View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4684_high_7 (Length: 303)
Name: NF4684_high_7
Description: NF4684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4684_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 44039287 - 44038997
Alignment:
| Q |
1 |
tgtaatgcacacagaaacacactcaaataagaaacgatccaaaacacgtcaaaagtgaactaaagtaattttcaagtctaaacttttgtaga---gaatc |
97 |
Q |
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| T |
44039287 |
tgtaatgcacacagaaacacactcaaataagaaacgatccaaaacacgtcaaaagtgaactaaagtaattttcaagtctaaacttttgtagaagagaatc |
44039188 |
T |
|
| Q |
98 |
tattcatcaataacggagagaattgaagcagttagttccttt-atcttatttggattttctctaacccactactaaaacatgcattggttatgtgaacta |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44039187 |
tattcatcaataacggagagaattgaagcagttagttccttttatcttatttgtattttctctaacccactactaaaacatgcattggttatgtgaacta |
44039088 |
T |
|
| Q |
197 |
gagaaagcacgctcatgctctttcgaaggttgaaagctcttttaaatccgaagattctggtttgcgtttgtaaccctctgtatttgttatt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44039087 |
gagaaagcacgctcatgctctttcgaaggttgaaagctcttttaaatccgaagattctggtttgcgtttgtaaccctctgtatttgttatt |
44038997 |
T |
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