View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4683-Insertion-3 (Length: 510)

Name: NF4683-Insertion-3
Description: NF4683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4683-Insertion-3
NF4683-Insertion-3
[»] chr2 (42 HSPs)
chr2 (172-510)||(44282494-44282829)
chr2 (171-401)||(40254343-40254573)
chr2 (179-401)||(14379667-14379889)
chr2 (166-387)||(31786693-31786914)
chr2 (181-395)||(31686770-31686984)
chr2 (398-510)||(14380649-14380761)
chr2 (398-510)||(31686362-31686474)
chr2 (398-510)||(31787192-31787304)
chr2 (398-510)||(40255052-40255164)
chr2 (178-380)||(2443663-2443866)
chr2 (412-510)||(7474086-7474184)
chr2 (402-510)||(17481337-17481445)
chr2 (402-501)||(2442682-2442781)
chr2 (402-510)||(43341717-43341825)
chr2 (406-510)||(13896532-13896635)
chr2 (406-510)||(14037149-14037252)
chr2 (402-510)||(35457627-35457735)
chr2 (412-510)||(37640204-37640302)
chr2 (426-510)||(16765735-16765819)
chr2 (405-509)||(43695580-43695684)
chr2 (402-510)||(32496651-32496759)
chr2 (404-510)||(19860809-19860915)
chr2 (250-348)||(37640761-37640859)
chr2 (250-348)||(37996718-37996816)
chr2 (402-510)||(44003192-44003297)
chr2 (253-348)||(3739048-3739143)
chr2 (402-510)||(31047834-31047942)
chr2 (250-348)||(7473518-7473616)
chr2 (250-348)||(17480814-17480912)
chr2 (437-499)||(33597662-33597724)
chr2 (284-345)||(37551592-37551653)
chr2 (250-348)||(14033372-14033470)
chr2 (250-348)||(43342277-43342375)
chr2 (426-475)||(16467046-16467095)
chr2 (427-479)||(3853861-3853913)
chr2 (420-478)||(3680728-3680786)
chr2 (250-348)||(13892752-13892850)
chr2 (250-348)||(14032877-14032975)
chr2 (250-348)||(35458185-35458283)
chr2 (429-479)||(40951714-40951764)
chr2 (287-345)||(44002684-44002742)
chr2 (426-479)||(18511062-18511115)
[»] chr1 (57 HSPs)
chr1 (173-510)||(36495922-36496256)
chr1 (172-510)||(38627538-38627873)
chr1 (172-401)||(38843151-38843380)
chr1 (168-401)||(51488472-51488705)
chr1 (172-401)||(7593180-7593409)
chr1 (172-401)||(50979212-50979441)
chr1 (173-401)||(5271480-5271708)
chr1 (171-401)||(27000243-27000473)
chr1 (172-389)||(26821382-26821599)
chr1 (166-375)||(15353222-15353431)
chr1 (398-510)||(5271048-5271160)
chr1 (398-510)||(15353702-15353814)
chr1 (398-510)||(26821879-26821991)
chr1 (398-510)||(50978368-50978480)
chr1 (398-510)||(51487917-51488029)
chr1 (398-510)||(7592747-7592859)
chr1 (398-510)||(26999833-26999945)
chr1 (398-510)||(38843859-38843971)
chr1 (178-358)||(27575900-27576081)
chr1 (402-510)||(31099905-31100013)
chr1 (402-501)||(27576681-27576780)
chr1 (402-510)||(42137140-42137249)
chr1 (399-509)||(45179870-45179980)
chr1 (406-510)||(35606868-35606972)
chr1 (406-510)||(46408024-46408127)
chr1 (412-510)||(50031388-50031486)
chr1 (401-510)||(6706666-6706775)
chr1 (402-510)||(4484674-4484782)
chr1 (402-505)||(11050575-11050679)
chr1 (408-508)||(46033182-46033282)
chr1 (402-510)||(47655147-47655255)
chr1 (402-477)||(27067670-27067745)
chr1 (402-505)||(41512692-41512795)
chr1 (403-501)||(11829559-11829657)
chr1 (421-510)||(16342910-16342999)
chr1 (402-510)||(7385764-7385875)
chr1 (249-348)||(47655888-47655987)
chr1 (426-500)||(50521069-50521143)
chr1 (427-510)||(1763271-1763354)
chr1 (432-510)||(44740674-44740752)
chr1 (450-510)||(24076060-24076120)
chr1 (248-318)||(11051192-11051262)
chr1 (402-479)||(13509409-13509487)
chr1 (415-509)||(49431179-49431272)
chr1 (283-345)||(1762251-1762313)
chr1 (250-348)||(6706132-6706230)
chr1 (250-348)||(13509940-13510038)
chr1 (248-345)||(11829075-11829172)
chr1 (426-479)||(15884201-15884254)
chr1 (250-348)||(46406421-46406519)
chr1 (420-478)||(46581283-46581341)
chr1 (250-348)||(35604814-35604912)
chr1 (56-101)||(21324828-21324873)
chr1 (426-479)||(23628803-23628856)
chr1 (248-313)||(46033716-46033781)
chr1 (426-478)||(41904-41956)
chr1 (435-479)||(35569300-35569344)
[»] chr3 (54 HSPs)
chr3 (171-510)||(47696998-47697346)
chr3 (172-401)||(51128991-51129220)
chr3 (172-401)||(47141378-47141607)
chr3 (171-401)||(1527530-1527760)
chr3 (171-401)||(52691926-52692156)
chr3 (172-401)||(38469068-38469297)
chr3 (398-510)||(1528050-1528162)
chr3 (398-510)||(47140792-47140904)
chr3 (398-510)||(51124812-51124924)
chr3 (398-510)||(38469725-38469837)
chr3 (398-510)||(52693084-52693196)
chr3 (399-510)||(28884218-28884329)
chr3 (402-510)||(30811251-30811359)
chr3 (402-510)||(33329407-33329515)
chr3 (402-510)||(39252024-39252132)
chr3 (402-510)||(48181608-48181716)
chr3 (419-508)||(44329195-44329284)
chr3 (402-510)||(33025231-33025339)
chr3 (402-510)||(48253944-48254052)
chr3 (412-506)||(11264250-11264344)
chr3 (402-510)||(50392268-50392376)
chr3 (250-348)||(33025798-33025896)
chr3 (402-499)||(39267119-39267216)
chr3 (402-510)||(42074877-42074985)
chr3 (406-510)||(44610282-44610385)
chr3 (402-510)||(51230247-51230355)
chr3 (250-348)||(42074392-42074490)
chr3 (402-510)||(40237799-40237907)
chr3 (403-479)||(53686564-53686640)
chr3 (250-349)||(53687376-53687475)
chr3 (401-499)||(40244040-40244138)
chr3 (400-510)||(45488550-45488660)
chr3 (250-348)||(51229727-51229825)
chr3 (405-510)||(41536321-41536426)
chr3 (418-510)||(42275090-42275187)
chr3 (439-509)||(5104752-5104822)
chr3 (419-510)||(45151168-45151263)
chr3 (250-319)||(51407464-51407533)
chr3 (252-348)||(48181071-48181167)
chr3 (268-346)||(11263709-11263787)
chr3 (250-348)||(42274518-42274616)
chr3 (250-348)||(45150598-45150696)
chr3 (250-346)||(48254506-48254602)
chr3 (250-348)||(28182370-28182468)
chr3 (283-345)||(30809842-30809904)
chr3 (250-348)||(31813401-31813499)
chr3 (283-345)||(44610827-44610889)
chr3 (441-498)||(52764662-52764719)
chr3 (435-479)||(31618984-31619028)
chr3 (420-478)||(14651199-14651257)
chr3 (283-345)||(44328692-44328754)
chr3 (426-479)||(37698486-37698539)
chr3 (423-480)||(42475657-42475714)
chr3 (435-479)||(23496284-23496328)
[»] chr5 (49 HSPs)
chr5 (172-510)||(33114956-33115291)
chr5 (173-510)||(14082814-14083148)
chr5 (173-401)||(29542418-29542646)
chr5 (171-401)||(3260815-3261045)
chr5 (172-401)||(42663356-42663585)
chr5 (398-510)||(29541863-29541975)
chr5 (398-510)||(3260379-3260491)
chr5 (398-510)||(42663919-42664031)
chr5 (399-510)||(33082394-33082505)
chr5 (402-510)||(33386925-33387033)
chr5 (402-510)||(10900676-10900784)
chr5 (402-501)||(2526848-2526947)
chr5 (402-510)||(8957949-8958057)
chr5 (406-510)||(27738006-27738110)
chr5 (402-510)||(31905981-31906089)
chr5 (402-510)||(40979959-40980067)
chr5 (412-510)||(37046116-37046214)
chr5 (402-510)||(41741669-41741777)
chr5 (406-499)||(7071484-7071577)
chr5 (406-510)||(33232993-33233096)
chr5 (412-510)||(25256286-25256384)
chr5 (412-510)||(25320075-25320173)
chr5 (402-499)||(4295474-4295571)
chr5 (402-510)||(20069133-20069241)
chr5 (401-509)||(39236079-39236186)
chr5 (402-509)||(11017883-11017990)
chr5 (426-510)||(41039599-41039683)
chr5 (248-345)||(2526282-2526379)
chr5 (250-322)||(53693-53765)
chr5 (402-497)||(53101-53196)
chr5 (250-348)||(27739351-27739449)
chr5 (252-349)||(8958502-8958599)
chr5 (250-347)||(37066560-37066657)
chr5 (250-347)||(41040137-41040234)
chr5 (250-348)||(7073275-7073373)
chr5 (452-510)||(19357056-19357114)
chr5 (250-348)||(21022632-21022730)
chr5 (250-348)||(33229204-33229302)
chr5 (250-348)||(39236896-39236994)
chr5 (426-479)||(7178743-7178796)
chr5 (427-479)||(19784778-19784831)
chr5 (426-478)||(4569176-4569228)
chr5 (428-479)||(32454504-32454555)
chr5 (283-322)||(40979452-40979491)
chr5 (283-345)||(10900165-10900227)
chr5 (250-348)||(19356501-19356599)
chr5 (283-345)||(19375409-19375471)
chr5 (426-479)||(3747684-3747737)
chr5 (435-479)||(22482163-22482207)
[»] chr8 (43 HSPs)
chr8 (168-401)||(30984278-30984511)
chr8 (172-401)||(30210394-30210623)
chr8 (170-401)||(34774324-34774555)
chr8 (398-510)||(193928-194040)
chr8 (398-510)||(629256-629368)
chr8 (398-510)||(721532-721644)
chr8 (398-510)||(882639-882751)
chr8 (398-510)||(30211126-30211238)
chr8 (398-510)||(34773871-34773983)
chr8 (216-326)||(629476-629586)
chr8 (398-510)||(30982652-30982764)
chr8 (313-401)||(189774-189862)
chr8 (313-401)||(717378-717466)
chr8 (313-401)||(878485-878573)
chr8 (402-499)||(13016219-13016316)
chr8 (402-510)||(924573-924681)
chr8 (412-510)||(35801758-35801856)
chr8 (402-510)||(2026056-2026164)
chr8 (402-510)||(26575770-26575878)
chr8 (402-509)||(8417202-8417309)
chr8 (406-510)||(44240658-44240761)
chr8 (402-506)||(45275848-45275952)
chr8 (402-510)||(23018310-23018418)
chr8 (432-510)||(2598506-2598584)
chr8 (250-348)||(35164381-35164474)
chr8 (250-348)||(35802344-35802442)
chr8 (248-318)||(924099-924169)
chr8 (433-510)||(17073677-17073754)
chr8 (433-510)||(17574516-17574593)
chr8 (402-510)||(36821070-36821176)
chr8 (250-348)||(45276403-45276501)
chr8 (171-215)||(308871-308915)
chr8 (250-348)||(8416662-8416760)
chr8 (250-322)||(36821653-36821725)
chr8 (426-479)||(3619165-3619218)
chr8 (420-478)||(2071665-2071723)
chr8 (283-345)||(3590107-3590169)
chr8 (426-480)||(35615668-35615722)
chr8 (426-479)||(32606549-32606602)
chr8 (426-479)||(41289155-41289208)
chr8 (427-479)||(15206656-15206708)
chr8 (427-479)||(24297688-24297740)
chr8 (432-476)||(37458403-37458447)
[»] chr7 (42 HSPs)
chr7 (169-401)||(31012379-31012611)
chr7 (171-401)||(25341421-25341651)
chr7 (398-510)||(31012038-31012150)
chr7 (398-510)||(25341019-25341131)
chr7 (402-510)||(25191306-25191414)
chr7 (399-510)||(32451295-32451406)
chr7 (402-500)||(298123-298221)
chr7 (404-501)||(41065305-41065402)
chr7 (402-510)||(1999670-1999778)
chr7 (402-510)||(4035882-4035990)
chr7 (402-510)||(26826915-26827023)
chr7 (227-358)||(41064585-41064717)
chr7 (406-509)||(12910462-12910564)
chr7 (402-509)||(15000416-15000523)
chr7 (403-510)||(39857517-39857624)
chr7 (411-499)||(40233849-40233937)
chr7 (416-510)||(47085286-47085380)
chr7 (402-499)||(11341955-11342052)
chr7 (402-510)||(39957951-39958059)
chr7 (402-510)||(43664292-43664400)
chr7 (412-510)||(26827208-26827306)
chr7 (426-510)||(25472217-25472301)
chr7 (250-348)||(25970433-25970531)
chr7 (402-510)||(30139274-30139382)
chr7 (418-510)||(30825715-30825806)
chr7 (248-345)||(39857075-39857172)
chr7 (249-348)||(37371078-37371177)
chr7 (250-348)||(14999868-14999966)
chr7 (250-348)||(30825190-30825288)
chr7 (452-510)||(37371257-37371315)
chr7 (452-510)||(45203101-45203159)
chr7 (419-476)||(26169402-26169459)
chr7 (252-348)||(26826384-26826480)
chr7 (250-348)||(25472765-25472863)
chr7 (250-348)||(12909229-12909327)
chr7 (427-477)||(41625599-41625649)
chr7 (250-348)||(43664814-43664912)
chr7 (426-477)||(2839263-2839314)
chr7 (283-345)||(19544572-19544634)
chr7 (426-480)||(39634248-39634302)
chr7 (426-479)||(40903251-40903304)
chr7 (416-476)||(40725867-40725927)
[»] chr4 (55 HSPs)
chr4 (171-401)||(31431012-31431242)
chr4 (172-401)||(24038038-24038267)
chr4 (172-401)||(24246540-24246769)
chr4 (172-401)||(39382934-39383163)
chr4 (173-401)||(18140375-18140603)
chr4 (173-401)||(49127588-49127816)
chr4 (7-172)||(2263640-2263805)
chr4 (398-510)||(24035643-24035755)
chr4 (398-510)||(24247089-24247201)
chr4 (398-510)||(39382461-39382573)
chr4 (398-510)||(49128200-49128312)
chr4 (402-510)||(16202584-16202692)
chr4 (402-510)||(39733359-39733467)
chr4 (402-501)||(51833519-51833618)
chr4 (402-510)||(5937367-5937475)
chr4 (402-510)||(26459526-26459634)
chr4 (402-510)||(30417846-30417954)
chr4 (402-510)||(50523320-50523428)
chr4 (185-371)||(51834225-51834412)
chr4 (402-510)||(28963309-28963417)
chr4 (402-510)||(29385497-29385605)
chr4 (402-510)||(45106320-45106428)
chr4 (402-498)||(51677532-51677628)
chr4 (412-510)||(22605810-22605906)
chr4 (402-510)||(53663086-53663194)
chr4 (401-510)||(53403577-53403686)
chr4 (418-510)||(56561046-56561137)
chr4 (404-510)||(8510686-8510792)
chr4 (250-348)||(53404111-53404209)
chr4 (402-510)||(28912154-28912259)
chr4 (412-510)||(38768352-38768446)
chr4 (441-510)||(48407491-48407560)
chr4 (250-348)||(45105807-45105904)
chr4 (430-510)||(36212790-36212870)
chr4 (250-348)||(52058252-52058350)
chr4 (255-348)||(30418397-30418490)
chr4 (250-346)||(22606362-22606458)
chr4 (248-318)||(28911579-28911649)
chr4 (250-348)||(38767791-38767889)
chr4 (251-348)||(53663635-53663732)
chr4 (250-346)||(28963870-28963966)
chr4 (283-345)||(16203097-16203159)
chr4 (283-345)||(39732843-39732905)
chr4 (283-345)||(50523874-50523936)
chr4 (250-322)||(49723784-49723855)
chr4 (428-479)||(43781615-43781666)
chr4 (428-479)||(51922878-51922929)
chr4 (283-345)||(5937846-5937908)
chr4 (423-480)||(25312648-25312705)
chr4 (257-322)||(26457118-26457183)
chr4 (426-479)||(38305947-38306000)
chr4 (426-479)||(41866091-41866144)
chr4 (424-476)||(13167459-13167511)
chr4 (427-479)||(20191782-20191834)
chr4 (433-509)||(29810043-29810118)
[»] chr6 (22 HSPs)
chr6 (172-401)||(30018773-30019002)
chr6 (398-510)||(30019762-30019874)
chr6 (402-501)||(4147374-4147473)
chr6 (402-501)||(27825541-27825640)
chr6 (402-499)||(31745467-31745564)
chr6 (412-510)||(10683721-10683819)
chr6 (406-510)||(21515147-21515250)
chr6 (403-510)||(20837956-20838063)
chr6 (178-358)||(31746179-31746357)
chr6 (248-345)||(4146810-4146907)
chr6 (416-498)||(921607-921688)
chr6 (428-479)||(29409348-29409399)
chr6 (250-348)||(21517357-21517455)
chr6 (427-477)||(29682119-29682169)
chr6 (428-479)||(13739159-13739210)
chr6 (428-479)||(13744659-13744710)
chr6 (283-322)||(30134180-30134219)
chr6 (250-348)||(365591-365689)
chr6 (427-477)||(16122100-16122150)
chr6 (283-345)||(20838498-20838560)
chr6 (283-345)||(27825057-27825119)
chr6 (426-479)||(21254975-21255028)
[»] scaffold0184 (1 HSPs)
scaffold0184 (402-510)||(9224-9332)
[»] scaffold0097 (1 HSPs)
scaffold0097 (412-510)||(32511-32609)
[»] scaffold0068 (2 HSPs)
scaffold0068 (402-510)||(38252-38360)
scaffold0068 (250-346)||(37697-37791)
[»] scaffold0006 (2 HSPs)
scaffold0006 (402-510)||(92086-92196)
scaffold0006 (251-348)||(91535-91634)
[»] scaffold0003 (1 HSPs)
scaffold0003 (402-508)||(301717-301823)
[»] scaffold0069 (2 HSPs)
scaffold0069 (402-510)||(17360-17471)
scaffold0069 (250-318)||(16815-16883)
[»] scaffold0808 (2 HSPs)
scaffold0808 (402-510)||(4636-4745)
scaffold0808 (250-348)||(4090-4188)
[»] scaffold0041 (1 HSPs)
scaffold0041 (426-479)||(46714-46767)


Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 172 - 510
Target Start/End: Original strand, 44282494 - 44282829
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44282494 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 44282593  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44282594 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 44282693  T
Q  372 cctgccctcattaatttttctaacccttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcc 471  Q
    |||||||||||||| |||  |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44282694 cctgccctcattaa-tttagtaa--tttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcc 44282790  T
Q  472 aaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44282791 aaacaacaatcattctgtttaatcaattctgcattattg 44282829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 171 - 401
Target Start/End: Original strand, 40254343 - 40254573
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 270  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40254343 tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 40254442  T
Q  271 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40254443 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 40254542  T
Q  371 ccctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||||    
T  40254543 ccctgccctcattaatttttctaacccttct 40254573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 179 - 401
Target Start/End: Original strand, 14379667 - 14379889
Alignment:
Q  179 gtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagcttt 278  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14379667 gtttggtttggcttttgcaaagtcagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagcttt 14379766  T
Q  279 tatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14379767 tatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccc 14379866  T
Q  379 tcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||    
T  14379867 tcattaatttttctaacccttct 14379889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 166 - 387
Target Start/End: Original strand, 31786693 - 31786914
Alignment:
Q  166 acatatagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttt 265  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31786693 acatatagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttt 31786792  T
Q  266 tcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaat 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31786793 tcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaat 31786892  T
Q  366 tccatccctgccctcattaatt 387  Q
    ||||||||||||||||||||||    
T  31786893 tccatccctgccctcattaatt 31786914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 181 - 395
Target Start/End: Complemental strand, 31686984 - 31686770
Alignment:
Q  181 ttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagctttta 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686984 ttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagctttta 31686885  T
Q  281 tcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccctc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686884 tcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccctc 31686785  T
Q  381 attaatttttctaac 395  Q
    |||||||||||||||    
T  31686784 attaatttttctaac 31686770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 14380649 - 14380761
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14380649 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 14380748  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  14380749 ttctgcattattg 14380761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 31686474 - 31686362
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686474 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 31686375  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  31686374 ttctgcattattg 31686362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 31787192 - 31787304
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31787192 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 31787291  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  31787292 ttctgcattattg 31787304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 40255052 - 40255164
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40255052 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 40255151  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  40255152 ttctgcattattg 40255164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 178 - 380
Target Start/End: Complemental strand, 2443866 - 2443663
Alignment:
Q  178 tgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatattt-aacatgtttggtttggcttttcaaaatagct 276  Q
    |||||||||||||||||| | |||  ||| |||||||  | |||| ||||||||||||| ||| |||| || |||||||||||||||||||| ||| |||    
T  2443866 tgtttggtttggcttttgtacagctggaaacaattctacaacattccaaaagcaattctacaacatttcaatatgtttggtttggcttttcagaattgct 2443767  T
Q  277 tttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatccctgc 376  Q
    | |||||||||||| |||||||   | ||||||||||||||||||| |  |||| ||||||||||||||||||||||||||| || ||||||||| ||||    
T  2443766 tctatcctccaaaaacaattctccataaagctacaattcctagcttatgccttttctagaatcaattctacaccctcaattccatcaattccatcactgc 2443667  T
Q  377 cctc 380  Q
    ||||    
T  2443666 cctc 2443663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 412 - 510
Target Start/End: Original strand, 7474086 - 7474184
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  7474086 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcattttgtttaatcaattctgcattattg 7474184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 17481337 - 17481445
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||||||||||| ||||| ||| ||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  17481337 atttacttgaatttaactatgtccattttagtacttatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattct 17481436  T
