View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4681_high_42 (Length: 321)
Name: NF4681_high_42
Description: NF4681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4681_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 305
Target Start/End: Original strand, 43357770 - 43358057
Alignment:
| Q |
17 |
atgaaaatgggcttgtcaaatgcaccatttgctgctagaaattgattgatcttactaaaaggtccaactttttccactcctcaactctgaactttacatt |
116 |
Q |
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| T |
43357770 |
atgaaaatgggcttgtcaaatgcaccatttgctgctagaaattgattgatcttactaaaaggtccaactttttccactcctcaactctgaattttacatt |
43357869 |
T |
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| Q |
117 |
cgaaaaagacat-aagtttttatgtcgtttattagaagtatactttcatgccnnnnnnnttgtannnnnnncctatgaaagtatatttcccaaatcatgt |
215 |
Q |
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| T |
43357870 |
cgaaaaagacataaagtttttatgtcgt---ttagaagtatactttcataccaaaaaaattgtatttttttcctatgaaagtatatttcccaaatcatgt |
43357966 |
T |
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| Q |
216 |
ataagtatcactaaaacctaggatgtgtttgatttttatatcttgttgtaatatagtgtatttaatttacctaagacat-gttcttatgtt |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |
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| T |
43357967 |
ataagtatcactaaaacctaggatgtgtttgatttttatatcttgttgtaatatagtgtatttaatttaccttagacatggttcttatgtt |
43358057 |
T |
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