View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4681_high_32 (Length: 342)
Name: NF4681_high_32
Description: NF4681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4681_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 53 - 337
Target Start/End: Complemental strand, 28151248 - 28150964
Alignment:
| Q |
53 |
ttctgtttcatcttttagagaatcatgataattcatactctgcttgccactaatatctacaataaatgttttagttttggttttctaacaatccattatc |
152 |
Q |
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| T |
28151248 |
ttctgtttcatcttttagagaatcatgataattcatactctgcttgccactaatatctagaataaatgttttagttttggttttctaacaatccattatc |
28151149 |
T |
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| Q |
153 |
ttatttcttggtcagaacatcttggatccactgattttgtggagaaagggacagaaagtgttgtgtttagaacctgtgatcaagnnnnnnntagagttgt |
252 |
Q |
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| T |
28151148 |
ttatttcttggtcagaacatcttggatccactgattttgtggagaaagggacagaaagtgttgtgtttagaacctgtgatcaagaaaaaaatagagttgt |
28151049 |
T |
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| Q |
253 |
gtttcaaataggaacatctgatgctgtgagggctctaactgctgctcagttagtgtaagttgattgtatatttagttttcctttg |
337 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28151048 |
gtttcaaataggaacatctaatgctgtgagggctctaactgctgctcagttagtgtaagttgattgtatatttagttttcctttg |
28150964 |
T |
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