Q  502 gcattattg 510  Q
    |||||||||    
T  17481437 gcattattg 17481445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 2442781 - 2442682
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| |||||| ||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  2442781 atttatttttatttagctatgtccattttaataattatacattcaaaaataattttgatcaaaactatccaaacaacattctttctgtttaatcaattct 2442682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 43341825 - 43341717
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| | | | |||||||||||||||    
T  43341825 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacatttagtttgtttaatcaattct 43341726  T
Q  502 gcattattg 510  Q
    |||||||||    
T  43341725 gcattattg 43341717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 510
Target Start/End: Original strand, 13896532 - 13896635
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | ||||||||||||||| |||    
T  13896532 atttctatttagctatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatccaaacaacattcagtttgtttaatcaattctacat 13896630  T
Q  506 tattg 510  Q
    |||||    
T  13896631 tattg 13896635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 510
Target Start/End: Original strand, 14037149 - 14037252
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | ||||||||||||||| |||    
T  14037149 atttctatttagctatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatccaaacaacattcagtttgtttaatcaattctacat 14037247  T
Q  506 tattg 510  Q
    |||||    
T  14037248 tattg 14037252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 35457735 - 35457627
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| |||||| || |||||||||||||||||| ||| | ||||||| |||||||    
T  35457735 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttaataaaaactatccaaacaacattcagtttgtttaaacaattct 35457636  T
Q  502 gcattattg 510  Q
    |||||||||    
T  35457635 gcattattg 35457627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 412 - 510
Target Start/End: Complemental strand, 37640302 - 37640204
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||| ||||||||||||||||||  ||||||||| |||||||||||||||||  ||||| ||||||||||||| ||||||||||    
T  37640302 atttagctatgtccattttagtaattatacattcaaaatcaattttgataaaaactatccaaacaacgttcattttgtttaatcaattatgcattattg 37640204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 426 - 510
Target Start/End: Complemental strand, 16765819 - 16765735
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||| | ||||||||||||||| ||||||||    
T  16765819 attttagtaattatacattcaaaagcaattttgatcaaaactatccaaataacattcagtttgtttaatcaattctacattattg 16765735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 405 - 509
Target Start/End: Original strand, 43695580 - 43695684
Alignment:
Q  405 tatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgca 504  Q
    |||||||||||| | ||||  ||||| ||||||||||||||||||  |||||||||| ||||||||||||||||| | ||||| ||||||||||||| ||    
T  43695580 tatttgtatttagcaatgttcattttagtaattatacattcaaaaacaattttgatcgaaactatccaaacaacatttattctctttaatcaattctaca 43695679  T
Q  505 ttatt 509  Q
    |||||    
T  43695680 ttatt 43695684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 32496759 - 32496651
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||||||||| ||||||||||||||||||  ||||| ||| |||||||| ||||||||| ||| | || |||||||||| |    
T  32496759 atttacttgaatttagctatgtctattttagtaattatacattcaaaaacaatttcgataaaaactattcaaacaacattcagtttgcttaatcaattat 32496660  T
Q  502 gcattattg 510  Q
    |||||||||    
T  32496659 gcattattg 32496651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 510
Target Start/End: Original strand, 19860809 - 19860915
Alignment:
Q  404 ttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgc 503  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||||| |||||| |  ||| | | |  |||||||||||| |||    
T  19860809 ttatttgtatttagctatgtctattttagtaattatacatttaaaaacaattttgatcaaaaatatccacatgacatttagtgggtttaatcaattttgc 19860908  T
Q  504 attattg 510  Q
    |||||||    
T  19860909 attattg 19860915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 37640859 - 37640761
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||  | ||| |||| |||||||||||||||||| |  |||||||||||| || |||||| |  ||||||||||||||||||||||    
T  37640859 tgtttggtttggctttcaagaattgcttctatcctccaaaagcaattatccttgaagctacaaatcttagcttttggctttcctagaatcaattctaca 37640761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 37996718 - 37996816
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||||| ||| |||| ||||||||||||| |||||   || ||||||||||||||| ||| |  ||||||| ||||||||||||||    
T  37996718 tgtttggtttggcttttcataattgcttctatcctccaaaagtaattcaccttaaagctacaattcctaacttttggctttccttgaatcaattctaca 37996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 44003192 - 44003297
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| |||||| |||||||  |||| |||||||||||||||||| ||||||||||||||| |||| |   |||| | | | |||||||||||||||    
T  44003192 atttatttatatttagctatgtccgttttagtaattatacattcaaaattaattttgatcaaaaatatcta---aacatttaatttgtttaatcaattct 44003288  T
Q  502 gcattattg 510  Q
    |||||||||    
T  44003289 gcattattg 44003297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 253 - 348
Target Start/End: Complemental strand, 3739143 - 3739048
Alignment:
Q  253 ttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||||||||| ||| |||| |||| ||||||||||||| |  || |||||||||||||||  || | |||||| ||||||||||||||||    
T  3739143 ttggtttggcttttcataattgcttctatcatccaaaagcaattttccttaaagctacaattcctaatttttgactttcttagaatcaattctaca 3739048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 31047942 - 31047834
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||||||||||| |||||| |||||  |||||||| ||||||||  | ||||||| || |  ||||||||||||   ||| ||||||||||||| |    
T  31047942 atttatttgtatttaattatgtccattttaataattataaattcaaaaacatttttgataaacatcatccaaacaacatctattttgtttaatcaattat 31047843  T
Q  502 gcattattg 510  Q
    |||||||||    
T  31047842 gcattattg 31047834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 7473518 - 7473616
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||||| |||| | ||| |||| |||||||||||| ||||| |  |||||||||||| ||||| ||| |  |||||| |||||||||||||||    
T  7473518 tgtttggtttggtttttaagaattgcttctatcctccaaaaacaattatccttgaagctacaaatcctaacttttggctttccaagaatcaattctaca 7473616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 17480814 - 17480912
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||| ||||||||||| | ||| | || |||||| ||||||||||| |  || ||||||||| |||||||||||  |||| |||||||||||||||||    
T  17480814 tgtttagtttggcttttaagaattgattctatccttcaaaagcaattatctttaaagctacaaatcctagcttctagcttttctagaatcaattctaca 17480912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 437 - 499
Target Start/End: Complemental strand, 33597724 - 33597662
Alignment:
Q  437 tatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    ||||||||||||| ||||||||||||||||||||||||||||  | | | |||||||||||||    
T  33597724 tatacattcaaaaataattttgatcaaaactatccaaacaacctttagtttgtttaatcaatt 33597662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 37551592 - 37551653
Alignment:
Q  284 tccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    ||||||||||||||| |||||||||||||||||||| |||| | ||  ||||||||||||||    
T  37551592 tccaaaagcaattctggttgaagctacaattcctagtttctgagttaactagaatcaattct 37551653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 14033372 - 14033470
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| | || |||||||||||||||||| |   ||||||||||| ||||| ||| |  ||||  ||||||||||||||||    
T  14033372 tgtttggtttggcttttaagaattgattctatcctccaaaagcaattatccatgaagctacaaatcctaacttttggcttttgtagaatcaattctaca 14033470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 43342375 - 43342277
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||| ||||| |||| | ||| | || |||||||||||||||||| |  || ||||||||| | |||||||||  |||| |||||||||||||||||    
T  43342375 tgtttgatttggtttttaagaattgattctatcctccaaaagcaattatccttaaagctacaaattctagcttctagcttttctagaatcaattctaca 43342277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 426 - 475
Target Start/End: Original strand, 16467046 - 16467095
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaac 475  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||||||||    
T  16467046 attttggtaattatacatcaaaaattaattttgatctaaactatccaaac 16467095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 479
Target Start/End: Original strand, 3853861 - 3853913
Alignment:
Q  427 ttttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    ||||| |||||| ||||||||||| |||||||||  |||||||||||||||||    
T  3853861 ttttgataattacacattcaaaagcaattttgattcaaactatccaaacaaca 3853913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 478
Target Start/End: Original strand, 3680728 - 3680786
Alignment:
Q  420 atgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaac 478  Q
    ||||||| |||||||||||||| ||||||||  ||||||||  ||| ||||||||||||    
T  3680728 atgtctaatttggtaattatactttcaaaaggtattttgattcaaattatccaaacaac 3680786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 13892752 - 13892850
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||| |||||||||| | ||| | || |||||||||||||||||| |   ||||||||||| ||||| ||| |  ||||  ||||||||||||||||    
T  13892752 tgtttgatttggcttttaagaattgattctatcctccaaaagcaattatccatgaagctacaaatcctaacttttggcttttgtagaatcaattctaca 13892850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 14032877 - 14032975
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||| |||||||||| | ||| | || |||||||||||||||||| |   ||||||||||| ||||| ||| |  ||||  ||||||||||||||||    
T  14032877 tgtttgatttggcttttaagaattgattctatcctccaaaagcaattatccatgaagctacaaatcctaacttttggcttttgtagaatcaattctaca 14032975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 35458283 - 35458185
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| | || |||| ||||||||||||| |  || || |||||| ||||| |||||  |||| |||||||||||||||||    
T  35458283 tgtttggtttgacttttaagaattgattctatcatccaaaagcaattatccttaaaactacaaatcctaacttctagcttttctagaatcaattctaca 35458185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 479
Target Start/End: Complemental strand, 40951764 - 40951714
Alignment:
Q  429 ttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    ||||||||||||||||||||| |||||||  |  |||||||||||||||||    
T  40951764 ttggtaattatacattcaaaaataattttactttaaactatccaaacaaca 40951714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 44002684 - 44002742
Alignment:
Q  287 aaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||| | ||||||||||||||||||||| | | ||  ||||||||||||||    
T  44002684 aaaagcaattctggatgaagctacaattcctagcttttgagttagctagaatcaattct 44002742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 18511062 - 18511115
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||| |||||||||  |||||||||  ||| |||||||||||||    
T  18511062 attttggtaattatgcattcaaaatcaattttgatttaaattatccaaacaaca 18511115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 173 - 510
Target Start/End: Complemental strand, 36496256 - 36495922
Alignment:
Q  173 gcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 272  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36496256 gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 36496157  T
Q  273 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36496156 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 36496057  T
Q  373 ctgccctcattaatttttctaacccttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcca 472  Q
    ||||||||||||| |||  |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36496056 ctgccctcattaa-tttagtaa--tttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcca 36495960  T
Q  473 aacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36495959 aacaacaatcattctgtttaatcaattctgcattattg 36495922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 172 - 510
Target Start/End: Original strand, 38627538 - 38627873
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38627538 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 38627637  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38627638 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaatttcatc 38627737  T
Q  372 cctgccctcattaatttttctaacccttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcc 471  Q
    |||||||||||||| |||  |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38627738 cctgccctcattaa-tttagtaa--tttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcc 38627834  T
Q  472 aaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38627835 aaacaacaatcattctgtttaatcaattctgcattattg 38627873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 172 - 401
Target Start/End: Original strand, 38843151 - 38843380
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38843151 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 38843250  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38843251 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 38843350  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||    
T  38843351 cctgccctcattaatttttctaacccttct 38843380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 168 - 401
Target Start/End: Complemental strand, 51488705 - 51488472
Alignment:
Q  168 atatagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttc 267  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  51488705 atatagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttc 51488606  T
Q  268 aaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattc 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51488605 aaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattc 51488506  T
Q  368 catccctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||||||    
T  51488505 catccctgccctcattaatttttctaacccttct 51488472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 172 - 401
Target Start/End: Complemental strand, 7593409 - 7593180
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7593409 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 7593310  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7593309 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctccaccctcaattctattaattccatc 7593210  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||    
T  7593209 cctgccctcattaatttttctaacccttct 7593180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 172 - 401
Target Start/End: Complemental strand, 50979441 - 50979212
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50979441 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 50979342  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50979341 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 50979242  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    |||| |||||||||||||||||||||||||    
T  50979241 cctgacctcattaatttttctaacccttct 50979212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 173 - 401
Target Start/End: Complemental strand, 5271708 - 5271480
Alignment:
Q  173 gcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 272  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271708 gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 5271609  T
Q  273 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271608 agcttttatcctccaaaagcaattctagttgaagctacaattcctaacttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 5271509  T
Q  373 ctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||    
T  5271508 ctgccctcattaatttttctaacccttct 5271480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 171 - 401
Target Start/End: Complemental strand, 27000473 - 27000243
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27000473 tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatatttggtttggcttttcaaa 27000374  T
Q  271 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 370  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27000373 atagtttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 27000274  T
Q  371 ccctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||||    
T  27000273 ccctgccctcattaatttttctaacccttct 27000243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 172 - 389
Target Start/End: Original strand, 26821382 - 26821599
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26821382 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 26821481  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26821482 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 26821581  T
Q  372 cctgccctcattaatttt 389  Q
    ||||||||||||||||||    
T  26821582 cctgccctcattaatttt 26821599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 166 - 375
Target Start/End: Original strand, 15353222 - 15353431
Alignment:
Q  166 acatatagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttt 265  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353222 acatatagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttt 15353321  T
Q  266 tcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaat 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353322 tcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaat 15353421  T
Q  366 tccatccctg 375  Q
    ||||||||||    
T  15353422 tccatccctg 15353431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 5271160 - 5271048
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271160 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 5271061  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  5271060 ttctgcattattg 5271048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 15353702 - 15353814
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353702 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 15353801  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  15353802 ttctgcattattg 15353814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 26821879 - 26821991
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26821879 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 26821978  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  26821979 ttctgcattattg 26821991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 50978480 - 50978368
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50978480 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 50978381  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  50978380 ttctgcattattg 50978368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 51488029 - 51487917
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51488029 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 51487930  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  51487929 ttctgcattattg 51487917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 7592859 - 7592747
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7592859 ttctatttatttttatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 7592760  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  7592759 ttctgcattattg 7592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 26999945 - 26999833
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26999945 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactattcaaacaacaatcattctgtttaatcaa 26999846  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  26999845 ttctgcattattg 26999833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 38843859 - 38843971
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38843859 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccgaacaacaatcattctgtttaatcaa 38843958  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  38843959 ttctgcattattg 38843971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 178 - 358
Target Start/End: Original strand, 27575900 - 27576081
Alignment:
Q  178 tgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatattt-aacatgtttggtttggcttttcaaaatagct 276  Q
    |||||||||||||||||| | ||| |||| |||||||  | |||| ||||||||||||| ||| |||| || |||||||||||| ||||||| ||| |||    
T  27575900 tgtttggtttggcttttgtacagctagaagcaattctacaacattccaaaagcaattctacaacatttcaatatgtttggtttgacttttcataattgct 27575999  T
