaaacaaaca 7317439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 29421583 - 29421494
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| ||||||||||||||||||| |||||| ||||| ||| ||||||||| ||  | || |||||||||| ||||||||||||    
T  29421583 ataaaatttaataaacttgtaacaaacataaacatatatatttctatcattttattctcatgaatcaacaaatataatttgaaacaaaca 29421494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 41432712 - 41432804
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaa 93  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||  ||| ||||||||||||  | || || |||||||||| |||||||    
T  41432712 cgggaataaaatttagtaaacttgtaacaaacataaacatgtgtattcctatcattttattcccaggaatccacgaatataacttaaaacaaa 41432804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 43872065 - 43871969
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacata 97  Q
    |||| ||||||||||  ||||||||||||||||||| ||| | | ||||||| |||||||| |||| | |||| || ||||||||||||||||||||    
T  43872065 cgggaataaaatttaacaaacttgtaacaaacataggcatgtatgtttttatgattttatttccaagaatctataattataacttgaaacaaacata 43871969  T

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Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 16313606 - 16313512
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||  ||||  |||  ||| |||||||||||  || || |||| ||||||||||||||||||    
T  16313606 cgggaataaaatttagtaaacttgtaacaaacataggtatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 16313512  T

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Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 32661032 - 32660938
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||| |||||||||||||||||||| |||||  |||  ||| ||||||||||||  | || |||| ||||||||||||||||||    
T  32661032 cgggaataaaatttaataaacttgtaacaaacataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaaca 32660938  T

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Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3049981 - 3050074
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| |||||||||||||||||    
T  3049981 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaac 3050074  T

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Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 7931216 - 7931305
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||| ||||||||||| ||||||  |||| ||| ||||||||||||  | || |||| ||||||||||||||||||    
T  7931216 ataaattttagtaaacttataacaaacatatacatatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaaca 7931305  T

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Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 12710622 - 12710711
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  12710622 ataaattttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 12710711  T

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Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 18726713 - 18726624
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  18726713 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 18726624  T

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Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 26062121 - 26062210
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||||||||||||||||||||||||  ||||  |||| ||| ||||||||||| | | || |||| ||||||||||||||||||    
T  26062121 ataaattttagtaaacttgtaacaaacataggaatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 26062210  T

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Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 42755844 - 42755933
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||||||||||| ||||||| |||||  |||| ||| ||||||||||||  | || |||| ||||||||||||||||||    
T  42755844 ataaattttagtaaacttgtaactaacataggcatatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaaca 42755933  T

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Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 16219037 - 16218949
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||| ||||||||||||||||||||||| ||||  ||||| |||  ||||||||||| ||  |||| ||||||| |||||||||||    
T  16219037 ataaaatctagtaaacttgtaacaaacataggcatacatatttctatcgttttattcccagaaaactacgaatataatttgaaacaaac 16218949  T

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Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 18298084 - 18298178
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||  ||||  |||  ||| ||||||||||| | | || | || ||||||||||||||||||    
T  18298084 cgggaataaaatttagtaaacttgtaacaaacataggtatatacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaaca 18298178  T

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Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 35818523 - 35818429
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  35818523 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 35818429  T

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Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38364053 - 38364147
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  38364053 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 38364147  T

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Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 14764025 - 14763936
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||| ||||||||||  ||| | ||||| ||| ||||||||| || ||  |||  ||||||||||||||||||||    
T  14764025 ataaaatttagtaaacttgaaacaaacatatgcatgtatatttctatcattttattcacataaaactatgaatataacttgaaacaaaca 14763936  T

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Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 26602032 - 26601943
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||| ||||||||||||    
T  26602032 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataatttgaaacaaaca 26601943  T

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Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37392645 - 37392553
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaa 93  Q
    |||| |||||||||| |||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||    
T  37392645 cgggaataaaatttaataaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 37392553  T

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Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 38437431 - 38437519
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    ||||||||| |||||||||||||||||||||| |||||||||  |||  |||||||  ||  | | |||||||||||||| ||||||||    
T  38437431 ataaaattttgtaaacttgtaacaaacatagatatatgtattcctatcgttttattttcaggaatatacaaatataacttaaaacaaac 38437519  T

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Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 40197170 - 40197078
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatac 98  Q
    ||||| |||||||||||| ||||||||||| ||||||  |||| ||| |||||||| ||   | || |||| |||||||||||||||||||||    
T  40197170 ataaattttagtaaacttataacaaacataaacatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaacatac 40197078  T

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Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25837883 - 25837977
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||| ||||||||||||||||||||| ||| |  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  25837883 cgggaataaaattttgtaaacttgtaacaaacataggcatgtacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 25837977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 10896311 - 10896222
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| ||||||||| ||||||||||||||| |||||  |||| ||| ||||||||||    | || |||| ||||||||||||||||||    
T  10896311 ataaattttagtaaatttgtaacaaacataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaaca 10896222  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 19160832 - 19160778
Alignment:
Q  9 aaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcc 63  Q
    ||||||||||||||||||||||||||   ||||| ||||| ||| ||||||||||    
T  19160832 aaatttagtaaacttgtaacaaacatctgcatatatatttatattattttattcc 19160778  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41228813 - 41228719
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| ||||||||||||||||||||||||||| ||| |||||  |||  ||  |||||||||||   | |  |||| ||||||||||||||||||    
T  41228813 cgggaataaaatttagtaaacttgtaacaaacgtaggcatatacattcctaccattttattcccgggaattaacaattataacttgaaacaaaca 41228719  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 44161731 - 44161806
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgta--tttttataattttattcccaaaagtctacaaata 79  Q
    ||||||||||||||| || ||| ||||||| |||||| ||  ||||||| |||||||| | |||| ||||||||||    
T  44161731 ataaaatttagtaaatttataataaacataaacatatatatttttttatcattttatttcaaaaaatctacaaata 44161806  T

