View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4681_high_63 (Length: 235)
Name: NF4681_high_63
Description: NF4681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4681_high_63 |
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| [»] scaffold0007 (1 HSPs) |
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Alignment Details
Target: scaffold0007 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 24 - 235
Target Start/End: Complemental strand, 150514 - 150303
Alignment:
| Q |
24 |
tgagaagatctcattcttgatcccataaactgtgaaagttcttcaaaaacttcttcatcaaaagaagctggtaacctatgcaactttctttcataaggtg |
123 |
Q |
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| T |
150514 |
tgagaagatctcattcttgatcccataaactgtgaaagttcttcaaaaacttcttcatcaaaagaagctggtaacctatgcaactttctttcataaggtg |
150415 |
T |
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| Q |
124 |
acagtctaaaatagcttttaccaacttgttctctttcaccacctctttcccattcataaactttcctaaactcacctaacatgttatcccattttgttcc |
223 |
Q |
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| T |
150414 |
aaagtctaaaatagcttttaccaacttgttctctttcaccacctctttcccattcataaactttcctaaactcacctaacatgttatcccattttgtacc |
150315 |
T |
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| Q |
224 |
tgctgtttttgc |
235 |
Q |
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|||||||||||| |
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| T |
150314 |
tgctgtttttgc |
150303 |
T |
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