Q  277 tttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattc 358  Q
    | ||||||||||||||||||||   | ||| |||||||  |||||||| ||||| |||||||||||||||||||||||||||    
T  27576000 tctatcctccaaaagcaattctccataaagttacaatttttagcttctgacttttctagaatcaattctacaccctcaattc 27576081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 31100013 - 31099905
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||| |||    
T  31100013 atttatttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaaccatccaaacaacattcattctctttaatcaactct 31099914  T
Q  502 gcattattg 510  Q
     ||||||||    
T  31099913 acattattg 31099905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 501
Target Start/End: Original strand, 27576681 - 27576780
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| |||||| ||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||    
T  27576681 atttatttttatttagctatgtccattttagtaattatacattcaaaagcaaatttgatcaaaactatccaaacaacattcattctgtttaatcaattct 27576780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 42137249 - 42137140
Alignment:
Q  402 atttatttgtatttaactatgtctattttgg-taattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattc 500  Q
    ||||||||||||||| ||||||  |||||   |||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  42137249 atttatttgtatttagctatgttcatttttaataattatacattcaaaagcaattttgatcaaaactatccaaacaacattcaatctgtttaatcaattc 42137150  T
Q  501 tgcattattg 510  Q
    ||||||||||    
T  42137149 tgcattattg 42137140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 399 - 509
Target Start/End: Original strand, 45179870 - 45179980
Alignment:
Q  399 tctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaat 498  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||| ||||  |||||||||||||||| || |||||||| |||||| |||||||||||    
T  45179870 tctatttatttgtatttagctatgtccattttagtaattatacatttaaaaacaattttgatcaaaactgtcaaaacaacattcattccgtttaatcaat 45179969  T
Q  499 tctgcattatt 509  Q
    ||| |||||||    
T  45179970 tctacattatt 45179980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 406 - 510
Target Start/End: Original strand, 35606868 - 35606972
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||| || ||||||| |||||||||||||||| ||    
T  35606868 atttctatttagctatgtcaattttcgtaattatacattcaaaagcaattttgatcaaaactattcaaataaaaatcattatgtttaatcaattctgtat 35606967  T
Q  506 tattg 510  Q
    |||||    
T  35606968 tattg 35606972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 406 - 510
Target Start/End: Original strand, 46408024 - 46408127
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||||||||||  ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||||||    
T  46408024 atttctatttaactatgttcattttagtaattatacattcaaaagcaattttgat-aaaactatccaaacaacattcagtttgtttaatcaattctgcat 46408122  T
Q  506 tattg 510  Q
    |||||    
T  46408123 tattg 46408127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 510
Target Start/End: Original strand, 50031388 - 50031486
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||| | ||||||||||||| ||||||||||    
T  50031388 atttagctatgtccattttagtaattatatattcaaaagtaattttgataaaaactatccaaacaacattcagtatgtttaatcaattatgcattattg 50031486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 401 - 510
Target Start/End: Original strand, 6706666 - 6706775
Alignment:
Q  401 tatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattc 500  Q
    |||||| ||| ||||| ||||||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||||| | | | ||||||||||||||    
T  6706666 tatttacttgaatttagctatgtccattttagtaattatacgttcaaaagcaattttgataaaaactatccaaacaacatttagtttgtttaatcaattc 6706765  T
Q  501 tgcattattg 510  Q
    ||||||||||    
T  6706766 tgcattattg 6706775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 4484782 - 4484674
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| |||||| |||||| ||||||||||||||||||| ||||||| | |||||||||||||||||| ||| | | |||||||||||||    
T  4484782 atttacttgaatttagctatgtttattttagtaattatacattcaaaagcaattttgttaaaaactatccaaacaacattcaatttatttaatcaattct 4484683  T
Q  502 gcattattg 510  Q
    |||||||||    
T  4484682 gcattattg 4484674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 505
Target Start/End: Complemental strand, 11050679 - 11050575
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcc-aaacaacaatcattctgtttaatcaattc 500  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||||||||||| |||||||| | | | ||||||||||||||    
T  11050679 atttgtttgtatttaactatgtcctttttagtaattatacattcaaaagcaattttgatcaaaactatccaaaacaacatttagtttgtttaatcaattc 11050580  T
Q  501 tgcat 505  Q
    |||||    
T  11050579 tgcat 11050575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 408 - 508
Target Start/End: Complemental strand, 46033282 - 46033182
Alignment:
Q  408 ttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcatta 507  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||  ||||||||| |||||||||||||||||| ||| | ||||||||||||| |||||||    
T  46033282 ttgtatttagctatgtcaattttagtaattatacattcaaaatcaattttgataaaaactatccaaacaacattcaatttgtttaatcaattatgcatta 46033183  T
Q  508 t 508  Q
    |    
T  46033182 t 46033182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 47655255 - 47655147
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||||||||||| ||||| ||||||||||||||||||  ||||||||| |||| ||| ||||||||| ||| | |||||||||||||||    
T  47655255 atttacttgaatttaactatgtccattttagtaattatacattcaaaaacaattttgataaaaattattcaaacaacattcagtttgtttaatcaattct 47655156  T
Q  502 gcattattg 510  Q
    |||||||||    
T  47655155 gcattattg 47655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 402 - 477
Target Start/End: Original strand, 27067670 - 27067745
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaa 477  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||    
T  27067670 atttatttgtatttaactatgtctattttagtaattatagattcaaaagtgattttgatcaaaacaatccaaacaa 27067745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 402 - 505
Target Start/End: Original strand, 41512692 - 41512795
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| || |||||||||||||||  ||||||||||||||| |||||||||||| ||| | ||||| |||||||||    
T  41512692 atttatttgtatttagctatgtccattttagtgattatacattcaaaatcaattttgatcaaaacaatccaaacaacattcagtttgttttatcaattct 41512791  T
Q  502 gcat 505  Q
    ||||    
T  41512792 gcat 41512795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 403 - 501
Target Start/End: Original strand, 11829559 - 11829657
Alignment:
Q  403 tttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||| ||||||  |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  11829559 tttatttttatttagatatgtccattttagtaattatacatttaaaagcaattttgatcaaaactatccaaacgacattcattttgtttaatcaattct 11829657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 421 - 510
Target Start/End: Complemental strand, 16342999 - 16342910
Alignment:
Q  421 tgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  16342999 tgtccattttagtaattatacgttcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcattattg 16342910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 7385764 - 7385875
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaa---ctatccaaacaacaatcattctgtttaatcaat 498  Q
    ||||| ||| ||||| |||| || ||||| ||||||||||||||||||| ||||||||| ||||   |||||||||||||| ||| | ||||||||||||    
T  7385764 atttacttgaatttagctatctccattttagtaattatacattcaaaagcaattttgataaaaaaaactatccaaacaacattcagtttgtttaatcaat 7385863  T
Q  499 tctgcattattg 510  Q
    ||||||||||||    
T  7385864 tctgcattattg 7385875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 348
Target Start/End: Complemental strand, 47655987 - 47655888
Alignment:
Q  249 atgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||||||||||| | ||| | || |||||||||||||||||| |  || ||||||||| ||||||||||| ||||| |||||||||||||||||    
T  47655987 atgtttggtttggcttttaagaattgattctatcctccaaaagcaattatccttaaagctacaaatcctagcttctaacttttctagaatcaattctaca 47655888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 426 - 500
Target Start/End: Complemental strand, 50521143 - 50521069
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattc 500  Q
    ||||| ||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  50521143 attttagtaattatatattcaaaaacaattttgatcaaaactatccaaacaacattcattctgtttaattaattc 50521069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 427 - 510
Target Start/End: Original strand, 1763271 - 1763354
Alignment:
Q  427 ttttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||| ||||||||||||||||||  ||||||||||||||||||| ||||||||  ||||| | |||||||||||| ||||||||    
T  1763271 ttttagtaattatacattcaaaaacaattttgatcaaaactatctaaacaacatccattccgcttaatcaattctacattattg 1763354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 432 - 510
Target Start/End: Original strand, 44740674 - 44740752
Alignment:
Q  432 gtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||||||| |||| |||||||||| |||| ||||||||||||| ||| | ||||||||||||||| ||||||||    
T  44740674 gtaattatacatttaaaaataattttgataaaaattatccaaacaacattcagtttgtttaatcaattctacattattg 44740752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 510
Target Start/End: Original strand, 24076060 - 24076120
Alignment:
Q  450 gtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||    
T  24076060 gtaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattctacattattg 24076120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 11051262 - 11051192
Alignment:
Q  248 catgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattccta 318  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| ||||| | |||||| ||||||||||||    
T  11051262 catgtttggtttgacttttcaaaattgcttctatcctccaaaaacaattatggttgaatctacaattccta 11051192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 13509487 - 13509409
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgat-caaaactatccaaacaaca 479  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  13509487 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaaactatccaaacaaca 13509409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 415 - 509
Target Start/End: Original strand, 49431179 - 49431272
Alignment:
Q  415 taactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattatt 509  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||| ||| |||| ||| |||| | ||| |||||||| |||| |||||||||    
T  49431179 taactatgtccattttagtaattatatattcaaaagtaattttgatcgaaattatctaaataacatttatt-tgtttaataaattatgcattatt 49431272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 1762251 - 1762313
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||||| ||||||||||||||||||| ||| | | ||| ||||||||||||||    
T  1762251 ctccaaaagcaattctggttgaagctacaattcctaacttttaagtttactagaatcaattct 1762313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 6706132 - 6706230
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||| ||||||||||| | ||| | || |||||||||||| ||||| |  || ||||||||| |||||||||||  |||| |||||||||||||||||    
T  6706132 tgtttagtttggcttttaagaattgattctatcctccaaaaacaattatccttaaagctacaaatcctagcttctagcttttctagaatcaattctaca 6706230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 13510038 - 13509940
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||| |||||| | ||| | || |||||||||||||||||| |  || |||||| || |||||||||||  |||| |||||||||||||||||    
T  13510038 tgtttggtttagcttttaagaattgattctatcctccaaaagcaattatccttaaagctataaatcctagcttctagcttttctagaatcaattctaca 13509940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 11829075 - 11829172
Alignment:
Q  248 catgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    ||||||||||||| ||||| | ||| |||| |||||||||||||||||||| | ||||| || |||||||| ||| | | ||  ||||||||||||||    
T  11829075 catgtttggtttgccttttaagaattgcttctatcctccaaaagcaattctggatgaaggtataattcctaacttttgagttaactagaatcaattct 11829172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 15884201 - 15884254
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||| |||||||||  |||||||||| |||||||||||||||||    
T  15884201 attttggtaattatgcattcaaaatcaattttgatccaaactatccaaacaaca 15884254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 46406421 - 46406519
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| | || |||||||||||||||||| |   ||||||||||| || |||||| |  ||||  ||||||||||||||||    
T  46406421 tgtttggtttggcttttaagaattgattctatcctccaaaagcaattatccatgaagctacaaatcttagcttttggcttttgtagaatcaattctaca 46406519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 478
Target Start/End: Complemental strand, 46581341 - 46581283
Alignment:
Q  420 atgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaac 478  Q
    ||||||| ||| |||||||||||||||||| ||||||||||  ||| ||||||||||||    
T  46581341 atgtctaattttgtaattatacattcaaaaataattttgattcaaattatccaaacaac 46581283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 35604814 - 35604912
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||| |||| ||||| | ||| |||| |||||||||||| ||||| |  |||||||||||| |  |||||| | |||||  ||||||||||||||||    
T  35604814 tgtttgatttgacttttaagaattgcttctatcctccaaaaacaattatccttgaagctacaaatattagcttttgacttttgtagaatcaattctaca 35604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 21324828 - 21324873
Alignment:
Q  56 tgatgttgaattaatatgaactgtcacatcttcatttaacgtgtca 101  Q
    |||||| ||||| | ||||||| |||||||||||||||||||||||    
T  21324828 tgatgtggaattcacatgaactatcacatcttcatttaacgtgtca 21324873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 23628856 - 23628803
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||| ||||||||| ||||||||||||||||||  |||| | ||||||||||    
T  23628856 attttgataattatactttcaaaagtaattttgattcaaaccacccaaacaaca 23628803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 46033781 - 46033716
Alignment:
Q  248 catgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaat 313  Q
    |||||||| |||| ||||||||||| |||| |||||| ||||| |||||||  |||||| ||||||    
T  46033781 catgtttgatttgacttttcaaaattgcttctatccttcaaaaacaattctcattgaagttacaat 46033716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 478
Target Start/End: Original strand, 41904 - 41956
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaac 478  Q
    |||||||||||||| || ||||||  |||||||||| || |||||||||||||    
T  41904 attttggtaattatgcactcaaaataaattttgatccaagctatccaaacaac 41956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 479
Target Start/End: Complemental strand, 35569344 - 35569300
Alignment:
Q  435 attatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||  |||||||||  |||||||||||||||||    
T  35569344 attatacattcaaaatcaattttgattcaaactatccaaacaaca 35569300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 300; Significance: 1e-168; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 171 - 510
Target Start/End: Original strand, 47696998 - 47697346
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 270  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47696998 tagcctctgtttggtttggcttttgcaaagccagaatcaattctgaagcatttcaaaagcaattctgcaatatttaacatgtttggtttgccttttcaaa 47697097  T
Q  271 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47697098 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 47697197  T
Q  371 ccctgccctcattaatttttcta-accc--------ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatc 461  Q
    ||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47697198 ccctgccctcattaatttttctacacccttagtaatttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatc 47697297  T
Q  462 aaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47697298 aaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 47697346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 172 - 401
Target Start/End: Complemental strand, 51129220 - 51128991
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51129220 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 51129121  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51129120 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 51129021  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||    
T  51129020 cctgccctcattaatttttctaacccttct 51128991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 172 - 401
Target Start/End: Complemental strand, 47141607 - 47141378
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47141607 agcctctgtttggtttggcatttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 47141508  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47141507 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcttagaatcaattctacaccctcaattctattaattccatc 47141408  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||    
T  47141407 cctgccctcattaatttttctaacccttct 47141378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 171 - 401
Target Start/End: Original strand, 1527530 - 1527760
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1527530 tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttcaaa 1527629  T
Q  271 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 370  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1527630 ctagcttttatcctccgaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 1527729  T
Q  371 ccctgccctcattaatttttctaacccttct 401  Q
     ||||||||||||||||||||||||||||||    
T  1527730 tcctgccctcattaatttttctaacccttct 1527760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 171 - 401
Target Start/End: Original strand, 52691926 - 52692156
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  52691926 tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttaaaa 52692025  T
Q  271 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 370  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52692026 atagattttatcctccaaaagcaattctagttgaagctacaattcctaacttcttactttcctagaatcaattctacaccctcaattctattaattccat 52692125  T
Q  371 ccctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||||    
T  52692126 ccctgccctcattaatttttctaacccttct 52692156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 172 - 401
Target Start/End: Original strand, 38469068 - 38469297
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  38469068 agcctctgtttggtttggcttttgcaaagccagaatcaattatggagcatttcaaaagcaattctgcaatatttaacatgtttggtttaccttttcaaaa 38469167  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38469168 tagtttttatcctccaaaagcaattctagttgaagctacaattcttagcttcttactttcctataatcaattctacaccctcaattctattaattccatc 38469267  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||    
T  38469268 cctgccctcattaatttttctaacccttct 38469297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 1528050 - 1528162
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1528050 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 1528149  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  1528150 ttctgcattattg 1528162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 47140904 - 47140792
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47140904 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 47140805  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  47140804 ttctgcattattg 47140792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 51124924 - 51124812
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51124924 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 51124825  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  51124824 ttctgcattattg 51124812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 38469725 - 38469837
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38469725 ttctatttatttttatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 38469824  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  38469825 ttctgcattattg 38469837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 52693084 - 52693196
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52693084 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 52693183  T
Q  498 ttctgcattattg 510  Q
    ||||| |||||||    
T  52693184 ttctgtattattg 52693196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 399 - 510
Target Start/End: Original strand, 28884218 - 28884329
Alignment:
Q  399 tctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaat 498  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  28884218 tctatttatttgtatttaactatgtccatttcagtaattatacattcaaaaataattttgattaaaactatccaaacaacattcattctctttaatcaat 28884317  T
Q  499 tctgcattattg 510  Q
    | | ||||||||    
T  28884318 tatacattattg 28884329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 30811251 - 30811359
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  30811251 atttatttgtatttagctatgtccattttagtaattatacattcaaaatcaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattct 30811350  T
Q  502 gcattattg 510  Q
    | |||||||    
T  30811351 gaattattg 30811359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 33329515 - 33329407
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||| |||||||||||||||||  |||| |||||||||||||||    
T  33329515 atttatttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcgaaactatccaaacaacatccattttgtttaatcaattct 33329416  T
Q  502 gcattattg 510  Q
     ||||||||    
T  33329415 acattattg 33329407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 39252024 - 39252132
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  39252024 atttacttgaatttaactatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattct 39252123  T
Q  502 gcattattg 510  Q
    |||||||||    
T  39252124 gcattattg 39252132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 48181608 - 48181716
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  48181608 atttacttgaatttagctatgtccatttcggtaattatatattcaaaagtaattttgataaaaactatccaaacaacattcagtttgtttaatcaattct 48181707  T
Q  502 gcattattg 510  Q
    |||||||||    
T  48181708 gcattattg 48181716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 419 - 508
Target Start/End: Original strand, 44329195 - 44329284
Alignment:
Q  419 tatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattat 508  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||    
T  44329195 tatgtcaattttagtaattatacattcaaaagtaattttgatcaaaactatccaaacaacattcattctatttaatcaattttacattat 44329284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 33025339 - 33025231
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||||||||| ||||||||| ||||||||  ||||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  33025339 atttacttgaatttagctatgtctattttagtaattatagattcaaaaacaattttgataaaaactatccaaacaacattcagtttgtttaatcaattct 33025240  T
Q  502 gcattattg 510  Q
    |||||||||    
T  33025239 gcattattg 33025231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 48254052 - 48253944
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | ||||||||||||| |    
T  48254052 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaatttt 48253953  T
Q  502 gcattattg 510  Q
    |||||||||    
T  48253952 gcattattg 48253944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 506
Target Start/End: Original strand, 11264250 - 11264344
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcatt 506  Q
    ||||| ||||||  ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  11264250 atttagctatgttcattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcattttgtttaatcaattctgcatt 11264344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 50392376 - 50392268
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| || || ||||||||||||||||||  |||||||||||||| ||||||||||| | ||| | |||||||||||||||    
T  50392376 atttatttgtatttagctatgtccatattagtaattatacattcaaaatcaattttgatcaaaattatccaaacaatattcaatttgtttaatcaattct 50392277  T
Q  502 gcattattg 510  Q
     ||||||||    
T  50392276 acattattg 50392268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 33025896 - 33025798
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||  || ||||||||||||||||||| |  |||||||| |||||||||||||    
T  33025896 tgtttggtttgacttttcaaaattgcttctatcctccaaaagcaattctccttaaagctacaattcctagcttttggctttcctataatcaattctaca 33025798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 39267216 - 39267119
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||| | ||||||||||||||||| |||||||| | | | |||||||||||||    
T  39267216 atttatttgtatttagctatgtccattttagtaattatacattcaaaagcagttttgatcaaaactatcaaaacaacatttagtttgtttaatcaatt 39267119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 42074877 - 42074985
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| |||||||||| |||||||| ||||||||||||||||||  ||||||||| | |||||||||||||||| ||| | ||||||||||||| |    
T  42074877 atttacttgaatttaactatctctattttagtaattatacattcaaaatcaattttgataagaactatccaaacaacattcagtttgtttaatcaattat 42074976  T
Q  502 gcattattg 510  Q
    ||| |||||    
T  42074977 gcactattg 42074985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 406 - 510
Target Start/End: Complemental strand, 44610385 - 44610282
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||  |||||||||| |||||||||||||||||  ||||| |||||||||||| | |||    
T  44610385 atttgtatttagctatgtccattttagtaattatacattcaaaatcaattttgatc-aaactatccaaacaacatccattccgtttaatcaattttacat 44610287  T
Q  506 tattg 510  Q
    |||||    
T  44610286 tattg 44610282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 51230247 - 51230355
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| |||||| |||||| ||||||||||||||||||  || |||||| |||||||||||||||||| ||| | ||||||||||||| |    
T  51230247 atttacttgaatttagctatgtttattttagtaattatacattcaaaatcaaatttgataaaaactatccaaacaacattcagtttgtttaatcaatttt 51230346  T
Q  502 gcattattg 510  Q
    |||||||||    
T  51230347 gcattattg 51230355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 42074392 - 42074490
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||||| ||| |||| |||||||||||| |||||||  || ||||||||||||||||||| | ||||| || ||||||||||||||    
T  42074392 tgtttggtttggcttttcagaattgcttctatcctccaaaaacaattctccttaaagctacaattcctagcttttgactttgctcgaatcaattctaca 42074490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 40237799 - 40237907
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| |||||| ||||||| |||||  |||||||||||||||||| ||||||||| |||||||| ||||||||| |||| ||  ||||||||||||    
T  40237799 atttatttttatttagctatgtccattttaataattatacattcaaaagcaattttgataaaaactattcaaacaacattcatcctaattaatcaattct 40237898  T
Q  502 gcattattg 510  Q
     | ||||||    
T  40237899 acgttattg 40237907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 403 - 479
Target Start/End: Complemental strand, 53686640 - 53686564
Alignment:
Q  403 tttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||| ||| ||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  53686640 tttacttgaatttagctatgtctattttagtaattatatattcaaaagtaattttgataaaaactatccaaacaaca 53686564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 349
Target Start/End: Complemental strand, 53687475 - 53687376
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacac 349  Q
    ||||||||||| ||||||| ||| |||| |||||||||||||||||||| ||| |||||||||||||||| || |  |||| ||| ||||||||||||||    
T  53687475 tgtttggtttgacttttcataattgcttctatcctccaaaagcaattcttgttaaagctacaattcctaggttttggcttttctaaaatcaattctacac 53687376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 401 - 499
Target Start/End: Original strand, 40244040 - 40244138
Alignment:
Q  401 tatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||| ||||  ||||||||| |||||||||||||||| | | ||| | |||||||||||    
T  40244040 tatttatatgtatttaaccatgtccattttggtaattatacatttaaaaacaattttgattaaaactatccaaacaatatttattatatttaatcaatt 40244138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 45488660 - 45488550
Alignment:
Q  400 ctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||||  |||||||||||||| |||||| |  ||| | | |  ||||||||||||    
T  45488660 ctatttatttgtatttagctatgtctattttagtacttatacattcaaaaacaattttgatcaaaaatatccacatgacatttagtgggtttaatcaatt 45488561  T
Q  500 ctgcattattg 510  Q
     ||||||||||    
T  45488560 ttgcattattg 45488550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 51229727 - 51229825
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||| |||||||||||| |||| ||||||||||||  ||||||  || ||||||||||||||| ||| |  ||||||||||||||||||||||    
T  51229727 tgtttggtttagcttttcaaaattgcttctatcctccaaaaataattctccttaaagctacaattcctaacttttggctttcctagaatcaattctaca 51229825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 510
Target Start/End: Original strand, 41536321 - 41536426
Alignment:
Q  405 tatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgca 504  Q
    ||||||||||||  |||||| ||||| ||||||||| ||||||||  ||||||||||||||| |||||||||||| | | |  |||||||||||||| ||    
T  41536321 tatttgtatttagttatgtcaattttagtaattatatattcaaaaacaattttgatcaaaaccatccaaacaacatttagttcgtttaatcaattctaca 41536420  T
Q  505 ttattg 510  Q
    ||||||    
T  41536421 ttattg 41536426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 418 - 510
Target Start/End: Original strand, 42275090 - 42275187
Alignment:
Q  418 ctatgtctattttggtaattatacattcaaaagtaattttgat-----caaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||| ||||| ||||||||||||||||||| |||||||||      |||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  42275090 ctatgtccattttagtaattatacattcaaaagcaattttgataaaaaaaaaactatccaaacaacattcagtttgtttaatcaattctgcattattg 42275187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 5104822 - 5104752
Alignment:
Q  439 tacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattatt 509  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||| ||| |||||||    
T  5104822 tacattcaaaagtaattttgatcaaaattattcaaacaacattcattttgtttaatcaaatctacattatt 5104752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 419 - 510
Target Start/End: Original strand, 45151168 - 45151263
Alignment:
Q  419 tatgtctattttggtaattatacattcaaaagtaattttgat----caaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||| ||||| ||||||||||||||||||| |||||||||     |||||||||||||||||| | ||| ||||||||||||||| ||||||||    
T  45151168 tatgtccattttagtaattatacattcaaaagcaattttgataaaaaaaaactatccaaacaacatttattttgtttaatcaattctacattattg 45151263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 51407464 - 51407533
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctag 319  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||||| | ||||||||||||||| ||||    
T  51407464 tgtttggtttggcttttcagaattgcttctatcctccaaaagcaattttggttgaagctacaatttctag 51407533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 48181071 - 48181167
Alignment:
Q  252 tttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||| | ||| | ||| |||| ||||||||||||||||||||  || || |||||||||||||||| |  ||||||||||||||||||||||    
T  48181071 tttggtttgacattttagaattgcttctatcctccaaaagcaattctccttaaaactacaattcctagcttttggctttcctagaatcaattctaca 48181167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 11263709 - 11263787
Alignment:
Q  268 aaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattcta 346  Q
    ||||| |||| |||||||||||||||||| |  |||||||||||| ||||||||| |  ||||||||||||||||||||    
T  11263709 aaaattgcttctatcctccaaaagcaattatccttgaagctacaaatcctagcttttggctttcctagaatcaattcta 11263787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 42274518 - 42274616
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||| |||||||||| | ||| | || ||||||||||||||||||||  || ||| ||||||||||||||| |  ||||| ||||||||||||||||    
T  42274518 tgtttgatttggctttttagaattgattctatcctccaaaagcaattctccttaaagttacaattcctagcttttggctttcatagaatcaattctaca 42274616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 45150598 - 45150696
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| | || |||||||||||| ||||| |  |||||||||||| ||||||||| |   |||||||||||||||||||||    
T  45150598 tgtttggtttggcttttaagaattgtttctatcctccaaaaacaattatccttgaagctacaaatcctagcttttggttttcctagaatcaattctaca 45150696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 346
Target Start/End: Complemental strand, 48254602 - 48254506
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattcta 346  Q
    ||||||||||| ||||| | ||| | || |||||||||||||||||| |  || ||||||||| |||||||||||  |||| |||||||||||||||    
T  48254602 tgtttggtttgacttttaagaattgattatatcctccaaaagcaattatccttaaagctacaaatcctagcttctagcttttctagaatcaattcta 48254506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 28182370 - 28182468
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| |||| |||||||||| ||||||| |  || |||||| |||||||| ||| |  |||||||| |||||||||||||    
T  28182370 tgtttggtttggctttttagaattgcttctatcctccaacagcaattatccttaaagctaaaattcctaacttttggctttcctataatcaattctaca 28182468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 30809842 - 30809904
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||||| | ||||||||||||||||||||| | | ||  ||||||||||||||    
T  30809842 ctccaaaagcaattctggatgaagctacaattcctagcttttgagttagctagaatcaattct 30809904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 31813401 - 31813499
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||| ||||||||||| | ||| | || |||||||||||||||||| |   ||||||||||| ||||||||| |  ||||  ||||||||||||||||    
T  31813401 tgtttagtttggcttttaagaattgattctatcctccaaaagcaattatccatgaagctacaaatcctagcttttggcttttgtagaatcaattctaca 31813499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 44610889 - 44610827
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||||| ||||||||||||||| ||||||| | | |||  |||||||||||||    
T  44610889 ctccaaaagcaattctggttgaagctacaatttctagcttttgagtttattagaatcaattct 44610827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 441 - 498
Target Start/End: Original strand, 52764662 - 52764719
Alignment:
Q  441 cattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaat 498  Q
    ||||| |||| |||||||||||||| ||| ||||||||| || |||||||||||||||    
T  52764662 cattctaaagcaattttgatcaaaattattcaaacaacattcgttctgtttaatcaat 52764719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 479
Target Start/End: Complemental strand, 31619028 - 31618984
Alignment:
Q  435 attatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||    
T  31619028 attatacattcaaaattaattttgattcaaactatccaaacaaca 31618984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 478
Target Start/End: Complemental strand, 14651257 - 14651199
Alignment:
Q  420 atgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaac 478  Q
    ||||||| |||||||||||||| ||||||||  ||||||||  ||| ||||||||||||    
T  14651257 atgtctaatttggtaattatactttcaaaagctattttgattcaaattatccaaacaac 14651199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 44328692 - 44328754
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||| | | ||||||||||||||||||||| | | ||  ||||||||||||||    
T  44328692 ctccaaaagcaattttggctgaagctacaattcctagcttttgagttaactagaatcaattct 44328754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 37698539 - 37698486
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    ||||||||||||||||||  ||||  |||||||||  |||||||||||||||||    
T  37698539 attttggtaattatacatgtaaaatcaattttgattcaaactatccaaacaaca 37698486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 42475657 - 42475714
Alignment:
Q  423 tctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaa 480  Q
    |||||||||||||||||||||  ||||| |||||||||  ||  ||||||||||||||    
T  42475657 tctattttggtaattatacatctaaaagcaattttgattcaatgtatccaaacaacaa 42475714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 479
Target Start/End: Original strand, 23496284 - 23496328
Alignment:
Q  435 attatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||  |||||||||  |||||||||||||||||    
T  23496284 attatacattcaaaatcaattttgattcaaactatccaaacaaca 23496328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 172 - 510
Target Start/End: Original strand, 33114956 - 33115291
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33114956 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttttaaaa 33115055  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33115056 tagtttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 33115155  T
Q  372 cctgccctcattaatttttctaacccttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcc 471  Q
    |||||||||||||| |||  |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33115156 cctgccctcattaa-tttagtaa--tttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcc 33115252  T
Q  472 aaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33115253 aaacaacaatcattctgtttaatcaattctgcattattg 33115291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 173 - 510
Target Start/End: Original strand, 14082814 - 14083148
Alignment:
Q  173 gcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 272  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  14082814 gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctacaatatttaacatgtttggtttgactttttaaaat 14082913  T
Q  273 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14082914 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 14083013  T
Q  373 ctgccctcattaatttttctaacccttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcca 472  Q
    ||||||||||||| |||  |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14083014 ctgccctcattaa-tttagtaa--tttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatcca 14083110  T
Q  473 aacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14083111 aacaacaatcattctgtttaatcaattctgcattattg 14083148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 173 - 401
Target Start/End: Complemental strand, 29542646 - 29542418
Alignment:
Q  173 gcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 272  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29542646 gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 29542547  T
Q  273 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29542546 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 29542447  T
Q  373 ctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||    
T  29542446 ctgccctcattaatttttctaacccttct 29542418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 171 - 401
Target Start/End: Complemental strand, 3261045 - 3260815
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 270  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3261045 tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttcaaa 3260946  T
Q  271 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3260945 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 3260846  T
Q  371 ccctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||||    
T  3260845 ccctgccctcattaatttttctaacccttct 3260815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 172 - 401
Target Start/End: Original strand, 42663356 - 42663585
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42663356 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttgacttttcaaaa 42663455  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42663456 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 42663555  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||    
T  42663556 cctgccctcattaatttttctaacccttct 42663585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 29541975 - 29541863
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29541975 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 29541876  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  29541875 ttctgcattattg 29541863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 3260491 - 3260379
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3260491 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 3260392  T
Q  498 ttctgcattattg 510  Q
    ||||| |||||||    
T  3260391 ttctgtattattg 3260379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 42663919 - 42664031
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42663919 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaaataattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 42664018  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  42664019 ttctgcattattg 42664031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 399 - 510
Target Start/End: Complemental strand, 33082505 - 33082394
Alignment:
Q  399 tctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaat 498  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||||    
T  33082505 tctatttatttgtatttaactatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacatccattctatttaatcaat 33082406  T
Q  499 tctgcattattg 510  Q
    ||| ||||||||    