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Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 6705859 - 6705770
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||| |  | || |||||||||||||||||||||||    
T  6705859 ataaaatttagtaaacttgtaacaaacatagacatatatatttctaccattttattccaatgaatcaacaaatataacttgaaacaaaca 6705770  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21008123 - 21008035
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaa 89  Q
    |||| |||||||||||||||| ||||||||| | || ||||| ||||||||| |||||||||||| || || |||||||||||||||||    
T  21008123 cgggaataaaatttagtaaacctgtaacaaatagaggcatatatatttttatcattttattcccagaaatcaacaaatataacttgaaa 21008035  T

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Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 16968902 - 16968989
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaa 93  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||| ||||||||| ||  | || |||| ||||||||||||||||    
T  16968902 ataaaatttagtaaacttgtaacaaacatagacatatagattcctatcattttattctcaggaatcaacaattataacttgaaacaaa 16968989  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 345925 - 345835
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataatttta-ttcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||| |||||| |||| |  | ||||| |||||||||| |||||||||    
T  345925 ataaaatttagtaaacttgtaacaaacatagacatgtgtattcctatcattttatttcctaggaatctacgaatataacttaaaacaaaca 345835  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 7053664 - 7053575
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  7053664 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 7053575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 8314885 - 8314982
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacatac 98  Q
    |||| ||||||||||||||||||||||||||||||   || | | ||||||| ||||||||| ||  | |||| || |||||||||||||||||||||    
T  8314885 cgggaataaaatttagtaaacttgtaacaaacatatgaatgtatgtttttatgattttattctcatgaatctagaattataacttgaaacaaacatac 8314982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 9760464 - 9760376
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||||||||||||||||| ||||||| |||| ||| | || ||  || ||||||||| ||| |||||||||| ||||||||||||||||    
T  9760464 ataaaatttagtaaacttataacaaaaataggcatgtataattcgatcattttattctcaagagtctacaaagataacttgaaacaaac 9760376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 8029316 - 8029399
Alignment:
Q  12 tttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||| |||||  |||| ||| |||||||||||   | || |||| ||||||||||||||||||    
T  8029316 tttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 8029399  T

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Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2657672 - 2657766
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||| |||||||||||||||||||||||||||||||  ||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  2657672 cgggaataaaatttagtaaacttgtaacaaacataggtatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 2657766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 14170990 - 14171079
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || | || ||||||||||||||||||    
T  14170990 ataaaatttagtaaacttgtaacaaacataggcatatagattcctatcattttattcccgggaatcaaaaattataacttgaaacaaaca 14171079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 3869482 - 3869571
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||| | ||| | |||||||| |||  |||  ||||| ||| |||||||||||| || |||||||| |||||||||||||||||    
T  3869482 ataaaatttaatgaacatttaacaaacgtagtaatacatatttctatcattttattcccagaaatctacaaaaataacttgaaacaaaca 3869571  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 8769632 - 8769683
Alignment:
Q  251 agtgatttcttcaaatatagataaacttcaaatgaaa-gggttcctaacaac 301  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||| |||||||    
T  8769632 agtgatttcttcaaacatagataaaattcaaatgaaatgggttcttaacaac 8769683  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 1316995 - 1317084
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||  |||||||||||||||||||||| |||||  |||   || |||||||||||   | || |||| ||||||||||||||||||    
T  1316995 ataaaataaagtaaacttgtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 1317084  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 7344177 - 7344088
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    |||||||||||||||||||||||||| |||| |||||  |||  ||| ||||||||| |  || | ||||| ||||| ||||||| ||||    
T  7344177 ataaaatttagtaaacttgtaacaaatataggcatatacattcctatcattttattctcggaaatttacaattataatttgaaacgaaca 7344088  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 14781714 - 14781685
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacata 35  Q
    ||||||||||||||||||||||||||||||    
T  14781714 ataaaatttagtaaacttgtaacaaacata 14781685  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 18897898 - 18897987
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||| |||| |||||||||||||||||||| |||||  |||| ||| | |||||| ||   | || |||| ||||||||||||||||||    
T  18897898 ataaattttaataaacttgtaacaaacataggcatatacatttctatcactttatttccgggaatcaacaattataacttgaaacaaaca 18897987  T

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Target: scaffold0189 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 29051 - 28955
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaacata 97  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||  ||| ||||||||||| ||| || |||| ||||||||||||||||||||    
T  29051 cgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaacata 28955  T

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Target: scaffold0006 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 119297 - 119387
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattccc-aaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||| ||| ||||||| |||| |||||||||||||   ||||||||||    
T  119297 ataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcattgtattcccaaaaaatctacaaatataatcagaaacaaaca 119387  T

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Target: scaffold0006; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 143585 - 143678
Alignment:
Q  1 cgggcataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaac 94  Q
    |||| ||||||||||||||||||||||||||| || |||||| ||||| ||| ||||||||| ||  | || |||||| |||||||||||||||    
T  143585 cgggaataaaatttagtaaacttgtaacaaacgtatacatatatatttctatcattttattctcaggaatcaacaaatttaacttgaaacaaac 143678  T

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Target: scaffold0006; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 201902 - 201991
Alignment:
Q  6 ataaaatttagtaaacttgtaacaaacatagacatatgtatttttataattttattcccaaaagtctacaaatataacttgaaacaaaca 95  Q
    ||||||||||||||||||||||||||||||| |||||  |||  ||| |||||||||||   | || |||| ||||||||||||||||||    
T  201902 ataaaatttagtaaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 201991  T

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