T  33082405 tctacattattg 33082394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 33387033 - 33386925
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  33387033 atttatttgtatttagctatgtccattttagtaattatacattcaaaaacaattttgatcaaaactatccaaacaacattcattctatttaatcaattct 33386934  T
Q  502 gcattattg 510  Q
     ||||||||    
T  33386933 acattattg 33386925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 10900676 - 10900784
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| ||| | ||||||||||||| |    
T  10900676 atttatttgtatttagctatgtccattttagtaattatacattcaaaattaattttgatcaaaattatccaaacaacattcagtttgtttaatcaattat 10900775  T
Q  502 gcattattg 510  Q
    |||||||||    
T  10900776 gcattattg 10900784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 501
Target Start/End: Original strand, 2526848 - 2526947
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| ||||||  |||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2526848 atttatttttatttagttatgtctattttagtaattatacattcaagagcaattttgatcaaaactatccaaacaacattcattctgtttaatcaattct 2526947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 8958057 - 8957949
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| |||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  8958057 atttacttgaatttagctatatctattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattct 8957958  T
Q  502 gcattattg 510  Q
    |||||||||    
T  8957957 gcattattg 8957949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 406 - 510
Target Start/End: Complemental strand, 27738110 - 27738006
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||||||    
T  27738110 atttctatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattctgcat 27738011  T
Q  506 tattg 510  Q
    |||||    
T  27738010 tattg 27738006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 31905981 - 31906089
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  31905981 atttacttgaatttatctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattct 31906080  T
Q  502 gcattattg 510  Q
    |||||||||    
T  31906081 gcattattg 31906089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 40979959 - 40980067
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||||||| | | | ||||||||||||| |    
T  40979959 atttatttgtatttagctatgtccattttagtaattatacattcaaaatcaattttgatcaaaactatccaaacaacatttaatttgtttaatcaatttt 40980058  T
Q  502 gcattattg 510  Q
    |||||||||    
T  40980059 gcattattg 40980067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 412 - 510
Target Start/End: Original strand, 37046116 - 37046214
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||  |||||||||||| ||| | ||||||||||||||||||||||||    
T  37046116 atttagctatgtctattttagtaattatacattcaaaagcaattttgatcaaaatcatccaaacaacattcagtttgtttaatcaattctgcattattg 37046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 41741777 - 41741669
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| |||||| || |||||||||||||||||| ||| | |||||||||||||||    
T  41741777 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttaataaaaactatccaaacaacattcagtttgtttaatcaattct 41741678  T
Q  502 gcattattg 510  Q
    |||||||||    
T  41741677 gcattattg 41741669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 406 - 499
Target Start/End: Complemental strand, 7071577 - 7071484
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| | |||||||||||||    
T  7071577 atttctatttacctatgtccattttggtaattatacattcaaaaacaattttgatcaaaactatccaaacaacattcagtttgtttaatcaatt 7071484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 510
Target Start/End: Original strand, 33232993 - 33233096
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | ||||||||| |||||||||    
T  33232993 atttctatttagctatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatccaaacaacattcagtttgtttaatcgattctgcat 33233091  T
Q  506 tattg 510  Q
    |||||    
T  33233092 tattg 33233096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 412 - 510
Target Start/End: Complemental strand, 25256384 - 25256286
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||| ||||||||   |||| |||||||||||||| ||||||||    
T  25256384 atttaactatgtccattttagtaattatacattcaaaaacaattttgatcaaaactatctaaacaacatcaattccgtttaatcaattctacattattg 25256286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 412 - 510
Target Start/End: Complemental strand, 25320173 - 25320075
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||| ||||||||   |||| |||||||||||||| ||||||||    
T  25320173 atttaactatgtccattttagtaattatacattcaaaaacaattttgatcaaaactatctaaacaacatcaattccgtttaatcaattctacattattg 25320075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 4295474 - 4295571
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    ||||| |||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||  ||||||||||||| ||| | |||||||||||||    
T  4295474 atttacttgtatttaactctgtccattttagtaattatacattcaaaaataattttgatcaaacatatccaaacaacattcaatttgtttaatcaatt 4295571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 20069241 - 20069133
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||| ||||||||| ||||||  |||| ||| ||||||||||||||  |||||||||||||||||||||||||||| |||   ||||||||||||| |    
T  20069241 atttatatgtatttaattatgtcggttttagtacttatacattcaaaaacaattttgatcaaaactatccaaacaacattcaacgtgtttaatcaatttt 20069142  T
Q  502 gcattattg 510  Q
    |||||||||    
T  20069141 gcattattg 20069133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 401 - 509
Target Start/End: Complemental strand, 39236186 - 39236079
Alignment:
Q  401 tatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattc 500  Q
    |||| |||| |||||| ||||||| ||||| ||||||||||||||||||| |||||| || |||| ||||||||||||| ||| | ||||||||||||||    
T  39236186 tattaatttctatttagctatgtccattttagtaattatacattcaaaagcaattttaat-aaaattatccaaacaacattcagtttgtttaatcaattc 39236088  T
Q  501 tgcattatt 509  Q
    |||||||||    
T  39236087 tgcattatt 39236079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 402 - 509
Target Start/End: Complemental strand, 11017990 - 11017883
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||||||||||| ||||| ||||  ||||||||||||  ||||||||| |||||||||||||||||| ||| | ||| |||||||||||    
T  11017990 atttacttgaatttaactatgtccattttagtaaccatacattcaaaaacaattttgatgaaaactatccaaacaacattcagtttgtctaatcaattct 11017891  T
Q  502 gcattatt 509  Q
    ||||||||    
T  11017890 gcattatt 11017883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 426 - 510
Target Start/End: Complemental strand, 41039683 - 41039599
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||||||||| ||||||||  |||||||||||||||||| |||||  |||||||||||||||||||||||    
T  41039683 attttagtaattacacattcaaaagcaattttgaaaaaaactatccaaacaacattcatttcgtttaatcaattctgcattattg 41039599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 2526282 - 2526379
Alignment:
Q  248 catgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    ||||||||||||||||||||| ||| |||| || || |||||||||||||| | ||||||||||||||||||||| | | ||  ||||||||||||||    
T  2526282 catgtttggtttggcttttcagaattgcttctaccccccaaaagcaattctggatgaagctacaattcctagcttttgagttaactagaatcaattct 2526379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 53765 - 53693
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagctt 322  Q
    ||||||||||| ||||||| ||| |||| |||||||||||||||||| | |||||||||||||||||||||||    
T  53765 tgtttggtttgccttttcataattgcttctatcctccaaaagcaattatggttgaagctacaattcctagctt 53693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 402 - 497
Target Start/End: Complemental strand, 53196 - 53101
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||| |||||||||  |||||| ||||| |||||||||| |||||||| ||||||||||||||| |||||||||||| ||| | |||||| ||||    
T  53196 atttacttgtatttagttatgtccattttagtaattatactttcaaaagcaattttgatcaaaaccatccaaacaacattcaatttgtttattcaa 53101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 27739449 - 27739351
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| |||| |||||||||||||||||| |   ||||||||||| ||||||||| |  ||||  ||||||||||||||||    
T  27739449 tgtttggtttgacttttaagaattgcttctatcctccaaaagcaattatccgtgaagctacaaatcctagcttttggcttttgtagaatcaattctaca 27739351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 349
Target Start/End: Complemental strand, 8958599 - 8958502
Alignment:
Q  252 tttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacac 349  Q
    ||||||||| ||||||| ||| | || ||||||| |||| |||||||  || |||||||||||||||  || |  |||||||||||||||||||||||    
T  8958599 tttggtttgacttttcagaattgtttctatcctctaaaaacaattctccttaaagctacaattcctaatttttggctttcctagaatcaattctacac 8958502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 37066657 - 37066560
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctac 347  Q
    ||||||||||||||||| | ||| | || ||||||| |||||||||| |  || ||||||||| ||||| |||||  |||| ||||||||||||||||    
T  37066657 tgtttggtttggcttttaagaattggttatatcctctaaaagcaattatcattaaagctacaaatcctaacttctagcttttctagaatcaattctac 37066560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 41040234 - 41040137
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctac 347  Q
    ||||||||||||||||| | ||| |||| ||||||||||||  |||| |  |||||||||||| ||||||||| |  |||| | ||||||||||||||    
T  41040234 tgtttggtttggcttttaagaattgcttctatcctccaaaaataattatccttgaagctacaaatcctagcttttggcttttcaagaatcaattctac 41040137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 7073373 - 7073275
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| ||||| |||| |||   ||||||| |||| |  |||||||||||| ||||||||| |  ||||  ||||||||||||||||    
T  7073373 tgtttggtttggcttttaaaaattgcttctatttcccaaaagtaattatccttgaagctacaaatcctagcttttggcttttgtagaatcaattctaca 7073275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 510
Target Start/End: Original strand, 19357056 - 19357114
Alignment:
Q  452 aattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||| || |||||||| ||||||||| ||| | ||||||||||||||||||||||||    
T  19357056 aattttcataaaaactatacaaacaacattcagtttgtttaatcaattctgcattattg 19357114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 21022730 - 21022632
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| | || |||||||| ||||||||| |   ||||||||||| ||||||||| |  ||||  ||||||||||||||||    
T  21022730 tgtttggtttggcttttaagaattgattctatcctcctaaagcaattatccatgaagctacaaatcctagcttttggcttttgtagaatcaattctaca 21022632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 33229204 - 33229302
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| | || |||||||||||||||||| |   ||||||||||| ||||| ||| |  ||||  ||||||||||||||||    
T  33229204 tgtttggtttggcttttaagaattgattctatcctccaaaagcaattatccatgaagctacaaatcctaacttttggcttttgtagaatcaattctaca 33229302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 39236994 - 39236896
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| | || |||||||||||| ||||| |   ||||||||||| ||||| ||| | |||||  ||||||||||||||||    
T  39236994 tgtttggtttggcttttaagaattgattctatcctccaaaaacaattatccatgaagctacaaatcctaacttttgacttttgtagaatcaattctaca 39236896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 7178743 - 7178796
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||| |||||||| |||||||||  |||||| ||||||||||    
T  7178743 attttggtaattatactttcaaaagcaattttgattcaaactacccaaacaaca 7178796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 427 - 479
Target Start/End: Original strand, 19784778 - 19784831
Alignment:
Q  427 ttttggtaatt-atacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    ||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||    
T  19784778 ttttggtaatttacacatttaaaagcaattttgatcaaaactatccaaacaaca 19784831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 478
Target Start/End: Complemental strand, 4569228 - 4569176
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaac 478  Q
    |||||||||||||| |||||||||  |||||| ||||||| ||||||||||||    
T  4569228 attttggtaattatgcattcaaaatcaatttttatcaaaattatccaaacaac 4569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 479
Target Start/End: Original strand, 32454504 - 32454555
Alignment:
Q  428 tttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||| ||| ||||||||||| ||||||||||  |||||||||||||||||    
T  32454504 tttggtcattttacattcaaaattaattttgattcaaactatccaaacaaca 32454555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 322
Target Start/End: Original strand, 40979452 - 40979491
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagctt 322  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  40979452 ctccaaaagcaattctggatgaagctacaattcctagctt 40979491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 10900165 - 10900227
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||||| | ||||||||||||||||| ||| | | ||  ||||||||||||||    
T  10900165 ctccaaaagcaattctggatgaagctacaattcctaacttttgagttagctagaatcaattct 10900227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 19356501 - 19356599
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | | | | || ||||||| |||||||||| |  || || |||||| |||| |||||| | ||| |||||||||||||||||    
T  19356501 tgtttggtttggcttttaagagttgattctatcctctaaaagcaattatccttaaaactacaaatccttgcttctaatttttctagaatcaattctaca 19356599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 19375471 - 19375409
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||||| | ||||||||||||||||| ||| | | ||  ||||||||||||||    
T  19375471 ctccaaaagcaattctggatgaagctacaattcctaacttttgagttagctagaatcaattct 19375409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 3747737 - 3747684
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||| |||||  ||||  ||||||||| ||||||||||||||||||    
T  3747737 attttggtaattttacatgtaaaatcaattttgattaaaactatccaaacaaca 3747684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 479
Target Start/End: Original strand, 22482163 - 22482207
Alignment:
Q  435 attatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||  |||||||||  |||||||||||||||||    
T  22482163 attatacattcaaaatcaattttgattcaaactatccaaacaaca 22482207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 168 - 401
Target Start/End: Complemental strand, 30984511 - 30984278
Alignment:
Q  168 atatagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttc 267  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30984511 atatagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttc 30984412  T
Q  268 aaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattc 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30984411 aaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattc 30984312  T
Q  368 catccctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||||||    
T  30984311 catccctgccctcattaatttttctaacccttct 30984278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 172 - 401
Target Start/End: Original strand, 30210394 - 30210623
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30210394 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 30210493  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30210494 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 30210593  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    |||| |||||||||||||||||||||||||    
T  30210594 cctgtcctcattaatttttctaacccttct 30210623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 170 - 401
Target Start/End: Complemental strand, 34774555 - 34774324
Alignment:
Q  170 atagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaa 269  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34774555 atagcctctgtttggtttggcttttgcaaagccagaatcaattttggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttttaa 34774456  T
Q  270 aatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattcca 369  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34774455 aatagtttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattcca 34774356  T
Q  370 tccctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||||    
T  34774355 tccctgccctcattaatttttctaacccttct 34774324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 193928 - 194040
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  193928 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 194027  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  194028 ttctgcattattg 194040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 629256 - 629368
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  629256 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 629355  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  629356 ttctgcattattg 629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 721532 - 721644
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  721532 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 721631  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  721632 ttctgcattattg 721644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 882639 - 882751
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  882639 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 882738  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  882739 ttctgcattattg 882751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 30211126 - 30211238
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30211126 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 30211225  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  30211226 ttctgcattattg 30211238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 34773983 - 34773871
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34773983 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 34773884  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  34773883 ttctgcattattg 34773871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 216 - 326
Target Start/End: Complemental strand, 629586 - 629476
Alignment:
Q  216 gagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattc 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  629586 gagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattc 629487  T
Q  316 ctagcttctta 326  Q
    |||||||||||    
T  629486 ctagcttctta 629476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 30982764 - 30982652
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30982764 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaattaa 30982665  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  30982664 ttctgcattattg 30982652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 189774 - 189862
Alignment:
Q  313 ttcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccctcattaatttttctaacccttct 401  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189774 ttcctagaatcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccctcattaatttttctaacccttct 189862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 717378 - 717466
Alignment:
Q  313 ttcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccctcattaatttttctaacccttct 401  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  717378 ttcctagaatcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccctcattaatttttctaacccttct 717466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 878485 - 878573
Alignment:
Q  313 ttcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccctcattaatttttctaacccttct 401  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  878485 ttcctagaatcttactttcctagaatcaattctacaccctcaattctattaattccatccctgccctcattaatttttctaacccttct 878573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 13016219 - 13016316
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  13016219 atttatttgtatttaactatgtccattttagtaattatacattcaaaagtaattttgatcaaaactattaaaacaacattcattctgtttaatcaatt 13016316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 924573 - 924681
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||||||||| |    
T  924573 atttacttgtatttaactatgtccattttagtaattatacattcaaaagtaattttgatcaaaactatctaaacaatattcagtttgtttaatcaattat 924672  T
Q  502 gcattattg 510  Q
    |||||||||    
T  924673 gcattattg 924681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 412 - 510
Target Start/End: Complemental strand, 35801856 - 35801758
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||||||| ||||| ||||||||||||||||||  ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  35801856 atttaactatgtccattttagtaattatacattcaaaaacaattttgataaaaactatccaaacaacattcattttgtttaatcaattctgcattattg 35801758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 2026056 - 2026164
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||  ||||||  | |||||||||||||||||| ||| | |||||||||||||||    
T  2026056 atttatttgtatttagctatgtccattttagtaattatacattcaaaatcaattttttttaaaactatccaaacaacattcagtttgtttaatcaattct 2026155  T
Q  502 gcattattg 510  Q
    |||||||||    
T  2026156 gcattattg 2026164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 26575770 - 26575878
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  | |||| | |||||||||||    
T  26575770 atttatttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacatcccttctatctaatcaattct 26575869  T
Q  502 gcattattg 510  Q
      |||||||    
T  26575870 atattattg 26575878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 402 - 509
Target Start/End: Original strand, 8417202 - 8417309
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| |||||| |||||||||||||||||||||| ||||||||| |||||||| ||| | |||||||||||||||    
T  8417202 atttacttgaatttagctatgtccattttagtaattctacattcaaaagtaattttgattaaaactatctaaacaacattcaatttgtttaatcaattct 8417301  T
Q  502 gcattatt 509  Q
    ||||||||    
T  8417302 gcattatt 8417309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 510
Target Start/End: Original strand, 44240658 - 44240761
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||||  ||||||||| |||||||||||||||||| ||| | |||||||||||||||||||    
T  44240658 atttttatttagctatgtccattttagtaattatacattcaaaaacaattttgat-aaaactatccaaacaacattcagtttgtttaatcaattctgcat 44240756  T
Q  506 tattg 510  Q
    |||||    
T  44240757 tattg 44240761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 506
Target Start/End: Complemental strand, 45275952 - 45275848
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||| ||| | ||||||||||||| |    
T  45275952 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaataacattcagtttgtttaatcaatttt 45275853  T
Q  502 gcatt 506  Q
    |||||    
T  45275852 gcatt 45275848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 23018418 - 23018310
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||| ||||||||  ||||||  |||| ||||||||||||||||||  |||||||||||||||||| ||||||||| ||| | ||||||||||||| |    
T  23018418 atttatatgtatttagttatgtcggttttagtaattatacattcaaaaacaattttgatcaaaactattcaaacaacactcaatgtgtttaatcaatttt 23018319  T
Q  502 gcattattg 510  Q
     ||||||||    
T  23018318 acattattg 23018310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 432 - 510
Target Start/End: Original strand, 2598506 - 2598584
Alignment:
Q  432 gtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||  ||||| |||||||||||||| |||||||||    
T  2598506 gtaattatattttcaaaagtaattttgatcaaaactatcaaaacaacgttcattttgtttaatcaattcagcattattg 2598584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 35164474 - 35164381
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||||||||||||     |||| ||||||||||||||||||||  ||||||||||||||||||| || | |||||||| ||||||||||||||    
T  35164474 tgtttggtttggcttttca-----gcttctatcctccaaaagcaattctccttgaagctacaattcctagtttttgactttcctcgaatcaattctaca 35164381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 35802442 - 35802344
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| ||||| |||| |||||||||||||||||| |  |||||||||||  ||||||||| |  ||||||||||||||||||||||    
T  35802442 tgtttggtttgacttttaaaaattgcttctatcctccaaaagcaattatccttgaagctacatatcctagcttttggctttcctagaatcaattctaca 35802344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 924099 - 924169
Alignment:
Q  248 catgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattccta 318  Q
    ||||||||||||| ||||||||||| |||| ||| ||||||||| |||||||||| |||||||||||||||    
T  924099 catgtttggtttgacttttcaaaattgcttctatactccaaaagtaattctagttaaagctacaattccta 924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 510
Target Start/End: Complemental strand, 17073754 - 17073677
Alignment:
Q  433 taattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||| |   | ||||||||||||||||||||||||    
T  17073754 taattatacattcaaaaacaattttgataaaaactatccaaacaacattatgtttgtttaatcaattctgcattattg 17073677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 510
Target Start/End: Original strand, 17574516 - 17574593
Alignment:
Q  433 taattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||| |   | ||||||||||||||||||||||||    
T  17574516 taattatacattcaaaaacaattttgataaaaactatccaaacaacattatgtttgtttaatcaattctgcattattg 17574593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 36821176 - 36821070
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| |||||  |||||| ||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||| ||| | ||  | |||||||||    
T  36821176 atttacttgaatttagttatgtccattttagtaattatacattcaaaagcaatttcgatgaaaactatccaaacaacattcagtttg--tcatcaattct 36821079  T
Q  502 gcattattg 510  Q
    |||||||||    
T  36821078 gcattattg 36821070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 45276501 - 45276403
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||| ||||| ||||| ||||| | || |||||||||||||||||| |  || ||||||||| |||||||||||  |||| |||||||||||||||||    
T  45276501 tgttttgtttgacttttaaaaattgattatatcctccaaaagcaattatccttaaagctacaaatcctagcttctagcttttctagaatcaattctaca 45276403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 308871 - 308915
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctg 215  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  308871 tagcctctgtttggtttggcttttgcaaagccagaatcaattctg 308915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 8416662 - 8416760
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||| |||||||||| | ||| | || |||||||||||||||||| |  || ||||||||| ||||| |||||  |||| |||||||||||||||||    
T  8416662 tgtttgatttggcttttaagaattgattctatcctccaaaagcaattatccttaaagctacaaatcctaacttctagcttttctagaatcaattctaca 8416760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 36821725 - 36821653
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagctt 322  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||||| |  || ||| ||||||||| |||||    
T  36821725 tgtttggtttggcttttcagaattgcttctatcctccaaaagcaattatccttaaagttacaattccaagctt 36821653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 3619218 - 3619165
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    ||||||||||||||||||| ||||  |||||||||  |||||||||||||||||    
T  3619218 attttggtaattatacatttaaaatcaattttgattcaaactatccaaacaaca 3619165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 478
Target Start/End: Complemental strand, 2071723 - 2071665
Alignment:
Q  420 atgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaac 478  Q
    ||||||| |||||||||||||| ||||||||  ||||||||  ||| ||||||||||||    
T  2071723 atgtctaatttggtaattatactttcaaaagctattttgattcaaattatccaaacaac 2071665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 3590107 - 3590169
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||| ||||||| ||||||||||||||||||| ||| | | ||  ||||||||||||||    
T  3590107 ctccaaaaacaattctggttgaagctacaattcctaacttttgagttaactagaatcaattct 3590169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 35615668 - 35615722
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaa 480  Q
    ||||| |||||||| |||||||||  |||||||| | ||||||||||||||||||    
T  35615668 attttcgtaattatgcattcaaaatcaattttgagccaaactatccaaacaacaa 35615722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 32606602 - 32606549
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    ||||||||||||| | || |||||| |||||| ||| |||||||||||||||||    
T  32606602 attttggtaattagatatgcaaaagcaattttcatccaaactatccaaacaaca 32606549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 41289208 - 41289155
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||| | |||||||||  |||||||||  |||||||||||||||||    
T  41289208 attttggtaattttgcattcaaaatcaattttgattcaaactatccaaacaaca 41289155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 479
Target Start/End: Original strand, 15206656 - 15206708
Alignment:
Q  427 ttttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    ||||||||||||| |||||||||  |||||||  | |||||||||||||||||    
T  15206656 ttttggtaattatgcattcaaaatcaattttgggccaaactatccaaacaaca 15206708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 479
Target Start/End: Complemental strand, 24297740 - 24297688
Alignment:
Q  427 ttttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||||  ||||  |||||||||  |||||||||||||||||    
T  24297740 ttttggtaattatacatgtaaaatcaattttgattcaaactatccaaacaaca 24297688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 476
Target Start/End: Complemental strand, 37458447 - 37458403
Alignment:
Q  432 gtaattatacattcaaaagtaattttgatcaaaactatccaaaca 476  Q
    ||||||||||||||||||  |||||||||  ||||||||||||||    
T  37458447 gtaattatacattcaaaatcaattttgattcaaactatccaaaca 37458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 169 - 401
Target Start/End: Complemental strand, 31012611 - 31012379
Alignment:
Q  169 tatagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttca 268  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012611 tatagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttca 31012512  T
Q  269 aaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattcc 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012511 aaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattcc 31012412  T
Q  369 atccctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||||||    
T  31012411 atccctgccctcattaatttttctaacccttct 31012379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 171 - 401
Target Start/End: Complemental strand, 25341651 - 25341421
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 270  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25341651 tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 25341552  T
Q  271 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25341551 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 25341452  T
Q  371 ccctgccctcattaatttttctaacccttct 401  Q
     ||||||||||||||||||||||||||||||    
T  25341451 tcctgccctcattaatttttctaacccttct 25341421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 31012150 - 31012038
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012150 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 31012051  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  31012050 ttctgcattattg 31012038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 25341131 - 25341019
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25341131 ttctagttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 25341032  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  25341031 ttctgcattattg 25341019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 25191414 - 25191306
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||  ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  25191414 atttatttgtatttagctatgtgcattttagtaattatacatttaaaagcaattttgatcaaaactatccaaacaacattcattttgtttaatcaattct 25191315  T
Q  502 gcattattg 510  Q
     ||||||||    
T  25191314 acattattg 25191306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 510
Target Start/End: Original strand, 32451295 - 32451406
Alignment:
Q  399 tctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaat 498  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||||  |||||||| ||||| ||||||||||||    
T  32451295 tctatttatttgtatttaaccatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatttaaacaacattcattatgtttaatcaat 32451394  T
Q  499 tctgcattattg 510  Q
    | | ||||||||    
T  32451395 tttacattattg 32451406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 402 - 500
Target Start/End: Complemental strand, 298221 - 298123
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattc 500  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  298221 atttatttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatctaaacaacatccattctgtttaatcaattc 298123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 404 - 501
Target Start/End: Original strand, 41065305 - 41065402
Alignment:
Q  404 ttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||| |||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  41065305 ttatttttatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacattcattctctttaatcaattct 41065402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 1999778 - 1999670
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||| || ||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  1999778 atttatttgtatttagctatgtccattttagtaattatacattcaaaagcaagtttgatcaaaactattcaaacaacatttattctatttaatcaattct 1999679  T
Q  502 gcattattg 510  Q
     ||||||||    
T  1999678 acattattg 1999670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 4035882 - 4035990
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| | | | |||||||||||||||    
T  4035882 atttatttatatttagctatgtctattttagtaattatacattcaaaagcaattttgattaaaactatccaaacaacatttagtttgtttaatcaattct 4035981  T
Q  502 gcattattg 510  Q
     ||||||||    
T  4035982 acattattg 4035990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 26826915 - 26827023
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  26826915 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattct 26827014  T
Q  502 gcattattg 510  Q
    |||||||||    
T  26827015 gcattattg 26827023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 227 - 358
Target Start/End: Original strand, 41064585 - 41064717
Alignment:
Q  227 aagcaattctgcaatatt-taacatgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttctt 325  Q
    |||||||||| ||| ||| ||| |||||||||||| ||||||| ||| |||| |||||||||||| |||||||   | |||||||||||||||||||||     
T  41064585 aagcaattctacaacattctaatatgtttggtttgccttttcataattgcttctatcctccaaaaacaattctccataaagctacaattcctagcttctg 41064684  T
Q  326 actttcctagaatcaattctacaccctcaattc 358  Q
    ||||| |||||||||||||||||||||||||||    
T  41064685 acttttctagaatcaattctacaccctcaattc 41064717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 406 - 509
Target Start/End: Original strand, 12910462 - 12910564
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||||||    
T  12910462 atttctatttagctatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatccaaacaacattcagtttgtttaatcaattctgcat 12910560  T
Q  506 tatt 509  Q
    ||||    
T  12910561 tatt 12910564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 402 - 509
Target Start/End: Original strand, 15000416 - 15000523
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||||| ||| ||||||||||||||||||| ||||||| | |||||||||||||||||| ||| | |||||||||||||||    
T  15000416 atttacttgaatttagctatgtctagtttagtaattatacattcaaaagcaattttgttaaaaactatccaaacaacattcagtttgtttaatcaattct 15000515  T
Q  502 gcattatt 509  Q
    ||||||||    
T  15000516 gcattatt 15000523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 403 - 510
Target Start/End: Original strand, 39857517 - 39857624
Alignment:
Q  403 tttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctg 502  Q
    ||||||| |||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||| |||||     
T  39857517 tttatttttatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacgacattcattttgtttaatcgattcta 39857616  T
Q  503 cattattg 510  Q
    | ||||||    
T  39857617 cgttattg 39857624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 411 - 499
Target Start/End: Original strand, 40233849 - 40233937
Alignment:
Q  411 tatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    |||||||||||||| ||||  ||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  40233849 tatttaactatgtccatttaagtaatcatacattcaaaaataattttgatcaaaactatccaaacaacattcattccgtttaatcaatt 40233937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 416 - 510
Target Start/End: Complemental strand, 47085380 - 47085286
Alignment:
Q  416 aactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||   || ||| ||||||||||| ||||||||||    
T  47085380 aactatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacctccactctatttaatcaattttgcattattg 47085286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 11341955 - 11342052
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||  ||||||||| || ||||| || | ||||||||    
T  11341955 atttatttgtatttaactatgtctattttagtaattatacattcaaaaacaattttgatcaaaatcatccaaacatcattcattatgctaaatcaatt 11342052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 39958059 - 39957951
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| |||||| ||||||  ||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| | | | |||||||||||||||    
T  39958059 atttatttttatttagctatgttaattttagtaattatacattcaaaaacaattttgatcaaaactatccaaacgacatttagtttgtttaatcaattct 39957960  T
Q  502 gcattattg 510  Q
     ||||||||    
T  39957959 acattattg 39957951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 43664400 - 43664292
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||| || | ||| | ||||||| |||||||    
T  43664400 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaataatattcagtttgtttaaacaattct 43664301  T
Q  502 gcattattg 510  Q
    |||||||||    
T  43664300 gcattattg 43664292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 412 - 510
Target Start/End: Complemental strand, 26827306 - 26827208
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||| |||||| |||||||||||| ||||||||| |||||||||||||||||  ||| | |||||||||||||||||| |||||    
T  26827306 atttagctatgtccattttagtaattgtacattcaaaagcaattttgataaaaactatccaaacaactttcaatttgtttaatcaattctgcaatattg 26827208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 426 - 510
Target Start/End: Complemental strand, 25472301 - 25472217
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||||| ||||||||| ||||||||| |||||||||||||||||| ||| | ||||||||||||| ||||||||||    
T  25472301 attttagtaattatatattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattatgcattattg 25472217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 25970433 - 25970531
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| |||| ||||||||||||| ||||||  || ||||||||||||||||||| |  ||||| ||||||||||||||||    
T  25970433 tgtttggtttggcttttaagaattgcttctatcctccaaaagtaattctctttaaagctacaattcctagcttttggctttcttagaatcaattctaca 25970531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 30139382 - 30139274
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||  ||||||||| |||||||||| ||| ||| ||| | ||||||||||||| |    
T  30139382 atttacttgaatttagctatgtccattttagtaattatacattcaaaatcaattttgataaaaactatccgaacgacattcagtttgtttaatcaattat 30139283  T
Q  502 gcattattg 510  Q
    | |||||||    
T  30139282 gaattattg 30139274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 418 - 510
Target Start/End: Original strand, 30825715 - 30825806
Alignment:
Q  418 ctatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||| |||| |||||||| |||| |||   ||||||||||||||||||||||||    
T  30825715 ctatgtctattttagta-ttatacattcaaaagcaattttgataaaaattatccaaataacattcagattgtttaatcaattctgcattattg 30825806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 39857075 - 39857172
Alignment:
Q  248 catgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    ||||||||||||| ||||||| ||| |||| ||||||||||||| |||||| | |||||||||||||| |||||| | | ||  ||||||||||||||    
T  39857075 catgtttggtttgacttttcagaattgcttctatcctccaaaagtaattctggatgaagctacaattcatagcttttgagttaactagaatcaattct 39857172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 249 - 348
Target Start/End: Original strand, 37371078 - 37371177
Alignment:
Q  249 atgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||||||||||| | ||| | || |||||||||||||||||| |  || ||||||||| ||||| |||||  |||| |||||||||||||||||    
T  37371078 atgtttggtttggcttttaagaattggttctatcctccaaaagcaattatctttaaagctacaaatcctaacttctagcttttctagaatcaattctaca 37371177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 14999868 - 14999966
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| | ||| | || ||||||||||||| ||||||  || |||||||||||||||  || |  ||||||||||||||||||||||    
T  14999868 tgtttggtttggctttttagaattgattctatcctccaaaagtaattctccttaaagctacaattcctaatttttggctttcctagaatcaattctaca 14999966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 30825190 - 30825288
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| |||| |||||||||||| |||||||  || ||| ||||||||||||||| |  |||||| |||||||||||||||    
T  30825190 tgtttggtttgcctttttagaattgcttctatcctccaaaaacaattctccttaaagttacaattcctagcttttggctttccaagaatcaattctaca 30825288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 452 - 510
Target Start/End: Original strand, 37371257 - 37371315
Alignment:
Q  452 aattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||||| |||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  37371257 aattttgataaaaactatccaaacaacattcactttgtttaatcaattctgcattattg 37371315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 452 - 510
Target Start/End: Original strand, 45203101 - 45203159
Alignment:
Q  452 aattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||||    
T  45203101 aattttgatcaaaactatccaaacaacattcaattggtttaatcaattctgcattattg 45203159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 476
Target Start/End: Complemental strand, 26169459 - 26169402
Alignment:
Q  419 tatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaaca 476  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||||    
T  26169459 tatgtccattttagtaattatacattcaaaagcaattttgatcaaaactattcaaaca 26169402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 26826384 - 26826480
Alignment:
Q  252 tttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||| | |||  ||| ||||||||||||| ||||||  || ||| ||||||||||| ||| || |||||||| |||||||||||||    
T  26826384 tttggtttggcttttaagaattacttctatcctccaaaagtaattctccttaaaggtacaattcctaactttttcctttcctataatcaattctaca 26826480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 25472863 - 25472765
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| | || |||||||||||||||||| |  |||||||||||| || ||||||||   ||| |||||||||||||||||    
T  25472863 tgtttggtttgacttttaagaattgattctatcctccaaaagcaattatccttgaagctacaaatcatagcttctacattttctagaatcaattctaca 25472765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 12909229 - 12909327
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| | || |||||||||||||||||| |   ||||||||||| ||||||||| |  ||||  ||||||||||||||||    
T  12909229 tgtttggtttgacttttaagaattgattctatcctccaaaagcaattatccatgaagctacaaatcctagcttttggcttttgtagaatcaattctaca 12909327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 477
Target Start/End: Complemental strand, 41625649 - 41625599
Alignment:
Q  427 ttttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaa 477  Q
    ||||||||||||||| |||||||| ||||||||||  ||||||||||||||    
T  41625649 ttttggtaattataccttcaaaagcaattttgatctcaactatccaaacaa 41625599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 43664912 - 43664814
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||| ||| |||||||| |||   || |||||||||||||||||| |  || ||||||||||| ||| | | | |||||||||||||||||||||||    
T  43664912 tgtttgttttagcttttcagaattcattctatcctccaaaagcaatttttcttaaagctacaatttctaacctttgactttcctagaatcaattctaca 43664814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 477
Target Start/End: Original strand, 2839263 - 2839314
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaa 477  Q
    |||||||||||||||||||||||| |||||||||   ||| |||||||||||    
T  2839263 attttggtaattatacattcaaaaataattttgactcaaagtatccaaacaa 2839314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 19544572 - 19544634
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    ||||||||| |||| | |||||||||||||||| |||||| | | ||| ||||||||||||||    
T  19544572 ctccaaaagtaattatggttgaagctacaattcatagcttttgagtttactagaatcaattct 19544634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 480
Target Start/End: Complemental strand, 39634302 - 39634248
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaa 480  Q
    |||||||||||||| |||||||||  |||||||||| ||  ||||||||||||||    
T  39634302 attttggtaattatgcattcaaaatcaattttgatccaagttatccaaacaacaa 39634248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 40903304 - 40903251
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||||| |||||  |||||||||   ||||||||||||||||    
T  40903304 attttggtaattatacatccaaaatcaattttgatttgaactatccaaacaaca 40903251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 476
Target Start/End: Original strand, 40725867 - 40725927
Alignment:
Q  416 aactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaaca 476  Q
    ||||||||  |||||  |||||||||||||||||  ||||||||||||||  |||||||||    
T  40725867 aactatgtacattttaataattatacattcaaaaacaattttgatcaaaataatccaaaca 40725927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 171 - 401
Target Start/End: Complemental strand, 31431242 - 31431012
Alignment:
Q  171 tagcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 270  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31431242 tagcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaa 31431143  T
Q  271 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31431142 atagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccat 31431043  T
Q  371 ccctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||||    
T  31431042 ccctgccctcattaatttttctaacccttct 31431012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 172 - 401
Target Start/End: Complemental strand, 24038267 - 24038038
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24038267 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 24038168  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24038167 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 24038068  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    |||| |||||||||||||||||||||||||    
T  24038067 cctgtcctcattaatttttctaacccttct 24038038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 172 - 401
Target Start/End: Original strand, 24246540 - 24246769
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24246540 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattatgcaatatttaacatgtttggtttggcttttcaaaa 24246639  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24246640 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 24246739  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||    
T  24246740 cctgccctcattaatttttctaacccttct 24246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 172 - 401
Target Start/End: Complemental strand, 39383163 - 39382934
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39383163 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 39383064  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39383063 tagcttttatcctccaaaagcaattctagttgaagctacaattcctaacttcttactttcctagaatcaattctacaccctcaattctattaattccatc 39382964  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    ||||||||||||||||||||||||||||||    
T  39382963 cctgccctcattaatttttctaacccttct 39382934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 173 - 401
Target Start/End: Original strand, 18140375 - 18140603
Alignment:
Q  173 gcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 272  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18140375 gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttttaaaat 18140474  T
Q  273 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 372  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18140475 agcttttatcctccaaaagcaattttagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 18140574  T
Q  373 ctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||    
T  18140575 ctgccctcattaatttttctaacccttct 18140603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 173 - 401
Target Start/End: Original strand, 49127588 - 49127816
Alignment:
Q  173 gcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaat 272  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49127588 gcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggctttttaaaat 49127687  T
Q  273 agcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 372  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49127688 agcttttatcctccaaaagcaattttagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatcc 49127787  T
Q  373 ctgccctcattaatttttctaacccttct 401  Q
    |||||||||||||||||||||||||||||    
T  49127788 ctgccctcattaatttttctaacccttct 49127816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 2263640 - 2263805
Alignment:
Q  7 aggtgatacgcctttgtcggatgatttaacctgtttctatctctaataatgatgttgaattaatatgaactgtcacatcttcatttaacgtgtcatgtca 106  Q
    |||||||| | |||||||||| || |||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  2263640 aggtgataggtctttgtcggacgacttaatctgtttctatctctaatagtgatgttgaatcaatataaactgtcacatcttcatttaacgtgtcatgtca 2263739  T
Q  107 tagtatttaacaattgaacttaatatactgttcaacgaacgaaattgctaattcgtaaaacatata 172  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  2263740 tagtatttaacgattgaacttaatgtaatgttcaacgaacgaaattgctaattcgtaaaacatata 2263805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 24035755 - 24035643
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24035755 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 24035656  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  24035655 ttctgcattattg 24035643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 24247089 - 24247201
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24247089 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 24247188  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  24247189 ttctgcattattg 24247201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 39382573 - 39382461
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39382573 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 39382474  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  39382473 ttctgcattattg 39382461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 49128200 - 49128312
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49128200 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 49128299  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  49128300 ttctgcattattg 49128312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 16202692 - 16202584
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  16202692 atttatttgtatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacattcattatatttaatcaattct 16202593  T
Q  502 gcattattg 510  Q
     ||||||||    
T  16202592 acattattg 16202584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 39733359 - 39733467
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  39733359 atttatttgtatttagctatgtccgttttagtaattatacattcaaaattaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattct 39733458  T
Q  502 gcattattg 510  Q
     ||||||||    
T  39733459 acattattg 39733467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 51833618 - 51833519
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| |||||| ||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  51833618 atttatttttatttagctatgtccattttagtaattatacattcaaaagcaattttgttcaaaactatccaaacaacattcattctgtttaatcaattct 51833519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 5937475 - 5937367
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||  |||||||||||||| ||| ||||||||| ||| | |||||||||||||||    
T  5937475 atttatttgtatttaactatgtccgttttagtaattatacattcaaaatcaattttgatcaaaaatattcaaacaacattcagtttgtttaatcaattct 5937376  T
Q  502 gcattattg 510  Q
    |||||||||    
T  5937375 gcattattg 5937367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 26459526 - 26459634
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| |||||||||  |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| |    
T  26459526 atttacttgtatttagttatgtccattttagtaattatactttcaaaagtaattttgatcaaaactatccaaacaacattcaatttgtttaatcaatttt 26459625  T
Q  502 gcattattg 510  Q
    |||||||||    
T  26459626 gcattattg 26459634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 30417954 - 30417846
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| |||||  |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||    
T  30417954 atttacttgaatttagttatgtctattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaattct 30417855  T
Q  502 gcattattg 510  Q
    |||||||||    
T  30417854 gcattattg 30417846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 50523428 - 50523320
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||||||||||  |||||| ||||| |||||||||| |||||||  |||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  50523428 atttatttgtatttagatatgtccattttagtaattataccttcaaaatcaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattct 50523329  T
Q  502 gcattattg 510  Q
    |||||||||    
T  50523328 gcattattg 50523320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 185 - 371
Target Start/End: Complemental strand, 51834412 - 51834225
Alignment:
Q  185 tttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatt-taacatgtttggtttggcttttcaaaatagcttttatcc 283  Q
    |||| |||||| | ||| |||| |||||||  | |||| ||||||||||||| ||| ||| ||| |||||||||||| ||||||| ||| |||| |||||    
T  51834412 tttgacttttgtacagctagaagcaattctataacattccaaaagcaattctacaacattctaatatgtttggtttgacttttcagaattgcttctatcc 51834313  T
Q  284 tccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    |||||||||||||||   | ||||||||||||||| |||||  |||| |||||||||||| ||||| |||||||| || |||||||||    
T  51834312 tccaaaagcaattctccataaagctacaattcctaacttctggcttttctagaatcaattatacactctcaattccatcaattccatc 51834225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 28963417 - 28963309
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | ||||||||||||| |    
T  28963417 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcagtttgtttaatcaatttt 28963318  T
Q  502 gcattattg 510  Q
    |||||||||    
T  28963317 gcattattg 28963309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 29385605 - 29385497
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||| ||| | ||||||||||||| |    
T  29385605 atttacttgaatttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaattatccaaacaacattcagtttgtttaatcaattat 29385506  T
Q  502 gcattattg 510  Q
    |||||||||    
T  29385505 gcattattg 29385497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 45106320 - 45106428
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| |||||||||||||  |||||||||||||||||  ||||||||| |||||||||||||||||| ||| | ||||||||||||| |    
T  45106320 atttacttgaatttagctatgtctattttattaattatacattcaaaatcaattttgataaaaactatccaaacaacattcagtttgtttaatcaatttt 45106419  T
Q  502 gcattattg 510  Q
    |||||||||    
T  45106420 gcattattg 45106428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 498
Target Start/End: Original strand, 51677532 - 51677628
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaat 498  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||| |||| ||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  51677532 atttatttgtatttaactatgtccattttagtaattatatatttaaaaataattttgatcaaaaatattcaaacaacactcattccgtttaatcaat 51677628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 412 - 510
Target Start/End: Complemental strand, 22605906 - 22605810
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||  |||||||||||| |||||||||||    
T  22605906 atttagctatgtcaattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcat--tgtttaatcaatactgcattattg 22605810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 53663194 - 53663086
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| |||||  |||||||||||| ||||||||||||||||||  ||||||| | |||||||||||||||||| ||| | ||||||||||||| |    
T  53663194 atttacttgaatttagttatgtctattttagtaattatacattcaaaaacaattttgttaaaaactatccaaacaacattcagtttgtttaatcaatttt 53663095  T
Q  502 gcattattg 510  Q
    |||||||||    
T  53663094 gcattattg 53663086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 401 - 510
Target Start/End: Complemental strand, 53403686 - 53403577
Alignment:
Q  401 tatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattc 500  Q
    |||||| ||| ||||||| ||||| ||||| ||||||||||||||||||  ||||||||| |||| |||||||| |||| ||| | |||||||||||||     
T  53403686 tatttacttgaatttaaccatgtccattttagtaattatacattcaaaatcaattttgataaaaattatccaaataacattcagtttgtttaatcaatta 53403587  T
Q  501 tgcattattg 510  Q
    ||||||||||    
T  53403586 tgcattattg 53403577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 418 - 510
Target Start/End: Original strand, 56561046 - 56561137
Alignment:
Q  418 ctatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||| ||||| ||| | ||||||||||||||||| ||||||    
T  56561046 ctatgtccattttagtaattatacattcaaaagcaattttgat-aaaactatccaaccaacattcagtttgtttaatcaattctgcgttattg 56561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 404 - 510
Target Start/End: Original strand, 8510686 - 8510792
Alignment:
Q  404 ttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgc 503  Q
    |||||||||||||||||| || |||||  |||||||||||||||||  |||||||||||||| ||  ||||||||| | ||||| ||| ||||||| |||    
T  8510686 ttatttgtatttaactatatccattttaataattatacattcaaaaacaattttgatcaaaattaatcaaacaacatttattctattttatcaattatgc 8510785  T
Q  504 attattg 510  Q
    |||||||    
T  8510786 attattg 8510792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 53404209 - 53404111
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||| |  ||||||| ||||||||||||||||||||  || ||||||||||||||||||| |   |||||||||||||||| ||||    
T  53404209 tgtttggtttggcttttaagcatagcttctatcctccaaaagcaattctccttaaagctacaattcctagcttttggttttcctagaatcaattttaca 53404111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 28912154 - 28912259
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| ||||||| |||||| ||||| ||||||||||||||||||| || ||||||||||| |||| |||||||| ||||||  ||||||||||||     
T  28912154 atttatttttatttaattatgtccattttagtaattatacattcaaaagcaa-tttgatcaaaattatctaaacaacattcattc--tttaatcaattcc 28912250  T
Q  502 gcattattg 510  Q
     ||||||||    
T  28912251 acattattg 28912259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 412 - 510
Target Start/End: Original strand, 38768352 - 38768446
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||| ||||||||||||||||||| |||||||||    | ||||||||||||| ||||| |||||||||||||||||| |||||    
T  38768352 atttagctatgtccattttagtaattatacattcaaaagcaattttgat----aatatccaaacaacattcattttgtttaatcaattctgcagtattg 38768446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 441 - 510
Target Start/End: Original strand, 48407491 - 48407560
Alignment:
Q  441 cattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||| ||||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  48407491 cattcaaaagcaattttgataaaaattatccaaacaacattcattttgtttaatcaattctgcattattg 48407560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 45105807 - 45105904
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||||||||||| ||| |||| ||||||||| ||||||||||  || |||||| ||||| |||||| || |||| |||||||||||||||||    
T  45105807 tgtttggtttggcttttcagaattgcttatatcctccagaagcaattcttcttaaagctaaaattcatagctt-ttgcttttctagaatcaattctaca 45105904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 510
Target Start/End: Original strand, 36212790 - 36212870
Alignment:
Q  430 tggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||||  |||| | ||||||||| | ||||||||||    
T  36212790 tggtaattatacattcaaaagtgattttaatcaaaactatctaaacaacatacattttatttaatcaaatatgcattattg 36212870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 52058350 - 52058252
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| |||| |||||||||||||||||| |  |||||||||||| ||||||||| |  ||||  ||||||||||||||||    
T  52058350 tgtttggtttgacttttaagaattgcttctatcctccaaaagcaattatccttgaagctacaaatcctagcttttggcttttgtagaatcaattctaca 52058252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 30418490 - 30418397
Alignment:
Q  255 ggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||||| ||||| | || |||||||||||||||||| |  || ||||||||| ||||| ||| |  ||||||||||||||||||||||    
T  30418490 ggtttggcttttaaaaattgattctatcctccaaaagcaattatccttcaagctacaaatcctaacttttagctttcctagaatcaattctaca 30418397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 346
Target Start/End: Complemental strand, 22606458 - 22606362
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattcta 346  Q
    ||||||||||  ||||| | ||| |||| |||||||||||||||||| |   ||||||||||| ||||||||| | ||||||| |||||||||||||    
T  22606458 tgtttggtttaacttttaagaattgcttctatcctccaaaagcaattattcgtgaagctacaaatcctagcttttgactttccaagaatcaattcta 22606362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 28911579 - 28911649
Alignment:
Q  248 catgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattccta 318  Q
    ||||||||||||||||| ||| ||| |||| || ||||||||||||||| | | |||||||||||||||||    
T  28911579 catgtttggtttggcttatcagaattgcttctaccctccaaaagcaattgtggatgaagctacaattccta 28911649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 38767791 - 38767889
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| |||| |||||||||||||||||| |  ||||||||||||  ||||| || |  |||||| |||||||||||||||    
T  38767791 tgtttggtttgacttttaagaattgcttctatcctccaaaagcaattatccttgaagctacaaagcctagtttttggctttccaagaatcaattctaca 38767889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 53663732 - 53663635
Alignment:
Q  251 gtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||| |||||||||| | ||| | || |||||||||||||||||| |  || ||||||||||||||| ||| |  |||||||| |||||||||||||    
T  53663732 gtttgatttggctttttagaattgattctatcctccaaaagcaattatccttaaagctacaattcctaacttttggctttcctataatcaattctaca 53663635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 346
Target Start/End: Complemental strand, 28963966 - 28963870
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattcta 346  Q
    ||||||||||| ||||| | ||| | || |||||||||||||||||| |  || ||||||||| ||||| |||||  |||| |||||||||||||||    
T  28963966 tgtttggtttgacttttaagaattgattatatcctccaaaagcaattattcttaaagctacaaatcctaacttctagcttttctagaatcaattcta 28963870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 16203159 - 16203097
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||| | ||||||||||||||||||||||| | | ||  ||||||||||||||    
T  16203159 ctccaaaagcaattttggttgaagctacaattcctagcttttgagttgactagaatcaattct 16203097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 39732843 - 39732905
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||||| | ||||||||||||||||||||| | | ||  ||||||||||||||    
T  39732843 ctccaaaagcaattctggatgaagctacaattcctagcttttgagttagctagaatcaattct 39732905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 50523936 - 50523874
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||||| | ||||||||||||||||||||| | | ||  ||||||||||||||    
T  50523936 ctccaaaagcaattctggatgaagctacaattcctagcttttgagttagctagaatcaattct 50523874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 49723784 - 49723855
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagctt 322  Q
    ||||||||||||||||| | ||| | || ||||||||||||| |||||| ||| |||||||||||| ||||||    
T  49723784 tgtttggtttggcttttaagaattgtttctatcctccaaaag-aattctcgttaaagctacaattcttagctt 49723855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 479
Target Start/End: Complemental strand, 43781666 - 43781615
Alignment:
Q  428 tttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||| ||| ||||||||||| ||||||||||  |||||||||||||||||    
T  43781666 tttggtcattttacattcaaaattaattttgattcaaactatccaaacaaca 43781615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 479
Target Start/End: Original strand, 51922878 - 51922929
Alignment:
Q  428 tttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||| |||||||||||||||  |||||||||  |||||||||||||||||    
T  51922878 tttggtcattatacattcaaaatcaattttgattcaaactatccaaacaaca 51922929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 5937908 - 5937846
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||| | | ||||||||||||||||||||| | | ||  ||||||||||||||    
T  5937908 ctccaaaagcaattatggatgaagctacaattcctagcttttgagttagctagaatcaattct 5937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 25312648 - 25312705
Alignment:
Q  423 tctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaa 480  Q
    |||||||||||||||||||||  ||||| |||||||||  ||  ||||||||||||||    
T  25312648 tctattttggtaattatacatctaaaagcaattttgattcaatgtatccaaacaacaa 25312705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 26457118 - 26457183
Alignment:
Q  257 tttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagctt 322  Q
    |||| ||||||| ||| ||||||||||||||||| |||||    |||||||||||||| |||||||    
T  26457118 tttgacttttcagaattgcttttatcctccaaaaacaatttcgattgaagctacaatttctagctt 26457183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 38305947 - 38306000
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||| |||||||||  |||||||||| ||  |||||||||||||    
T  38305947 attttggtaattatgcattcaaaatcaattttgatccaagttatccaaacaaca 38306000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 41866091 - 41866144
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||||| ||||| ||||||||    |||||||||||||||||    
T  41866091 attttggtaattatacatgcaaaattaattttggcacaaactatccaaacaaca 41866144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 476
Target Start/End: Original strand, 13167459 - 13167511
Alignment:
Q  424 ctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaaca 476  Q
    |||||||||||||||| |||| ||||| |||||||||  || |||||||||||    
T  13167459 ctattttggtaattatgcatttaaaagcaattttgattcaatctatccaaaca 13167511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 479
Target Start/End: Complemental strand, 20191834 - 20191782
Alignment:
Q  427 ttttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||||| |||| ||||||||||  ||  |||||||||||||    
T  20191834 ttttggtaattatacatttaaaattaattttgattcaagttatccaaacaaca 20191782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 509
Target Start/End: Complemental strand, 29810118 - 29810043
Alignment:
Q  433 taattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattatt 509  Q
    ||||||||| || ||||  | |||| |||||||||||||||| |||| |||||| |||||||| ||| |||||||||    
T  29810118 taattatacgttaaaaaacagttttaatcaaaactatccaaaaaacattcattcggtttaatc-attttgcattatt 29810043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 218; Significance: 1e-119; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 172 - 401
Target Start/End: Original strand, 30018773 - 30019002
Alignment:
Q  172 agcctttgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30018773 agcctctgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatatttaacatgtttggtttggcttttcaaaa 30018872  T
Q  272 tagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30018873 tagcttttatcctccaaaagcaattctagttgaagctacaattcctatcttcttactttcctagaatcaattctacaccctcaattctattaattccatc 30018972  T
Q  372 cctgccctcattaatttttctaacccttct 401  Q
    |||| |||||||||||||||||||||||||    
T  30018973 cctgtcctcattaatttttctaacccttct 30019002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 398 - 510
Target Start/End: Original strand, 30019762 - 30019874
Alignment:
Q  398 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 497  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30019762 ttctatttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaa 30019861  T
Q  498 ttctgcattattg 510  Q
    |||||||||||||    
T  30019862 ttctgcattattg 30019874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 501
Target Start/End: Original strand, 4147374 - 4147473
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||||| ||||||  |||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4147374 atttatttttatttagttatgtctattttagtaattatacattcaagagcaattttgatcaaaactatccaaacaacattcattctgtttaatcaattct 4147473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 402 - 501
Target Start/End: Original strand, 27825541 - 27825640
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  27825541 atttatttgtatttagctatgtccattttaataattatacatttaaaagtaattttgatcaaaactatccaaacaacattcattctatttaatcaattct 27825640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 31745564 - 31745467
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    |||||||| |||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  31745564 atttatttttatttagctatgtccattttagtaattatacattcaaaagcaattttgatcaaaactatccaaacaacatttattctgtttaatcaatt 31745467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 510
Target Start/End: Original strand, 10683721 - 10683819
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||| |||||||||||||||    
T  10683721 atttagctatgtccattttagtaattatacattcaaaagaaattttgataaaaactatccaaacaacattcagtttgtttaattaattctgcattattg 10683819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 510
Target Start/End: Complemental strand, 21515250 - 21515147
Alignment:
Q  406 atttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcat 505  Q
    |||| |||||| ||||||| || || ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||||||    
T  21515250 atttctatttagctatgtccatattagtaattatacattcaaaagcaattttgat-aaaactatccaaacaacattcagtttgtttaatcaattctgcat 21515152  T
Q  506 tattg 510  Q
    |||||    
T  21515151 tattg 21515147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 403 - 510
Target Start/End: Complemental strand, 20838063 - 20837956
Alignment:
Q  403 tttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctg 502  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||| |||||||||||||| ||| ||||||||| ||| | | ||||||||||| ||    
T  20838063 tttatttgtatttaactatgtccattttagtaattatatgttcaaaagcaattttgatcaaaattattcaaacaacattcaatttatttaatcaattatg 20837964  T
Q  503 cattattg 510  Q
    ||||||||    
T  20837963 cattattg 20837956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 358
Target Start/End: Complemental strand, 31746357 - 31746179
Alignment:
Q  178 tgtttggtttggcttttgcaaagccagaatcaattctggagcatttcaaaagcaattctgcaatattt-aacatgtttggtttggcttttcaaaatagct 276  Q
    |||||||||||||||||| | |   |||| |||||||  | | |||||||||||||||| ||| |||  || |||||||||||| ||||||||||| |||    
T  31746357 tgtttggtttggcttttgtaca---agaagcaattctacaacttttcaaaagcaattctacaacattccaatatgtttggtttgacttttcaaaattgct 31746261  T
Q  277 tttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctacaccctcaattc 358  Q
    | ||||||||||||||||||||   |  |||||||||||||| ||| |  |||| ||||||||||||||||| |||||||||    
T  31746260 tctatcctccaaaagcaattctccatatagctacaattcctaacttatggcttttctagaatcaattctacatcctcaattc 31746179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 4146810 - 4146907
Alignment:
Q  248 catgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    ||||||||||||||||||||| ||| |||| || || |||||||||||||| | ||||||||||||||||||||| | | ||  ||||||||||||||    
T  4146810 catgtttggtttggcttttcagaattgcttctaccccccaaaagcaattctggatgaagctacaattcctagcttttgagttaactagaatcaattct 4146907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 498
Target Start/End: Original strand, 921607 - 921688
Alignment:
Q  416 aactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaat 498  Q
    |||||| || |||||  ||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  921607 aactatatccattttaataattatacattcaaaaataattttgatc-aaactatccaaacaacatccattctgtttaatcaat 921688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 479
Target Start/End: Complemental strand, 29409399 - 29409348
Alignment:
Q  428 tttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||| ||||||||||||||| ||||||||||  |||||||||||||||||    
T  29409399 tttggtcattatacattcaaaattaattttgattcaaactatccaaacaaca 29409348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 348
Target Start/End: Complemental strand, 21517455 - 21517357
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| | || |||||||||||||||||| |   ||||||||||| ||||||||| |  ||||  ||||||||||||||||    
T  21517455 tgtttggtttgacttttaagaattgattctatcctccaaaagcaattatccatgaagctacaaatcctagcttttggcttttgtagaatcaattctaca 21517357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 477
Target Start/End: Original strand, 29682119 - 29682169
Alignment:
Q  427 ttttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaa 477  Q
    ||||||||||||||| |||||||||||||||||||  ||| ||||||||||    
T  29682119 ttttggtaattataccttcaaaagtaattttgatctcaaccatccaaacaa 29682169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 479
Target Start/End: Original strand, 13739159 - 13739210
Alignment:
Q  428 tttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||| ||| ||||||||||| ||||||||||  |||||||||||||||||    
T  13739159 tttggtcattttacattcaaaattaattttgattcaaactatccaaacaaca 13739210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 479
Target Start/End: Original strand, 13744659 - 13744710
Alignment:
Q  428 tttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||| ||| ||||||||||| ||||||||||  |||||||||||||||||    
T  13744659 tttggtcattttacattcaaaattaattttgattcaaactatccaaacaaca 13744710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 322
Target Start/End: Original strand, 30134180 - 30134219
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagctt 322  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  30134180 ctccaaaagcaattctggttgaagctacaatttctagctt 30134219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 365591 - 365689
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||||||||| ||||| | ||| | || |||| ||||||||||||| |  || ||||||||| ||||| ||||| ||||| ||||| |||||| ||||    
T  365591 tgtttggtttgacttttaagaattgattctatcatccaaaagcaattatccttaaagctacaaatcctaacttctaacttttctagactcaattttaca 365689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 477
Target Start/End: Complemental strand, 16122150 - 16122100
Alignment:
Q  427 ttttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaa 477  Q
    |||| |||||||||| |||||||| ||||||||||  ||||||||||||||    
T  16122150 tttttgtaattataccttcaaaagcaattttgatctcaactatccaaacaa 16122100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 20838560 - 20838498
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||||| ||||||||||||| ||||| ||| | | ||| ||| ||||||||||    
T  20838560 ctccaaaagcaattctggttgaagctacaaatcctaacttttgagtttactataatcaattct 20838498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 27825057 - 27825119
Alignment:
Q  283 ctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattct 345  Q
    |||||||||||||| | ||||||||||||||||||| ||| | | ||  ||||||||||||||    
T  27825057 ctccaaaagcaattatggttgaagctacaattcctaacttttcagttaactagaatcaattct 27825119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 21255028 - 21254975
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||| |||||||| |||||||||  |||||| | ||||||||    
T  21255028 attttggtaattatactttcaaaagcaattttgattcaaactaccgaaacaaca 21254975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 510
Target Start/End: Complemental strand, 9332 - 9224
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||| ||||  |||||||||||||||||||||||||||| ||| | ||||||||||||| |    
T  9332 atttatttgtatttagctatgtccattttagtaattatacatttaaaatcaattttgatcaaaactatccaaacaacattcagtttgtttaatcaattat 9233  T
Q  502 gcattattg 510  Q
    |||||||||    
T  9232 gcattattg 9224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 412 - 510
Target Start/End: Complemental strand, 32609 - 32511
Alignment:
Q  412 atttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattctgcattattg 510  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  32609 atttagctatgtccattttagtaattatacattcaaaagcaattttgataaaaactatccaaacaacattcattttgtttaatcaattatgcattattg 32511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 38252 - 38360
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    ||||| ||| ||||| ||||||| ||||| ||||||| ||||||||||| ||||||||| ||||||||| |||||||| ||| | |||||||||||||||    
T  38252 atttacttgaatttagctatgtccattttagtaattaaacattcaaaagcaattttgataaaaactatcgaaacaacattcagtttgtttaatcaattct 38351  T
Q  502 gcattattg 510  Q
    |||||||||    
T  38352 gcattattg 38360  T

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Target: scaffold0068; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 37697 - 37791
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattcta 346  Q
    ||||||||||||||||| | ||| | || |||||||||||| ||||| |  || ||||||||| |  ||||||||  |||| |||||||||||||||    
T  37697 tgtttggtttggcttttaagaattgattctatcctccaaaaacaattatcctttaagctacaaat--tagcttctagcttttctagaatcaattcta 37791  T

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Target: scaffold0006 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 92086 - 92196
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgat--caaaactatccaaacaacaatcattctgtttaatcaatt 499  Q
    ||||| ||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||   |||||||||| ||||||| | | | |||||||||||||    
T  92086 atttacttgaatttaactatgtccattttagtaattatacattcaaaagcaattttgataaaaaaactatcctaacaacatttagtttgtttaatcaatt 92185  T
Q  500 ctgcattattg 510  Q
    |||||||||||    
T  92186 ctgcattattg 92196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 91535 - 91634
Alignment:
Q  251 gtttggtttggcttttcaaaatagcttttatcctccaaaagca--attctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    |||||||||||||||| | ||| | || |||||||||||||||  |||||| || ||||||||||||||| ||| |  ||||| |||||  |||||||||    
T  91535 gtttggtttggctttttagaattgattctatcctccaaaagcaatattctacttaaagctacaattcctaacttttggctttcatagaacaaattctaca 91634  T

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Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 402 - 508
Target Start/End: Complemental strand, 301823 - 301717
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaacaatcattctgtttaatcaattct 501  Q
    |||||| ||||||||| ||||||  |||| ||| ||||||||||||||  |||||||||||||||||||||||||||| |||   ||||||||||||| |    
T  301823 atttatatgtatttaattatgtcggttttagtacttatacattcaaaaacaattttgatcaaaactatccaaacaacattcaacgtgtttaatcaatttt 301724  T
Q  502 gcattat 508  Q
    |||||||    
T  301723 gcattat 301717  T

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Target: scaffold0069 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 17360 - 17471
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgat---caaaactatccaaacaacaatcattctgtttaatcaat 498  Q
    ||||| ||| ||||||||||||| ||||| ||||||||| ||||||||  |||||||||    |||||||||| ||||||| | | | ||||||||||||    
T  17360 atttacttgaatttaactatgtccattttagtaattatatattcaaaaacaattttgataaaaaaaactatccgaacaacatttagtttgtttaatcaat 17459  T
Q  499 tctgcattattg 510  Q
    ||||||||||||    
T  17460 tctgcattattg 17471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 16815 - 16883
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattccta 318  Q
    ||||||||||||||||| | ||| | || ||||||||||||||||||||| || |||||||||||||||    
T  16815 tgtttggtttggctttttagaattgattctatcctccaaaagcaattctaattaaagctacaattccta 16883  T

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Target: scaffold0808 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 510
Target Start/End: Original strand, 4636 - 4745
Alignment:
Q  402 atttatttgtatttaactatgtctattttggtaattatacattcaaaagtaattttgat-caaaactatccaaacaacaatcattctgtttaatcaattc 500  Q
    ||||| ||| ||||| ||||||| ||||  ||||||||||||||||||| |||||||||  |||| ||||||||||||  |||   ||||||||||||||    
T  4636 atttacttgaatttagctatgtccatttcagtaattatacattcaaaagaaattttgataaaaaaatatccaaacaacgttcagcttgtttaatcaattc 4735  T
Q  501 tgcattattg 510  Q
    | ||||||||    
T  4736 tacattattg 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 4090 - 4188
Alignment:
Q  250 tgtttggtttggcttttcaaaatagcttttatcctccaaaagcaattctagttgaagctacaattcctagcttcttactttcctagaatcaattctaca 348  Q
    ||||| ||||||||||| | ||| | || ||||||| |||||||||| |  || |||||| || |||||||||||  |||| ||| |||||||||||||    
T  4090 tgtttagtttggcttttaagaattgattctatcctcgaaaagcaattatcattaaagctaaaaatcctagcttctagcttttctaaaatcaattctaca 4188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 46714 - 46767
Alignment:
Q  426 attttggtaattatacattcaaaagtaattttgatcaaaactatccaaacaaca 479  Q
    |||||||||||||||||| |||||  |||||||||   ||||||||||||||||    
T  46714 attttggtaattatacatccaaaatcaattttgatttgaactatccaaacaaca 46767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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